NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F065305

Metagenome Family F065305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065305
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 51 residues
Representative Sequence MEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIHKEHAPKTCKFTIDAKAD
Number of Associated Samples 36
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.80 %
% of genes near scaffold ends (potentially truncated) 33.07 %
% of genes from short scaffolds (< 2000 bps) 62.20 %
Associated GOLD sequencing projects 35
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (40.945 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(78.740 % of family members)
Environment Ontology (ENVO) Unclassified
(94.488 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(100.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.54%    β-sheet: 21.15%    Coil/Unstructured: 42.31%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF14105DUF4278 24.41
PF02675AdoMet_dc 13.39
PF02511Thy1 4.72
PF00462Glutaredoxin 3.94
PF00124Photo_RC 3.15
PF03477ATP-cone 2.36
PF00268Ribonuc_red_sm 2.36
PF02867Ribonuc_red_lgC 1.57
PF16861Carbam_trans_C 1.57
PF14279HNH_5 1.57
PF04820Trp_halogenase 1.57
PF02562PhoH 0.79
PF09293RNaseH_C 0.79
PF01786AOX 0.79
PF16805Trans_coact 0.79
PF00011HSP20 0.79
PF02086MethyltransfD12 0.79
PF08534Redoxin 0.79
PF02672CP12 0.79
PF00210Ferritin 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG1586S-adenosylmethionine decarboxylaseAmino acid transport and metabolism [E] 13.39
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 4.72
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 2.36
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 1.57
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.79
COG0338DNA-adenine methylaseReplication, recombination and repair [L] 0.79
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.79
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.79
COG3392Adenine-specific DNA methylaseReplication, recombination and repair [L] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.06 %
UnclassifiedrootN/A40.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010293|Ga0116204_1008316All Organisms → Viruses → Predicted Viral4798Open in IMG/M
3300010293|Ga0116204_1196335Not Available657Open in IMG/M
3300013087|Ga0163212_1011370All Organisms → Viruses → Predicted Viral3374Open in IMG/M
3300013087|Ga0163212_1035156All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus1734Open in IMG/M
3300013087|Ga0163212_1045845All Organisms → Viruses1482Open in IMG/M
3300013087|Ga0163212_1086850All Organisms → Viruses → Predicted Viral1013Open in IMG/M
3300013087|Ga0163212_1241087Not Available562Open in IMG/M
(restricted) 3300013123|Ga0172368_10033316All Organisms → Viruses → Predicted Viral3804Open in IMG/M
(restricted) 3300013126|Ga0172367_10063448Not Available2814Open in IMG/M
(restricted) 3300013126|Ga0172367_10273290All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1012Open in IMG/M
(restricted) 3300013126|Ga0172367_10386104Not Available797Open in IMG/M
(restricted) 3300013126|Ga0172367_10711502Not Available528Open in IMG/M
(restricted) 3300013127|Ga0172365_10151559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1446Open in IMG/M
(restricted) 3300013128|Ga0172366_10206910All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1254Open in IMG/M
(restricted) 3300013128|Ga0172366_10695657Not Available596Open in IMG/M
(restricted) 3300013129|Ga0172364_10821589Not Available572Open in IMG/M
(restricted) 3300013130|Ga0172363_10056730All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales2838Open in IMG/M
(restricted) 3300013131|Ga0172373_10051623All Organisms → Viruses → Predicted Viral3538Open in IMG/M
(restricted) 3300013131|Ga0172373_10382971All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales881Open in IMG/M
(restricted) 3300013131|Ga0172373_10470667Not Available770Open in IMG/M
(restricted) 3300013132|Ga0172372_10035063All Organisms → Viruses5235Open in IMG/M
(restricted) 3300013136|Ga0172370_10714315All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes501Open in IMG/M
3300017788|Ga0169931_10356956All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1108Open in IMG/M
3300017788|Ga0169931_10697677Not Available669Open in IMG/M
3300020074|Ga0194113_10000169All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae77194Open in IMG/M
3300020074|Ga0194113_10000433All Organisms → Viruses54284Open in IMG/M
3300020074|Ga0194113_10003019All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae22680Open in IMG/M
3300020074|Ga0194113_10009096Not Available12058Open in IMG/M
3300020074|Ga0194113_10013140All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales9642Open in IMG/M
3300020074|Ga0194113_10022527All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM26863Open in IMG/M
3300020074|Ga0194113_10024533All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6509Open in IMG/M
3300020074|Ga0194113_10026048All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6253Open in IMG/M
3300020074|Ga0194113_10042134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales4554Open in IMG/M
3300020074|Ga0194113_10055846Not Available3770Open in IMG/M
3300020074|Ga0194113_10084168All Organisms → Viruses → Predicted Viral2861Open in IMG/M
3300020074|Ga0194113_10104037Not Available2477Open in IMG/M
3300020074|Ga0194113_10134119All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM012088Open in IMG/M
3300020074|Ga0194113_10174842All Organisms → Viruses → Predicted Viral1750Open in IMG/M
3300020074|Ga0194113_10217257All Organisms → Viruses → Predicted Viral1513Open in IMG/M
3300020074|Ga0194113_10290079All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1247Open in IMG/M
3300020074|Ga0194113_10320533All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1167Open in IMG/M
3300020074|Ga0194113_10403728Not Available1003Open in IMG/M
3300020074|Ga0194113_10445829Not Available940Open in IMG/M
3300020074|Ga0194113_10483850All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01892Open in IMG/M
3300020074|Ga0194113_10552013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes819Open in IMG/M
3300020074|Ga0194113_10563703Not Available808Open in IMG/M
3300020074|Ga0194113_10578132Not Available795Open in IMG/M
3300020074|Ga0194113_10741840All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes677Open in IMG/M
3300020074|Ga0194113_10786402Not Available652Open in IMG/M
3300020074|Ga0194113_10786403Not Available652Open in IMG/M
3300020074|Ga0194113_10799724All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01645Open in IMG/M
3300020074|Ga0194113_10827478Not Available631Open in IMG/M
3300020083|Ga0194111_10000418All Organisms → Viruses52397Open in IMG/M
3300020083|Ga0194111_10004941All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM215409Open in IMG/M
3300020083|Ga0194111_10051120All Organisms → Viruses → Predicted Viral3644Open in IMG/M
3300020083|Ga0194111_10108154All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2 → Synechococcus phage S-PM22214Open in IMG/M
3300020083|Ga0194111_10108436All Organisms → Viruses → Predicted Viral2210Open in IMG/M
3300020083|Ga0194111_10236077All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1304Open in IMG/M
3300020083|Ga0194111_10286466All Organisms → Viruses → Predicted Viral1141Open in IMG/M
3300020083|Ga0194111_10447816Not Available842Open in IMG/M
3300020083|Ga0194111_10872111Not Available536Open in IMG/M
3300020084|Ga0194110_10214552Not Available1437Open in IMG/M
3300020084|Ga0194110_10283029All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011183Open in IMG/M
3300020084|Ga0194110_10328306All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1066Open in IMG/M
3300020109|Ga0194112_10098206All Organisms → Viruses → Predicted Viral2637Open in IMG/M
3300020109|Ga0194112_10204397All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1595Open in IMG/M
3300020109|Ga0194112_10447178All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae920Open in IMG/M
3300020179|Ga0194134_10051781All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2258Open in IMG/M
3300020179|Ga0194134_10054514All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2 → Synechococcus phage S-PM22179Open in IMG/M
3300020179|Ga0194134_10092883All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1500Open in IMG/M
3300020183|Ga0194115_10001838All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae26246Open in IMG/M
3300020183|Ga0194115_10016693All Organisms → Viruses6058Open in IMG/M
3300020183|Ga0194115_10025745All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae4358Open in IMG/M
3300020183|Ga0194115_10040055All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales3128Open in IMG/M
3300020183|Ga0194115_10055480All Organisms → Viruses → Predicted Viral2465Open in IMG/M
3300020183|Ga0194115_10175989All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1083Open in IMG/M
3300020183|Ga0194115_10178473All Organisms → Viruses → Predicted Viral1072Open in IMG/M
3300020183|Ga0194115_10205625All Organisms → Viruses967Open in IMG/M
3300020183|Ga0194115_10270756Not Available791Open in IMG/M
3300020183|Ga0194115_10275951Not Available780Open in IMG/M
3300020183|Ga0194115_10283349Not Available765Open in IMG/M
3300020183|Ga0194115_10345930Not Available659Open in IMG/M
3300020183|Ga0194115_10415662Not Available573Open in IMG/M
3300020183|Ga0194115_10446719Not Available542Open in IMG/M
3300020190|Ga0194118_10000644All Organisms → Viruses56641Open in IMG/M
3300020190|Ga0194118_10361299Not Available750Open in IMG/M
3300020193|Ga0194131_10085444All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011796Open in IMG/M
3300020196|Ga0194124_10224777All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus950Open in IMG/M
3300020197|Ga0194128_10000919All Organisms → Viruses52304Open in IMG/M
3300020197|Ga0194128_10013191All Organisms → Viruses9163Open in IMG/M
3300020197|Ga0194128_10276073Not Available851Open in IMG/M
3300020197|Ga0194128_10540387Not Available528Open in IMG/M
3300020200|Ga0194121_10110704All Organisms → Viruses → Predicted Viral1719Open in IMG/M
3300020204|Ga0194116_10098816All Organisms → Viruses → Predicted Viral1870Open in IMG/M
3300020214|Ga0194132_10377178Not Available729Open in IMG/M
3300020214|Ga0194132_10435774All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes660Open in IMG/M
3300020220|Ga0194119_10046679All Organisms → Viruses4028Open in IMG/M
3300020220|Ga0194119_10635376Not Available652Open in IMG/M
3300020221|Ga0194127_10069561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Cymopoleiavirus → unclassified Cymopoleiavirus → Synechococcus phage S-RSM42710Open in IMG/M
3300020221|Ga0194127_10453675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria837Open in IMG/M
3300020222|Ga0194125_10543994Not Available702Open in IMG/M
3300020578|Ga0194129_10021448All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5920Open in IMG/M
3300020578|Ga0194129_10069582Not Available2538Open in IMG/M
3300021091|Ga0194133_10173272All Organisms → Viruses → Predicted Viral1491Open in IMG/M
3300021091|Ga0194133_10405717Not Available754Open in IMG/M
3300021092|Ga0194122_10023398All Organisms → Viruses → Predicted Viral4285Open in IMG/M
3300021092|Ga0194122_10519599All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes592Open in IMG/M
3300021093|Ga0194123_10324320Not Available727Open in IMG/M
3300021376|Ga0194130_10002174All Organisms → Viruses28952Open in IMG/M
3300021376|Ga0194130_10002715Not Available25087Open in IMG/M
3300021376|Ga0194130_10002733All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes24955Open in IMG/M
3300021376|Ga0194130_10346895All Organisms → Viruses806Open in IMG/M
3300021376|Ga0194130_10420084Not Available704Open in IMG/M
3300021376|Ga0194130_10422644All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes701Open in IMG/M
3300021376|Ga0194130_10445659Not Available675Open in IMG/M
3300021376|Ga0194130_10462175Not Available658Open in IMG/M
3300021376|Ga0194130_10493835Not Available628Open in IMG/M
3300021376|Ga0194130_10523900Not Available602Open in IMG/M
3300021424|Ga0194117_10129774Not Available1307Open in IMG/M
3300021424|Ga0194117_10230429Not Available900Open in IMG/M
3300021424|Ga0194117_10338466Not Available701Open in IMG/M
3300025283|Ga0208048_1089133Not Available664Open in IMG/M
3300025283|Ga0208048_1114882Not Available555Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake78.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater15.75%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.94%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water1.57%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300010293Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaGEnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013123 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11mEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013128 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cmEnvironmentalOpen in IMG/M
3300013129 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013136 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5mEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020214Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80mEnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020578Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35mEnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021092Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10mEnvironmentalOpen in IMG/M
3300021093Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surfaceEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300025283Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0116204_100831693300010293Anoxic Lake WaterMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFVDAKAD*
Ga0116204_119633513300010293Anoxic Lake WaterTEVSRLGTDRSSMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD*
Ga0163212_101137013300013087FreshwaterMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFTIDAKAD*
Ga0163212_103515663300013087FreshwaterMEIILWSCVEAQKLINNVRTSKVPDEVKAELIQIHKEHAPKTCKFTIDAKAD*
Ga0163212_104584513300013087FreshwaterMEIILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD*
Ga0163212_108685033300013087FreshwaterMEIILWSCIEAQKLINNVRTSKVPDELKAELIQIHKEHSPKTCKFIDAKAD*
Ga0163212_124108723300013087FreshwaterMEIILWTCVEAQKLINNVLTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD*
(restricted) Ga0172368_1003331683300013123FreshwaterMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD*
(restricted) Ga0172367_1006344843300013126FreshwaterMEIILWTCVEAQKLVNNVSTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD*
(restricted) Ga0172367_1027329023300013126FreshwaterMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD*
(restricted) Ga0172367_1038610433300013126FreshwaterMEIILWSCVEAQKLINNALISKSVSDQVKAELVEIYKEHAPKTCKFIDAKAD*
(restricted) Ga0172367_1071150213300013126FreshwaterEVSRLGTDRSSMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD*
(restricted) Ga0172365_1015155923300013127SedimentMEIILWTCVEAQKLINNALISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD*
(restricted) Ga0172366_1020691033300013128SedimentMEIILWTCVEAQKLITNVIKSKVPDEVKVELIQIHKEHAPKTCKFIDAKAD*
(restricted) Ga0172366_1069565723300013128SedimentMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD*
(restricted) Ga0172364_1082158913300013129SedimentIILWTCVEAQKLINNVRTSKVPNEIKAEIIQIHKEHAPKTCKFTIDAKAD*
(restricted) Ga0172363_1005673033300013130SedimentMEIILWTCVEAQKLINNVRTSKVPNEIKAEIIQIHKEHAPKTCKFTIDAKAD*
(restricted) Ga0172373_1005162353300013131FreshwaterMEIILWTCVEAQKLINNARISTSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD*
(restricted) Ga0172373_1038297133300013131FreshwaterMEIILWSCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD*
(restricted) Ga0172373_1047066713300013131FreshwaterRLGTDRSSMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
(restricted) Ga0172372_10035063113300013132FreshwaterMEIILWTCLEAQKLINNVRTSKIPDEVKTELIQIHKEHSPKTCKFIDAKAD*
(restricted) Ga0172370_1071431523300013136FreshwaterMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD*
(restricted) Ga0172376_1066399523300014720FreshwaterMEIILWSCVEAQKLINNARISKSVSDQVKAELVEIYKEH
Ga0169931_1035695643300017788FreshwaterMEIILWTCVEAQKLINNARISTSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD
Ga0169931_1069767713300017788FreshwaterEVSRLGTDRSSMEIILWTCVEAQKLINNVRTSKVPNEIKAEIIQIHKEHAPKTCKFTIDAKAD
Ga0194113_10000169683300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194113_10000433873300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194113_10003019223300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194113_10009096113300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKMPNNIKAELIQIHIEHSPKTCKFTIDAKAD
Ga0194113_1001314023300020074Freshwater LakeMEIILWTCVESQKLIDNVRTSKVPNKVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1002207813300020074Freshwater LakeMEIILWTCVEAQKLINNALISKSVSDQVKAELVEIYK
Ga0194113_1002252713300020074Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1002453323300020074Freshwater LakeMEIILWTCVESQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD
Ga0194113_10026048223300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKVELIQIHKEHAPKTCKFIDAKVD
Ga0194113_10042134123300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIHKEHSPKTCKFTIDAKAD
Ga0194113_1005584673300020074Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD
Ga0194113_1008416813300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194113_10104037103300020074Freshwater LakeMEIILWSCVEAQKLINNVTKSKVPNEIKAELIQIHKEHSPKTCKFTIDAKAD
Ga0194113_1013411943300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIHKEHSPKTCKFTIDAKAD
Ga0194113_1017484243300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1021725713300020074Freshwater LakeIILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1029007913300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194113_1032053313300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKVELIQIHKEHAPKTCKFIDAKAD
Ga0194113_1040372813300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTC
Ga0194113_1044582943300020074Freshwater LakeMEIILWSCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD
Ga0194113_1048385053300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1055201313300020074Freshwater LakeMEIILWTCIEAQKLINNVIKSKVPDEVKVELIQIHKEHAPKTCKFIDAKAD
Ga0194113_1056370313300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194113_1057813223300020074Freshwater LakeMEIILWSCVEAQKLINNARISKSVSDQVKVELVEIYKEHAPKTCKFIDAKVD
Ga0194113_1074184023300020074Freshwater LakeMEIILWTCIEAQKLITNVIKSKVPDEVKVELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1078640223300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194113_1078640323300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKTELIQIHKEHAPKTCKFIDAKAD
Ga0194113_1079972423300020074Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194113_1082747813300020074Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194111_10000418893300020083Freshwater LakeTEVSRLGTDRSSMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194111_1000494153300020083Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKVD
Ga0194111_10051120113300020083Freshwater LakeSCVEAQKLINNVRISKVPNNVKEELVQIYIEHSPKTCTFMKSYMYDFTIDAKAD
Ga0194111_1010815413300020083Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFTIDA
Ga0194111_1010843683300020083Freshwater LakeSMEIILWFCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194111_1023607713300020083Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194111_1028646643300020083Freshwater LakeMEIILWTCVEAQKLINNVHTSKVPNEIKAELIQIHKEHSPKTCK
Ga0194111_1035613533300020083Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYK
Ga0194111_1044781643300020083Freshwater LakeDRSSMEIILWSCVEAQKLINNVTKSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194111_1087211133300020083Freshwater LakeILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194110_1021455243300020084Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIHKEHSPKTCKFIDAKAD
Ga0194110_1028302953300020084Freshwater LakeMEIILWTCVEAQKLINNVRASKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194110_1032830643300020084Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194112_1009820693300020109Freshwater LakeDRSSMEIILWTCIEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194112_1020439743300020109Freshwater LakeMEIILWTCVEAQKLITNVIKSKVPDEVKVELIQIHKEHAPKTCKFIDAKAD
Ga0194112_1044717833300020109Freshwater LakeMEIILWTCVEAQKLINNVRASKVPNEIKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194134_1005178113300020179Freshwater LakeEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194134_1005451463300020179Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKA
Ga0194134_1009288333300020179Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEVKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194115_10001838223300020183Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194115_10016693113300020183Freshwater LakeMVIILWTCVEAQKLINNVRTSKVPNEVKAELIQIYIEHSPKTCKFTIDAKAD
Ga0194115_1002574513300020183Freshwater LakeMEIILWTCVESQKLINNARISKSVSDQVKAELVEIYKEHTPKTCKFTIDAKAD
Ga0194115_1004005553300020183Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEMKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194115_1005548043300020183Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194115_1017598913300020183Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEIKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194115_1017847313300020183Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFTIDAKAD
Ga0194115_1020562533300020183Freshwater LakeMEIILWTCVEAQKLINNVRISKSVSDQIKVELVEIYKEHAPKTCKFIDAKAD
Ga0194115_1027075633300020183Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAK
Ga0194115_1027595143300020183Freshwater LakeIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194115_1028334933300020183Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPDEIKTELIQIHKEHAPKTCKFIDAKAD
Ga0194115_1034593013300020183Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCRFIDAKAD
Ga0194115_1041566233300020183Freshwater LakeDRSSMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194115_1044671933300020183Freshwater LakeYATEVSRLGTDRSSMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194118_10000644793300020190Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEYAPKTCKFTIDAKVD
Ga0194118_1036129923300020190Freshwater LakeMEIILWSCIEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194131_1008544413300020193Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIHKEHSPKTCK
Ga0194124_1022477713300020196Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPDEVKAELIQIHKEHAPKTCKK
Ga0194128_1000091913300020197Freshwater LakeEVSRLGTDRSSMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFTIDAKAD
Ga0194128_10013191113300020197Freshwater LakeMEIILWTCVEAQKLINNVRTSKMPNDIKAELIQIHIEHSPKTCKFTIDAKAD
Ga0194128_1027607313300020197Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEYAPKTCKFTIDAKAD
Ga0194128_1054038723300020197Freshwater LakeMEIILWTCVEAQKLINNVRTSKAPNEIKAELIQIHKEHAPKNCKFIDAKAD
Ga0194121_1011070413300020200Freshwater LakeQTEVSRLGTDRSSMEIILWTCVEAQKLINNVRISKSVSDQIKVELVEIYKEHAPKTCKFIDAKAD
Ga0194116_1009881653300020204Freshwater LakeMEIILWSCIEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194116_1056487323300020204Freshwater LakeMEIILWTCVEAQKLINNALISKSVSDQVKAELVEIYKEH
Ga0194132_1037717843300020214Freshwater LakeMEIILWSCVEAQKLINNVTKSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0194132_1043577423300020214Freshwater LakeMEIILWSCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTC
Ga0194119_1004667943300020220Freshwater LakeMEIILWSCVEAQKLINNVRISKVPNNVKEELVQIYIEHSPKTCTFMKSYMYDFTIDAKAD
Ga0194119_1063537613300020220Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHSPKTCKFIDAKAD
Ga0194127_1006956113300020221Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPK
Ga0194127_1045367523300020221Freshwater LakeMVIILWTCVEAQKLINNVRTSKVPNEVKAELIQIYIEHSPKKSKFTIDAKAD
Ga0194125_1054399443300020222Freshwater LakeGTDRSSMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFIDAKAD
Ga0194129_10021448173300020578Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEVKAEIIQIHKEHAPKTCKFTIDAKAD
Ga0194129_1006958233300020578Freshwater LakeMEIILWTCVEAQKLINNVRISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKAD
Ga0194133_1017327233300021091Freshwater LakeMDIILWTCVEAQKLINNARISKSVSDQIKVELVEIYKEHAPKTCKFIDAKAD
Ga0194133_1040571713300021091Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCK
Ga0194122_1002339813300021092Freshwater LakeLWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFIDAKAD
Ga0194122_1051959923300021092Freshwater LakeMEIILWTCVEAQKLINNARISKSVSDQVKAELVEIYKEHAPKTCKFTIDAKADXRN
Ga0194123_1032432013300021093Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFIDAKAD
Ga0194130_10002174303300021376Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEIKTELIQIHKEHSPKTCKFIDAKAD
Ga0194130_10002715383300021376Freshwater LakeMEIILWTCIEAQKLINNVRTSKVPDEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194130_10002733183300021376Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFIDAKAD
Ga0194130_1034689513300021376Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPDEVKAELIQIYKEHAPKTCKFTIDA
Ga0194130_1042008443300021376Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194130_1042264413300021376Freshwater LakeMEIILWTCVEAQKLITNVIKSKVPDEVKVELIQIHKEHAPKTCKFTIDAKAD
Ga0194130_1044565943300021376Freshwater LakeILWTCVEAQKLINNVRTSKVPNEVKAELIQIHKEHAPKTCKFIDAKAD
Ga0194130_1046217513300021376Freshwater LakeMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKA
Ga0194130_1049383523300021376Freshwater LakeMEIILWTCVESQKLINNARISKSVSDQVKAELVEIYKEHAPKTCK
Ga0194130_1052390013300021376Freshwater LakeDRSSMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFIDAKAD
Ga0194117_1012977463300021424Freshwater LakeDRSSMEIILWSCVEAQKLINNVTKSKVPNEIKAELIQIHKEHSPKTCKFTIDAKAD
Ga0194117_1023042953300021424Freshwater LakeGTDRSSMEIILWTCVEAQKLINNAVTNKSVSDQVKVELVEIYKEHAPKTCKFSIDAKAD
Ga0194117_1033846623300021424Freshwater LakeMEIILWSCVEAQKLINNVRTSKVPNEIKAELIQIHKEHAPKTCKFTIDAKAD
Ga0208048_108913333300025283FreshwaterLGTDRSSMEIILWTCVEAQKLINNVRTSKVPNEIKAELIQIHKEHSPKTCKFTIDAKAD
Ga0208048_111488223300025283FreshwaterMEIILWTCVEAQKLINNVLTSKVPNEVKAELIQIHKEHAPKTCKFTIDAKAD


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