Metagenome Family F065304

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065304
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	42 residues
Representative Sequence	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Number of Associated Samples	73
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.291 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.630 % of family members)
Environment Ontology (ENVO)	Unclassified (86.614 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (60.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.95% β-sheet: 0.00% Coil/Unstructured: 86.05%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00113	Enolase_C	6.30
PF02548	Pantoate_transf	3.94
PF14367	DUF4411	3.94
PF13481	AAA_25	1.57
PF03401	TctC	0.79
PF09339	HTH_IclR	0.79
PF12787	EcsC	0.79
PF13362	Toprim_3	0.79
PF02463	SMC_N	0.79
PF01300	Sua5_yciO_yrdC	0.79
PF03480	DctP	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0148	Enolase	Carbohydrate transport and metabolism [G]	6.30
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	3.94
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
All Organisms	root	All Organisms	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
cellular organisms	root	All Organisms → cellular organisms	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.45 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.36 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %
Tepidamorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	0.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.79 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %
Tepidamorphus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus	0.79 %
Thalassobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %
Tepidamorphus gemmatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	0.79 %
Thalassobaculum litoreum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum	0.79 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.79 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %
Thalassobaculum litoreum DSM 18839	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	0.79 %
Mesorhizobium sp. ORS 3359	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3359	0.79 %
Tepidamorphus gemmatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	0.79 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108229739	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005764\|Ga0066903_100690582	Not Available	1796	Open in IMG/M
3300005764\|Ga0066903_100948820	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300005764\|Ga0066903_103666923	Not Available	826	Open in IMG/M
3300005764\|Ga0066903_104277718	Not Available	763	Open in IMG/M
3300005764\|Ga0066903_106941035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	588	Open in IMG/M
3300005764\|Ga0066903_107509002	Not Available	562	Open in IMG/M
3300005764\|Ga0066903_107557861	Not Available	560	Open in IMG/M
3300005764\|Ga0066903_107674103	Not Available	555	Open in IMG/M
3300005764\|Ga0066903_109114878	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_12282166	Not Available	535	Open in IMG/M
3300010366\|Ga0126379_11309608	Not Available	831	Open in IMG/M
3300010376\|Ga0126381_100164906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2926	Open in IMG/M
3300010398\|Ga0126383_12528377	Not Available	598	Open in IMG/M
3300010398\|Ga0126383_13520718	Not Available	511	Open in IMG/M
3300010863\|Ga0124850_1139696	Not Available	574	Open in IMG/M
3300016270\|Ga0182036_10748306	Not Available	793	Open in IMG/M
3300016319\|Ga0182033_10522864	Not Available	1022	Open in IMG/M
3300016319\|Ga0182033_10835442	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300016341\|Ga0182035_11956176	Not Available	532	Open in IMG/M
3300016341\|Ga0182035_12038443	Not Available	521	Open in IMG/M
3300016357\|Ga0182032_10987550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	719	Open in IMG/M
3300016357\|Ga0182032_11722543	Not Available	547	Open in IMG/M
3300016422\|Ga0182039_10050419	Not Available	2830	Open in IMG/M
3300016422\|Ga0182039_10067342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2516	Open in IMG/M
3300016422\|Ga0182039_10422233	Not Available	1136	Open in IMG/M
3300016422\|Ga0182039_11220521	Not Available	680	Open in IMG/M
3300016422\|Ga0182039_11251345	Not Available	671	Open in IMG/M
3300016422\|Ga0182039_11622353	Not Available	591	Open in IMG/M
3300016445\|Ga0182038_10013245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4735	Open in IMG/M
3300016445\|Ga0182038_11165969	Not Available	686	Open in IMG/M
3300021560\|Ga0126371_11413465	Not Available	826	Open in IMG/M
3300031543\|Ga0318516_10525131	Not Available	678	Open in IMG/M
3300031544\|Ga0318534_10217083	Not Available	1103	Open in IMG/M
3300031544\|Ga0318534_10696471	Not Available	574	Open in IMG/M
3300031544\|Ga0318534_10729590	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031544\|Ga0318534_10753366	Not Available	548	Open in IMG/M
3300031545\|Ga0318541_10160093	Not Available	1238	Open in IMG/M
3300031545\|Ga0318541_10372648	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031545\|Ga0318541_10520782	Not Available	665	Open in IMG/M
3300031546\|Ga0318538_10173020	Not Available	1147	Open in IMG/M
3300031546\|Ga0318538_10257573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	937	Open in IMG/M
3300031561\|Ga0318528_10048640	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300031561\|Ga0318528_10112803	Not Available	1433	Open in IMG/M
3300031561\|Ga0318528_10259468	Not Available	932	Open in IMG/M
3300031561\|Ga0318528_10344165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	800	Open in IMG/M
3300031573\|Ga0310915_10810522	Not Available	658	Open in IMG/M
3300031640\|Ga0318555_10282575	Not Available	897	Open in IMG/M
3300031640\|Ga0318555_10595916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3359	599	Open in IMG/M
3300031668\|Ga0318542_10125001	Not Available	1261	Open in IMG/M
3300031668\|Ga0318542_10721536	Not Available	521	Open in IMG/M
3300031679\|Ga0318561_10218626	Not Available	1035	Open in IMG/M
3300031679\|Ga0318561_10732064	Not Available	544	Open in IMG/M
3300031680\|Ga0318574_10589949	Not Available	651	Open in IMG/M
3300031682\|Ga0318560_10520668	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031713\|Ga0318496_10322891	Not Available	852	Open in IMG/M
3300031713\|Ga0318496_10794850	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031719\|Ga0306917_10270898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300031719\|Ga0306917_10574539	Not Available	886	Open in IMG/M
3300031719\|Ga0306917_11277159	Not Available	568	Open in IMG/M
3300031723\|Ga0318493_10736329	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031724\|Ga0318500_10221331	Not Available	911	Open in IMG/M
3300031724\|Ga0318500_10305020	Not Available	780	Open in IMG/M
3300031744\|Ga0306918_10036125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3172	Open in IMG/M
3300031748\|Ga0318492_10221270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	973	Open in IMG/M
3300031763\|Ga0318537_10182071	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031764\|Ga0318535_10119530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1163	Open in IMG/M
3300031764\|Ga0318535_10258994	Not Available	779	Open in IMG/M
3300031764\|Ga0318535_10497955	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031768\|Ga0318509_10313163	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300031770\|Ga0318521_10057784	Not Available	2026	Open in IMG/M
3300031771\|Ga0318546_10614492	Not Available	764	Open in IMG/M
3300031771\|Ga0318546_10732973	Not Available	695	Open in IMG/M
3300031771\|Ga0318546_11245752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300031777\|Ga0318543_10048097	Not Available	1731	Open in IMG/M
3300031777\|Ga0318543_10451023	Not Available	576	Open in IMG/M
3300031779\|Ga0318566_10674261	Not Available	501	Open in IMG/M
3300031781\|Ga0318547_10041127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2442	Open in IMG/M
3300031792\|Ga0318529_10141462	Not Available	1103	Open in IMG/M
3300031793\|Ga0318548_10064285	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300031795\|Ga0318557_10127531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1141	Open in IMG/M
3300031805\|Ga0318497_10102364	Not Available	1537	Open in IMG/M
3300031805\|Ga0318497_10397682	Not Available	770	Open in IMG/M
3300031805\|Ga0318497_10541722	Not Available	652	Open in IMG/M
3300031821\|Ga0318567_10298367	Not Available	908	Open in IMG/M
3300031821\|Ga0318567_10490439	Not Available	697	Open in IMG/M
3300031831\|Ga0318564_10542743	Not Available	503	Open in IMG/M
3300031832\|Ga0318499_10112026	Not Available	1058	Open in IMG/M
3300031845\|Ga0318511_10328043	Not Available	694	Open in IMG/M
3300031846\|Ga0318512_10225529	Not Available	921	Open in IMG/M
3300031879\|Ga0306919_10661555	Not Available	805	Open in IMG/M
3300031890\|Ga0306925_10476512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1331	Open in IMG/M
3300031890\|Ga0306925_11051174	Not Available	826	Open in IMG/M
3300031890\|Ga0306925_12171361	Not Available	517	Open in IMG/M
3300031896\|Ga0318551_10282322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300031897\|Ga0318520_10192733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300031910\|Ga0306923_10540297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1314	Open in IMG/M
3300031910\|Ga0306923_12144447	Not Available	562	Open in IMG/M
3300031912\|Ga0306921_10152844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2701	Open in IMG/M
3300031912\|Ga0306921_10641954	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300031912\|Ga0306921_10689619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300031912\|Ga0306921_10733020	Not Available	1133	Open in IMG/M
3300031912\|Ga0306921_10772543	Not Available	1099	Open in IMG/M
3300031941\|Ga0310912_10827658	Not Available	714	Open in IMG/M
3300031942\|Ga0310916_10691203	Not Available	863	Open in IMG/M
3300031945\|Ga0310913_10098927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1970	Open in IMG/M
3300031945\|Ga0310913_10714282	Not Available	708	Open in IMG/M
3300031947\|Ga0310909_11279732	Not Available	590	Open in IMG/M
3300031947\|Ga0310909_11474964	Not Available	542	Open in IMG/M
3300032001\|Ga0306922_11315106	Not Available	730	Open in IMG/M
3300032035\|Ga0310911_10788177	Not Available	549	Open in IMG/M
3300032039\|Ga0318559_10474739	Not Available	583	Open in IMG/M
3300032039\|Ga0318559_10529860	Not Available	549	Open in IMG/M
3300032043\|Ga0318556_10154924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1183	Open in IMG/M
3300032044\|Ga0318558_10151476	Not Available	1116	Open in IMG/M
3300032051\|Ga0318532_10218173	Not Available	677	Open in IMG/M
3300032052\|Ga0318506_10516106	Not Available	529	Open in IMG/M
3300032054\|Ga0318570_10332124	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300032066\|Ga0318514_10286914	Not Available	869	Open in IMG/M
3300032066\|Ga0318514_10534026	Not Available	624	Open in IMG/M
3300032076\|Ga0306924_11194635	Not Available	823	Open in IMG/M
3300032091\|Ga0318577_10037231	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300032094\|Ga0318540_10371928	Not Available	690	Open in IMG/M
3300032094\|Ga0318540_10599960	Not Available	530	Open in IMG/M
3300032261\|Ga0306920_101772031	Not Available	872	Open in IMG/M
3300033289\|Ga0310914_10600551	Not Available	992	Open in IMG/M
3300033290\|Ga0318519_10709070	Not Available	615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.34%
Loam	Environmental → Terrestrial → Soil → Loam	8.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	86.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1082297391	3300005332	Tropical Forest Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0066903_1006905825	3300005764	Tropical Forest Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRS
Ga0066903_1009488203	3300005764	Tropical Forest Soil	MALNAKTNPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLA
Ga0066903_1036669231	3300005764	Tropical Forest Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLA
Ga0066903_1042777182	3300005764	Tropical Forest Soil	MSLNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0066903_1069410351	3300005764	Tropical Forest Soil	MALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLALA
Ga0066903_1075090021	3300005764	Tropical Forest Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0066903_1075578611	3300005764	Tropical Forest Soil	MALSAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLA
Ga0066903_1076741032	3300005764	Tropical Forest Soil	MALNAKANANYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLALA
Ga0066903_1091148782	3300005764	Tropical Forest Soil	MALNAKTDPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDF
Ga0126370_122821661	3300010358	Tropical Forest Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0126379_113096082	3300010366	Tropical Forest Soil	MALNAKSDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0126381_1001649064	3300010376	Tropical Forest Soil	MALNAKTDPNYVPKRINGKFAPGYSGNPGGSLEATRRSFN
Ga0126383_125283772	3300010398	Tropical Forest Soil	MALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATRRSFNKDFLLAL
Ga0126383_135207181	3300010398	Tropical Forest Soil	MALNAKTDPNYVPQRINGKFAPGSSGNPGGSLEATRRSFNKDFLLAL
Ga0124850_11396961	3300010863	Tropical Forest Soil	MALNAKANPNYVPKRINGKFAPGYSGNPGGSLEATR
Ga0182036_107483061	3300016270	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0182033_105228642	3300016319	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0182033_108354421	3300016319	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALAA
Ga0182035_119561763	3300016341	Soil	MALNAKIDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0182035_120384432	3300016341	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAADF
Ga0182032_109875503	3300016357	Soil	MALNAKTDPNYVPKRINGKFAPGWLGNPGGSLEATRRSFNKDFLL
Ga0182032_117225431	3300016357	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0182039_100504197	3300016422	Soil	MALNAKTDPNYLPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0182039_100673426	3300016422	Soil	MALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFNRDFLLALAA
Ga0182039_104222331	3300016422	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0182039_112205212	3300016422	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0182039_112513451	3300016422	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0182039_116223532	3300016422	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAAD
Ga0182038_100132451	3300016445	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0182038_111659691	3300016445	Soil	MALNAKANPNYVAKRINGKFAPGYSGNPGGSLEATRRSFNKDF
Ga0126371_114134652	3300021560	Tropical Forest Soil	MALNAKTAPNYIPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318516_105251311	3300031543	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318534_102170833	3300031544	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318534_106964712	3300031544	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318534_107295902	3300031544	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLAVPWRLRVGRS
Ga0318534_107533661	3300031544	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSF
Ga0318541_101600934	3300031545	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRR
Ga0318541_103726482	3300031545	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318541_105207821	3300031545	Soil	MALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRRSF
Ga0318538_101730201	3300031546	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318538_102575731	3300031546	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318528_100486401	3300031561	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318528_101128032	3300031561	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318528_102594682	3300031561	Soil	MALNAKTDPNYVPERINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318528_103441651	3300031561	Soil	MALNAKTDPNYVPKRIRGKFAAGWSGHPGGSLEATRR
Ga0310915_108105222	3300031573	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318555_102825752	3300031640	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0318555_105959162	3300031640	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATR
Ga0318542_101250013	3300031668	Soil	MALNAKTDPTYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318542_107215361	3300031668	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318561_102186262	3300031679	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0318561_107320641	3300031679	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0318574_105899491	3300031680	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318560_105206681	3300031682	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEAT
Ga0318496_103228911	3300031713	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318496_107948501	3300031713	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSFNK
Ga0306917_102708983	3300031719	Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSCNRDYM
Ga0306917_105745391	3300031719	Soil	MALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0306917_112771591	3300031719	Soil	MALNAKTDPNYLPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0318493_107363291	3300031723	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRR
Ga0318500_102213312	3300031724	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATR
Ga0318500_103050203	3300031724	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0306918_100361251	3300031744	Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318492_102212701	3300031748	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLAVPWR
Ga0318537_101820712	3300031763	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318535_101195301	3300031764	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318535_102589942	3300031764	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFL
Ga0318535_104979551	3300031764	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSF
Ga0318509_103131631	3300031768	Soil	MALNAKTDPDYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318521_100577841	3300031770	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALA
Ga0318546_106144921	3300031771	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318546_107329731	3300031771	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNR
Ga0318546_112457521	3300031771	Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLAL
Ga0318543_100480971	3300031777	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318543_104510231	3300031777	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0318566_106742611	3300031779	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0318547_100411275	3300031781	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318529_101414621	3300031792	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRS
Ga0318548_100642852	3300031793	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLA
Ga0318557_101275311	3300031795	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318497_101023643	3300031805	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318497_103976821	3300031805	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSF
Ga0318497_105417222	3300031805	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318567_102983671	3300031821	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPDGSLEAT
Ga0318567_104904391	3300031821	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLL
Ga0318564_105427432	3300031831	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLALAAD
Ga0318499_101120261	3300031832	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0318511_103280432	3300031845	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAAD
Ga0318512_102255291	3300031846	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRSFNKD
Ga0306919_106615551	3300031879	Soil	MALNAKTNPNYVAKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0306925_104765121	3300031890	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0306925_110511741	3300031890	Soil	MALNAKTNPNYVAKRINGKFAPGWSGNPGGSLEATR
Ga0306925_121713611	3300031890	Soil	MSLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0318551_102823223	3300031896	Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRR
Ga0318520_101927332	3300031897	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0306923_105402971	3300031910	Soil	MALNAKTNPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLAL
Ga0306923_121444471	3300031910	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0306921_101528445	3300031912	Soil	MALNAKTDPTYSPKRIKFAPGWSGNPGGSLEATRRSFNKDFLLALA
Ga0306921_106419541	3300031912	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNRDFLLAL
Ga0306921_106896193	3300031912	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0306921_107330201	3300031912	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFN
Ga0306921_107725433	3300031912	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLA
Ga0310912_108276581	3300031941	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0310916_106912031	3300031942	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAADF
Ga0310913_100989274	3300031945	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0310913_107142822	3300031945	Soil	MALNAKANPNYVPKRINGKFAPGWSGNPGGSLEAMRRSFNK
Ga0310909_112797322	3300031947	Soil	MSLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNK
Ga0310909_114749641	3300031947	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0306922_113151061	3300032001	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLL
Ga0310911_107881771	3300032035	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEAT
Ga0318559_104747391	3300032039	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKGF
Ga0318559_105298601	3300032039	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNRDF
Ga0318556_101549241	3300032043	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALA
Ga0318558_101514761	3300032044	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318532_102181733	3300032051	Soil	MALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFN
Ga0318506_105161061	3300032052	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFL
Ga0318570_103321241	3300032054	Soil	MALNAKTDPNYVPKRINGRFAPGWSGNPGGSLEATRRS
Ga0318514_102869141	3300032066	Soil	MALNAKTDPNYVPNRINGKFAPGWSGNPGGSLEATRRSFN
Ga0318514_105340261	3300032066	Soil	MTLNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKD
Ga0306924_111946351	3300032076	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDF
Ga0318577_100372311	3300032091	Soil	MALNAKTDPNYVPKRINGKFAPGWSGNPGGSLEATRRSFYR
Ga0318540_103719283	3300032094	Soil	MALNAKTDPNYVPKRISGKFAPGYSGNPGGSLEATRRSFNR
Ga0318540_105999602	3300032094	Soil	MALNAKANPNYVAKRINGKFAPGWSGNPGGSLEATRR
Ga0306920_1017720313	3300032261	Soil	MALNAKTAPNYVPKRINGKFAPGWSGNPGGSLEATRRSFNKDFLLALAA
Ga0310914_106005512	3300033289	Soil	MALNTKTDPNYVPKRINGKFAPGWSGNPGGSLEATR
Ga0318519_107090702	3300033290	Soil	MALNAKTDPTYSPKRINGKFAPGWSGNPGGSLEATRRSFNKDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065304

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences