Metagenome / Metatranscriptome Family F065248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	59 residues
Representative Sequence	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHTLQIARTCTSLVDRLETFDQA
Number of Associated Samples	103
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.06 %
% of genes near scaffold ends (potentially truncated)	28.91 %
% of genes from short scaffolds (< 2000 bps)	73.44 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil (11.719 % of family members)
Environment Ontology (ENVO)	Unclassified (33.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.65% β-sheet: 0.00% Coil/Unstructured: 42.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.7.1.0: automated matches	d6xs4a_	6xs4	0.90304
a.25.1.1: Ferritin	d1yuza1	1yuz	0.89529
a.25.1.1: Ferritin	d1lkoa1	1lko	0.89188
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.89108
c.7.1.0: automated matches	d5fava1	5fav	0.8878

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13545	HTH_Crp_2	47.66
PF09939	DUF2171	4.69
PF00486	Trans_reg_C	3.12
PF00072	Response_reg	2.34
PF03083	MtN3_slv	2.34
PF06240	COXG	1.56
PF13551	HTH_29	0.78
PF00027	cNMP_binding	0.78
PF02776	TPP_enzyme_N	0.78
PF17200	sCache_2	0.78
PF00939	Na_sulph_symp	0.78
PF13426	PAS_9	0.78
PF07369	DUF1488	0.78
PF13185	GAF_2	0.78
PF07536	HWE_HK	0.78
PF02530	Porin_2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4095	Sugar transporter, SemiSWEET family, contains PQ motif	Carbohydrate transport and metabolism [G]	2.34
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	1.56
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.78
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.78
COG3637	Opacity protein LomR and related surface antigens	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.78
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.91 %
Unclassified	root	N/A	21.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.91 %
Unclassified	root	N/A	21.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.12 %
Unclassified	root	N/A	21.09 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.97 %
Unclassified	root	N/A	21.09 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.19 %
Unclassified	root	N/A	21.09 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.78 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.84 %
Unclassified	root	N/A	21.09 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	36.72 %
Unclassified	root	N/A	21.09 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.56 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.16 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	3.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.56 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.09 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	3.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.56 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.09 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	3.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.56 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.78 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.78 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908029\|A2_v1_NODE_42463_len_5715_cov_12_138582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5765	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig23922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3103	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig71043	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig104884	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig52525	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
2140918007\|ConsensusfromContig127756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2279	Open in IMG/M
3300001384\|JGI20190J14840_1009767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	920	Open in IMG/M
3300001536\|A1565W1_11212547	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300001593\|JGI12635J15846_10323093	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300001593\|JGI12635J15846_10522977	Not Available	697	Open in IMG/M
3300002245\|JGIcombinedJ26739_100066075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3326	Open in IMG/M
3300003369\|JGI24140J50213_10024570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2239	Open in IMG/M
3300003369\|JGI24140J50213_10045628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1569	Open in IMG/M
3300005045\|Ga0071328_157359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2485	Open in IMG/M
3300005944\|Ga0066788_10155343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	584	Open in IMG/M
3300005950\|Ga0066787_10012096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1397	Open in IMG/M
3300005950\|Ga0066787_10018937	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005950\|Ga0066787_10080641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	669	Open in IMG/M
3300005952\|Ga0080026_10017044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1742	Open in IMG/M
3300005993\|Ga0080027_10003735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5734	Open in IMG/M
3300005993\|Ga0080027_10037006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1750	Open in IMG/M
3300005993\|Ga0080027_10043024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1626	Open in IMG/M
3300005993\|Ga0080027_10128208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	965	Open in IMG/M
3300005994\|Ga0066789_10017717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3152	Open in IMG/M
3300005994\|Ga0066789_10315688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	653	Open in IMG/M
3300005994\|Ga0066789_10442639	Not Available	543	Open in IMG/M
3300005995\|Ga0066790_10078635	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300006047\|Ga0075024_100321255	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006638\|Ga0075522_10025956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3614	Open in IMG/M
3300006795\|Ga0075520_1351243	Not Available	601	Open in IMG/M
3300006864\|Ga0066797_1139132	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006893\|Ga0073928_10104601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2367	Open in IMG/M
3300007255\|Ga0099791_10170632	Not Available	1021	Open in IMG/M
3300007819\|Ga0104322_120295	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300009029\|Ga0066793_10280785	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300009088\|Ga0099830_10709768	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300009143\|Ga0099792_10959377	Not Available	569	Open in IMG/M
3300009545\|Ga0105237_10622370	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300009633\|Ga0116129_1002799	All Organisms → cellular organisms → Bacteria → Proteobacteria	8696	Open in IMG/M
3300009633\|Ga0116129_1007598	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300009633\|Ga0116129_1021803	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300009635\|Ga0116117_1005676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3307	Open in IMG/M
3300009649\|Ga0105855_1233735	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009650\|Ga0105857_1162651	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009651\|Ga0105859_1103216	Not Available	769	Open in IMG/M
3300009661\|Ga0105858_1199350	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009662\|Ga0105856_1274855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	555	Open in IMG/M
3300009662\|Ga0105856_1360966	Not Available	500	Open in IMG/M
3300009665\|Ga0116135_1026093	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300010856\|Ga0126358_1207725	Not Available	509	Open in IMG/M
3300010862\|Ga0126348_1260845	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300010864\|Ga0126357_1309768	Not Available	523	Open in IMG/M
3300010880\|Ga0126350_11709794	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300012685\|Ga0137397_10040475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3332	Open in IMG/M
3300012930\|Ga0137407_10991364	Not Available	796	Open in IMG/M
3300013503\|Ga0120127_10160521	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014495\|Ga0182015_10088991	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300014501\|Ga0182024_10263672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2301	Open in IMG/M
3300014501\|Ga0182024_10762415	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300014501\|Ga0182024_11014299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	988	Open in IMG/M
3300015160\|Ga0167642_1003044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3250	Open in IMG/M
3300015206\|Ga0167644_1049402	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300015206\|Ga0167644_1104590	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300017946\|Ga0187879_10073525	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300017948\|Ga0187847_10015864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4790	Open in IMG/M
3300018034\|Ga0187863_10668083	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300018037\|Ga0187883_10284546	Not Available	845	Open in IMG/M
3300018042\|Ga0187871_10329604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	844	Open in IMG/M
3300018043\|Ga0187887_10094463	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300019789\|Ga0137408_1383158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8470	Open in IMG/M
3300019887\|Ga0193729_1071459	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300019887\|Ga0193729_1076783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1308	Open in IMG/M
3300019890\|Ga0193728_1110683	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300020012\|Ga0193732_1023337	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300020021\|Ga0193726_1299312	Not Available	624	Open in IMG/M
3300021086\|Ga0179596_10014694	Not Available	2684	Open in IMG/M
3300021180\|Ga0210396_10547860	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300022557\|Ga0212123_10160204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1723	Open in IMG/M
3300022561\|Ga0212090_10088378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3037	Open in IMG/M
3300024330\|Ga0137417_1287939	Not Available	1437	Open in IMG/M
3300024330\|Ga0137417_1296183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1555	Open in IMG/M
3300025153\|Ga0209512_1208311	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300025463\|Ga0208193_1002419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7553	Open in IMG/M
3300025463\|Ga0208193_1005964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4204	Open in IMG/M
3300025463\|Ga0208193_1068334	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025504\|Ga0208356_1001954	All Organisms → cellular organisms → Bacteria	4971	Open in IMG/M
3300025505\|Ga0207929_1085121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	595	Open in IMG/M
3300025627\|Ga0208220_1126563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	667	Open in IMG/M
3300025914\|Ga0207671_10651485	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300026214\|Ga0209838_1000353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5934	Open in IMG/M
3300026215\|Ga0209849_1078764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	581	Open in IMG/M
3300026217\|Ga0209871_1000256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15084	Open in IMG/M
3300026271\|Ga0209880_1088554	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026273\|Ga0209881_1112245	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026281\|Ga0209863_10243367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	516	Open in IMG/M
3300026291\|Ga0209890_10010401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3793	Open in IMG/M
3300026291\|Ga0209890_10216407	Not Available	608	Open in IMG/M
3300026355\|Ga0257149_1055110	Not Available	576	Open in IMG/M
3300026515\|Ga0257158_1110594	Not Available	547	Open in IMG/M
3300027521\|Ga0209524_1092224	Not Available	636	Open in IMG/M
3300027535\|Ga0209734_1003093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2894	Open in IMG/M
3300027603\|Ga0209331_1104201	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	692	Open in IMG/M
3300027610\|Ga0209528_1152040	Not Available	505	Open in IMG/M
3300027678\|Ga0209011_1008612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3446	Open in IMG/M
3300027678\|Ga0209011_1035396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1570	Open in IMG/M
3300027862\|Ga0209701_10703625	Not Available	520	Open in IMG/M
3300027908\|Ga0209006_10531391	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300027915\|Ga0209069_10457331	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300028047\|Ga0209526_10004360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9651	Open in IMG/M
3300028789\|Ga0302232_10130748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1273	Open in IMG/M
3300028879\|Ga0302229_10149462	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300029944\|Ga0311352_10842710	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300029945\|Ga0311330_10364920	Not Available	1213	Open in IMG/M
3300029951\|Ga0311371_10968601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1017	Open in IMG/M
3300029952\|Ga0311346_11257419	Not Available	572	Open in IMG/M
3300029984\|Ga0311332_11177554	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300029987\|Ga0311334_11883020	Not Available	511	Open in IMG/M
3300030007\|Ga0311338_10195797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2337	Open in IMG/M
3300030007\|Ga0311338_10355351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1592	Open in IMG/M
3300030053\|Ga0302177_10145320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1340	Open in IMG/M
3300030688\|Ga0311345_10908302	Not Available	674	Open in IMG/M
3300031233\|Ga0302307_10625366	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031234\|Ga0302325_11020275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1127	Open in IMG/M
3300031708\|Ga0310686_102838313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3600	Open in IMG/M
3300031708\|Ga0310686_112127042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2164	Open in IMG/M
3300031902\|Ga0302322_103763247	Not Available	518	Open in IMG/M
3300032119\|Ga0316051_1034752	Not Available	504	Open in IMG/M
3300034130\|Ga0370494_201298	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.81%
Aquatic	Environmental → Aquatic	15.62%
Plants	Host-Associated → Plants	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.09%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Peat	Environmental → Terrestrial → Peat	11.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.56%
Sediment	Environmental → Aquatic → Sediment	1.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.94%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Ice	Environmental → Aquatic → Freshwater → Ice	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	25.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	13.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.34%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.25%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	4.69%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	4.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.12%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.34%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.34%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.34%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025153	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_v1_00034480	2124908029	Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRLETFDQAAAAPSPRMH
A2_c1_01217440	2124908043	Soil	MSRSEQLLRDDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRPETFDQAAAGASPRMH
A2_c1_00475750	2124908043	Soil	VSEAEQSLRDDLDCLRLASDLTRLASYIPSAALKAHILRIARTCTSMVEGPRIQATRAFPRKH
A5_c1_01642990	2124908044	Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTSLVDRLETFDQAAAEPSPRMH
A5_c1_00892040	2124908044	Soil	MSKSEQLLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGLVDRPETFNQAAIAFPHKH
A_all_C_02583060	2140918007	Soil	MSRSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRPETFDQAAAGASARMH
JGI20190J14840_10097672	3300001384	Arctic Peat Soil	MSKSEQLLRDDLDCLRLASDLTQLASDALSPALKSYLLQLARTCTSLVDRLETRH*
A1565W1_112125472	3300001536	Permafrost	MSKSEQLLRDDLDCLRLASDLTQLASNALSPALKSILLQLAKTCNGLVDRLKTRH*
JGI12635J15846_103230932	3300001593	Forest Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASTRTH*
JGI12635J15846_105229771	3300001593	Forest Soil	MMNDLDCLRLASDLTQLASVISSAVLRAYILQLARTSTGLVDRL
JGIcombinedJ26739_1000660752	3300002245	Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQIARTCTSLVDRLETFDRAAARAPARTH*
JGI24140J50213_100245705	3300003369	Arctic Peat Soil	MSKSEPLLNDLDCLRLASDLTQLASNVPSATLKAYILQLARTCTGLVDRAGNQTLN*
JGI24140J50213_100456283	3300003369	Arctic Peat Soil	MSKSEPLLRNDLDCLRLASDLTQLASNVPSATLKAYILRLARTCTGLVDRAGNLTLN*
Ga0071328_1573595	3300005045	Permafrost	MSKSEQLLRDRDDLDCLRLASDLTQSARKTLNPALKLYLLRLARAANGLVERLETRH*
Ga0066788_101553432	3300005944	Soil	MSESEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRPETFDQAAAEPSPRIH*
Ga0066787_100120962	3300005950	Soil	MSKSEQLLRNDLDCLRLASDRTRLASYVPSSALKAHILQLARTCTSLVDRLETFDQAAAAPSPRMH*
Ga0066787_100189373	3300005950	Soil	MSESEQLLRDDLDCLRLASDLTRLASYVPCAALKAHILQIARTCTSLVDRLETFDQAAAGASPRLH*
Ga0066787_100806412	3300005950	Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLEPFDQAAAGASARTH*
Ga0080026_100170442	3300005952	Permafrost Soil	MSESEQLLRDDLDCLRLASDLTRLASYVPCAALKAHILQIARTCTSLV
Ga0080027_1000373511	3300005993	Prmafrost Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASARTH*
Ga0080027_100370062	3300005993	Prmafrost Soil	MPTSEQLLRDDLDCLRLASDLTRLASYVPGAALKAHILQIARMCTNLVDRLETFDQAAAGASPRLH*
Ga0080027_100430242	3300005993	Prmafrost Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRLETFDQAAAAPSPRMH*
Ga0080027_101282082	3300005993	Prmafrost Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHTLQIARTCTSLVDRLETFDQAGAAPSPRMH*
Ga0066789_100177177	3300005994	Soil	DLDCLRLASDLTRLASYVPCGALKAHILQIAQTCTSLVDRLEPFDQVAAEASARTH*
Ga0066789_103156882	3300005994	Soil	MSESEQLLRDDLDCLRLASDLTRLASYVPRGALKAHILQIARTCTSLVDRLEPFDQAAAGASARTH*
Ga0066789_104426393	3300005994	Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHTLQIARTCTSLVDRLETFDQA
Ga0066790_100786353	3300005995	Soil	LDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRPETFDQAAAEPSPRIH*
Ga0075024_1003212551	3300006047	Watersheds	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQMARTCTSLVDRLETFDQAAAGASARTH*
Ga0075522_100259564	3300006638	Arctic Peat Soil	MSMSDNLRKHDLDCLRLASDLTQLANDVLSPALRSHLLKMARACTGLVDRAETRH*
Ga0075520_13512431	3300006795	Arctic Peat Soil	MSKSEPLLRSDLDCLRLASDLTQLASNVPSATLKAYILQLARTCTGLVDRAGNLTLN*
Ga0066797_11391322	3300006864	Soil	MSKSKQLLRDDLDCLRLASDLTQLAATISSAALKAYILQLARTCTGLVDRLETRH*
Ga0073928_101046015	3300006893	Iron-Sulfur Acid Spring	MSKSEPLLRNDLDCLRLASDLTQLASNVPSATLKAYILELARTCTGLVNRLETRH*
Ga0099791_101706322	3300007255	Vadose Zone Soil	MSKSEQMLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH*
Ga0104322_1202953	3300007819	Permafrost Soil	MSKLEQLVRDDLDCQRLACDLTQLASNALSPALKSYLLQLARPCTSPVDRLETRH*
Ga0066793_102807852	3300009029	Prmafrost Soil	LLRDDDLDCLRLASDLTQLASDALSPALKQYLLQLSRTCTDLVDRLETRH*
Ga0099830_107097682	3300009088	Vadose Zone Soil	MSKSEQLLRDELDCLRLASDLTRLASYVPSSALKAHILQIARMCTSLVDRLETFDQAAAGASPRMH*
Ga0099792_109593772	3300009143	Vadose Zone Soil	LRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH*
Ga0105237_106223702	3300009545	Corn Rhizosphere	MSKSERSLRDDLDCLRLASDLTQLASNELSPALKAYLLQIALTCTGLVDRLETRH*
Ga0116129_100279913	3300009633	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASDAVSPALKSYLLELAQTCTGLIDRLEPDIE*
Ga0116129_10075987	3300009633	Peatland	MSKSKQLLRDDLDCLRLASDLTQLASNALSPALKAYLLQLARTCTGLVDRLETRH*
Ga0116129_10218032	3300009633	Peatland	MSKSEPLLMSDLDCLRLASDLTQLASNVPSAALKAYILELARTCTGLVNLLETRH*
Ga0116117_10056767	3300009635	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSPVDRLETRH*
Ga0105855_12337352	3300009649	Permafrost Soil	DLDCLRLASDLTRLASYVPRGALKAHILQIARTCTSLVDQLEPFDQAAAGASARTH*
Ga0105857_11626511	3300009650	Permafrost Soil	MSESEQLLRDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASARTH*
Ga0105859_11032161	3300009651	Permafrost Soil	MSESEQLLRDDLDCLRLASDLTRLASYVPRGALKAHTLQIARTCTSLVDRLETFDQAGAAPSPRMH*
Ga0105858_11993502	3300009661	Permafrost Soil	CLRLASDLTQLASNVLSPALKAYLLRMARTCTGLVDRLETRH*
Ga0105856_12748552	3300009662	Permafrost Soil	MSKSEQLLRDDLNCLRLASDLTQLASDVPSAALKAYLLQMARTCTDLVDRL
Ga0105856_13609662	3300009662	Permafrost Soil	MSMSDKLRKHDVDCLRLASDLTQLASEVLSPALRTHLLQMARACTGLVERA
Ga0116135_10260935	3300009665	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALQSYLLQLARTCTSLVDRLETRH*
Ga0126358_12077251	3300010856	Boreal Forest Soil	RRCVMSKSEQLLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPKTFDQAAAVSPPKH*
Ga0126348_12608455	3300010862	Boreal Forest Soil	LATLRRFTMSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASARTH*
Ga0126357_13097681	3300010864	Boreal Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH*
Ga0126350_117097942	3300010880	Boreal Forest Soil	MSKSEQLLKHDLDCLRLASDLTQLASDALSPALKAYLLQLAQTCTGLVDRLETRH*
Ga0137397_100404752	3300012685	Vadose Zone Soil	MSKSEQMLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTAMVDRPETFNQAAVVSPRKH*
Ga0137407_109913642	3300012930	Vadose Zone Soil	MSKSEQMLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMADRPETFNQALKSLRASISVIVS*
Ga0120127_101605212	3300013503	Permafrost	MSKSEPLLNDLDCLRLASDLQQLASNVPSATLKAYILQLARTCTGLVDRAGNQTLN*
Ga0182015_100889913	3300014495	Palsa	MSKSEPLLRSDLDCLRLASDLTQLAGNVPSATLKAYILQLARTCTGLVDRAANQTLN*
Ga0182024_102636724	3300014501	Permafrost	MSKSEQLLRDDLDRLRLASDLTQLASDALSPALKSYLLQLARTCTSLVDRLETRH*
Ga0182024_107624152	3300014501	Permafrost	MSKPEQLLRDDLDCLRLASDLTQLASNALNPALKSYLLQLAQTCTGLVDRLETRH*
Ga0182024_110142992	3300014501	Permafrost	MSKSEQLLRDDLDCLRLASDLTQLASDALSPALKAYLLQLAQTCTSLVDRLETRH*
Ga0167642_10030442	3300015160	Glacier Forefield Soil	MSKSEELLWDDLDCLRLASDLTQLASDALSPALKAYLVQLAQASTGLIDRPKTRH*
Ga0167644_10494021	3300015206	Glacier Forefield Soil	MSKSEQLLKNDLDCLRLASDLTQLASDSLSPALKSYLLQLARTCTSLVDRLETRH*
Ga0167644_11045901	3300015206	Glacier Forefield Soil	MSKSEPLLRNDLDCLRLASDLTQLASSVPSATLKAYILELARTCTGLVDRLETRH*
Ga0187879_100735254	3300017946	Peatland	SDLDCLRLASDLTQLAGNVPSATLKAYILQLARTCTGLVDRAANQTLN
Ga0187847_100158648	3300017948	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALQSYLLQLARTCTSLVDRLETRH
Ga0187863_106680832	3300018034	Peatland	AMSKSEPLLRSDLDCLRLASDLTQLAGNVPSATLKAYILQLARTCTGLVDRAANQTLN
Ga0187883_102845461	3300018037	Peatland	MSKSEPLLRSDLDCLRLASDLTQLAGNVPSATLKAYILQLARTCTGLVD
Ga0187871_103296042	3300018042	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALQSYLLQLARTCTSPVDRLETRH
Ga0187887_100944632	3300018043	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSLVDRLETRH
Ga0137408_138315812	3300019789	Vadose Zone Soil	MSKSEQLLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH
Ga0193729_10714593	3300019887	Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCNSLVDRLETFDQAAAGASARTH
Ga0193729_10767832	3300019887	Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSMVDRLETFDQAAAGASARTH
Ga0193728_11106831	3300019890	Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASARTH
Ga0193732_10233371	3300020012	Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTRLVDRLETFDQAAAGASARTH
Ga0193726_12993122	3300020021	Soil	MLKSEQLLRDDLDCLRLASDLTQLASYVPSPALKAYLLRMVRTCNRLVDRPETRH
Ga0179596_100146943	3300021086	Vadose Zone Soil	MMSRSEQLRRDDLDCLRLASDLTRLASYVPCAALKTHILQIARTCTSLVDRLETFDQAAA
Ga0210396_105478602	3300021180	Soil	MSKSEQLLRDDLDCLRLASDLTQLASDALSPALKSYLLELVQTCTGLVDRLEIRH
Ga0212123_101602042	3300022557	Iron-Sulfur Acid Spring	MSKSEPLLRNDLDCLRLASDLTQLASNVPSATLKAYILELARTCTGLVNRLETRH
Ga0212090_100883781	3300022561	Glacier Valley	MSKAEQILRADLDCLRLASDLTQLASNVPSRALKSYLLQMAQTCTRLVDRPETRH
Ga0137417_12879391	3300024330	Vadose Zone Soil	MLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH
Ga0137417_12961832	3300024330	Vadose Zone Soil	MSKSEQMLRDDLDCLRLASDLTRLASYVPSSALKAHILQIARTCTGMVDRPETFNQAAKVSPRKH
Ga0209512_12083112	3300025153	Glacier Valley	RLASDLIQLGNQVPGHALKSYLLQLARTCTRLVERPETRH
Ga0208193_10024191	3300025463	Peatland	MSKSEQLLKDDLDCLRLASDLTQLASDAVSPALKSYLLELAQTCTGLIDRLEPDIE
Ga0208193_10059645	3300025463	Peatland	MSKSEPLLMSDLDCLRLASDLTQLASNVPSAALKAYILELARTCTGLVNLLETRH
Ga0208193_10683341	3300025463	Peatland	VQRLPLADSRRCAMSKSEQLLRDDLDCLRLASDLTQLANDAVSPALKSYLLELAQTCTAMIDRLKLDLE
Ga0208356_10019546	3300025504	Arctic Peat Soil	MSKSEQLLRDDLDCLRLASDLTQLASDALSPALKSYLLQLARTCTSLVDRLETRH
Ga0207929_10851212	3300025505	Arctic Peat Soil	INDSRRCAMSKSEQLLRDDLDRLRLASDLTQLASDALSPALKSYLLQLARTCTSLVDRLETRH
Ga0208220_11265632	3300025627	Arctic Peat Soil	MSKSEQLLRDNLDCLRLASDLTQLASDVLSPALKAYLLQLAQASTGLVDRLETRH
Ga0207671_106514852	3300025914	Corn Rhizosphere	MSKSERSLRDDLDCLRLASDLTQLASNELSPALKAYLLQIALTCTGLVDRLETRH
Ga0209838_10003532	3300026214	Soil	MSKSEQLLRNDLDCLRLASDRTRLASYVPSSALKAHILQLARTCTSLVDRLETFDQAAAAPSPRMH
Ga0209849_10787641	3300026215	Soil	MSESEQLLRNDLDCLRLASDLTRLASYVPSSALKAHILQLARTCTSLVDRPETFDQAAAEPSPRIH
Ga0209871_10002562	3300026217	Permafrost Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPRGALKAHILQIARTCTSLVDRLEPFDQAAAGASARTH
Ga0209880_10885541	3300026271	Soil	ATLRRFTMSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAGASARTH
Ga0209881_11122451	3300026273	Soil	MSKSKQLLRDDLDCLRLASDLTQLAATISSAALKAYILQLARTCTGLVDRLETRH
Ga0209863_102433672	3300026281	Prmafrost Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHTLQIARTCTSLVDRLETFDQAGAAPSPRMH
Ga0209890_100104013	3300026291	Soil	MPTSEQLLRDDLDCLRLASDLTRLASYVPGAALKAHILQIARMCTNLVDRLETFDQAAAGASPRLH
Ga0209890_102164072	3300026291	Soil	MSKSEQLLRNDLDCLRLASDLTRLASYVPSSALKAHTLQIARTCTSLVDRLETFDQAGAA
Ga0257149_10551102	3300026355	Soil	MSRSEQLRRDDLDCLRLASDLTRLASYIPCAALKAHILQIARTCTSMVDRQETFDQA
Ga0257158_11105941	3300026515	Soil	RRCTMSRSEQLRRDDLDCLRLASDLTRLASYIPCAALKAHILQIARTCTSMVDRQETFDQ
Ga0209524_10922241	3300027521	Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQIARTCTSLVDRLET
Ga0209734_10030933	3300027535	Forest Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDQAAAAASARMH
Ga0209331_11042011	3300027603	Forest Soil	MSKSERLLRDDLDCLRLASNLTRLASYVPRAALKAHILQIARTCTSLVDRLETFDQAAAGASA
Ga0209528_11520402	3300027610	Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQIARTCTSLVDRLETFDRAAA
Ga0209011_10086122	3300027678	Forest Soil	MSKSEQLLKDDLDCLRLASDLTRLASYVPCGALKAHILQIARTCTSLVDRLETFDHAAPGASARTH
Ga0209011_10353963	3300027678	Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLANYVPSSALKAHILQIARTCTGMVDQPETFDRAAVVSPPKH
Ga0209701_107036251	3300027862	Vadose Zone Soil	MSKSEQLLRDELDCLRLASDLTRLASYVPSSALKAHILQIARMCTSLVDRLETFDQAAAGASPRMH
Ga0209006_105313912	3300027908	Forest Soil	MSKSEQLLRDDLDCLRLASDLTQLASDALSPALKAYLLQLAQTCTSLVDRLEIRH
Ga0209069_104573312	3300027915	Watersheds	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQMARTCTSLVDRLETFDQAAAGASARTH
Ga0209526_100043607	3300028047	Forest Soil	MSKSEQLLRDDLDCLRLASDLTRLAGYVPSSALKAHILQIARTCTSLVDRLETFDRAAARAPARTH
Ga0302232_101307481	3300028789	Palsa	LPKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSLVDRLETRH
Ga0302229_101494622	3300028879	Palsa	MSKPEQLPKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSLVDRLETRH
Ga0311352_108427101	3300029944	Palsa	PLLRDDLDCLRLASDLTQLASNVPSATLRAYILQLARTCTGLVDRARNQTLN
Ga0311330_103649201	3300029945	Bog	MSGSERKPKDELDCLRLASDLTQLASGSVSPALKSYLLQMAHQRATLVDRPETRH
Ga0311371_109686012	3300029951	Palsa	MSESEQLLRDDLDCLRLASDLTQLASDALSPALKAYLLQLAQTCTSLVDRLETRH
Ga0311346_112574193	3300029952	Bog	LASDLTQLASGSVSPALKSYLLQMAHQRATLVDRPETRH
Ga0311332_111775541	3300029984	Fen	MRDTELSLRADLDCLRLASDLTQLAGTALRPALKSYLLHLAGGCTALVERVETRH
Ga0311334_118830202	3300029987	Fen	VPCSRIDNSRWCAMSKSDHLLRARDDLDCLRLASDLTQSARKTFNPALRLYLLQLARTANSLVEGPETRH
Ga0311338_101957971	3300030007	Palsa	KPEQLPKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSLVDRLETRH
Ga0311338_103553513	3300030007	Palsa	MSKPEQLPKDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCASLV
Ga0302177_101453201	3300030053	Palsa	MSKSEPLLRDDLDCLRLASDLTQLASNVPSATLRAYILQLARTCTGLVDRARNQTLN
Ga0311345_109083021	3300030688	Bog	ELDCLRLASDLTQLASGSVSPALKSYLLQMAHQRATLVDRPETRH
Ga0302307_106253662	3300031233	Palsa	KDDLDCLRLASDLTQLASNALNPALKSYLLQLARTCTSLVDRLETRH
Ga0302325_110202753	3300031234	Palsa	MSESEQLLRDDLDCLRLASDLTQLASDTLSPALRAYLLQLARTCTVMVDRGD
Ga0310686_1028383137	3300031708	Soil	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALQSYLLQLARTCTGLVDRLETRH
Ga0310686_1121270421	3300031708	Soil	MSKSEQLLRDDLDCLRLASDLTQLANDALSPALKAYLLQLAQASTGLIDRPKTRH
Ga0302322_1037632472	3300031902	Fen	MSKSDHLLRARDDLDCLRLASDLTQSARKTFNPALRLYLLQLARTANSLVERPETRH
Ga0316051_10347521	3300032119	Soil	MSKSEQLLKDDLDCLRLASDLTQLASNALNPALQSYLLQLARTCTGLVDR
Ga0370494_201298_2_148	3300034130	Untreated Peat Soil	MSKTEQSLRADLDCLRLASDLTQLASGAVSPALTSYLLQLARTCTGLVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences