Metagenome / Metatranscriptome Family F065498

Basic Information
Family ID	F065498
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	62 residues
Representative Sequence	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLWLGQREALVPGRRALVRSRDT
Number of Associated Samples	110
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.89 %
% of genes near scaffold ends (potentially truncated)	23.62 %
% of genes from short scaffolds (< 2000 bps)	78.74 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (96.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.811 % of family members)
Environment Ontology (ENVO)	Unclassified (30.709 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.520 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01425	Amidase	53.54
PF01966	HD	25.98
PF01551	Peptidase_M23	3.15
PF03330	DPBB_1	1.57
PF00477	LEA_5	1.57
PF01523	PmbA_TldD	0.79
PF00155	Aminotran_1_2	0.79
PF00903	Glyoxalase	0.79
PF04203	Sortase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	53.54
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.79
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.28 %
Unclassified	root	N/A	3.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	31.50 %
Unclassified	root	N/A	3.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	29.13 %
Unclassified	root	N/A	3.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.13 %
Unclassified	root	N/A	3.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.13 %
Unclassified	root	N/A	3.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0778253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2749	Open in IMG/M
3300001661\|JGI12053J15887_10132054	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300004156\|Ga0062589_100936156	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300004643\|Ga0062591_100886086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300005093\|Ga0062594_100711603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300005166\|Ga0066674_10007332	All Organisms → cellular organisms → Bacteria	4421	Open in IMG/M
3300005172\|Ga0066683_10198456	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005293\|Ga0065715_10001274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9617	Open in IMG/M
3300005294\|Ga0065705_10234413	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300005330\|Ga0070690_100543665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300005336\|Ga0070680_100741659	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005341\|Ga0070691_10078201	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300005343\|Ga0070687_100964720	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005344\|Ga0070661_100537414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	939	Open in IMG/M
3300005345\|Ga0070692_10001106	All Organisms → cellular organisms → Bacteria	9409	Open in IMG/M
3300005353\|Ga0070669_101314828	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005440\|Ga0070705_100526981	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005444\|Ga0070694_100573701	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005444\|Ga0070694_101277029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300005445\|Ga0070708_100849578	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005445\|Ga0070708_101225900	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005446\|Ga0066686_10304737	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005457\|Ga0070662_100988618	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005518\|Ga0070699_101022683	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005540\|Ga0066697_10073034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1972	Open in IMG/M
3300005549\|Ga0070704_101024295	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005559\|Ga0066700_10630071	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006031\|Ga0066651_10044417	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300006032\|Ga0066696_10591781	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300006049\|Ga0075417_10001280	All Organisms → cellular organisms → Bacteria	6819	Open in IMG/M
3300006049\|Ga0075417_10070590	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300006049\|Ga0075417_10103776	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300006852\|Ga0075433_10342058	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300006854\|Ga0075425_100749376	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300006871\|Ga0075434_100395671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1403	Open in IMG/M
3300006876\|Ga0079217_10053702	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300006876\|Ga0079217_11600196	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006880\|Ga0075429_101655843	Not Available	556	Open in IMG/M
3300006894\|Ga0079215_10340182	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300006903\|Ga0075426_10033114	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300006918\|Ga0079216_10506775	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300007004\|Ga0079218_10386098	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300007004\|Ga0079218_10534563	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300007004\|Ga0079218_12241034	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009089\|Ga0099828_10068191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3004	Open in IMG/M
3300009148\|Ga0105243_10349917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1356	Open in IMG/M
3300010333\|Ga0134080_10055896	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300010333\|Ga0134080_10708051	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010373\|Ga0134128_13039524	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010400\|Ga0134122_11064088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300012206\|Ga0137380_10272606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1521	Open in IMG/M
3300012226\|Ga0137447_1088822	Not Available	606	Open in IMG/M
3300012349\|Ga0137387_10108662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1942	Open in IMG/M
3300012351\|Ga0137386_11183990	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012354\|Ga0137366_10220628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1411	Open in IMG/M
3300012360\|Ga0137375_11271961	Not Available	558	Open in IMG/M
3300012912\|Ga0157306_10266322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300012944\|Ga0137410_11122478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300017654\|Ga0134069_1319545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300017997\|Ga0184610_1215358	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300018000\|Ga0184604_10056783	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300018028\|Ga0184608_10001212	All Organisms → cellular organisms → Bacteria	7452	Open in IMG/M
3300018031\|Ga0184634_10002202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5980	Open in IMG/M
3300018051\|Ga0184620_10206219	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300018056\|Ga0184623_10003493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6724	Open in IMG/M
3300018056\|Ga0184623_10322704	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300018063\|Ga0184637_10282630	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300018071\|Ga0184618_10043721	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300018071\|Ga0184618_10065202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1360	Open in IMG/M
3300018075\|Ga0184632_10490010	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018076\|Ga0184609_10029848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2233	Open in IMG/M
3300018077\|Ga0184633_10177776	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300018079\|Ga0184627_10637461	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300019255\|Ga0184643_1327028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300019269\|Ga0184644_1016659	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300020003\|Ga0193739_1017427	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300021073\|Ga0210378_10132015	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300021078\|Ga0210381_10091067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	978	Open in IMG/M
3300021080\|Ga0210382_10006662	All Organisms → cellular organisms → Bacteria	3797	Open in IMG/M
3300021080\|Ga0210382_10049362	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300021080\|Ga0210382_10243356	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300022534\|Ga0224452_1118549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300025119\|Ga0209126_1127070	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300025885\|Ga0207653_10000157	All Organisms → cellular organisms → Bacteria	48136	Open in IMG/M
3300025907\|Ga0207645_10325808	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300025910\|Ga0207684_10000013	All Organisms → cellular organisms → Bacteria	443468	Open in IMG/M
3300025910\|Ga0207684_10379802	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025917\|Ga0207660_10147031	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300025922\|Ga0207646_10001158	All Organisms → cellular organisms → Bacteria	33510	Open in IMG/M
3300025922\|Ga0207646_10406597	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300025933\|Ga0207706_10954006	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300025936\|Ga0207670_10257576	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300025981\|Ga0207640_10724445	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300026075\|Ga0207708_10078619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2533	Open in IMG/M
3300026116\|Ga0207674_10261005	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300026314\|Ga0209268_1006142	All Organisms → cellular organisms → Bacteria	5217	Open in IMG/M
3300026320\|Ga0209131_1069811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1922	Open in IMG/M
3300026327\|Ga0209266_1207962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300026536\|Ga0209058_1212461	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300026548\|Ga0209161_10020741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4716	Open in IMG/M
3300026548\|Ga0209161_10133126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1455	Open in IMG/M
3300027526\|Ga0209968_1053466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300027546\|Ga0208984_1135592	Not Available	529	Open in IMG/M
3300027637\|Ga0209818_1075124	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300027655\|Ga0209388_1098056	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300027669\|Ga0208981_1009119	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300027695\|Ga0209966_1138926	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300027717\|Ga0209998_10086602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300027846\|Ga0209180_10394246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	785	Open in IMG/M
3300027873\|Ga0209814_10006894	All Organisms → cellular organisms → Bacteria	4390	Open in IMG/M
3300027873\|Ga0209814_10081632	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300027875\|Ga0209283_10067793	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300027961\|Ga0209853_1022988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1875	Open in IMG/M
3300028380\|Ga0268265_10627706	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300028715\|Ga0307313_10064071	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300028796\|Ga0307287_10379397	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028814\|Ga0307302_10186038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1012	Open in IMG/M
3300028819\|Ga0307296_10019785	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300028828\|Ga0307312_10087079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1919	Open in IMG/M
3300028878\|Ga0307278_10007349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5213	Open in IMG/M
3300028881\|Ga0307277_10029475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2178	Open in IMG/M
3300028881\|Ga0307277_10067826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1476	Open in IMG/M
3300028884\|Ga0307308_10022365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2910	Open in IMG/M
3300031965\|Ga0326597_10021785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8272	Open in IMG/M
3300032180\|Ga0307471_100270110	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300033811\|Ga0364924_079503	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300034773\|Ga0364936_033638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.89%
Host-Associated	Host-Associated	18.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.78%
Aquatic	Environmental → Aquatic	18.11%
Plants	Host-Associated → Plants	18.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.20%
Sediment	Environmental → Aquatic → Sediment	12.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.60%
Freshwater	Environmental → Aquatic → Freshwater	5.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.51%
Floodplain	Environmental → Terrestrial → Floodplain	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.52%
Loam	Environmental → Terrestrial → Soil → Loam	18.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.66%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.57%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.66%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.36%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.30%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.36%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07782531	3300000033	Soil	RSRVTGCGCLLLIAALVGLIVFMIFGSTDPGEPIESAVALFLLLWLAERETLVPRSSALVRSRDT*
JGI12053J15887_101320542	3300001661	Forest Soil	VTGCGCLLLIAALVGLIAFMVFGSTDPGAPIETAVALLLVLWLGQRQTLVPRRRVLVRSRDA*
Ga0062589_1009361562	3300004156	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTFVRSRDT*
Ga0062591_1008860862	3300004643	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRPLVRSRDT*
Ga0062594_1007116032	3300005093	Soil	IAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTFVRSRDT*
Ga0066674_100073321	3300005166	Soil	VTGCGCVLLIAALVGLILFLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA*
Ga0066683_101984562	3300005172	Soil	VTGCGCLLLIAALIGLIALLVFGSTDPGEPIETAVALLVLLWSGQRQAFVPGRRVLVRSGNA*
Ga0065715_100012743	3300005293	Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAXALFLLLWLAQRETLVPRGRALVRSRDT*
Ga0065705_102344132	3300005294	Switchgrass Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRALVRSRDT*
Ga0070690_1005436651	3300005330	Switchgrass Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPR
Ga0070680_1007416592	3300005336	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLSLGQREALVPGRRALVRSRDT*
Ga0070691_100782012	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLLLGQREALVPGRRALVRSRDT*
Ga0070687_1009647201	3300005343	Switchgrass Rhizosphere	ARSRVTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRGRALVRSRDT*
Ga0070661_1005374141	3300005344	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTFVRSRDTQ
Ga0070692_100011063	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRGRALVRSRDT*
Ga0070669_1013148282	3300005353	Switchgrass Rhizosphere	LLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRCRALVRSRDT*
Ga0070705_1005269812	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVIFLGQRLALVPGRRVLVRSGDAEE*
Ga0070694_1005737012	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLVIVALVGLIVFMMFGSTDSGEPIESAVALFLLLLLAERETLVPRRRLLVRSRDT*
Ga0070694_1012770291	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRSGDAQE*
Ga0070708_1008495782	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRARDA*
Ga0070708_1012259001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RVTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRCRALVRSRDT*
Ga0066686_103047372	3300005446	Soil	VTGCGCLLLIGALVGLIVLLIFGSTDPGEPIETAVALFALLWSGKRQAFVPRRHVLVGTRDA*
Ga0070662_1009886182	3300005457	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALVLLLWLAQRETLVPRRRTFVRSRDT*
Ga0070699_1010226832	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLWLGQREALVPGRRALVRSRDT*
Ga0066697_100730342	3300005540	Soil	VTGCGCVLLIAALVGLIFFLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA*
Ga0070704_1010242951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRCRALVRSRDT*
Ga0066700_106300712	3300005559	Soil	RSGVTGCGCVLLIAALVGLILFLIFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA*
Ga0066651_100444172	3300006031	Soil	VTGCGCVLLIAALVGLILFLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRGA*
Ga0066696_105917811	3300006032	Soil	VTGCGCVLLIAALVGLILFLIFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVL
Ga0075417_100012808	3300006049	Populus Rhizosphere	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLMSLGERLSLVPRRRALVRARDA*
Ga0075417_100705902	3300006049	Populus Rhizosphere	VTGCGCLLLIAALVGLIVFLIFGSTDPGEPIESAVALLLLLLLGQRQTFVPRRGLLVRARDA*
Ga0075417_101037762	3300006049	Populus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDTGEPIESAVALLLLLWLTERETLVPRRRALVRSRDT*
Ga0075433_103420582	3300006852	Populus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRSGDAEE*
Ga0075425_1007493762	3300006854	Populus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRTGDAQE*
Ga0075434_1003956713	3300006871	Populus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTLVRSRDT*
Ga0079217_100537022	3300006876	Agricultural Soil	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLVLLGERLSLVPRRRVLVRTRDV*
Ga0079217_116001961	3300006876	Agricultural Soil	GVTGCGCVLLIAFLVGLIVLLIFGSTDPGEPIETAAALLALLLLGERQALVPLGRALVRARGA*
Ga0075429_1016558431	3300006880	Populus Rhizosphere	VTGCGCVLLIAFLVGIIVFLIFGSTDPGEPIETAVALSLLLWLGQRQTLVPGRRVLVRPRHP*
Ga0079215_103401822	3300006894	Agricultural Soil	VTGCGCLLLIAAIVGLIVFMIFGSTDAGEPVETAAALLLLVLLGKRLALVPRRRVLVRTRDA*
Ga0075426_100331142	3300006903	Populus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVMSLGQRLALVPGRRVLVRSGDAQE*
Ga0079216_105067751	3300006918	Agricultural Soil	ARSRVTGCGCLLLIAAIVGLIVLMIFGSTDAGEPIETAAALLLLVLLGERLSLVPRRRVLVRTRDV*
Ga0079218_103860982	3300007004	Agricultural Soil	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPIETAAALLLLVLLGERLSLVPRRRVLVRTRDA*
Ga0079218_105345632	3300007004	Agricultural Soil	VTGCGCLLLIAAIVGLIVFMIFGSTDAGEPIDTAVALLLLLLLGQRQALVPRRRLLIRARDA*
Ga0079218_122410342	3300007004	Agricultural Soil	VTGCGCLLAIAVIVGLIVFMIFGSTDAGAPTETAVAVLLALLLGERLALVPLRRVLVRARDA*
Ga0099828_100681911	3300009089	Vadose Zone Soil	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVMSLGQRLALVPGRRVLVRSGGA*
Ga0105243_103499171	3300009148	Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAAALLLMWLAQRETLVPRRRALVRSRDT*
Ga0134080_100558962	3300010333	Grasslands Soil	IGALVGLIVLLIFGSTDSGEPIETAVALFALLWSGKRQAFVPRRHVLVGTRDA*
Ga0134080_107080512	3300010333	Grasslands Soil	VTGCGCLLLIAALIGLIALLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLIGSRDA*
Ga0134128_130395241	3300010373	Terrestrial Soil	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAAALLLIWLAQRETLVPRRRALVRSRDT*
Ga0134122_110640881	3300010400	Terrestrial Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALFLMWLAQRETLVPRRRALVRSRDT*
Ga0137380_102726063	3300012206	Vadose Zone Soil	VTGCGCLLLIAALVGLIALLVFGSTDPGEPIETAVALLVLLWSGQRQAFVPGCRVFVRSGNA*
Ga0137447_10888222	3300012226	Soil	VTGCGCLLLIAAIVGLIVFLIFGSTDAGEPIETAVALLLLLLLGQRPALVPRRRVFVRARDA*
Ga0137387_101086624	3300012349	Vadose Zone Soil	VTGCGCLLLIAALVGLIALLVFGSTDPGEPIETAVALLVLLWSGQRQAFVPGRRVFVRSGNA*
Ga0137386_111839901	3300012351	Vadose Zone Soil	GVTGCGCVLLIAALVGLILFLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA*
Ga0137366_102206281	3300012354	Vadose Zone Soil	VTGCGCLLLIGALVGLIVLLIFGSTDPGEPIETAVALLALLWSGQRQAFVPRRHVLVGTRDS*
Ga0137375_112719611	3300012360	Vadose Zone Soil	VTGCGCLLIIAMLVGLIVFLIFGSTDPGEPIESAVALLVVLWSAERQALVPARRALVRSRDA*
Ga0157306_102663221	3300012912	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALLLLLWLAQRETLVPRRRAL
Ga0137410_111224782	3300012944	Vadose Zone Soil	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVMSLGQRLALVPGRRVLVRSGDA*
Ga0134069_13195451	3300017654	Grasslands Soil	VTGCGCLLLIAALVGLIALLVFGSTDPGEPTQTAVALLVLLWSGQRQAFVPGRR
Ga0184610_12153582	3300017997	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWSGQRQPFVPRGRALIGARDA
Ga0184604_100567831	3300018000	Groundwater Sediment	SRVTGCGCLLLIAALVGLIVFMIFGSTDSGAPIETAVALFLLMWLAQREALVPRRRALVGSRDT
Ga0184608_100012128	3300018028	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDAGEPIETAVALFLLVWLAQREALVPRRRALVRSRDA
Ga0184634_1000220210	3300018031	Groundwater Sediment	VTGCGCLLLITAIVGLIVFLIFGSTDAGEPIETAVALFLLMLLGQRLAFVPRRRMLVRARDA
Ga0184620_102062192	3300018051	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQREALVPRRRALVGSRDT
Ga0184623_100034935	3300018056	Groundwater Sediment	VTGCGCLLLIAAIVGLIVFLIFGSTDAGEPIETAAALLLLVLLGQRLALVPRRRVLVRARDA
Ga0184623_103227042	3300018056	Groundwater Sediment	VTGCGCVLLIAAIVGLIVFLIFGSTDAGEPIETAVALFLLLLGQRLALVPRRRMLVRARD
Ga0184637_102826302	3300018063	Groundwater Sediment	VTGCGCLLLIAAIVGLIVFLIFGSTDAGEPIETAVALLLLMLLGQRLALVPRRRMLVRARDA
Ga0184618_100437212	3300018071	Groundwater Sediment	VTGCGCLLVVAALVGLIVFMVFGSTDPGEPIETAVALLLVLWLGERQALVPRRRVLVRPRDA
Ga0184618_100652022	3300018071	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALSLLVWLAQRETLVPRRRALVRSRNT
Ga0184632_104900102	3300018075	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPISSAVMLFVLLWLAQRETLVPRRRALVRSRDT
Ga0184609_100298482	3300018076	Groundwater Sediment	VTGCGCLLLIAAIVGLIVFMIFGSTDSGEPVETAAALLLLVLLGQRSAFVPLRRVLVRARDA
Ga0184633_101777762	3300018077	Groundwater Sediment	LLIAALVGLNVFLIFGSTDSGEPIETAVALLLVLWLGKRLALVPRRRSFVRPRDP
Ga0184627_106374612	3300018079	Groundwater Sediment	VTGCGCILLIAAIVGLIVFLIFGSTDAGEPIETAAALLLLVLLGQRLALVPRRRSFVRPRDT
Ga0184643_13270281	3300019255	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALFLLLWLAQRQPLVPRRRALVRSR
Ga0184644_10166592	3300019269	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIDSAVALLLLLWLAQWETLVPRRRALVRSRDT
Ga0193739_10174272	3300020003	Soil	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLVLLGQRLAFVPLRRVLVRARDA
Ga0210378_101320152	3300021073	Groundwater Sediment	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLALLGQRLAFMPLRGLLVRARDA
Ga0210381_100910671	3300021078	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLMWLAQREALVPRRRALVGSRDT
Ga0210382_100066622	3300021080	Groundwater Sediment	VTGCGCLLLIAALVGLILFMIFGSTDPGAPIETAVALLLVLSLGQGQTLVPRRRILVRARDA
Ga0210382_100493621	3300021080	Groundwater Sediment	GCLLLIAALVGLIVFMIFGSTDSGEPIETAVALSLLVWLAQRETLVPRRRALVRSRNT
Ga0210382_102433562	3300021080	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAERETLVPRRRALVRSRDT
Ga0224452_11185492	3300022534	Groundwater Sediment	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAERETLVPRRRALIRSREA
Ga0209126_11270702	3300025119	Soil	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPIEAAAALLLLALLGQRLALMPRRRVLVRARDA
Ga0207653_1000015718	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRGRALVRSRDT
Ga0207645_103258082	3300025907	Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTFVRSRDT
Ga0207684_1000001345	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLIIAALVGLGVFLIFGSTDPGEPIETAVALFAALSLGQRLALVPGRRMLVRARRA
Ga0207684_103798022	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRARDA
Ga0207660_101470313	3300025917	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLSLGQREALVPGRRALVRSRDT
Ga0207646_1000115811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVISLGQRLALVPGRRVLVRSGDAQE
Ga0207646_104065972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFLIFGSTDPGEPIETAAALLAASLLMERQSLVPLRRALVGAGGA
Ga0207706_109540062	3300025933	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALVLLLWLAQRETLVPRRRTFVRSRDT
Ga0207670_102575762	3300025936	Switchgrass Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRALVRSRDT
Ga0207640_107244452	3300025981	Corn Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRRRALVRSRD
Ga0207708_100786191	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDPGEPIETAVALFLLLLLGQREALVPGRRALVRSRDT
Ga0207674_102610052	3300026116	Corn Rhizosphere	VTGCGCLLLIAALAGLIVFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRTFVRSRDT
Ga0209268_10061425	3300026314	Soil	VTGCGCVLLIAALVGLILFLVFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRD
Ga0209131_10698112	3300026320	Grasslands Soil	VTGCGCLILIAVLVGLIVFMVFGSTDAGAPIESAVALLVLVLLAERVALVPRRRALVGSRDA
Ga0209266_12079622	3300026327	Soil	VTGCGCLLLIAALIGLIALLVFGSTDPGEPIETAVALLVLLWSGQRQAFVPGRRVLVRS
Ga0209058_12124612	3300026536	Soil	VTGCGCLLLIGALVGLIVLLVFGSTDPGEPIETAVALLALLWSGQRQAFVPGRHALVRARNA
Ga0209161_100207416	3300026548	Soil	CVLLIAALVGLILFLIFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA
Ga0209161_101331263	3300026548	Soil	VLLIAALVGLILFLIFGSTDPGEPIETAVALLLLLSGQRLALVPGRGVLVGSRDA
Ga0209968_10534662	3300027526	Arabidopsis Thaliana Rhizosphere	VTGCGCLLLIAAIVGLIVFMIFGSTDAGEPIDTAVALLLLLLLGQRQALVPRRRVLVRPRDA
Ga0208984_11355922	3300027546	Forest Soil	VTGCGCLFLIAALVGLILFMIFGSTDPGAPIETAVALLLGVWLGQRQTLVPRRRALVGSRDT
Ga0209818_10751242	3300027637	Agricultural Soil	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLVLLGERLSLVPRRRVLVRTRDV
Ga0209388_10980562	3300027655	Vadose Zone Soil	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVMSLGQRLALVPGRRVLVRSGDA
Ga0208981_10091196	3300027669	Forest Soil	VTGCGCLLLIAALVGLIAFMVFGSTDPGAPIETAVALIPALWLGQRQTLVPRRRVLVRSRDA
Ga0209966_11389261	3300027695	Arabidopsis Thaliana Rhizosphere	ARSRVTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRCRALVRSRDT
Ga0209998_100866021	3300027717	Arabidopsis Thaliana Rhizosphere	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIETAAALILIWLAQRETLVPRCRALVRSRD
Ga0209180_103942462	3300027846	Vadose Zone Soil	VTGCGCLLLIAALVGLGVFLIFGSTDTGEPIETAVALLAVMSLGQRLALVPGRRALVRSG
Ga0209814_100068942	3300027873	Populus Rhizosphere	VTGCGCLLLIAAIVGLIVLMIFGSTDAGEPVETAAALLLLMSLGERLSLVPRRRALVRARDA
Ga0209814_100816322	3300027873	Populus Rhizosphere	VTGCGCLLLIAALVGLIVFLIFGSTDPGEPIESAVALLLLLLLGQRQTFVPRRGLLVRARDA
Ga0209283_100677933	3300027875	Vadose Zone Soil	VPVTGCGCLLLIAAIVGLIVFLVFGSTDPGEPIEAAAALAAASLLMERQALVPLRRALVRARRA
Ga0209853_10229883	3300027961	Groundwater Sand	VTGCGCLLFIAALVGLIAVLIFGSTDPGEPIETAVALLLVLWLGQRQALVPRRRALVRSGDA
Ga0268265_106277062	3300028380	Switchgrass Rhizosphere	VTGCGCLLLIAALVGLIIFMIFGSTDSGEPIETAVALFLLLWLAQRETLVPRRRALVRSRDT
Ga0307313_100640712	3300028715	Soil	VTGCGCVLVVAALVGLIIFMVFGSTDPGEPIETTLALLLVLWLGERQALVPRRRVLVCPRDAQQQSLAPRPRGEL
Ga0307287_103793972	3300028796	Soil	LLLIAAIVGLIILMIFGSTDAGEPIETAAALFLLVLLGQRLSLVPRRRVLVGARHA
Ga0307302_101860382	3300028814	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALFLLLWLVERETLVPRRRALVRSRDA
Ga0307296_100197855	3300028819	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALFLLLWLAERKTLVPRRRALVRSRDA
Ga0307312_100870792	3300028828	Soil	VTGCGCVLVVAALVGLIIFMVFGSTDPGEPIETALALLLVLWLGERQALVPRRRVLVCPRDAQQQSLAPRPRGEL
Ga0307278_100073495	3300028878	Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALFLLLWLAQRQPLVPRRRALVRSRDT
Ga0307277_100294755	3300028881	Soil	VTGCGCLLVVAALVGLIVFMVFGSTDPGAPIETAVALLLVLWLGERQALVPRRRALVRPRDA
Ga0307277_100678261	3300028881	Soil	LVGLIVFMVFGSTDPGAPIETAVALLLVLWLGERQALVPRRRTLVRPRDA
Ga0307308_100223654	3300028884	Soil	VTGCGCVLVVAAIVGLIIFMVFGSTDPGEPIETALALLLVLWLGERQALVPRRRVLVCPRDAQQQSLAPRPRGEL
Ga0326597_1002178510	3300031965	Soil	VTGCGCLLLIAALVGLGVFLIFGSTDPGEPIEAAVALSLLLWLGQRLSLVPGRRVLVRSRDP
Ga0307471_1002701102	3300032180	Hardwood Forest Soil	VTGCGCLLLIAALVGLIVFMIFGSTDSGEPIESAVALFLLLWLAERESLVPLRRALIRPRDA
Ga0364924_079503_340_528	3300033811	Sediment	VTGCGCLLLIAAIVGLIVFLIFGSTDAGEPIETAVALFLLILLGQRLALVPRRRVLVRARHA
Ga0364936_033638_633_821	3300034773	Sediment	VTGCGCILLIAAIVGLIVFLIFGSTDAGEPIETAVALFLLILLGQRLALVPRRRLLVRVRDA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065498

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign