Metagenome / Metatranscriptome Family F065374

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065374
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	83 residues
Representative Sequence	MPETRNAGRRGRLPVKPPGERFAIQYLSSYLRAPLPAPAYPVDVTSGITDWGMLGNGPDPTCTTHPDGVGDCTFAGRQHYKMA
Number of Associated Samples	114
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.21 %
% of genes near scaffold ends (potentially truncated)	96.06 %
% of genes from short scaffolds (< 2000 bps)	94.49 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.189 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.496 % of family members)
Environment Ontology (ENVO)	Unclassified (27.559 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.51% β-sheet: 3.60% Coil/Unstructured: 82.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00085	Thioredoxin	22.83
PF00294	PfkB	1.57
PF03795	YCII	1.57
PF00652	Ricin_B_lectin	1.57
PF11774	Lsr2	1.57
PF00941	FAD_binding_5	0.79
PF00920	ILVD_EDD	0.79
PF14117	DUF4287	0.79
PF04250	DUF429	0.79
PF01183	Glyco_hydro_25	0.79
PF00248	Aldo_ket_red	0.79
PF00877	NLPC_P60	0.79
PF01471	PG_binding_1	0.79
PF02583	Trns_repr_metal	0.79
PF01738	DLH	0.79
PF01636	APH	0.79
PF00440	TetR_N	0.79
PF13556	HTH_30	0.79
PF08305	NPCBM	0.79
PF03816	LytR_cpsA_psr	0.79
PF11255	DUF3054	0.79
PF04149	DUF397	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.57
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.57
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.79
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.79
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.19 %
Unclassified	root	N/A	11.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.19 %
Unclassified	root	N/A	11.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.19 %
Unclassified	root	N/A	11.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.89 %
Unclassified	root	N/A	11.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.31 %
Unclassified	root	N/A	11.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.57 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.59 %
Unclassified	root	N/A	11.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.57 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.57 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.57 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	1.57 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.57 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.81 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1.57 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Microtetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.81 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	1.57 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
unclassified Microtetraspora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → unclassified Microtetraspora	0.79 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.81 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	1.57 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Microtetraspora sp. AC03309	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → unclassified Microtetraspora → Microtetraspora sp. AC03309	0.79 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100316940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1442	Open in IMG/M
3300002245\|JGIcombinedJ26739_101825296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300005172\|Ga0066683_10567261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300005435\|Ga0070714_101047072	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005435\|Ga0070714_102071734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300005436\|Ga0070713_101417234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300005536\|Ga0070697_100373391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1234	Open in IMG/M
3300005602\|Ga0070762_10630854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300005712\|Ga0070764_10745059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	606	Open in IMG/M
3300005921\|Ga0070766_10980703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	581	Open in IMG/M
3300005952\|Ga0080026_10226936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300006028\|Ga0070717_10378605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1269	Open in IMG/M
3300006059\|Ga0075017_100814594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300009088\|Ga0099830_10225835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1474	Open in IMG/M
3300010117\|Ga0127449_1118284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300010359\|Ga0126376_11235858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300010361\|Ga0126378_10306275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1692	Open in IMG/M
3300010373\|Ga0134128_11410023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300010396\|Ga0134126_12061815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300010866\|Ga0126344_1157791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300010867\|Ga0126347_1321836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300010877\|Ga0126356_10600353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300010905\|Ga0138112_1052373	Not Available	763	Open in IMG/M
3300012208\|Ga0137376_10977487	Not Available	725	Open in IMG/M
3300012210\|Ga0137378_10170048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2024	Open in IMG/M
3300012377\|Ga0134029_1140516	Not Available	712	Open in IMG/M
3300012392\|Ga0134043_1049251	Not Available	753	Open in IMG/M
3300012971\|Ga0126369_12054731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300014165\|Ga0181523_10257079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	996	Open in IMG/M
3300014495\|Ga0182015_10164507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → unclassified Microtetraspora → Microtetraspora sp. AC03309	1501	Open in IMG/M
3300014501\|Ga0182024_11823973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	679	Open in IMG/M
3300014658\|Ga0181519_10836417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300017937\|Ga0187809_10161324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300017942\|Ga0187808_10591100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300017943\|Ga0187819_10614334	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300017955\|Ga0187817_11072943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300017973\|Ga0187780_10304263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300018007\|Ga0187805_10577812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300018035\|Ga0187875_10126539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1439	Open in IMG/M
3300018042\|Ga0187871_10093624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1738	Open in IMG/M
3300018468\|Ga0066662_11365912	Not Available	731	Open in IMG/M
3300021088\|Ga0210404_10688579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300021401\|Ga0210393_10328457	Not Available	1244	Open in IMG/M
3300021401\|Ga0210393_10590080	All Organisms → cellular organisms → Bacteria → Terrabacteria group	907	Open in IMG/M
3300021403\|Ga0210397_10674257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300021407\|Ga0210383_11439418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300021474\|Ga0210390_11189464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300022533\|Ga0242662_10097405	Not Available	834	Open in IMG/M
3300022724\|Ga0242665_10090513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300025898\|Ga0207692_10213478	Not Available	1141	Open in IMG/M
3300025929\|Ga0207664_10214575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1666	Open in IMG/M
3300026327\|Ga0209266_1187726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300026538\|Ga0209056_10737669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300027505\|Ga0209218_1141861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300027824\|Ga0209040_10117600	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300027884\|Ga0209275_10398452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300027895\|Ga0209624_10156534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1507	Open in IMG/M
3300027908\|Ga0209006_10038528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4319	Open in IMG/M
3300027908\|Ga0209006_10259020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1495	Open in IMG/M
3300027908\|Ga0209006_10894044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300028573\|Ga0265334_10273489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300028747\|Ga0302219_10340128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300028877\|Ga0302235_10275004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300028906\|Ga0308309_11838107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300029701\|Ga0222748_1038210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300029910\|Ga0311369_10369669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1255	Open in IMG/M
3300029999\|Ga0311339_11132182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300030056\|Ga0302181_10129126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300030399\|Ga0311353_10231420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1721	Open in IMG/M
3300030399\|Ga0311353_11135084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300030524\|Ga0311357_11468077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300030524\|Ga0311357_11802267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300030730\|Ga0307482_1189350	Not Available	620	Open in IMG/M
3300031234\|Ga0302325_11721534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300031236\|Ga0302324_101499406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876	Open in IMG/M
3300031236\|Ga0302324_102540349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300031525\|Ga0302326_12894780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300031544\|Ga0318534_10845547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300031549\|Ga0318571_10403359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300031616\|Ga0307508_10468011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300031640\|Ga0318555_10809138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300031708\|Ga0310686_101021979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	820	Open in IMG/M
3300031708\|Ga0310686_103836894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1112	Open in IMG/M
3300031713\|Ga0318496_10214271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300031715\|Ga0307476_10424287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300031718\|Ga0307474_11523778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300031744\|Ga0306918_11310126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300031747\|Ga0318502_10419883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300031771\|Ga0318546_10525789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300031781\|Ga0318547_10387439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300031781\|Ga0318547_11019132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300031795\|Ga0318557_10197500	Not Available	918	Open in IMG/M
3300031796\|Ga0318576_10120582	Not Available	1210	Open in IMG/M
3300031799\|Ga0318565_10375625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300031805\|Ga0318497_10482525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300031821\|Ga0318567_10685292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031832\|Ga0318499_10097603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1135	Open in IMG/M
3300031833\|Ga0310917_11074765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300031860\|Ga0318495_10497158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300031890\|Ga0306925_11352923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031897\|Ga0318520_10864251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300031941\|Ga0310912_10938719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300031945\|Ga0310913_10749848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300031954\|Ga0306926_12244330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300031959\|Ga0318530_10022583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2177	Open in IMG/M
3300031962\|Ga0307479_11145782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300031962\|Ga0307479_11979521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300031981\|Ga0318531_10315878	Not Available	706	Open in IMG/M
3300032009\|Ga0318563_10312179	Not Available	851	Open in IMG/M
3300032010\|Ga0318569_10033876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2143	Open in IMG/M
3300032010\|Ga0318569_10338920	All Organisms → cellular organisms → Bacteria → Terrabacteria group	700	Open in IMG/M
3300032039\|Ga0318559_10415324	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300032055\|Ga0318575_10161659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300032060\|Ga0318505_10430070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300032067\|Ga0318524_10104681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1404	Open in IMG/M
3300032068\|Ga0318553_10669742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300032091\|Ga0318577_10537117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300032261\|Ga0306920_100554055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1704	Open in IMG/M
3300032515\|Ga0348332_10870109	Not Available	829	Open in IMG/M
3300032665\|Ga0316221_1267886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300032805\|Ga0335078_10017537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10640	Open in IMG/M
3300032829\|Ga0335070_10845320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300032895\|Ga0335074_11553262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300033134\|Ga0335073_10017344	All Organisms → cellular organisms → Bacteria	10079	Open in IMG/M
3300033134\|Ga0335073_11995589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300033807\|Ga0314866_024148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.43%
Host-Associated	Host-Associated	1.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.98%
Aquatic	Environmental → Aquatic	9.45%
Plants	Host-Associated → Plants	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.95%
Peat	Environmental → Terrestrial → Peat	10.24%
Freshwater	Environmental → Aquatic → Freshwater	8.66%
Sediment	Environmental → Aquatic → Sediment	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.12%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.36%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.79%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1003169401	3300002245	Forest Soil	MTQTRKAGLRGRLPKKPPAQRFNIQYLSAYLTAPLPAPVYPIDVTAGITDWEMLGNGPDPTCTTHPKGVGDCTFAGRQHYRMAKAAVADETETWESSNALVAEYLAY
JGIcombinedJ26739_1018252961	3300002245	Forest Soil	MTETQTRKAGLRGRLPKKPPAERFNIQYLSAYLTSPLPAPAYPVDVTAGITDWEMLGNGPDPTCTTHPKGV
Ga0066683_105672612	3300005172	Soil	MSTTRMAGRRGRLAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWDMLGNGPDPACTSHPNGVGDCTFAGRQHYR
Ga0070714_1010470721	3300005435	Agricultural Soil	MSSSRDAGLRGRLPKKPPADRFKIRYLSAYLASPLPAPVYPVDVTGGLTDWEMLGNGPDPTCTTHPDGVGDCTFAGRQHYRMAKAAAEKE
Ga0070714_1020717342	3300005435	Agricultural Soil	MSTTRIAGQRGRLPVKPPAERFAIQYLSSYLTAPLPAPAYPVDVTEGIADWGMLGNGPDPACTSHPNGVGDCTFAGRQHYRMAKAAAG
Ga0070713_1014172342	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPPPVYPIDVSGGITDWGMLGNGPDKTCTTHPEGVGDCTFAGRQHYKMAK
Ga0070697_1003733911	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPTKRSAGRRGRLPGKPPAERFAIQYLSGYLTTPLPAPVYPVDVTAGIADWGMLGNGPDPTCT
Ga0070762_106308542	3300005602	Soil	MSTTRIAGQRGRLAVKPPAERFAIQYLASYLTAPLPAPAYPIDVTEGIADWGMLGNGPDPACTSHPNGVGDCTFAGRQHYRMAKAAAGHEAEQ
Ga0070764_107450591	3300005712	Soil	MSPTRIAGLRGRLPKRMPVERFNIQYLPAYLTSPLPAPVYPVDVTAAIADFGMLGNGPDPTCTKHPKGVGDCTFAGRQHYRMAKAAAAGETAKWESSDELVAEYLAYDHG
Ga0070766_109807031	3300005921	Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCTFAGREHYRRAKAAAGHETEKWEDSNQLVAEYLR
Ga0080026_102269361	3300005952	Permafrost Soil	MPETRNAGRRGRLPVKPPGERFAIQYLSSYLRAPLPAPAYPVDVTSGITDWGMLGNGPDPTCTTHPDGVGDCTFAGRQHYKMA
Ga0070717_103786054	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPTKRSAGRRGRLPGKPPAERFAIQYLSGYLTTPLPAPVYPVDVTAGIADWGMLGNGPDPTCTAYPNGVGDCTFAGRQHYRMAKAAAAGLTEKWENSND
Ga0075017_1008145941	3300006059	Watersheds	MTGTRAAGRRGRLPVRPAAERLSVDYLSSYLTTSLPAPVYPVDVSAGITDWGMLGNGPDPATQANPA
Ga0099830_102258353	3300009088	Vadose Zone Soil	MTMPPPRVAGLRGRLPVKPPGERFAIQYLSSYLSTPLPPPVYPVDVTGGIADWGMLGN
Ga0127449_11182842	3300010117	Grasslands Soil	LAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWGMLGNGPDPACTSHPNGVGDCTFAGRQHYRMAKAAGHETEQWESSNALVAEYL
Ga0126376_112358583	3300010359	Tropical Forest Soil	MAMPPTRNSGLRGRLPKKPPAERFNIQYLSAYLTSPLPAPVYPVDVSAGITDWGMLGNGPDPSCTTHPRGVGDCTFAGRQHYRMAKAAAENET
Ga0126378_103062753	3300010361	Tropical Forest Soil	LPVKPPAERFPIQYLSSYLETPLPAPVYPVDVSAGITDWGMLGNGPDPTCTTHPKGVGDCTFAGRQH*
Ga0134128_114100232	3300010373	Terrestrial Soil	MPETREAGLRGRLPKKPPAERFNLQYLSAYLTSPLPAPAYPVDVSAGITDWGMLGNGPDPSCTTHPKGVGDCTFAGRQHYRFAKAAAAA*
Ga0134126_120618152	3300010396	Terrestrial Soil	MPSSRNAGHRGRLPKKAPAERFNIQYLSAYLASPLPAPVYPVDVTAGITDWGMLGNGPDPTCTTHPNGVGDCTFAGRQHYRMAKAAVANE
Ga0126344_11577911	3300010866	Boreal Forest Soil	LAVKPPAERFAIQYLSSYLTAPLPAPAYPVDVTEGIADWGMLGNGPDPACTSHPNGVGD*
Ga0126347_13218361	3300010867	Boreal Forest Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGV
Ga0126356_106003532	3300010877	Boreal Forest Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVTGGVAPDAWGMLGYGPDPTCTTHPDGVGDCTFAGREHY
Ga0138112_10523732	3300010905	Grasslands Soil	LAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWDMLGNGPDPACTSHPNGVGDCTFAGRQ
Ga0137376_109774872	3300012208	Vadose Zone Soil	MSTTRMAGRRGRLAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGHHRLGHARQRP
Ga0137378_101700481	3300012210	Vadose Zone Soil	VKPPAERFAIQYLSSYLTAPLPAPTYPIDVTEGITDWGMLGNGPDPACTSHPSGVGDCTF
Ga0134029_11405162	3300012377	Grasslands Soil	MPDVHDTHGRPRGRLAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWGMLGNGP
Ga0134043_10492512	3300012392	Grasslands Soil	LAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWDMLGNGPDPACTSHPNGVGDCTFA
Ga0126369_120547311	3300012971	Tropical Forest Soil	VKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTLPKYPDGVSDCTFAGRQHNRMAKAAAGGEQENWETTEALVA
Ga0181523_102570791	3300014165	Bog	MPAMRTAGLRGRRPVKPPAERFRIQYLSSYLRTPLPAPVYPVDVTAGITAWGMLGNGPDPTCTTHPN
Ga0182015_101645071	3300014495	Palsa	MTTTRTAGKRGRLPAKPPGERFAIDYVTAYAAPLPAPVYPVDVTGGITAWGMAGNGPDPACTTCPEGVGDCTFAGRLHCQMAKAAAGHE
Ga0182024_118239731	3300014501	Permafrost	MPSTRTAGLRGRLPKKAPAERFNIQYLSAYLTSPLPAPAYPVDVTAGIADWDMLGNGPDPTCTTHPKGVGDCTFAGRQHNR
Ga0181519_108364172	3300014658	Bog	VPTRNAGLRGRLPKKPPAELFNIQYLASYLTSPLPAPAYPIDVTSGITDWQMLGNGPDPT
Ga0187809_101613241	3300017937	Freshwater Sediment	MTQSRQAGLRGRLPVKPPGERFKIQYLSSYLKQPLPAPSYPIDVSGGIVDWQMLGNGPDPTLHVHGGQPVGDCTFAGRQHLKMAKAAGGEEVETWETTDQLVTEYLDYDHGRDQGA
Ga0187808_105911001	3300017942	Freshwater Sediment	MPTTRNAGRRGRLPKKAPAERFNIQYLSAYLTSPLPAPVYPVDVTAGITDWEMLGNGPDP
Ga0187819_106143341	3300017943	Freshwater Sediment	MQVQKGYDMPEMRIAGHRGRLPVKPPAERFAIQYVSSYLRTPLPAPAYPVNVSGSITDWGMLGNGPDS
Ga0187817_110729431	3300017955	Freshwater Sediment	MSQGPPAGLRGRQPVKPPGQRLNIDFLHNYLRAPLPAPRYPIDVSGGINEWQMLGNGPDLTLTVNGGRPVGDCTFAARQHLRMAKAAAAGITEAWETTDQLVTE
Ga0187780_103042633	3300017973	Tropical Peatland	MKGDLAMGNGRQAGLRGRLPVKPPGERFNIQYVTSYLKEPLPPPSYPIDVSGGIVDWQMLGNGPDPTLHVHGGQPVGDCTFAGRQHLRMAKAAAGEEVEKWET
Ga0187805_105778122	3300018007	Freshwater Sediment	MPGKRGRLPKKPPAERFAISYLSAYLPAPLPPPSYPVNVSGGITDWGMLGNGPDPTCTTHPNGVGDCTFAGRQHYRMAKAAAGEETETWEDSNQLVAEYLAYD
Ga0187875_101265391	3300018035	Peatland	MPEVRTAGLRGRRPVKPPAERFPLQYLSSYLRTPLPAPSYPVDVTAGISEWGMLGNGPDPTCTTYPDGVGDCTFAGRQHYRMAKAGAGGESEQWETSDQLVAE
Ga0187871_100936245	3300018042	Peatland	VSVRTAGKRGKLPVKPAGERFAIKYVHEYLAEPLPAPAYPVDVSAGITGWGMLGNGPDPTCTTHPDGVG
Ga0066662_113659121	3300018468	Grasslands Soil	MPTTRSAGRRGRLPVKPPAERFAIQYLSSYLPAPLPPPAYPVDVSAGITGWGMLGNGPDPTCTTHPRGVGDCTFA
Ga0210404_106885792	3300021088	Soil	MSTTRMAGRRGRLAVKPPAERFAIQYLSSYLAAPLPAPAYPIDVTEGIADWGMLGNGPDPACTSHPNGVGDCTFAGRQHYRMAKAAAGHEAEQWESSNALVAEY
Ga0210393_103284573	3300021401	Soil	MSTTRIAGQRGRLAVKPPAERFAIQYLASYLTAPLPAPAYPIDVTEGIADWGMLGNGP
Ga0210393_105900801	3300021401	Soil	MTETQTRKAGLRGRLPKKPVGERFNIQYLSAYLTSPLPAPVYPVDVTAGIADWQMLGNGPDPTCTKDPNG
Ga0210397_106742572	3300021403	Soil	MTDTRMAGLRGRLPAKHPIPGPYLSSYLLAPLPAPVYPIDVSAGITNWGMFGNGPDVTATLHPAGVGDCTFASLQHYMMAKSAGGADSGPLETSNELVR
Ga0210383_114394181	3300021407	Soil	MTETQTRQAGLRGRLPKKPPAERFNIQYLSAYLTSPLPAPVYPVDVTAGITDWQMLGNGPDPTCTKDPNGVGDCTFAGRQHYRMAKAAAI
Ga0210390_111894641	3300021474	Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCTFAGR
Ga0242662_100974052	3300022533	Soil	MPVTRVAGRRGRLPVKPPAERFAIQYLSSYLSTPLPPPVYPVDVSAGITDWGMLGNGPDPTLPQYPGGVGDCTFAG
Ga0242665_100905131	3300022724	Soil	MSTTRIAGQRGRLAVKPPAERFAIQYLASYLTAPLPAPAYPLDATEGIADWGMLGNGPDPACTSHPNGVGDCTFAGRQHYRMAKAAAGHEAE
Ga0207692_102134783	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSTTRIAGQRGRLAVKPPAERFAIQYLSGYLTAPLPAPAYPVDVTEGIADWGMLGNGPDPACTSHPNGVGD
Ga0207664_102145754	3300025929	Agricultural Soil	MSSSRDAGLRGRLPKKPPADRFKIRYLSAYLASPLPAPVYPVDVTGGLTDWEMLGNGPDPTCTTHPDGVGDCTFAGRQHYRMAKAAAEKETETWE
Ga0209266_11877262	3300026327	Soil	MSTTRMAGRRGRLAVKPPAERFAIQYLSSYLPAPLPAPAYPVDVSGGITDWDMLGNGPDPACTSHPNGVGDCTFAGRQHYRM
Ga0209056_107376692	3300026538	Soil	MSTTRMAGRRGRLAVKPPAQRFAIQYLSSYLTAPLPAPAYPIDVTGGITDWGMLGNGPDPACT
Ga0209218_11418611	3300027505	Forest Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCT
Ga0209040_101176001	3300027824	Bog Forest Soil	MPSTRTAGRRGRLPKKPVGQRFNIQYLSAYLTSPLPAPAYPVDVTAGITDWGMLGNGPDPTCTTHPKGVGDCTFAGRQHYLCSDQ
Ga0209275_103984521	3300027884	Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCTFAGREHYRRAKAAAGHETEKWEDSNQLVAEYLRYDH
Ga0209624_101565343	3300027895	Forest Soil	MTQTRKAGLRGRLPKKPPAQRFNIQYLSAYLTAPLPAPVYPIDVTAGITDWEMLGNGPDPTCTTHPKGVGDCTFAGRQHYRMAKAAVAD
Ga0209006_100385286	3300027908	Forest Soil	MTQTRKAGLRGRLPKKPPAQRFNIQYLSAYLTAPLPAPVYPIDVTAGITDWEMLGNGPDPTCTMHPKG
Ga0209006_102590202	3300027908	Forest Soil	MASTRNAGLRGRLPKKSPAERFNIQYLSAYLTSPLPAPTYPVDVTGGITDWDMLGNGPDPTCTTHPKGVGDCTFA
Ga0209006_108940441	3300027908	Forest Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCTFAGREHYRR
Ga0265334_102734891	3300028573	Rhizosphere	VPVRTAGLRGRLPKKPPAERFNIQYLTSYLTSPLPAPSYPVDVTSGITDWQMLGNGPDPTCTTHPDGVGDCTFAGRQHYRMAKAAAEAE
Ga0302219_103401281	3300028747	Palsa	VTRTPGLRGRLPVKPPGERFAIDWVSEYLREPLPAPTYPIDVTGGIGATSWGMDGNGPDPTCTTYPNGVGDC
Ga0302235_102750042	3300028877	Palsa	MPEIRVPGLRGRRPVKPPGQRFAIQYLSDYLTTPLPAPAYPVDVTGGVTEWGMLGNGPDKTCTTHPNGVGDCTFAGRQHNRMAKAAAGQEAEKWETSNQLVA
Ga0308309_118381071	3300028906	Soil	MPDIRIAGHRGRLPVKPPAQRFAIQYLSGYLRTPLPAPVYPVDVTGGITDWGMLGNGPDKTCTTHPDGVGDCTFAGREHYRRAKAAAG
Ga0222748_10382102	3300029701	Soil	MSTTRSAGRRGRLPVKPPAERFAIKYLSSYLPAPLPAPAYPIDVTGGITDWGMLGNGPDPACTTHPNGVGDCTFAGRQH
Ga0311369_103696692	3300029910	Palsa	MTPTRSAGLRGRLPKKSPAERFNIQYLSAYLTSPLPAPAYPIDVTAGITDWEMLGNGPDPTCTTHPKGVGDCT
Ga0311339_111321822	3300029999	Palsa	MSLGRSAGLRGRQPVKPPGERYAINFLHRYLRVPLGAPAYPIDVSGGITEWQMLGNGPDPTLTVNGGRPVGDCTFAGRQHLRMAKAAAAGRIETWETTNELVSEY
Ga0302181_101291261	3300030056	Palsa	VTNPVRVPGLRGRLPVKPPGERFAIKYVHEYLREQLPAPAYPIDVTGGIGDTSWGMAGNGPDPTCTTYPDGVGDCSFAGELHYKMAKAACYGLDE
Ga0311353_102314204	3300030399	Palsa	VTRTPGLRGRLPVKPPGERFAIDWVSEYLREPLPAPTYPIDVTGGIGATSWGMDGNGPDPTCTTYPNGVGDCSF
Ga0311353_111350842	3300030399	Palsa	MTSTRTAGLRGRLPKKPPGERFNIQYLSAYLTSPLPVPVYPVDVTAGITDWLMLGNGPDPTCTTHPKG
Ga0311357_114680771	3300030524	Palsa	VPNIRVAGLLGKHPVKPPAERLPIKYLSAYLREPLPAASYPVDVTGGIEDDEWGMCANGPDPSCTSHPNGLGDCSFAGREHYQMAKAACNGEHETPE
Ga0311357_118022671	3300030524	Palsa	MTPTRRAGLRGRLPKKPPAERFNIQYLSAYLTSPLPAPAYPVDVTAGISDWEMLGNGPDPTCTTNPNGVGDCTFAGRQHNRMAKAAAAPETEVWESSNALVAEYL
Ga0307482_11893501	3300030730	Hardwood Forest Soil	MPTARSAGRRGRLPVKPPAERFPIQWVSSYLGLPLPPPVYPVDVTAGITEWGMLGNGP
Ga0302325_117215342	3300031234	Palsa	VPNIRVAGLLGKHPVKPPAERLPIKYLSAYLREPLPAASYPVDVTGGIEDDEWGMCANGPDPSCTSHPNGLGDCSFAGREHY
Ga0302324_1014994061	3300031236	Palsa	VSLERTSGLRGRQAAKPPSERFAIDYLPRYLRSPLSTPTYPIDVSAGITEWHMLGNGPDPTLTVNGGRPVGDCTFAGRQHLRMAKA
Ga0302324_1025403492	3300031236	Palsa	MSDARTAGLRGRLPVKPPAERFAIQYLSSYLRTALPTPSYPIDVSGAITDWQMLGNGPDPTLTVNKGQPVGDCTFAGRQHLRMAKAAAADT
Ga0302326_128947801	3300031525	Palsa	MSLGRSAGLRGRQPVKPPGERYAINFLHRYLRVPLGAPAYPIDVSGGITEWQMLGNGPDHTLTVNGGRPVGDCTFAGRQHLRMAKAAAAGRIETWETT
Ga0318534_108455472	3300031544	Soil	MAHARHAGRRGRLPVKPPGERFPIQYLGAYLTQPLPAPQYPVDVSGGITDWGMLGNGPDPACTSHPNGVGDCTFAGHQ
Ga0318541_104793062	3300031545	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLG
Ga0318571_104033591	3300031549	Soil	MPSTRSAGRRGRKPVKPPGERFAIQYLSSYLGIPLPPPAYPVDVTGGITDWGMLGNGPDPTLPKYPDGVGDCTFAGRQHNRMAKAAAGGEHEKWETSETLVAEYLTYDKG
Ga0307508_104680111	3300031616	Ectomycorrhiza	MPTRNAGLRGRLPKKPPAERFNIQYLTSYLTSPLPAPTYPIDVTSGITDWQMLGNGPDPTCTTHPNGVGDCTFAGRQHYRMAKAA
Ga0318555_108091381	3300031640	Soil	MPSARTAGLRGRLPKKPPAERFNIQYLTSYLTSPLPAPTYPVDVTAGITDWKMLGNGPDPTC
Ga0310686_1010219792	3300031708	Soil	MPTTREAGLRGRLPKKPPSQRFKIQYLSAYLTSPLPAPVYPIDVTGGITDWDMLGNGPDPTCTTHP
Ga0310686_1038368942	3300031708	Soil	MPEIRVPGLRGRRPVKPPGQRFAIQYLSDYLTTPLPAPTYPVDVTGGVTEWCMLGNGPDKTCTTHPNGVGDCTFAGRQHNRMAKAAAGHETE
Ga0318496_102142711	3300031713	Soil	MPSTRSAGRRGRKPVKPPGERFAIQYLSSYLGIPLPPPAYPVDVTGGITDWGMLGNGPDPTLPKYPDGVGDCTFAGRQHNRMAKAAAGGEQEKWETSEALVAEY
Ga0307476_104242872	3300031715	Hardwood Forest Soil	MPSRRSAGRRGRLPVKPPAERFAINYLSAYLSTPLPPPVYPVDVSAGIVDWGMLGNGPDPAVPQYPTGVLDCTFAARQHYR
Ga0307474_115237781	3300031718	Hardwood Forest Soil	MPDIRPAGLRGRLPVKPPGARFNIQWLSSYLATPLPAPVYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCTFAGREHYRRAKAAAGHETEKWEDSNHLVAEYLRYDHGQ
Ga0306918_113101262	3300031744	Soil	MPTTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVGDCTFAGRQHYRMAKATAGSEQEKWETSEALVTEYLA
Ga0318502_104198832	3300031747	Soil	MPATRSAGRRGRMPVKPPAERFKIQYLSSYLNTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPQGLSDCTFAGRQHY
Ga0318546_105257892	3300031771	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVGDCTFAGRQHYRMAKATAGSEQEKWETSEALVTEYLAYDK
Ga0318547_103874392	3300031781	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPHGLRDC
Ga0318547_110191321	3300031781	Soil	MATQRSAGRRGRLPVKPPAERFAIQYLSGYLTTPLPPPVYPVDVTGGITDWGMLGNGPDPTLP
Ga0318557_101975002	3300031795	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCT
Ga0318576_101205821	3300031796	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVG
Ga0318565_103756252	3300031799	Soil	MPTTRSAGRRGRLPVKPPAERFAIQYLSSYLGTPLPLPAYPVDVTGGVTDWGMLGNGPDPTLPAYPGGVSDCTFAGRQHNRMAKAAAGGEQEQWETTEALVAEYVA
Ga0318497_104825252	3300031805	Soil	MPSTRSAGRRGRKPVKPPAERFAIQYLSSYLGTPLPPPAYPVDVTGGITDWGMLGNGPDPTLPKYPDGVGDCTFAGRQHNRMAKAAAGGEQ
Ga0318567_106852921	3300031821	Soil	MATKRSAGRRGRLPVKPPAERFAIQYLSNYLTTPLPPPVYPVDVTGGITDWGMLGNGPDPTLPAYPNGVSDCTFAGRQHNRMAKAAAAGEQEQWETTEAL
Ga0318499_100976031	3300031832	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVGDCTFAGRQHYRMAKATAGS
Ga0310917_110747651	3300031833	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPHGLRDCT
Ga0318495_104971581	3300031860	Soil	MPSTRSAGRRGRKPVKPPGERFAIQYLSSYLGIPLPPPAYPVDVTGGITDWGMLGNGPDPTLPKYPDGVGDCTFAGRQHNRMAKAAAGGEQEKWETSEALVAE
Ga0306925_113529231	3300031890	Soil	MTHSRPAGLRGRLPVKPPGKRFNIQYVSTYLKRPLPAPSYPIDVSGGVVDWQMLGNGPDPTLHVHGGQPVGDCTFAGRQHLRMAKAAAGQEVEKWETTDQLVT
Ga0318520_108642511	3300031897	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPHGLRDCTFAGRQHYRMAKAAAGGEQEEWETCEALAAEYL
Ga0310912_109387191	3300031941	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTS
Ga0310913_107498481	3300031945	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVGDCTFAGRQHYRMAKAAAGSEQEKWETSEALVTEYLAYD
Ga0306926_122443301	3300031954	Soil	MPAARSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPDYPHGLRDCTFAGRQHYRM
Ga0318530_100225831	3300031959	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDPTCTSHPNGVGDCTF
Ga0307479_111457821	3300031962	Hardwood Forest Soil	MPSTRKAGLRGRLPKKPPAERFNIQYLSAYLSTPLPAPVYPVDVTAGITDWGMLGNGPDPTCTKHPQGVGDCTFAGRQHYRMAKAAAAGE
Ga0307479_119795211	3300031962	Hardwood Forest Soil	MPSTRKAGLRGRLPKKPPAERFNIQYLSAYLTSPLPAPAYPIDVTDGITDWEMLGNGPDPTCTKHPDGVGDCTFAGRQHYRMAKAAAAGETEK
Ga0318531_103158782	3300031981	Soil	MATKRSAGRRGRLPVKPPAERFAIQYLSSYLGTPLPLPAYPVDVTGGVTDWGMLGNGPDP
Ga0318563_103121792	3300032009	Soil	MPTTRSAGRRGRLPVKPPAERFAIQYLSSYLGTPLPLPAYPVDVTGGVTDWGMLGNGPDPTLPAYPG
Ga0318569_100338763	3300032010	Soil	MPKTRSAGRRGRLPVKPPAERFAIQYLSSYLTTPLPPPVYPVDVSAGIVDWGMLGNGPDP
Ga0318569_103389202	3300032010	Soil	MAHARHAGRRGRLPVKPPGERFPIQYLGAYLTQPLPAPQYPVDVSGGITDWGMLGNGPDPACTSHPN
Ga0318559_104153241	3300032039	Soil	MATKRSAGRRGRLPVKPPAERFAIQYLSNYLTTPLPPPVYPVDVTGGITDWGMLGNGPDPTLPAYPNGVSDCT
Ga0318575_101616593	3300032055	Soil	MAHARHAGRRGRLPVKPPGERFPIQYLGAYLTQPLPAPQYPVDVSGGITDWGMLGNGPDPACTSHPNGVGDCTFAGRQHYKMAKANAY
Ga0318505_104300701	3300032060	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPHGLRDCTFAGRQHYRMAKAAAGGEQEEWETCEALAAEYLAYDNN
Ga0318524_101046813	3300032067	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPEYPHGLRDCTFAGRQHYRMAKAAAGGEQEEWETCEALAAEYLAYD
Ga0318553_106697421	3300032068	Soil	MPSTRSAGRRGRKPVKPPGERFAIQYLSSYLGIPLPPPAYPVDVTGGITDWGMLGNGPDPALPKYPDGVSDCTFAGRQHNRMAKAAAGGEQEKWETSDALVAEYLTYD
Ga0318577_105371172	3300032091	Soil	MPATRSAGRRGRLPVKPPAERFKIQYLSSYLSTPLPAPVYPVDVSAGITDWGMLGNGPDPNLPDYPHGLRDCTFAGRQHYRMAKAAAGGEQEQWETCE
Ga0306920_1005540552	3300032261	Soil	MSSTRSAGRRGRKPVKPPAERFAIQYLSSYLGTPLPPPAYPVDVTGGITDWGMLGNGPDPTLPKYPDGVSDCTFAG
Ga0348332_108701091	3300032515	Plant Litter	MSTTRSAGRRGRLPVKPPAERFAIKYLSSYLPAPLPAPAYPIDVTGGITDWGMLGN
Ga0316221_12678862	3300032665	Freshwater	VTIPVRVPGLRGRLPVKPAGEKFAIGYLSDYLSEPLPAPSYPVDVTGGIGDTDWGMLGNGPDPTCTTYPSGVGDCTFAGRQHYKMAK
Ga0335078_100175371	3300032805	Soil	MPDIRTAGLRGRRPVKPPAQRFNIQYVSSYLSTPLPPPAYPVDVSAGITDWGMLGNGPDKTCTTHPDGVGDCSFAGRQHYRMAKAAAGHEQETWE
Ga0335070_108453202	3300032829	Soil	MPTRTAGLRGRLPKKPPAERFNIQYLTSYLTSPLPAPAYPVDVTSGITDWQMLGNGPDPTCTTHPNGVGDCTFAGRQHYRMAKAAAEGETETWESS
Ga0335074_115532621	3300032895	Soil	MPAPRPAGLRGRKPKKPPGERFNIQFVTSYLKAPLSAPSYPIDVSGGITAWQMLGNGPDPTLTVNDGKPVGDCTF
Ga0335073_100173441	3300033134	Soil	MTQSRQAGLRGRLPVKPPGERFNIQYVSSYLKEPLPAPTYPVDVSGGIVDWQMLGNGPDPTLHVHDGK
Ga0335073_119955891	3300033134	Soil	MPRIAGHRGRLPAKTGSDKLAIRYVHEYAAQPLPAPVYPVDVSGGITDWLMLGNGPDPTCTTHPDGV
Ga0314866_024148_595_906	3300033807	Peatland	MDMPEVRTAGLRGRRPVKPPAERFRIQYLSGYLSSPLPAPSYPVDVTAGISEWGMLGNGPDPTCTTNPQGVGDCTFAGRQHYKMAKAGAGGESEQWETSDQLVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065374

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences