Metagenome / Metatranscriptome Family F065252

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	48 residues
Representative Sequence	PVLVQVSLMHRGGIGTSAPAAHSAAVVRGLTGYVDLFVTQIRDANK
Number of Associated Samples	107
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	95.31 %
% of genes from short scaffolds (< 2000 bps)	95.31 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.312 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (9.375 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.35% β-sheet: 0.00% Coil/Unstructured: 48.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF07519	Tannase	7.81
PF01612	DNA_pol_A_exo1	3.91
PF14532	Sigma54_activ_2	3.91
PF00355	Rieske	2.34
PF00069	Pkinase	1.56
PF07690	MFS_1	1.56
PF07687	M20_dimer	1.56
PF01261	AP_endonuc_2	1.56
PF12543	DUF3738	1.56
PF03069	FmdA_AmdA	1.56
PF07859	Abhydrolase_3	1.56
PF02635	DrsE	1.56
PF10503	Esterase_PHB	0.78
PF00849	PseudoU_synth_2	0.78
PF00701	DHDPS	0.78
PF13738	Pyr_redox_3	0.78
PF13709	DUF4159	0.78
PF10282	Lactonase	0.78
PF00999	Na_H_Exchanger	0.78
PF07638	Sigma70_ECF	0.78
PF11376	DUF3179	0.78
PF00753	Lactamase_B	0.78
PF13442	Cytochrome_CBB3	0.78
PF00171	Aldedh	0.78
PF00083	Sugar_tr	0.78
PF00326	Peptidase_S9	0.78
PF12867	DinB_2	0.78
PF06271	RDD	0.78
PF02630	SCO1-SenC	0.78
PF13360	PQQ_2	0.78
PF03473	MOSC	0.78
PF03475	3-alpha	0.78
PF03781	FGE-sulfatase	0.78
PF06983	3-dmu-9_3-mt	0.78
PF03551	PadR	0.78
PF00149	Metallophos	0.78
PF00873	ACR_tran	0.78
PF05635	23S_rRNA_IVP	0.78
PF13561	adh_short_C2	0.78
PF00196	GerE	0.78
PF13616	Rotamase_3	0.78
PF00106	adh_short	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.25
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.56
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	1.56
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.78
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.78
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.78
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.78
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.78
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.78
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.78
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.78
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.78
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.78
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.78
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.78
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.31 %
Unclassified	root	N/A	29.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.31 %
Unclassified	root	N/A	29.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.31 %
Unclassified	root	N/A	29.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.97 %
Unclassified	root	N/A	29.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.56 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.44 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.44 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.56 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.44 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.78 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.78 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.44 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.56 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.56 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.78 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01CT137	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300000574\|JGI1357J11328_10211234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300001372\|YBBDRAFT_1149844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1620	Open in IMG/M
3300004114\|Ga0062593_100185469	Not Available	1635	Open in IMG/M
3300004114\|Ga0062593_100789129	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300004479\|Ga0062595_100394885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300004643\|Ga0062591_101240614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	729	Open in IMG/M
3300005332\|Ga0066388_105587074	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_107402522	Not Available	551	Open in IMG/M
3300005334\|Ga0068869_101962478	Not Available	525	Open in IMG/M
3300005336\|Ga0070680_101313499	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300005338\|Ga0068868_101093700	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005436\|Ga0070713_100723370	Not Available	951	Open in IMG/M
3300005441\|Ga0070700_100739104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005445\|Ga0070708_100982083	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300005458\|Ga0070681_11583463	Not Available	580	Open in IMG/M
3300005459\|Ga0068867_102183555	Not Available	525	Open in IMG/M
3300005467\|Ga0070706_102038633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300005526\|Ga0073909_10051013	All Organisms → cellular organisms → Bacteria → Acidobacteria	1502	Open in IMG/M
3300005526\|Ga0073909_10659507	Not Available	521	Open in IMG/M
3300005536\|Ga0070697_101054496	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005536\|Ga0070697_101207986	Not Available	674	Open in IMG/M
3300005542\|Ga0070732_10272072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300005546\|Ga0070696_100129863	Not Available	1832	Open in IMG/M
3300005577\|Ga0068857_101856664	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005618\|Ga0068864_100450211	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005713\|Ga0066905_101403192	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005718\|Ga0068866_10222331	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300005764\|Ga0066903_100412319	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300005764\|Ga0066903_108144249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005844\|Ga0068862_101052331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300005937\|Ga0081455_10137979	Not Available	1897	Open in IMG/M
3300006050\|Ga0075028_100133668	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300006058\|Ga0075432_10461643	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300006606\|Ga0074062_12174329	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006797\|Ga0066659_10443681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1030	Open in IMG/M
3300006797\|Ga0066659_10971090	Not Available	710	Open in IMG/M
3300006852\|Ga0075433_10665689	Not Available	912	Open in IMG/M
3300006852\|Ga0075433_10875347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300006852\|Ga0075433_10928187	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300006904\|Ga0075424_101196284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300009098\|Ga0105245_12522089	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009147\|Ga0114129_12953916	Not Available	560	Open in IMG/M
3300009551\|Ga0105238_10834076	Not Available	938	Open in IMG/M
3300009551\|Ga0105238_10956394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300009660\|Ga0105854_1308400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010043\|Ga0126380_10708238	Not Available	810	Open in IMG/M
3300010047\|Ga0126382_11386240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010048\|Ga0126373_11417642	Not Available	760	Open in IMG/M
3300010320\|Ga0134109_10346003	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010360\|Ga0126372_12159176	Not Available	605	Open in IMG/M
3300010360\|Ga0126372_12645485	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010361\|Ga0126378_12496510	Not Available	590	Open in IMG/M
3300010362\|Ga0126377_12271477	Not Available	619	Open in IMG/M
3300010362\|Ga0126377_12550607	Not Available	587	Open in IMG/M
3300010362\|Ga0126377_12719920	Not Available	570	Open in IMG/M
3300010362\|Ga0126377_13023623	Not Available	543	Open in IMG/M
3300010366\|Ga0126379_10086460	All Organisms → cellular organisms → Bacteria → Acidobacteria	2738	Open in IMG/M
3300010366\|Ga0126379_12904144	Not Available	573	Open in IMG/M
3300010397\|Ga0134124_11511287	Not Available	700	Open in IMG/M
3300010401\|Ga0134121_11726732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	650	Open in IMG/M
3300010880\|Ga0126350_10721127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2345	Open in IMG/M
3300011270\|Ga0137391_10207223	All Organisms → cellular organisms → Bacteria → Acidobacteria	1704	Open in IMG/M
3300011270\|Ga0137391_11197551	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012198\|Ga0137364_11456586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012212\|Ga0150985_110238827	Not Available	595	Open in IMG/M
3300012469\|Ga0150984_111649295	Not Available	588	Open in IMG/M
3300012685\|Ga0137397_11019925	Not Available	608	Open in IMG/M
3300012922\|Ga0137394_10423998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300012986\|Ga0164304_10700735	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300013296\|Ga0157374_11027797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300014325\|Ga0163163_10635649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300014969\|Ga0157376_10105904	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300015242\|Ga0137412_10610899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300015373\|Ga0132257_102751020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	641	Open in IMG/M
3300015374\|Ga0132255_101882376	Not Available	909	Open in IMG/M
3300016341\|Ga0182035_11010145	Not Available	737	Open in IMG/M
3300017657\|Ga0134074_1363398	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300018482\|Ga0066669_12311595	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	513	Open in IMG/M
3300021080\|Ga0210382_10430033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300021478\|Ga0210402_10633966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300021861\|Ga0213853_11175853	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300025885\|Ga0207653_10067519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300025901\|Ga0207688_10387594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300025914\|Ga0207671_10872538	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300025924\|Ga0207694_10744656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300025925\|Ga0207650_10466244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300025928\|Ga0207700_10925982	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300025928\|Ga0207700_11491746	Not Available	600	Open in IMG/M
3300025934\|Ga0207686_10449423	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300025934\|Ga0207686_10842700	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300025934\|Ga0207686_11666892	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300025936\|Ga0207670_10625972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300025941\|Ga0207711_11696896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	575	Open in IMG/M
3300026023\|Ga0207677_10292520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300026023\|Ga0207677_11475699	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300026095\|Ga0207676_11537468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300026216\|Ga0209903_1068485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300026555\|Ga0179593_1108020	All Organisms → cellular organisms → Bacteria → Acidobacteria	2914	Open in IMG/M
3300027483\|Ga0207637_1010232	Not Available	516	Open in IMG/M
3300027523\|Ga0208890_1087108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027910\|Ga0209583_10071363	Not Available	1275	Open in IMG/M
3300027915\|Ga0209069_10228924	Not Available	959	Open in IMG/M
3300028380\|Ga0268265_11111952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300031226\|Ga0307497_10288081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	748	Open in IMG/M
3300031366\|Ga0307506_10462328	Not Available	531	Open in IMG/M
3300031366\|Ga0307506_10528878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031561\|Ga0318528_10464225	Not Available	680	Open in IMG/M
3300031740\|Ga0307468_101875819	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031770\|Ga0318521_10661744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	633	Open in IMG/M
3300031777\|Ga0318543_10578679	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300031793\|Ga0318548_10151771	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031821\|Ga0318567_10593952	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300031910\|Ga0306923_11568924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300031912\|Ga0306921_12369062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031996\|Ga0308176_12361018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032009\|Ga0318563_10224517	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300032039\|Ga0318559_10487802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032089\|Ga0318525_10408042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	696	Open in IMG/M
3300032163\|Ga0315281_11033098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300032174\|Ga0307470_11594445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300032770\|Ga0335085_11763718	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300032770\|Ga0335085_11928942	Not Available	601	Open in IMG/M
3300032893\|Ga0335069_11807201	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300033004\|Ga0335084_11941464	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300033806\|Ga0314865_110496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	724	Open in IMG/M
3300034268\|Ga0372943_0139494	All Organisms → cellular organisms → Bacteria → Acidobacteria	1464	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.88%
Host-Associated	Host-Associated	28.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.62%
Plants	Host-Associated → Plants	28.12%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Freshwater	Environmental → Aquatic → Freshwater	3.12%
Sediment	Environmental → Aquatic → Sediment	2.34%
Marine	Environmental → Aquatic → Marine	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.09%
Loam	Environmental → Terrestrial → Soil → Loam	14.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.78%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.78%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_06899190	2170459009	Grass Soil	YTHATARLSYREQPVLVQVSLMHRGGIGTSAPTAHGSAVVRGLEGFVDLFVTQIHDANK
JGI1357J11328_102112342	3300000574	Groundwater	HATAKLSYHDRPVLVQVSLMHHGGIGGGAPPAHGPEVLRGLEHFIDLFVTQIHDANK*
YBBDRAFT_11498444	3300001372	Marine Estuarine	QPVLVQVSLIHRGGIGTSAIATHPAAVLHGLEGYVDVFLAQIRDANK*
Ga0062593_1001854692	3300004114	Soil	AAKLSYRDQPVLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFVTQIRDANK*
Ga0062593_1007891291	3300004114	Soil	RLSYRDQPILAQVSLIHRGGLSSSASGAHAAAVTKGLEDYIDLFITQIRNANKD*
Ga0062595_1003948852	3300004479	Soil	YTHAAAKLSYRDQPVLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFVTQIRDANK*
Ga0062591_1012406142	3300004643	Soil	RETPVLVQVSLMHRGGISGGALSTHLASVVRGLQNDVDLLVTQIHDANK*
Ga0066388_1055870742	3300005332	Tropical Forest Soil	SYAQKPVLVQVSLMHRGGIGTSAAAGHAAAVARGLEGYVDLVVAQIRGANQTP*
Ga0066388_1074025222	3300005332	Tropical Forest Soil	LVQVSLMHRGGIGNSAPSSHGAAVSRALEGYVDLFVTQIRAANK*
Ga0068869_1019624781	3300005334	Miscanthus Rhizosphere	SLMHRGGLGTSAPAAHGTAVVRGLEGYVDLFITQIKDANK*
Ga0070680_1013134992	3300005336	Corn Rhizosphere	QPVLVQVSLMHRGGIGSSVPGAHGAAVGRGLQDYVDLFITQIRDANK*
Ga0068868_1010937002	3300005338	Miscanthus Rhizosphere	VLVQVSLMHRGGLGTSAPGAHGTAVVRGLEGYVDLFVTQIKDANK*
Ga0070713_1007233703	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSLMHRGGIGSSGIASHAAAVQKGLEGYVDLFLTQIRDANK*
Ga0070700_1007391041	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SYRDQPVLAQVSLIHRGGMATSGPAAHAASVTRGLENYVDLFVTQIRDANK*
Ga0070708_1009820831	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LVQVSLMHRGGLGSSAPIGHATAVARGLADYVDLFVTQIRDANK*
Ga0070681_115834632	3300005458	Corn Rhizosphere	TAKLAYRDQPVLVQVSLMHRGGIGTTGVVSHAATVARGLESYIDLFVTQIQSANK*
Ga0068867_1021835552	3300005459	Miscanthus Rhizosphere	VLAQVSLMHRGGMGSSAPSAHAAEITRGLENYVDAFIKQVKDANK*
Ga0070706_1020386331	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AYHDRPVLVQISLAHRGGIGSSASTAHAAAVGRGLESFVDLFITQIHDANK*
Ga0073909_100510131	3300005526	Surface Soil	TNATASVSYRDQPVLVQVSLIHRGGIATSAPASHSSTVTRGLENYLDLFITQIRDANK*
Ga0073909_106595072	3300005526	Surface Soil	HRGGIGTSGVTAHAASVQRGLEGYVDVFVSQIQQANR*
Ga0070697_1010544962	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HDQPVLVQVSLMHRGGIGSSAPTGHAAAVVHGLENFVDLFITQIHDANK*
Ga0070697_1012079862	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSLMHRGGIGSSAPAAHASAVARGLESYVDLVVQQIRDANR*
Ga0070732_102720722	3300005542	Surface Soil	KLSYHDQPVLVQVSLMHRGGIGSSAPTGHAAAVVRGLVNYVDLFVTQIHDANK*
Ga0070696_1001298631	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LYTHATAKVAYHDRPVLVQISLAHRGGIGSSASTAHAAAVGRGLETFVDLFITQIRDANK
Ga0068857_1018566641	3300005577	Corn Rhizosphere	PVLVQVSLMHRGGIGSSVPSAHPAAVIRGLEGYIDLFITQIRDANK*
Ga0068864_1004502113	3300005618	Switchgrass Rhizosphere	YRDQPVLVQVSLIHRGGIATSSPASHSSTVTRGLENYVDLFITQIRDANK*
Ga0066905_1014031921	3300005713	Tropical Forest Soil	PVLAQVSLMHRGGLGASAVAVHSASVLRGLEGYVDIFVMQIRDANK*
Ga0068866_102223311	3300005718	Miscanthus Rhizosphere	LYTHATARLTYREQPVLVQVSLMHRGVIGASTVAGHAAAVSRGLESYVDVFVTQIRDANK
Ga0066903_1004123191	3300005764	Tropical Forest Soil	SYRQQPVLVQVSLMHRGGIGTSAPVGHAAAVTRGLEGYIDLFVEQIREANK*
Ga0066903_1081442491	3300005764	Tropical Forest Soil	TAKLSYRDQPVLVQVSLIHRGGIGSSAQPVHAAAVVRGLEGQIDLLVTQIRDANK*
Ga0068862_1010523312	3300005844	Switchgrass Rhizosphere	VLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFVTQIRDANK*
Ga0081455_101379792	3300005937	Tabebuia Heterophylla Rhizosphere	YTHATANLTYRDRPVLVQVSLMHRGGIGTSAPAAHGAAVQRGLEGYVDLFITQIRDANK*
Ga0075028_1001336681	3300006050	Watersheds	RDQPVLVQVSLIHRGGIGTSTPTAHSAAVVRGLEGYIDLFVTQVHDANK*
Ga0075432_104616432	3300006058	Populus Rhizosphere	LSYRERPVLVQVSLMHRGGMGSSAPAGHAAAVGRGLESYIDLFVDQIRNANK*
Ga0074062_121743292	3300006606	Soil	DQPVLVQVSLIHRGGIGSSVPAAHAGAVGRGLESYIDPFVTQIRDANK*
Ga0066659_104436811	3300006797	Soil	THATARLAYRDQPVLVQVSLMHRGGIGSSAIATHAAAVSRGLEAYIDLFVTQIRDANK*
Ga0066659_109710901	3300006797	Soil	HRGGIGSSAIATHAAAVSRGLEGYIDLFVTQIRDANK*
Ga0075433_106656892	3300006852	Populus Rhizosphere	QVSLMHRGGIGTSAPTGHAAAVTRGLETYVDLFITQIRDANK*
Ga0075433_108753472	3300006852	Populus Rhizosphere	VQVSLMHRGGITTSAPASHSSTVARGLENYVDLFITQIRDANK*
Ga0075433_109281872	3300006852	Populus Rhizosphere	VQVSLMHRGGIGSSAPAAHAAAVARGLENYIDLIVTQIRDANK*
Ga0075424_1011962841	3300006904	Populus Rhizosphere	LYTHGTAKLSYREQPVLVQVSLMHRGGLGSSAPAGHASAVARGLENYVDLFVTQIHDANK
Ga0105245_125220891	3300009098	Miscanthus Rhizosphere	QPVLVQVSLMHRGGLGTSAPAAHGTAVVRGLEGYVDLFVTQIKDANK*
Ga0114129_129539161	3300009147	Populus Rhizosphere	YRDQPVLVQVSLMHRGSIGSSAPAGHAAAVAHGLEGFVDLFIAQIRDANK*
Ga0105238_108340761	3300009551	Corn Rhizosphere	RPVLVQVSLMHRGGIGVSGLSSHAASIARGLEGYVDVFVTQIRDANK*
Ga0105238_109563942	3300009551	Corn Rhizosphere	PVLVQVSLMHRGGIGTSAPAAHSAAVVRGLTGYVDLFVTQIRDANK*
Ga0105854_13084002	3300009660	Permafrost Soil	LSYHDQPVLVQVSLMHRGGMGTSAPTAHGAAVVRGLEEYVDLFITQIRDANK*
Ga0126380_107082383	3300010043	Tropical Forest Soil	AKLTYREQPVLVQVSLMHRGGIGTSSAAAHPAAVSRGLGGYIDVFVTQIRDANK*
Ga0126382_113862402	3300010047	Tropical Forest Soil	RPVLVQVSLIHRGGIGSSAPSAHAATIARGLESYIDLFVTQIRQANK*
Ga0126373_114176423	3300010048	Tropical Forest Soil	VSLMHRAGIGSSAAASHAAAVSHGLEGYVDLFVSQIRDANK*
Ga0134109_103460032	3300010320	Grasslands Soil	VSLIHRGGMGSSAPTGHAAAVSRGLETYVDLFITQIREANK*
Ga0126372_121591761	3300010360	Tropical Forest Soil	LMHRGGMTSGPPGAHAVSVGRGLEGYIDLIVSQIRDANK*
Ga0126372_126454852	3300010360	Tropical Forest Soil	TATLSYRDRPVLVQVSLMHRGGMTSGVPPAHATTVTRGLEAYVDTFMTQIREANK*
Ga0126378_124965102	3300010361	Tropical Forest Soil	GIGTSAPVGHAGAVTRGLENYVDLFVTQIHDANK*
Ga0126377_122714771	3300010362	Tropical Forest Soil	PVLVQVSLMHRGGIGTSAPTAHAAAVTRGLETYVDLIVSQIQSANK*
Ga0126377_125506071	3300010362	Tropical Forest Soil	SGIAASASALHASTLTRGLEQYIDLVITQIRDANK*
Ga0126377_127199201	3300010362	Tropical Forest Soil	RGGIGASAMAVHSASVLRGLDGYIDLFVMQIRQANQ*
Ga0126377_130236232	3300010362	Tropical Forest Soil	VSLMHRGGIGTSAPTAHAAAVTRGLEGYVDLIVSQIQQANK*
Ga0126379_100864601	3300010366	Tropical Forest Soil	ANQSYRDRPVLVQVSLMHRGGIGSSVPASHAAAVSRGLENYVDLIVTQIKNANK*
Ga0126379_129041441	3300010366	Tropical Forest Soil	HRGGIGSSAPAGHAGAVTRALEGYADVMVSQIRSANQ*
Ga0134124_115112871	3300010397	Terrestrial Soil	ASLSYRDQPVLVQVSLMHRGGIGSSAPVSHATAVTRGLENFIDLFVSQIRGANQ*
Ga0134121_117267322	3300010401	Terrestrial Soil	MHRGGISGGALSTHAATVVRGLQNYIDLFVTQIHDANK*
Ga0126350_107211272	3300010880	Boreal Forest Soil	LSYRDQPVLVQVSLMHRGGIGTSAPTAHSTAVVRGLEGYIDLFVTQVHDANK*
Ga0137391_102072233	3300011270	Vadose Zone Soil	VLVQVSLMHRGGIGTSAAAAHGAAVVRGLEDYIDLFVTQIHAANK*
Ga0137391_111975512	3300011270	Vadose Zone Soil	YGDRPALVQVSLMHRGGLGSSAPTGHATAVARGLADYVDLFVTQIRDANK*
Ga0137364_114565862	3300012198	Vadose Zone Soil	IHRGGIGSSAPVGHAGAVTRGLEDYVGLFVTQIRDANK*
Ga0150985_1102388273	3300012212	Avena Fatua Rhizosphere	VSLMHRGGIGASGVAGHAAAVSRGLEGYVDVFVTQIRDANK*
Ga0150984_1116492953	3300012469	Avena Fatua Rhizosphere	SLMHRGGIGASGVAGHAAAVSRGLEGYVDVFVTQIRDANK*
Ga0137397_110199251	3300012685	Vadose Zone Soil	RGGIGSSAPAAHGAAVTRGLESYVDLFMTQIHDANK*
Ga0137394_104239982	3300012922	Vadose Zone Soil	VLVQVSLMHRGGIGSSAIATHAAAVSRGLEGYIDLFVTQIRDANK*
Ga0164304_107007351	3300012986	Soil	GKPPYPHPAGVVPVSLMHRGGIGSSAQPGHAAAVTRGLENQIDLFVTQIRDANK*
Ga0157374_110277972	3300013296	Miscanthus Rhizosphere	AKLSYRDQPVLVQVSLMHRGGIGTSAPSAHGAAVVRGLAGYVDLFVTQIRDANK*
Ga0163163_106356493	3300014325	Switchgrass Rhizosphere	EQPVLVQVSLMHRGGIGASAVSGHAAAVSRGLESYVDVFVTQIRDANK*
Ga0157376_101059041	3300014969	Miscanthus Rhizosphere	GIGTSAPASHAAAVARGLQGYIDLFVTQIHDANK*
Ga0137412_106108992	3300015242	Vadose Zone Soil	LSYREQPVLVQVSLMHRGGIGTSAPTAHSAAVVRGLEGYIDLFVTQIHDANK*
Ga0132257_1027510202	3300015373	Arabidopsis Rhizosphere	LIHRGGIATSAPALHSPTVTRGLESYIDLFVTQIRDANK*
Ga0132255_1018823761	3300015374	Arabidopsis Rhizosphere	VLVQVSLMHRGGISASSMASHAASVSRGLEGYVDVFLMQIATANK*
Ga0182035_110101452	3300016341	Soil	ERPVLVQVSLMHRGGIGTSAPSAHAAAVTHGLENYIDLVMTQIHDANK
Ga0134074_13633981	3300017657	Grasslands Soil	HQQPVLVQVSLLHRGGIGASGVASHAAAVSRGLEGYVDLFVTQIRDANK
Ga0066669_123115952	3300018482	Grasslands Soil	KLSYRDQSVLAQVSLMHRGSIGTSTPTTHAAAVARGLENYVDLFVTQIHDANK
Ga0210382_104300332	3300021080	Groundwater Sediment	EQPVLVQVSLMHRGGIGSSAPAAHGAAVVSALENFIDLFMTQIHDANR
Ga0210402_106339662	3300021478	Soil	GGIGASAIGPHSASVVRGLEGYVDVFVSQIRDANK
Ga0213853_111758532	3300021861	Watersheds	VSLMHRGGIGSSAPTAHAAAVVRGLQNYVDLFVTQVRDANK
Ga0207653_100675193	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	QVSLIHRGGLSSSASGAHAAAVTKGLEDYIDLFITQIRNANKD
Ga0207688_103875942	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	AAKLSYRDQPVLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFVTQIRDANK
Ga0207671_108725382	3300025914	Corn Rhizosphere	DRPVLVQVSLMHRGGIGTSAPASHAAAVARGLQGYIDLFVTQIHDANK
Ga0207694_107446563	3300025924	Corn Rhizosphere	RPVLVQVSLMHRGGIGVSGLSSHAASIARGLEGYVDVFVTQIRDANK
Ga0207650_104662441	3300025925	Switchgrass Rhizosphere	AKLSYRDQAVLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFISQIRAANK
Ga0207700_109259822	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLVQVSLIHRGGIGASAPATHAATVGRGLQNYIDLVVTQIHDANK
Ga0207700_114917461	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSLMHRGGIGSSGIASHAAAVQKGLEGYVDLFLTQIRDANK
Ga0207686_104494231	3300025934	Miscanthus Rhizosphere	ATAKLSYREQPVLVQVSLMHRGGLGTSAPGAHGTAVVRGLEGYVDLFVTQIKDANK
Ga0207686_108427002	3300025934	Miscanthus Rhizosphere	VLVQVSLMHRGGIGSSGTPAAHAAAVVHGLENYIDLFVTQIHAANK
Ga0207686_116668921	3300025934	Miscanthus Rhizosphere	SYREQPVLVQVSLMHRGGLGTSAPAAHGTAVVRGLEGYVDLFVTQIKDANK
Ga0207670_106259722	3300025936	Switchgrass Rhizosphere	MHRGGIGTSAPAGHGAAVGRGLAGYIDLFVTQIRDANK
Ga0207711_116968962	3300025941	Switchgrass Rhizosphere	QVSLIHRGGIATSAPALHSPTVTRGLENYIDLFVTQIRDANK
Ga0207677_102925201	3300026023	Miscanthus Rhizosphere	ARLTYREQPVLVQVSLMHRGGIGASAVSGHAAAVSRGLESYVDVFVTQIRDANK
Ga0207677_114756992	3300026023	Miscanthus Rhizosphere	RGGLGTSAPGAHGTAVVRGLEGYVDLFVTQIKDANK
Ga0207676_115374682	3300026095	Switchgrass Rhizosphere	SLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFITQIRDANK
Ga0209903_10684851	3300026216	Soil	KPVLVQVSLIHRGGIGTSASTAHGTAVVRGLEGYIDLFITQVRDANK
Ga0179593_11080204	3300026555	Vadose Zone Soil	LSYREQQVLVAGVADAPAAAIGTSAPTAHSSAVVRGLEGYIDLFVTQIHDANK
Ga0207637_10102321	3300027483	Soil	VLVQVSLMHRGGISGGALSTHAASVVRGLQNDVDVIVTQVRDANK
Ga0208890_10871081	3300027523	Soil	AYHEQPVLVQVSLIHRGGIGASTTTGHAAAVSRGLEGYIDIFLTQIRDANK
Ga0209583_100713632	3300027910	Watersheds	LSYRDKSVLVQVSLMHRGGIGSSAAAAHAAAVTGGLQGYVDVFVTQVRDANK
Ga0209069_102289242	3300027915	Watersheds	SVLVQVSLMHRGGIGSSAAAAHAAAVTGGLQGYVDLFVTQVRDANK
Ga0268265_111119522	3300028380	Switchgrass Rhizosphere	PVLVQVSLMHRGGIGTSAPSAHGAAVGRGLAGYVDLFISQIRAANK
Ga0307497_102880811	3300031226	Soil	VSLMHRGGIGSSAQAAHAAAVTRGLESHLDLFVTQIRDANK
Ga0307506_104623282	3300031366	Soil	VQVSLMHRGGIGTSSVAGHAASVSRGLENYVDLFLTQIQTANK
Ga0307506_105288782	3300031366	Soil	TARLTYREQPVLVQVSLTHRGGIGASAVSGHAAAVSRGLESYIDVFVTQIRDANK
Ga0318528_104642252	3300031561	Soil	SYTERPVLVQVSLMHRGGIGTSAPSAHAAAVTHGLENYIDLVMTQIHDANK
Ga0307469_108624842	3300031720	Hardwood Forest Soil	LVQVSLMHRGGLASGVPPAHATTVTHGLEAYADTFMTQIRDANK
Ga0307468_1018758192	3300031740	Hardwood Forest Soil	DQPVLVQVSLMHRGGMGSSAPVGHAAAVSRGLENYLDLFITQVRDANK
Ga0318521_106617442	3300031770	Soil	LMHRGGMASSAPSAHATGVTRGLEGYVDLLVTQVRDANK
Ga0318543_105786792	3300031777	Soil	HERPVLVQVSLMHRGGIGASAVAAHGASVLRGLEGYVDVFVTQIRDANR
Ga0318548_101517711	3300031793	Soil	GGIGSSAPVGHAAAVTRGLENYVDLFVTQIRDANK
Ga0318567_105939522	3300031821	Soil	RDRPVLVQVSLMHRGGIGTSAPAAHAAAVARGLQGYIDLFITQIHDANK
Ga0306923_115689242	3300031910	Soil	YRDRPVLVQVSLMHRGGMGSSAPTGHAAAVTRALEDYLGGFITQIRDANK
Ga0306921_123690622	3300031912	Soil	SYHERPVLVQVSLMHRGGIGASAMAVHSASVLRGLEGYVDVFVTQIRDANK
Ga0308176_123610182	3300031996	Soil	SYRDQPVLVQVSLMHRGGIGTSAPSAHGAAVMRGLAGYVDLFVTQIRDANK
Ga0318563_102245171	3300032009	Soil	LSYRDQPVLVQVSLMHRGGIGSSAPVGHAAAVTRGLENYVDLFVTQIRDANK
Ga0318559_104878022	3300032039	Soil	YTQGTATLSYRDRPVLVQVSLMHRGGIGTSAPAAHAAAVARGLQGYIDLFITQIHDANK
Ga0318525_104080421	3300032089	Soil	VYLYTHATAKVSCRDQAVLVQVSLMHRGGMASSAPSAHATGVTRGLEGYVDLLVTQVRDANK
Ga0315281_110330981	3300032163	Sediment	KLSHRDQPVLVQVSLMHRGSIDSSVVSGHAAAVTRGLASYIDAFVTQIQSANK
Ga0307470_115944451	3300032174	Hardwood Forest Soil	LSYRDQPVLVQVSLMHRGGLGSSAPSAHAAAVTRGLETYLDLFMTQIRDANK
Ga0335085_117637182	3300032770	Soil	LVQVSLMHRGGLGTSGPSAHAAAVTRGLEGYVDLFLTQIRDANK
Ga0335085_119289421	3300032770	Soil	SLIHRGGIGASAAAGHASAVSRGLEGYIDVFLTQIRDANK
Ga0335069_118072012	3300032893	Soil	SYREQPVLVQVSLMHRGGIGTSGMTSHSAAVTRGLEAYVDLFLSQIHDANK
Ga0335084_119414641	3300033004	Soil	QISLMHRGSIGSSSAPGTHAAAVARGLESYVDLFLTQIKNANK
Ga0314865_110496_549_722	3300033806	Peatland	HATATLSYREQPALVQVSLMHRGGIGSSAPAGHASAVSRALEGYVDVFVTQIRDANR
Ga0372943_0139494_1310_1426	3300034268	Soil	MHRGGIGNSAPSAHPAAVVRGLVSFVDLFVTQIRDANK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences