NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065477

Metagenome / Metatranscriptome Family F065477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065477
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 74 residues
Representative Sequence MKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYLMPPIDAIENP
Number of Associated Samples 107
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.89 %
% of genes near scaffold ends (potentially truncated) 12.60 %
% of genes from short scaffolds (< 2000 bps) 51.97 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.638 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.110 % of family members)
Environment Ontology (ENVO) Unclassified
(32.283 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.819 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.04%    β-sheet: 0.00%    Coil/Unstructured: 67.96%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF04986Y2_Tnp 37.01
PF14319Zn_Tnp_IS91 24.41
PF13495Phage_int_SAM_4 16.54
PF00589Phage_integrase 2.36
PF08241Methyltransf_11 0.79
PF00805Pentapeptide 0.79
PF13490zf-HC2 0.79
PF02627CMD 0.79
PF13561adh_short_C2 0.79
PF01855POR_N 0.79
PF04191PEMT 0.79
PF07676PD40 0.79
PF00107ADH_zinc_N 0.79
PF07228SpoIIE 0.79
PF13185GAF_2 0.79
PF00069Pkinase 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.15
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.79
COG0674Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 0.79
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.79
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.79
COG4231TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.64 %
UnclassifiedrootN/A2.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001098|JGI12633J13313_100627All Organisms → cellular organisms → Bacteria → Acidobacteria2107Open in IMG/M
3300001145|JGI12682J13319_1001722All Organisms → cellular organisms → Bacteria → Acidobacteria2360Open in IMG/M
3300001154|JGI12636J13339_1011505All Organisms → cellular organisms → Bacteria → Acidobacteria1353Open in IMG/M
3300001180|JGI12695J13573_1000857All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2403Open in IMG/M
3300001593|JGI12635J15846_10073939All Organisms → cellular organisms → Bacteria2512Open in IMG/M
3300001867|JGI12627J18819_10022721All Organisms → cellular organisms → Bacteria → Acidobacteria2567Open in IMG/M
3300005167|Ga0066672_10044932All Organisms → cellular organisms → Bacteria2505Open in IMG/M
3300005467|Ga0070706_100050220All Organisms → cellular organisms → Bacteria3849Open in IMG/M
3300005591|Ga0070761_10021969All Organisms → cellular organisms → Bacteria → Proteobacteria3554Open in IMG/M
3300005610|Ga0070763_10125893All Organisms → cellular organisms → Bacteria → Acidobacteria1317Open in IMG/M
3300005921|Ga0070766_10415898All Organisms → cellular organisms → Bacteria → Acidobacteria883Open in IMG/M
3300006893|Ga0073928_10086573All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia2667Open in IMG/M
3300006893|Ga0073928_10243008All Organisms → cellular organisms → Bacteria → Acidobacteria1381Open in IMG/M
3300006893|Ga0073928_10572366All Organisms → cellular organisms → Bacteria → Acidobacteria801Open in IMG/M
3300006893|Ga0073928_10572372All Organisms → cellular organisms → Bacteria → Acidobacteria801Open in IMG/M
3300007076|Ga0075435_100063406All Organisms → cellular organisms → Bacteria3001Open in IMG/M
3300007982|Ga0102924_1024102All Organisms → cellular organisms → Bacteria → Proteobacteria4272Open in IMG/M
3300009029|Ga0066793_10024530All Organisms → cellular organisms → Bacteria → Acidobacteria3314Open in IMG/M
3300009088|Ga0099830_10023440All Organisms → cellular organisms → Bacteria4060Open in IMG/M
3300009089|Ga0099828_11533953Not Available587Open in IMG/M
3300009143|Ga0099792_10101339All Organisms → cellular organisms → Bacteria → Acidobacteria1513Open in IMG/M
3300009632|Ga0116102_1011365All Organisms → cellular organisms → Bacteria3234Open in IMG/M
3300009637|Ga0116118_1064747All Organisms → cellular organisms → Bacteria → Acidobacteria1274Open in IMG/M
3300010341|Ga0074045_10043937All Organisms → cellular organisms → Bacteria3272Open in IMG/M
3300011270|Ga0137391_10600206All Organisms → cellular organisms → Bacteria → Acidobacteria923Open in IMG/M
3300011270|Ga0137391_10927187All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300011270|Ga0137391_11484102All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300011271|Ga0137393_10831518All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300011998|Ga0120114_1040397All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300012019|Ga0120139_1080572All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300012189|Ga0137388_10034364All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3984Open in IMG/M
3300012189|Ga0137388_10451871All Organisms → cellular organisms → Bacteria → Acidobacteria1192Open in IMG/M
3300012199|Ga0137383_10596549All Organisms → cellular organisms → Bacteria → Acidobacteria808Open in IMG/M
3300012202|Ga0137363_11291610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium618Open in IMG/M
3300012205|Ga0137362_10235776All Organisms → cellular organisms → Bacteria → Acidobacteria1579Open in IMG/M
3300012205|Ga0137362_10713005All Organisms → cellular organisms → Bacteria → Acidobacteria862Open in IMG/M
3300012210|Ga0137378_10570781All Organisms → cellular organisms → Bacteria → Acidobacteria1040Open in IMG/M
3300012350|Ga0137372_10029366All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia5052Open in IMG/M
3300012354|Ga0137366_10066178All Organisms → cellular organisms → Bacteria → Acidobacteria2756Open in IMG/M
3300012362|Ga0137361_10078942All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2809Open in IMG/M
3300012363|Ga0137390_11075235All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300012923|Ga0137359_10602544All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300012927|Ga0137416_10056613All Organisms → cellular organisms → Bacteria → Acidobacteria2778Open in IMG/M
3300012930|Ga0137407_10031088All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4162Open in IMG/M
3300014489|Ga0182018_10018561All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4647Open in IMG/M
3300014489|Ga0182018_10467323All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300014495|Ga0182015_10027651All Organisms → cellular organisms → Bacteria → Acidobacteria4447Open in IMG/M
3300015054|Ga0137420_1191134All Organisms → cellular organisms → Bacteria → Acidobacteria1093Open in IMG/M
3300015371|Ga0132258_10178577All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5128Open in IMG/M
3300017925|Ga0187856_1022738All Organisms → cellular organisms → Bacteria → Acidobacteria3154Open in IMG/M
3300017938|Ga0187854_10259376All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300018020|Ga0187861_10217227Not Available847Open in IMG/M
3300018022|Ga0187864_10012328All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales5638Open in IMG/M
3300018038|Ga0187855_10003063All Organisms → cellular organisms → Bacteria12406Open in IMG/M
3300018433|Ga0066667_10019865All Organisms → cellular organisms → Bacteria → Acidobacteria3542Open in IMG/M
3300019888|Ga0193751_1014370All Organisms → cellular organisms → Bacteria → Acidobacteria4061Open in IMG/M
3300020006|Ga0193735_1011912All Organisms → cellular organisms → Bacteria → Acidobacteria2736Open in IMG/M
3300020006|Ga0193735_1013026All Organisms → cellular organisms → Bacteria → Acidobacteria2612Open in IMG/M
3300020021|Ga0193726_1028699All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2774Open in IMG/M
3300020579|Ga0210407_10314484All Organisms → cellular organisms → Bacteria → Acidobacteria1223Open in IMG/M
3300020580|Ga0210403_10057442All Organisms → cellular organisms → Bacteria → Acidobacteria3116Open in IMG/M
3300020581|Ga0210399_10036074All Organisms → cellular organisms → Bacteria → Acidobacteria3959Open in IMG/M
3300020581|Ga0210399_10569257All Organisms → cellular organisms → Bacteria → Acidobacteria938Open in IMG/M
3300020582|Ga0210395_10071772All Organisms → cellular organisms → Bacteria2546Open in IMG/M
3300020582|Ga0210395_10072666All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2531Open in IMG/M
3300021168|Ga0210406_10157080All Organisms → cellular organisms → Bacteria → Acidobacteria1906Open in IMG/M
3300021171|Ga0210405_11098259All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300021180|Ga0210396_10180660All Organisms → cellular organisms → Bacteria → Acidobacteria1889Open in IMG/M
3300021420|Ga0210394_11004706All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300022557|Ga0212123_10114227All Organisms → cellular organisms → Bacteria2166Open in IMG/M
3300022557|Ga0212123_10158427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1735Open in IMG/M
3300022557|Ga0212123_10220996All Organisms → cellular organisms → Bacteria → Acidobacteria1384Open in IMG/M
3300022557|Ga0212123_10283574All Organisms → cellular organisms → Bacteria → Acidobacteria1167Open in IMG/M
3300023056|Ga0233357_1000251All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2664Open in IMG/M
3300024225|Ga0224572_1060337All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300024227|Ga0228598_1090171All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300025915|Ga0207693_10121516All Organisms → cellular organisms → Bacteria → Acidobacteria2051Open in IMG/M
3300025922|Ga0207646_10010386All Organisms → cellular organisms → Bacteria9105Open in IMG/M
3300026294|Ga0209839_10018718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2747Open in IMG/M
3300026351|Ga0257170_1001407All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2371Open in IMG/M
3300026376|Ga0257167_1060859All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300026480|Ga0257177_1012918All Organisms → cellular organisms → Bacteria → Acidobacteria1126Open in IMG/M
3300026481|Ga0257155_1037658All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300026489|Ga0257160_1021699All Organisms → cellular organisms → Bacteria → Acidobacteria1018Open in IMG/M
3300026490|Ga0257153_1008042All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2085Open in IMG/M
3300026498|Ga0257156_1001015All Organisms → cellular organisms → Bacteria → Acidobacteria5014Open in IMG/M
3300026551|Ga0209648_10435023All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300026880|Ga0209623_1000596All Organisms → cellular organisms → Bacteria → Acidobacteria1606Open in IMG/M
3300027047|Ga0208730_1023365All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300027064|Ga0208724_1003451All Organisms → cellular organisms → Bacteria → Acidobacteria1413Open in IMG/M
3300027109|Ga0208603_1049547All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300027334|Ga0209529_1029981All Organisms → cellular organisms → Bacteria → Acidobacteria929Open in IMG/M
3300027370|Ga0209010_1001666All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5536Open in IMG/M
3300027370|Ga0209010_1002102Not Available4769Open in IMG/M
3300027376|Ga0209004_1001072All Organisms → cellular organisms → Bacteria3169Open in IMG/M
3300027521|Ga0209524_1028752All Organisms → cellular organisms → Bacteria → Acidobacteria1161Open in IMG/M
3300027521|Ga0209524_1044673All Organisms → cellular organisms → Bacteria → Acidobacteria933Open in IMG/M
3300027535|Ga0209734_1004561All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2442Open in IMG/M
3300027565|Ga0209219_1020723All Organisms → cellular organisms → Bacteria → Acidobacteria1608Open in IMG/M
3300027591|Ga0209733_1004889All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3371Open in IMG/M
3300027629|Ga0209422_1001099All Organisms → cellular organisms → Bacteria → Acidobacteria6460Open in IMG/M
3300027651|Ga0209217_1029662All Organisms → cellular organisms → Bacteria → Acidobacteria1717Open in IMG/M
3300027684|Ga0209626_1001686All Organisms → cellular organisms → Bacteria4822Open in IMG/M
3300027846|Ga0209180_10025811All Organisms → cellular organisms → Bacteria3138Open in IMG/M
3300027879|Ga0209169_10013966All Organisms → cellular organisms → Bacteria → Acidobacteria4419Open in IMG/M
3300027884|Ga0209275_10334308All Organisms → cellular organisms → Bacteria → Acidobacteria846Open in IMG/M
3300027889|Ga0209380_10066315All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2057Open in IMG/M
3300027889|Ga0209380_10189841All Organisms → cellular organisms → Bacteria → Acidobacteria1206Open in IMG/M
3300027911|Ga0209698_10849504All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300030763|Ga0265763_1020772All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300030916|Ga0075386_10088240All Organisms → cellular organisms → Bacteria → Acidobacteria1244Open in IMG/M
3300030940|Ga0265740_1004156All Organisms → cellular organisms → Bacteria → Acidobacteria1119Open in IMG/M
3300030991|Ga0073994_10065138All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300031128|Ga0170823_13952586All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300031446|Ga0170820_12458322All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300031469|Ga0170819_16528721All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300031474|Ga0170818_105859841All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300031525|Ga0302326_11505590All Organisms → cellular organisms → Bacteria → Acidobacteria901Open in IMG/M
3300031708|Ga0310686_112720867All Organisms → cellular organisms → Bacteria → Acidobacteria2323Open in IMG/M
3300031753|Ga0307477_10059867All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2623Open in IMG/M
3300031753|Ga0307477_10636718All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300031962|Ga0307479_10052597All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3919Open in IMG/M
3300031962|Ga0307479_11599102All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300032160|Ga0311301_10187821All Organisms → cellular organisms → Bacteria3587Open in IMG/M
3300032174|Ga0307470_10012597All Organisms → cellular organisms → Bacteria → Acidobacteria3564Open in IMG/M
3300032180|Ga0307471_100037523All Organisms → cellular organisms → Bacteria3834Open in IMG/M
3300032180|Ga0307471_100168455All Organisms → cellular organisms → Bacteria → Acidobacteria2139Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.11%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil17.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.75%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring7.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.51%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.51%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.51%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.15%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.94%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.57%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.57%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.79%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.79%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.79%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.79%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001098Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1EnvironmentalOpen in IMG/M
3300001145Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2EnvironmentalOpen in IMG/M
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001180Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300023056Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026376Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027064Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)EnvironmentalOpen in IMG/M
3300027109Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)EnvironmentalOpen in IMG/M
3300027334Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300030763Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12633J13313_10062713300001098Forest SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIEPIENP*
JGI12682J13319_100172213300001145Forest SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHRSI
JGI12636J13339_101150513300001154Forest SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIEPIENP*
JGI12695J13573_100085733300001180Forest SoilMKPISQNRKARSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQARPSIAYLMPPIDAIENP
JGI12635J15846_1007393933300001593Forest SoilMKPIPHNRKPRSLFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRFIAYLMPPIDAIENP*
JGI12627J18819_1002272143300001867Forest SoilMIPTSQNRKPRSVFWLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLFSHQGHCSIAYLLPPIDPIENP*
Ga0066672_1004493213300005167SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLLIDPESVPTSIIFYFHHRLQGILLFFHQTHRSIAYLMPTIDVIENP*
Ga0070706_10005022033300005467Corn, Switchgrass And Miscanthus RhizosphereMKPISKIRKSRSIFRIDPPSCALPPKKPLVPAPKSLPTAIIFYLHHRLQAILLISRQAHRSIVYLMPPIYPIENP*
Ga0070761_1002196923300005591SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFHPPRTPVLRLP*
Ga0070763_1012589313300005610SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFTHHAHRFFAYLRPPTDAIENP*
Ga0070766_1041589823300005921SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFTHLAHRFFAYLRPPIDAIENP*
Ga0073928_1008657313300006893Iron-Sulfur Acid SpringMKPISQNRKPRSVFRLDPPSCALPPKKVLLPDPESVPTAIIFYFHHRLPAILLFTHPAHRFIAYLMPPIDAIQNP*
Ga0073928_1024300823300006893Iron-Sulfur Acid SpringMKPISQNRKPRSVFRLDPPSCTLPPKKVLVLDPESVPTAIIFHFNHPPPATPLLSHQEHRSIAYFMPPIDPIENA*
Ga0073928_1057236613300006893Iron-Sulfur Acid SpringMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLPATPLISHQEHRSIAYLIPPIDAIQNP*
Ga0073928_1057237213300006893Iron-Sulfur Acid SpringMKPISQDRKPRSVFRLDPPSCALPPKKILVPDSESVPTAIIFYVHHCLSAILLFTHHAHRSIAYLMPPTDAIENP*
Ga0075435_10006340623300007076Populus RhizosphereMKPISQNRKPRSIFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPPILLFTHQAHRSIAYLMPPLDAIENP*
Ga0102924_102410223300007982Iron-Sulfur Acid SpringMKPISQNRKPRSIFRLDPPSCALPPKKALVPDPESLPTAITFYFHQPVQATLLFSHQAHCSIAYLMPPIDPIENP*
Ga0066793_1002453023300009029Prmafrost SoilMKPISQNRKPRSVFRLDSPSCALPPKKVLVPDPESVPTTIIFYFHYRLQAILLFTHRAHRSIAYLMPPIDPIQNP*
Ga0099830_1002344023300009088Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYPMPPIDAIENP*
Ga0099828_1153395313300009089Vadose Zone SoilMKPIFKNRKSRSVFRLDPPSCALPPKKVLAPDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDAIENP*
Ga0099792_1010133933300009143Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDLESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPIIDVIENP*
Ga0116102_101136523300009632PeatlandMKPIFKIRQSRSIFRLDPPLCALPPKKVLVPAPESLPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIDAIENP*
Ga0116118_106474713300009637PeatlandMKPIFKIRQSRSIFRPDPPLCALPPKKVLVPAPESLPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIDAIENP*
Ga0074045_1004393733300010341Bog Forest SoilMKPISQSRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFHFHHRLPAILLFSHQAHRSIAYLMPPIDAIENP*
Ga0137391_1060020613300011270Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALLPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHPAHRFIAYLMPPIDAIQNP*
Ga0137391_1092718713300011270Vadose Zone SoilMKPISKNRKSRSVFRLDPHSCALPPKKVLVPDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDPIENP*
Ga0137391_1148410223300011270Vadose Zone SoilMKPISKIRKSRSIFRIDPPSCALPPKKVPVPDPESVRTAIVFYFNHPLQPTLLFSHQAHRSIAYLTPPIDPI
Ga0137393_1083151823300011271Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDLESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPIIHVIENP*
Ga0120114_104039723300011998PermafrostMKPISQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAIIFYFHHRLQAILLFSHQAHHSNAYFMPPIDAIENP*
Ga0120139_108057223300012019PermafrostMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRFIAYLMPPIDAIENP*
Ga0137388_1003436463300012189Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAILFYFHHRLPAILLFTHQAHRSIAYPMPPIDAIENP*
Ga0137388_1045187123300012189Vadose Zone SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLQATLLFSHQAHRSIAYLMPSIDSIENP*
Ga0137383_1059654913300012199Vadose Zone SoilMKPISQNRKPRSLFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAY
Ga0137363_1129161013300012202Vadose Zone SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLQATLLFFHQAHRSIAYLMPPIDSIENP*
Ga0137362_1023577623300012205Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPIIDVIENP*
Ga0137362_1071300513300012205Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYLMPPIDAIENP*
Ga0137378_1057078123300012210Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKILALDPQSVPTAIIFYFHHRLRAILLFSHQAHRSIAYLMPPIDAIENP*
Ga0137372_1002936673300012350Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPTIDVIEDP*
Ga0137366_1006617833300012354Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLFSHQALLHRLPHAAHRPY*
Ga0137361_1007894213300012362Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPHPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYLMPPIDAIENP*
Ga0137390_1107523513300012363Vadose Zone SoilMKPISQNREPRSVFRLDPPSCALPPKKILALDPQSVPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIDAIENP*
Ga0137359_1060254413300012923Vadose Zone SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLQATLLFFHQAHRSIAYLMPPIDSIENP
Ga0137416_1005661323300012927Vadose Zone SoilMKPTSQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIYVIENP*
Ga0137407_1003108833300012930Vadose Zone SoilMKPTSQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLQAILLISHQAHRSIAYLMPPIYVIENP*
Ga0182018_1001856123300014489PalsaMKPISQDRKPRSVFRLDPPSCALPSKKILVPHPESVPTAIIFYFHRRLSAILLFTHHAHRSIAYLMPPIDAIENP*
Ga0182018_1046732313300014489PalsaMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHPSI
Ga0182015_1002765153300014495PalsaMKPISQDRKPRSVFRLDPPSCALPPKKILVPDPESVPTAIIFYFHRRLSAILLFTHHAHRSIAYLMPPIDAIENP*
Ga0137420_119113423300015054Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYPM
Ga0132258_1017857753300015371Arabidopsis RhizosphereMKPIFKNRKSRSVFRLDPPSCALPQKNVLIPDLESVPTAIIFYFHRPLPATLLFSHQAHRSIAHLMPPIDPIENA*
Ga0187856_102273833300017925PeatlandMKPIFKIRQSRSIFRPDPPLCALPPKKVLVPAPESLPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIDAIENP
Ga0187854_1025937613300017938PeatlandMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHPSIAYPM
Ga0187861_1021722723300018020PeatlandSAFVPPCRMKPIFKIRQSRSIFRLDPRSCVLPPKKVLVPIPESLPTAIIFYFQHRLQAILLFSHQTHRSIAYLMPPIDAIENP
Ga0187864_1001232863300018022PeatlandMKPIFKIRQSRSIFRLDPPLCALPPKKVLVPAPESLPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIDAIENP
Ga0187855_1000306313300018038PeatlandMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHPSIAYLMPPIDAIENP
Ga0066667_1001986523300018433Grasslands SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLLIDPESVPTSIIFYFHHRLQGILLFFHQTHRSIAYLMPTIDVIENP
Ga0193751_101437023300019888SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTDPAHRFIAYLMPPIDAIQNP
Ga0193735_101191213300020006SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLIPDPESVPTAIIFYFHHRLPAILLFTHPAHRFIAYLMPPIDAIQNP
Ga0193735_101302633300020006SoilMKPISQNRKPRSLFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAHLMPPIDAIENP
Ga0193726_102869913300020021SoilMKPISQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQVALLFPHQAHCSIAYLMPPIDPIENP
Ga0210407_1031448413300020579SoilMKPISQNRKPRSLFRLDPTSCALPPKRVLVFDPESVPTPIIFYFHHRLQGILLFFHQAHRSIAYLRPTIDVIENP
Ga0210403_1005744223300020580SoilMKPISQNRKPRSVFRLDPPSCALPPKKVFVPDPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIDPIENP
Ga0210399_1003607413300020581SoilMKPISQDRKPRSVFRLDPPSSALPSKKLLVPDPESVPTAIIFYVHHRLSAILLFTHLAHRFFAYLRPPIDAIENP
Ga0210399_1056925723300020581SoilMKSISQNRKPRSLFRFDPPSCALPPKKVFVPDPESVPTAIIFYFNHPLPATLPFSHQAHPSIAY
Ga0210395_1007177223300020582SoilMKPISQNRKPRSLFRLDPPSCALPPKKVLVLDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDPIENP
Ga0210395_1007266633300020582SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFTHLAHRFFAYLRPPIDAIENP
Ga0210406_1015708023300021168SoilMKSISQNRKPRSVFRLDPLSCALPPKKVFVPDPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIDPIENP
Ga0210405_1109825913300021171SoilMKSISQNRKPRSLFRFDPPSCALPPKKVFVPDPESVPTAIIFYFNHPLPATLLFSHQAHPTIAYLMPPIDPIENP
Ga0210396_1018066043300021180SoilMKSISQNRKPRSLFRFDPPSCALPPKKVFVPDPESVPTAIIFYFNHPLPATLPFSHQAHPSIAYLMPPIDPIENP
Ga0210394_1100470613300021420SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFTHLAHRFFAYLRPPI
Ga0212123_1011422723300022557Iron-Sulfur Acid SpringMKPISQDRKPRSVFRLDPPSCALPPKKILVPDSESVPTAIIFYVHHCLSAILLFTHHAHRSIAYLMPPTDAIENP
Ga0212123_1015842723300022557Iron-Sulfur Acid SpringMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLPATPLISHQEHRSIAYLIPPIDAIQNP
Ga0212123_1022099623300022557Iron-Sulfur Acid SpringMKPISQNRKPRSVFRLDPPSCTLPPKKVLVLDPESVPTAIIFHFNHPPPATPLLSHQEHRSIAYFMPPIDPIENA
Ga0212123_1028357413300022557Iron-Sulfur Acid SpringMKSISQNRKPRSVFRLDPTSCALPPKKVFVPDPESVPIAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIEPIENP
Ga0233357_100025133300023056SoilMKPISPNRKPRSAFRLDPPSCALPPKKVLVLDPESVPTAIIFYFNHPLPATPLLSHQEHRSIAYLMPPIDPIENP
Ga0224572_106033713300024225RhizosphereMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPTSIIFYFHHRLQVILLFFHQAHRSIAYLMPTIDVIENP
Ga0228598_109017113300024227RhizosphereMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPTIDVIENP
Ga0207693_1012151623300025915Corn, Switchgrass And Miscanthus RhizosphereMNPISQNRKPRSVFRLDPLSCALPPKKVLVPDPESLPTPIIFYFHHRLPAILLFTHQAHRSIAYLMPPIDAIENP
Ga0207646_1001038663300025922Corn, Switchgrass And Miscanthus RhizosphereMKPISKNRKSRSLFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDPIENP
Ga0209839_1001871833300026294SoilMKPISQNRKPRSVFRLDSPSCALPPKKVLVPDPESVPTTIIFYFHYRLQAILLFTHRAHRSIAYLMPPIDPIQNP
Ga0257170_100140713300026351SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLQATLLFSHQAHRPIAYLMPPIDSIENP
Ga0257167_106085913300026376SoilMKPTSQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLQAILLFSHQAHRSIAYLMPPIYVIENP
Ga0257177_101291813300026480SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLQATLLFSHQAHRPIAYLM
Ga0257155_103765823300026481SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFVPDPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIDPIENP
Ga0257160_102169923300026489SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIEPIENP
Ga0257153_100804213300026490SoilMKSISQNHKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHPSIAYLMPPIEPIENP
Ga0257156_100101523300026498SoilMKPISQNRKPRSVSRLDPPSCALPPKKVLVPDPESVPTAIIFYFRHHLPAIRLFPHQAPRSIAYLMPPHRPY
Ga0209648_1043502313300026551Grasslands SoilMKSISQNRKPRSVFRLDPPSYPLPPKKVFVPDPESVPTSIIFYFHHRLPAILLFPHQAHRSIAYPMPPIDAIENP
Ga0209623_100059623300026880Forest SoilMKPISQNRKPRSVFRLDPPSCTLPPKKVLVLDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIEPIENP
Ga0208730_102336523300027047Forest SoilHPDPHCRSDPAPFSAFIPPGRMKPISKIRKSQSIFRIDPPSCALPPKKVPLPDPQSVRTAIIFYFNHPLQATLLFAHQAHWSIAYLMPPIDPIENP
Ga0208724_100345123300027064Forest SoilMKPISKIRKSQSLFRIDPPSCALPPKKVPLPDPQSVRTAIIFYFHHPLQATLLFAHQAHWSIAYLMPPIDPIENP
Ga0208603_104954723300027109Forest SoilMKPISKIRKSQSIFRIDPPSCALPPKKVPLPDPQSVRTAIIFYFNHPLQATLLFAHQAHWSIAYLMPPIDPIENP
Ga0209529_102998113300027334Forest SoilMKSISQNRKPRSVFRLDPPSYALPPKKVFIPHPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIEPIENP
Ga0209010_100166623300027370Forest SoilMKPFSQNRKPRSLFRLDSPSCALPPKKILDPDPESLPTANIFYFHHCLPAILLFTHPAHRSIASLMPPFDAIQNP
Ga0209010_100210233300027370Forest SoilMKPIPHNRKPRSLFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRFIAYLMPPIDAIENP
Ga0209004_100107223300027376Forest SoilMIPTSQNRKPRSVFWLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLFSHQGHCSIAYLLPPIDPIENP
Ga0209524_102875213300027521Forest SoilMKPISQNRKPRSVFRLDSPSCALPPKKVLLPDPESVPTTIIFYFHYRLQAILLFTHRAHRSIAYLMPPI
Ga0209524_104467323300027521Forest SoilMKPISQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLFSHQGHCSIAYLMPPIDPIENP
Ga0209734_100456133300027535Forest SoilMKSISQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLFSHQGHCSIAYLMPPIEPIENP
Ga0209219_102072313300027565Forest SoilMKPISKNRKSRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDPIENP
Ga0209733_100488943300027591Forest SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPNPKSVPTAIIFYFHHRLPAMLLFSHQAHRSIAYLMPPIDAIENP
Ga0209422_100109963300027629Forest SoilMKPISQNRKARSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHPSIAYLMPPIDAIENP
Ga0209217_102966213300027651Forest SoilMKPILKIRQSRSIFRLDPPSCALPPKKVLVPAPESLATAIIFYFHHRLQAILLFSHQSHRSIAYLMLPIDAIENP
Ga0209626_100168663300027684Forest SoilMKPISQNRKPRSVFRLDSPSCALPPKKVLLPDPESVPTTIIFYFHYRLQAILLFTHRAHRSIAYLMPPIDPIQNP
Ga0209180_1002581133300027846Vadose Zone SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYPMPPIDAIENP
Ga0209169_1001396653300027879SoilMKPISQDRKPRSVFRLDPPSSALPSKKILVPDPESVPTAIIFYVHHRLSAILLFTHHAHRFFAYLRPPTDAIENP
Ga0209275_1033430813300027884SoilMKPISQDRKPRSVFRLDPPSCALPQKKVLVLDPESVPTAIIFYFNHPLPATPHPSHQEHRSIAYLMPPIHPIENP
Ga0209380_1006631533300027889SoilMKPISQNRKPRSVFRLDSSSCALHLKKVLVPDPESVPTTIIFYFHYRLQAILLFTHRAHRSIAYLMPPIDPIQNP
Ga0209380_1018984113300027889SoilMKPISQNRKPRSAFRLDPPSCALPPKKVLVPNPKSVPTAIIFYFHHRLPAMLLFSHQAHRSIAYLMPPIDAIENP
Ga0209698_1084950413300027911WatershedsMKPISQNPKPRSVFRLDPPSCALPPKKVLVLDPESVPTAIIFYFNHPLPATPLLSHQEHRSIAYLMPPIDPIENP
Ga0265763_102077213300030763SoilMKPISQNRKPRSVFRLDSSSCALHLKKVLVPDPESVPTTIIFYFHYRLQAILLFTHQAHRSIAY
Ga0075386_1008824023300030916SoilMKPISQNPKPRSLFRLDPTSCALPPKRVLVFDPESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPTIDVIENP
Ga0265740_100415623300030940SoilMKPISQDRKPRSVFRLDPPSCALPPKKVLVLDPESVPTAIIFYFNHPLPATPLLSHQEHRSIAYLMPPIDPIENA
Ga0073994_1006513813300030991SoilMKSISQNRKPRSVFRLDPPSCALPPKKVFVPDPESVPIAIIFYFNHPLPATPLFSHQAHPSIAYLMPPIDPIENP
Ga0170823_1395258623300031128Forest SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVPDPESVPTANIFYFHHRLPALLLCTHQAHRSIAYLMPPIDAIENP
Ga0170820_1245832213300031446Forest SoilMKPISQNPKPRSLFRLDPTSCALPPKRVLVFDPESVPTSIIFYFHHRLQAILLFFHHAHRSIAYLRPTIDLIENP
Ga0170819_1652872123300031469Forest SoilMKPIPQNRKPRSVFRLDPPSCALPPKRILVFDPQSVPTSIIFYFHHRLQGILLFFHQAHRSIAYLMPTIDVIENP
Ga0170818_10585984123300031474Forest SoilMKPISQNPKPRSLFRLDPTSCALPPKRVPVFDPESVPTSIIFYFHHRLQGILLFFHQAHRSIAYLRPTIDVIENP
Ga0302326_1150559013300031525PalsaMKPISQDRKPRSVFRLDPPSCALPSKKILVPHPESVPTAIIFYVHHRLSAILLFTHHAHRFIAYLRPPIDAIENP
Ga0310686_11272086723300031708SoilMKPISKIRKSRSIFRIDPPSCALPPKKVPVPDPESVRTAIVFYFNHPLQATLLFSHQAHRSIAYLTPPIDPIENA
Ga0307477_1005986713300031753Hardwood Forest SoilMKPISQNRKSRSVSRLDPPSCALSPKKVLVPDPESVPTAILFYFHHRLPAILLFTHQAHRSIADLMPSIDAIENP
Ga0307477_1063671823300031753Hardwood Forest SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPTAIIFYFNHPLPATPLLSHQEHRSIAYLMPPIDPIENA
Ga0307479_1005259753300031962Hardwood Forest SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLDPDPESVPTAIIFYFNHPLPATLLFSHQAHRSIAYLMPPIDPIENP
Ga0307479_1159910213300031962Hardwood Forest SoilMKPISKIRKSRSIFRIDPPSCALPPKKPLVPAPKSLPTAIIFYLHHRLQAILLISRQAHRSIVYLI
Ga0311301_1018782123300032160Peatlands SoilMKPTSQNRKPRSVFRLDPPSCALPPNKVPLPDPESVPTAITFYFHQPVQATLLSSHQGHCSIAYLLPPIDPIENP
Ga0307470_1001259713300032174Hardwood Forest SoilMKPISQNRKPRSVFRLDPLSCALPPDKVPLPDPESVPTAITFYFNQPVQPTLLFSHHGHCSIAYLMPPIDPIENP
Ga0307471_10003752313300032180Hardwood Forest SoilMKPISQNRKPRSIFRLDPPSCALPSKKILVPDPESVPTAIIFYFHHRLPAILLFTHQAHRSIAYLMPPVDAIENP
Ga0307471_10016845533300032180Hardwood Forest SoilMKPISQNRKPRSVFRLDPPSCALPPKKVLVLDPESVPNAIIFHFNHPLPATPLLSHQEHRSIAYLMPPIDPIENA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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