Metagenome / Metatranscriptome Family F065331

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065331
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	48 residues
Representative Sequence	MPKSDHQAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN
Number of Associated Samples	62
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.83 %
% of genes near scaffold ends (potentially truncated)	16.54 %
% of genes from short scaffolds (< 2000 bps)	72.44 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil (19.685 % of family members)
Environment Ontology (ENVO)	Unclassified (63.780 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.33% β-sheet: 0.00% Coil/Unstructured: 54.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03372	Exo_endo_phos	7.14
PF13470	PIN_3	4.76
PF06172	Cupin_5	3.97
PF03743	TrbI	1.59
PF00075	RNase_H	1.59
PF04326	AlbA_2	1.59
PF00291	PALP	1.59
PF01740	STAS	0.79
PF00015	MCPsignal	0.79
PF00589	Phage_integrase	0.79
PF00656	Peptidase_C14	0.79
PF00005	ABC_tran	0.79
PF00248	Aldo_ket_red	0.79
PF00939	Na_sulph_symp	0.79
PF02915	Rubrerythrin	0.79
PF13751	DDE_Tnp_1_6	0.79
PF02899	Phage_int_SAM_1	0.79
PF12710	HAD	0.79
PF00782	DSPc	0.79
PF12281	NTP_transf_8	0.79
PF01527	HTH_Tnp_1	0.79
PF05163	DinB	0.79
PF12728	HTH_17	0.79
PF14338	Mrr_N	0.79
PF12811	BaxI_1	0.79
PF13604	AAA_30	0.79
PF05698	Trigger_C	0.79
PF13545	HTH_Crp_2	0.79
PF00583	Acetyltransf_1	0.79
PF09903	DUF2130	0.79
PF05016	ParE_toxin	0.79
PF00149	Metallophos	0.79
PF13561	adh_short_C2	0.79
PF02805	Ada_Zn_binding	0.79
PF00072	Response_reg	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	3.97
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.59
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	1.59
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	1.59
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.79
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.79
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	0.79
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.79
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.79
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.87 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.87 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.72 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.79 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.79 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	4.72 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.79 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.79 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	4.72 %
Lutibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Lutibacter	0.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.79 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	4.72 %
unclassified Lutibacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Lutibacter → unclassified Lutibacter	0.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.79 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.87 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	4.72 %
Lutibacter sp. BRH_c52	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Lutibacter → unclassified Lutibacter → Lutibacter sp. BRH_c52	0.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.79 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009552\|Ga0116138_1091266	Not Available	848	Open in IMG/M
3300009628\|Ga0116125_1185558	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300009638\|Ga0116113_1066965	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300009645\|Ga0116106_1248602	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009649\|Ga0105855_1301580	Not Available	509	Open in IMG/M
3300009665\|Ga0116135_1079858	Not Available	1164	Open in IMG/M
3300009665\|Ga0116135_1088694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300009665\|Ga0116135_1154083	Not Available	860	Open in IMG/M
3300009665\|Ga0116135_1408156	Not Available	552	Open in IMG/M
3300009759\|Ga0116101_1042925	Not Available	957	Open in IMG/M
3300009759\|Ga0116101_1183219	Not Available	527	Open in IMG/M
3300010343\|Ga0074044_10772699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300012204\|Ga0137374_10381781	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300012206\|Ga0137380_10094134	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300012209\|Ga0137379_10058786	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3702	Open in IMG/M
3300012350\|Ga0137372_10364412	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300012350\|Ga0137372_10585039	Not Available	820	Open in IMG/M
3300012354\|Ga0137366_10012936	All Organisms → cellular organisms → Bacteria	6554	Open in IMG/M
3300014160\|Ga0181517_10066362	Not Available	2170	Open in IMG/M
3300014160\|Ga0181517_10156472	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300014161\|Ga0181529_10007436	All Organisms → cellular organisms → Bacteria	10922	Open in IMG/M
3300014161\|Ga0181529_10045617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3144	Open in IMG/M
3300014161\|Ga0181529_10236414	Not Available	1050	Open in IMG/M
3300014167\|Ga0181528_10025475	All Organisms → cellular organisms → Bacteria	3394	Open in IMG/M
3300014167\|Ga0181528_10348374	Not Available	804	Open in IMG/M
3300014167\|Ga0181528_10411069	Not Available	738	Open in IMG/M
3300014167\|Ga0181528_10456226	Not Available	700	Open in IMG/M
3300014167\|Ga0181528_10729328	Not Available	554	Open in IMG/M
3300014169\|Ga0181531_10350136	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300014169\|Ga0181531_10712227	Not Available	624	Open in IMG/M
3300014201\|Ga0181537_10380083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	969	Open in IMG/M
3300014491\|Ga0182014_10409299	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300014492\|Ga0182013_10609702	Not Available	555	Open in IMG/M
3300014493\|Ga0182016_10378933	Not Available	843	Open in IMG/M
3300014493\|Ga0182016_10435813	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300014493\|Ga0182016_10502350	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300014499\|Ga0182012_10184642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1474	Open in IMG/M
3300014499\|Ga0182012_10188136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1457	Open in IMG/M
3300014499\|Ga0182012_10739388	Not Available	626	Open in IMG/M
3300014502\|Ga0182021_10959710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1028	Open in IMG/M
3300014655\|Ga0181516_10095827	Not Available	1497	Open in IMG/M
3300014655\|Ga0181516_10683541	Not Available	532	Open in IMG/M
3300014838\|Ga0182030_10000719	All Organisms → cellular organisms → Bacteria	64548	Open in IMG/M
3300014838\|Ga0182030_10171384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2686	Open in IMG/M
3300014838\|Ga0182030_10366528	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300014838\|Ga0182030_10489118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1234	Open in IMG/M
3300014838\|Ga0182030_10634388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300014838\|Ga0182030_10744303	Not Available	909	Open in IMG/M
3300014838\|Ga0182030_10814472	Not Available	852	Open in IMG/M
3300014838\|Ga0182030_11354323	Not Available	596	Open in IMG/M
3300017946\|Ga0187879_10644270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300017948\|Ga0187847_10037972	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Lutibacter → unclassified Lutibacter → Lutibacter sp. BRH_c52	2820	Open in IMG/M
3300017948\|Ga0187847_10770062	Not Available	544	Open in IMG/M
3300017988\|Ga0181520_10001598	All Organisms → cellular organisms → Bacteria	45536	Open in IMG/M
3300017988\|Ga0181520_10006027	All Organisms → cellular organisms → Bacteria	18841	Open in IMG/M
3300017988\|Ga0181520_10022462	All Organisms → cellular organisms → Bacteria	7094	Open in IMG/M
3300017988\|Ga0181520_10601368	Not Available	763	Open in IMG/M
3300017988\|Ga0181520_10981573	Not Available	560	Open in IMG/M
3300018016\|Ga0187880_1492497	Not Available	501	Open in IMG/M
3300018017\|Ga0187872_10471801	Not Available	523	Open in IMG/M
3300018034\|Ga0187863_10427133	Not Available	739	Open in IMG/M
3300018042\|Ga0187871_10518766	Not Available	660	Open in IMG/M
3300018043\|Ga0187887_10216584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1137	Open in IMG/M
3300019082\|Ga0187852_1007752	All Organisms → cellular organisms → Bacteria	6255	Open in IMG/M
3300019256\|Ga0181508_1325463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300019260\|Ga0181506_1032231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300019787\|Ga0182031_1426085	Not Available	1180	Open in IMG/M
3300022824\|Ga0224518_1007327	Not Available	761	Open in IMG/M
3300022863\|Ga0224532_1017451	Not Available	926	Open in IMG/M
3300023091\|Ga0224559_1081207	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300023091\|Ga0224559_1121335	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300023091\|Ga0224559_1245725	Not Available	606	Open in IMG/M
3300025612\|Ga0208691_1047083	Not Available	981	Open in IMG/M
3300028084\|Ga0255356_1040084	Not Available	893	Open in IMG/M
3300028566\|Ga0302147_10060391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1325	Open in IMG/M
3300028779\|Ga0302266_10045028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2005	Open in IMG/M
3300028874\|Ga0302155_10261901	Not Available	747	Open in IMG/M
3300029913\|Ga0311362_11083665	Not Available	613	Open in IMG/M
3300029913\|Ga0311362_11143927	Not Available	587	Open in IMG/M
3300029914\|Ga0311359_10486720	Not Available	943	Open in IMG/M
3300030004\|Ga0302186_10168469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	767	Open in IMG/M
3300031261\|Ga0302140_10679914	Not Available	756	Open in IMG/M
3300031261\|Ga0302140_10783035	Not Available	684	Open in IMG/M
3300031524\|Ga0302320_10534099	Not Available	1403	Open in IMG/M
3300031759\|Ga0316219_1026870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	2619	Open in IMG/M
3300031759\|Ga0316219_1040551	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300031813\|Ga0316217_10000320	All Organisms → cellular organisms → Bacteria	70194	Open in IMG/M
3300031813\|Ga0316217_10000830	All Organisms → cellular organisms → Bacteria	42207	Open in IMG/M
3300031813\|Ga0316217_10002450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22314	Open in IMG/M
3300031813\|Ga0316217_10405188	Not Available	508	Open in IMG/M
3300031884\|Ga0316220_1011915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4898	Open in IMG/M
3300032160\|Ga0311301_12772119	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032665\|Ga0316221_1102297	Not Available	1048	Open in IMG/M
3300032828\|Ga0335080_11355369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300033402\|Ga0326728_10015582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15769	Open in IMG/M
3300033402\|Ga0326728_10049782	All Organisms → cellular organisms → Bacteria	6157	Open in IMG/M
3300033402\|Ga0326728_10587614	Not Available	872	Open in IMG/M
3300033755\|Ga0371489_0203034	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300033888\|Ga0334792_013655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3097	Open in IMG/M
3300033888\|Ga0334792_062465	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300033888\|Ga0334792_063672	Not Available	1104	Open in IMG/M
3300033888\|Ga0334792_171081	Not Available	537	Open in IMG/M
3300034163\|Ga0370515_0001941	All Organisms → cellular organisms → Bacteria	10392	Open in IMG/M
3300034163\|Ga0370515_0016952	Not Available	3380	Open in IMG/M
3300034163\|Ga0370515_0026165	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300034163\|Ga0370515_0035217	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300034163\|Ga0370515_0040658	Not Available	2076	Open in IMG/M
3300034163\|Ga0370515_0060729	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300034163\|Ga0370515_0087382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1350	Open in IMG/M
3300034163\|Ga0370515_0441601	Not Available	549	Open in IMG/M
3300034163\|Ga0370515_0524751	Not Available	500	Open in IMG/M
3300034199\|Ga0370514_000621	All Organisms → cellular organisms → Bacteria	7618	Open in IMG/M
3300034199\|Ga0370514_001016	Not Available	6082	Open in IMG/M
3300034199\|Ga0370514_001016	Not Available	6082	Open in IMG/M
3300034199\|Ga0370514_045982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1094	Open in IMG/M
3300034199\|Ga0370514_051740	Not Available	1032	Open in IMG/M
3300034199\|Ga0370514_052327	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300034199\|Ga0370514_064439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300034199\|Ga0370514_091884	Not Available	772	Open in IMG/M
3300034199\|Ga0370514_119514	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300034282\|Ga0370492_0007905	All Organisms → cellular organisms → Bacteria	4320	Open in IMG/M
3300034282\|Ga0370492_0018841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2832	Open in IMG/M
3300034282\|Ga0370492_0020550	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300034282\|Ga0370492_0035190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2056	Open in IMG/M
3300034282\|Ga0370492_0178154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300034282\|Ga0370492_0299296	Not Available	653	Open in IMG/M
3300034282\|Ga0370492_0373461	Not Available	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.63%
Aquatic	Environmental → Aquatic	39.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.73%
Freshwater	Environmental → Aquatic → Freshwater	39.37%
Peat	Environmental → Terrestrial → Peat	18.90%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	36.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.51%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	21.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.66%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	6.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.51%

Habitat	Taxonomy	Distribution
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	19.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	15.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	13.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.66%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.87%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	6.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022824	Peat soil microbial communities from Stordalen Mire, Sweden - IR.B.S.T-25	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116138_10912662	3300009552	Peatland	MPKSKRQSALLAIEKVLALLRSVNTLEGTDKDGVEHLLQMAVDNLKN*
Ga0116125_11855581	3300009628	Peatland	HKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN*
Ga0116113_10669654	3300009638	Peatland	MPKSNRQSALLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN*
Ga0116106_12486021	3300009645	Peatland	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAIENLKN*
Ga0105855_13015802	3300009649	Permafrost Soil	ATLHAIEKALALMHSMQTLEGTDKDGVEHLLGMAVENLKQGAE*
Ga0116135_10798582	3300009665	Peatland	TMPESNQESALHAIEKVLTLLRSVQTLEGTDKDGVEHLLEMAAESLREK*
Ga0116135_10886943	3300009665	Peatland	MPKTESNRQSALLSIEKVLTLLRSVQALEGTDKDGVEHLLEMAVENLKK*
Ga0116135_11540832	3300009665	Peatland	MSKSSHQAALLAIEKVLALLRSVKTLEGTDKDGGEHLLQMAVDNLKN*
Ga0116135_14081561	3300009665	Peatland	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVEKLKN*
Ga0116101_10429251	3300009759	Peatland	MPKSNRQSALLAIEKVLALLRSVNTLEGTDKDGVEHLLQLAVDNLKH*
Ga0116101_11832191	3300009759	Peatland	MPTTKSDHQAALLSIQKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLK
Ga0074044_107726991	3300010343	Bog Forest Soil	MPKPKSNHQAALVAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0137374_103817812	3300012204	Vadose Zone Soil	MPKPKSNHQATLRAIEKALTLLRSVQTLEGTDKDGVEHLLEMAVENLRSECGRG*
Ga0137380_100941341	3300012206	Vadose Zone Soil	MFRYNQHGENTMSESNQESIERALALMHSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0137379_100587862	3300012209	Vadose Zone Soil	MPKSDHKPALLAIEKVLILLRSVRTWEGTDKDGVEHLLEMAAENLRTNCVGAEG*
Ga0137372_103644122	3300012350	Vadose Zone Soil	MPKPKSNHQATLRAIEKALTLLRSVQTLEGTDKDGVEHLLEMAVENLRSERGKG*
Ga0137372_105850392	3300012350	Vadose Zone Soil	MPKPTCNHQAALEAIEKVLALMRSVQTLEGTDKDGVEHLLEMALENLKK*
Ga0137366_100129369	3300012354	Vadose Zone Soil	MPKPKSNHQAALRAIEKALTLLRSVQTLEGTDKDGVEHLLEMAVENLRSERGKG*
Ga0181517_100663623	3300014160	Bog	MSESSHQAALLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAIENLKN*
Ga0181517_101564723	3300014160	Bog	MPTTKTNHETALLSIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0181529_1000743612	3300014161	Bog	MPKTKSDHQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVATLKK*
Ga0181529_100456174	3300014161	Bog	MSESSHQAALLAIEKVLALLRSVKTLDSTDKDGVEHLLQMAVDNLKN*
Ga0181529_102364142	3300014161	Bog	MSESNHQAALLAIEKVLALLRSVKTLEGTDKDGVEHLLEMAVEKLKN*
Ga0181528_100254752	3300014167	Bog	MPTTKSTHQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0181528_103483742	3300014167	Bog	NITMSKSSHQAALLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDSLKN*
Ga0181528_104110692	3300014167	Bog	MPTIKSNHQSALLAIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLRER*
Ga0181528_104562261	3300014167	Bog	MPKPNHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN*
Ga0181528_107293281	3300014167	Bog	MPKPKSNHETALHAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVEKLKN*
Ga0181531_103501362	3300014169	Bog	MPKTKSNHEAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAAENLKK*
Ga0181531_107122271	3300014169	Bog	MSESNHQAALLAIEKVLALLRSVKTLEGTDKDCVEHLLQMAVDSL*
Ga0181537_103800832	3300014201	Bog	MSESDHQATLLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN*
Ga0182014_104092992	3300014491	Bog	MPKTNHQAALLAIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVEKLKN*
Ga0182013_106097022	3300014492	Bog	MPTTKSNHQAALLSIEKVLALLRSVQTLDGTDKDGVEHLLEMAVENLKK*
Ga0182016_103789332	3300014493	Bog	MSESNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHLLEMAVEKLKN*
Ga0182016_104358131	3300014493	Bog	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0182016_105023501	3300014493	Bog	MPKSKSNQQAAIEAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0182012_101846421	3300014499	Bog	MPESNHQATLLAIEKVLALLRSVKTLEGTDKDGVEH
Ga0182012_101881363	3300014499	Bog	MPKSNHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK*
Ga0182012_107393881	3300014499	Bog	MPQSTYQAAVLAIERVLALLQSVQTLEGTDKDGVEHLLRMAVDNLKAGQPES*
Ga0182021_109597102	3300014502	Fen	MSESNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN*
Ga0181516_100958272	3300014655	Bog	MSKSSHQAALLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDKLKN*
Ga0181516_106835412	3300014655	Bog	VVTAAKLNTSPVPNPKSNHQSALLSIEKVLTLLHSVQTLEGTDKDGVEHLLEMAVENLKHGAE*
Ga0182030_1000071946	3300014838	Bog	MPKPKSNHQAALEAIEKVLALLRSVQTLEGTDKDGVEHLLEMAAESLRER*
Ga0182030_101713846	3300014838	Bog	MPKSNRQSALLAIEKVLALLRSVNTLEGTDKDGVEHLLQMAVDNLKN*
Ga0182030_103665282	3300014838	Bog	MPESNHQATLLAIEKVLALLRSVKMLEGTDKDGVEHILQMAVDSLKN*
Ga0182030_104891182	3300014838	Bog	MSESNHQAALLAIEKVIALLRSVKMLEGTDKDGVEHLLQMAVDNLKN*
Ga0182030_106343882	3300014838	Bog	MPKSDRHSALLAIEKVLALLRSVKTLEGTDKDGVEHLLQLAVDNLKH*
Ga0182030_107443031	3300014838	Bog	MPKSNRQSSLLAIEKVLALLRSVKTLEGTDKDGVEH
Ga0182030_108144722	3300014838	Bog	MPTTKSDHQSALLSIEKVLTLLHSVQTLEGTDKDGVEHLLEMAVENLKQGAE*
Ga0182030_113543232	3300014838	Bog	MPKSDHKPALLAIEKVLLLLRSVQTLEGTDKDGVEHLLEMAAENLRTDCVWPASEL*
Ga0187879_106442701	3300017946	Peatland	MPKTKSNNQAALQSIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0187847_100379722	3300017948	Peatland	MPKPKSNHQAALLAIDKVLTLLRSVQNLEGTDKDGVEHLLEMAAENLRE
Ga0187847_107700622	3300017948	Peatland	MPTTKSDHQAALLSIQKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLKQRAG
Ga0181520_1000159840	3300017988	Bog	MSESSHQAALLAIEKVLALLRSVKTLDSTDKDGVEHLLQMAVDNLKN
Ga0181520_1000602719	3300017988	Bog	MPKTKSDHQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVATLKK
Ga0181520_100224629	3300017988	Bog	MPKTTCNHQAALLAIEKVLALLRSVHTLEDTDKVGIEHLLEMAVENLKK
Ga0181520_106013682	3300017988	Bog	MSESNHQAALLAIEKVLALLRSVKMLAGTDKDGVEHLLQMAVDNLKN
Ga0181520_109815732	3300017988	Bog	MFRKIDSIPLPKSKSNQQAALISIEKVLTLLRSVQMLEVTDKDGVEHLLEMAIENLKK
Ga0187880_14924971	3300018016	Peatland	MSESNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDSLKN
Ga0187872_104718012	3300018017	Peatland	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAFENLKN
Ga0187863_104271332	3300018034	Peatland	MSESNHQAALLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDSLKN
Ga0187871_105187661	3300018042	Peatland	MPKPDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0187887_102165842	3300018043	Peatland	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN
Ga0187852_10077528	3300019082	Peatland	MPNSNYQAAVLAIERVLALIQSVQTLEGTDKDGVEHLLRMAVENLKAGQPES
Ga0181508_13254632	3300019256	Peatland	MPTTKTNHETALLSIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0181506_10322311	3300019260	Peatland	KSTHQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0182031_14260852	3300019787	Bog	MPKSDHKAALLAIEKVLALLRSVKMLEGTDKDGVEHLLEMAVEKLKN
Ga0224518_10073272	3300022824	Soil	MPTTQSNHDAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAIENLKQG
Ga0224532_10174511	3300022863	Soil	MSESNHQDALLAIEKVLALLRSVVTLEGTDKDGVEHLLQMAVDNLKD
Ga0224559_10812072	3300023091	Soil	MSESNHQAALLAIEKVIALLRSVKMLEGTDKDGVEHLLQMAVDNLKN
Ga0224559_11213353	3300023091	Soil	SDHKAALLAIEKVLALLHSVKTLEGTDKDGVEHLLEMAVEKLKN
Ga0224559_12457251	3300023091	Soil	MPKSDHKAALLAIEKVLALLRSVKTLEGTDKDGVE
Ga0208691_10470831	3300025612	Peatland	MSESNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVD
Ga0255356_10400841	3300028084	Soil	MPKTKSNQQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVENLKQGAE
Ga0302147_100603913	3300028566	Bog	MSESDHQATLLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSL
Ga0302266_100450284	3300028779	Bog	MSESDHQATLLAIEKVLALLRSVKTLEGTDKDGVEH
Ga0302155_102619012	3300028874	Bog	MSESNHQAALLAIEKVLALLRSVKTLEGTDKDCVEHLLQMAVDSL
Ga0311362_110836651	3300029913	Bog	MPKCDHEATLLSIEKVLALLRSVQTLEGTDKDGVEHLLEMAIENLKN
Ga0311362_111439272	3300029913	Bog	MSESNHQAALLAIEKVLALLRSVKTLEGTDKDCVEHLLQMAV
Ga0311359_104867202	3300029914	Bog	LLAIEKVLALLRSVKTLEGTDKDCVEHLLQMAVDSL
Ga0302186_101684693	3300030004	Bog	MSESDHQATLLAIEKVLALLRSVKTLEGTDKDGVEHI
Ga0302140_106799141	3300031261	Bog	MPKPDYQTALVKIEKVLELLRSVHTLEGTDKDGVEHLLQMAVESLKG
Ga0302140_107830352	3300031261	Bog	MPQSTYQAAVLAIERVLALLQSVQTLEGTDKDGVEHLLRMAVDNLKAGQPES
Ga0302320_105340992	3300031524	Bog	MPKSDHKPALLAIEKVILLLRSVQTLEGTDKDGVEHLLEMAAENLRIDCEPVS
Ga0316219_10268703	3300031759	Freshwater	MSECNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDSLKN
Ga0316219_10405511	3300031759	Freshwater	MSKSSHQAALLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN
Ga0316217_1000032055	3300031813	Freshwater	MPTTKSNHQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAIENLKK
Ga0316217_1000083014	3300031813	Freshwater	MPKPKSNHQAALEAIEKVRALLRSVQTLQGTDKDGVEHLLAMAAENLKK
Ga0316217_1000245011	3300031813	Freshwater	MPKSDHQAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN
Ga0316217_104051881	3300031813	Freshwater	MPKSDYKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLQMAVENLKN
Ga0316220_10119151	3300031884	Freshwater	HQAALLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN
Ga0311301_127721191	3300032160	Peatlands Soil	MPKSDHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAV
Ga0316221_11022971	3300032665	Freshwater	MSECNHQATLLAIEKVLALLRSVKTLEGTDKDGVEHILQMAVDSLKN
Ga0335080_113553691	3300032828	Soil	VTASPSRNQTASALRAIEKALTLLRSVQTLEPTDKDSIEHLLEVAVQSLKGE
Ga0326728_1001558212	3300033402	Peat Soil	MSEWNQESIIRAIEKALALMHSVQTLEGTDKDGIEHLLEMAVENLKK
Ga0326728_100497821	3300033402	Peat Soil	MPKSDHKATLLAIEKVLALLRSVHTLEGTDKDGVEHLLEMAVRAKHWNGCGSL
Ga0326728_105876142	3300033402	Peat Soil	MPKSDHKAALAAIEKVLALLRSVQTLEGTDKDGVEHLLEIAIENLRN
Ga0371489_0203034_296_439	3300033755	Peat Soil	MPKSNHQAALLAIEKVLALLRSVQTLDGTDKDGVEHLLEVAVENLKK
Ga0334792_013655_272_421	3300033888	Soil	MPKIKSNHDTALHAIEKALALLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0334792_062465_121_270	3300033888	Soil	MPKPTCNHQAALEAIEKVLALLRSVQTLEGTDKDGVEHLLEMAAENLKK
Ga0334792_063672_489_632	3300033888	Soil	MPKSNRQSALLAIEKVLALLRSVKTLEGTDKDGVEHLLQMAVDNLKN
Ga0334792_171081_390_536	3300033888	Soil	MPKTKSNPQSALVAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLRE
Ga0370515_0001941_6712_6876	3300034163	Untreated Peat Soil	MPKTKSNPHAALVAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVKNLQATGTGK
Ga0370515_0016952_2919_3062	3300034163	Untreated Peat Soil	MPKSDRHSALLAIEKVLALLRSVKTLEGTDKDGVEHLLQLAVDNLKH
Ga0370515_0026165_2225_2368	3300034163	Untreated Peat Soil	MPKSDPKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVEKLKN
Ga0370515_0035217_1109_1258	3300034163	Untreated Peat Soil	MPKPKSNLQAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAAENLKK
Ga0370515_0040658_1280_1429	3300034163	Untreated Peat Soil	MPKTKSNHQAALLSIEKVLTLLRSVHTLDGTDKDGVEHLLEMAVENLKK
Ga0370515_0060729_1051_1200	3300034163	Untreated Peat Soil	MPKPKSNHQAALQSIEKALALLRSMHTLEGTDKDGVKHLLAMATENLKK
Ga0370515_0087382_321_470	3300034163	Untreated Peat Soil	MPKSKSNHQAALEAIEKVLALLRSVHTLEGTDKDGVEHLLEMAVENLKK
Ga0370515_0441601_1_144	3300034163	Untreated Peat Soil	MPKPKSNHQAALEAIEKVLALLRSVHTLEGTDKDGVEHLLEMAVENLK
Ga0370515_0524751_242_391	3300034163	Untreated Peat Soil	MPKSKSNQQAAIEAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKK
Ga0370514_000621_3864_4028	3300034199	Untreated Peat Soil	MPKSDHKPALLAIEKVLLLLRSVQTLEGTDKDGVEHLLEMAAESLRTDCVGSES
Ga0370514_001016_1253_1402	3300034199	Untreated Peat Soil	MPKPTCNHQASLEAIEKALALLRSMHTLEGTDKDGVEHLLEMAVENLKN
Ga0370514_001016_2424_2576	3300034199	Untreated Peat Soil	MPKLKPNPQSELEAIEKVLTLLRSVQTQEGTDKDGVEHLLEMAAESLRER
Ga0370514_045982_176_319	3300034199	Untreated Peat Soil	MPKSNHQAALVAIEKVLALLRSVQTLEGTDKDGVEHLLQMAVDNLKY
Ga0370514_051740_382_531	3300034199	Untreated Peat Soil	MPKTKSDRQAALLSIEKVLTLLRSVQTLEGTDKDGVEHLLEMAVESLKK
Ga0370514_052327_706_855	3300034199	Untreated Peat Soil	MPKPKFNPQAALVTIEKVLALLRSVQTLEGTDKDGVEHLLEMAVEDLKK
Ga0370514_064439_350_493	3300034199	Untreated Peat Soil	MPKPNHKAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAIKNLKN
Ga0370514_091884_308_451	3300034199	Untreated Peat Soil	MPKSDHKAALLAIEKVLALLRSVKTLEGTDKDGVEHLLEMAVENLKN
Ga0370514_119514_1_126	3300034199	Untreated Peat Soil	KAALLAIEKVLALLRSVQTLEGTDKDGVEHLLEMAVENLKN
Ga0370492_0007905_3903_4046	3300034282	Untreated Peat Soil	MPKSDHKSALLAIEKVLLLLRSIQTLEGTDKDGVEHLLEMAAENLRT
Ga0370492_0018841_570_719	3300034282	Untreated Peat Soil	MPKTKSNHQAALLFGEKVLTFLCSVQKPEGTDKDGVEHRLEMAVENLKK
Ga0370492_0020550_843_995	3300034282	Untreated Peat Soil	MPKPTSNHQAALEAIEKVLALLRSVHTLEGTDKDGVEHLLEMAVEKLRER
Ga0370492_0035190_870_1013	3300034282	Untreated Peat Soil	MPKSDHKPALLAIEKVLALLRSVHTLEGTDKDGVEHLLEMAVENLKD
Ga0370492_0178154_621_764	3300034282	Untreated Peat Soil	MPEPNQEAALHAIEKALALIHSVQTLEGTDKDGVEHLLGMAVENLKK
Ga0370492_0299296_451_594	3300034282	Untreated Peat Soil	MPTSDHQPALLAIEKVIALLRSLQVLEGTDKDGVEHLLEMAAENLKN
Ga0370492_0373461_341_499	3300034282	Untreated Peat Soil	MSKSDYQSAVLAIEKVLALLQSVQTLEGTDKDGAEHLLRMAVENIKTGQPES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065331

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences