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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F065239 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 128 |
| Average Sequence Length | 43 residues |
| Representative Sequence | MIKKKTLKERIEEAKKRNYLTLLQIFDIIITNKGEKHYV |
| Number of Associated Samples | 105 |
| Number of Associated Scaffolds | 128 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 1.56 % |
| Associated GOLD sequencing projects | 94 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.43 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (97.656 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (19.531 % of family members) |
| Environment Ontology (ENVO) | Unclassified (57.031 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.406 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 44.78% β-sheet: 0.00% Coil/Unstructured: 55.22% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 128 Family Scaffolds |
|---|---|---|
| PF11753 | DUF3310 | 14.84 |
| PF01501 | Glyco_transf_8 | 2.34 |
| PF04965 | GPW_gp25 | 1.56 |
| PF03721 | UDPG_MGDP_dh_N | 1.56 |
| PF05050 | Methyltransf_21 | 1.56 |
| PF03407 | Nucleotid_trans | 1.56 |
| PF03477 | ATP-cone | 0.78 |
| PF04545 | Sigma70_r4 | 0.78 |
| PF02867 | Ribonuc_red_lgC | 0.78 |
| COG ID | Name | Functional Category | % Frequency in 128 Family Scaffolds |
|---|---|---|---|
| COG1442 | Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase | Cell wall/membrane/envelope biogenesis [M] | 2.34 |
| COG5597 | N-acetylglucosaminyl transferase | Cell wall/membrane/envelope biogenesis [M] | 2.34 |
| COG0240 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 1.56 |
| COG0677 | UDP-N-acetyl-D-mannosaminuronate dehydrogenase | Cell wall/membrane/envelope biogenesis [M] | 1.56 |
| COG1004 | UDP-glucose 6-dehydrogenase | Cell wall/membrane/envelope biogenesis [M] | 1.56 |
| COG1250 | 3-hydroxyacyl-CoA dehydrogenase | Lipid transport and metabolism [I] | 1.56 |
| COG1893 | Ketopantoate reductase | Coenzyme transport and metabolism [H] | 1.56 |
| COG0209 | Ribonucleotide reductase alpha subunit | Nucleotide transport and metabolism [F] | 0.78 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 97.66 % |
| All Organisms | root | All Organisms | 2.34 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300006403|Ga0075514_1071614 | All Organisms → Viruses → Predicted Viral | 1340 | Open in IMG/M |
| 3300006921|Ga0098060_1035223 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium | 1512 | Open in IMG/M |
| 3300021356|Ga0213858_10000704 | Not Available | 15929 | Open in IMG/M |
| 3300021957|Ga0222717_10000585 | Not Available | 31113 | Open in IMG/M |
| 3300026270|Ga0207993_1007956 | All Organisms → Viruses → Predicted Viral | 3653 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 19.53% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 17.19% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 10.16% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 7.81% |
| Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 6.25% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 6.25% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 4.69% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 3.91% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 3.91% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 3.12% |
| Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 3.12% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 2.34% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 1.56% |
| Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water | 1.56% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.78% |
| Marine Water | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water | 0.78% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 0.78% |
| Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.78% |
| Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 0.78% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.78% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.78% |
| Marine Water | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water | 0.78% |
| Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment | 0.78% |
| Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment | 0.78% |
| Macroalgal Surface | Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface | 0.78% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
| 3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
| 3300000149 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10m | Environmental | Open in IMG/M |
| 3300000949 | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94 | Host-Associated | Open in IMG/M |
| 3300001346 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 | Environmental | Open in IMG/M |
| 3300001419 | Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m) | Environmental | Open in IMG/M |
| 3300001460 | Marine viral communities from the Pacific Ocean - LP-28 | Environmental | Open in IMG/M |
| 3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
| 3300004941 | Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2um | Environmental | Open in IMG/M |
| 3300005057 | Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um | Environmental | Open in IMG/M |
| 3300005512 | Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water | Environmental | Open in IMG/M |
| 3300005523 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 | Environmental | Open in IMG/M |
| 3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
| 3300005971 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A | Environmental | Open in IMG/M |
| 3300006357 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006403 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
| 3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
| 3300007725 | Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG | Environmental | Open in IMG/M |
| 3300007956 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459A_0.2um | Environmental | Open in IMG/M |
| 3300009000 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG | Environmental | Open in IMG/M |
| 3300009027 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG | Environmental | Open in IMG/M |
| 3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
| 3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
| 3300012920 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG | Environmental | Open in IMG/M |
| 3300012928 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG | Environmental | Open in IMG/M |
| 3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
| 3300012952 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome | Environmental | Open in IMG/M |
| 3300012954 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG | Environmental | Open in IMG/M |
| 3300013188 | Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome | Environmental | Open in IMG/M |
| 3300013195 | Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_Metagenome | Environmental | Open in IMG/M |
| 3300017727 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20 | Environmental | Open in IMG/M |
| 3300017730 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13 | Environmental | Open in IMG/M |
| 3300017734 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2) | Environmental | Open in IMG/M |
| 3300017743 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17 | Environmental | Open in IMG/M |
| 3300017758 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30 | Environmental | Open in IMG/M |
| 3300017759 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 | Environmental | Open in IMG/M |
| 3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017818 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017824 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017951 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017952 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017956 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017962 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017964 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018417 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018428 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020175 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2 | Environmental | Open in IMG/M |
| 3300020191 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020258 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949) | Environmental | Open in IMG/M |
| 3300020267 | Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108) | Environmental | Open in IMG/M |
| 3300020269 | Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041) | Environmental | Open in IMG/M |
| 3300020294 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153) | Environmental | Open in IMG/M |
| 3300020301 | Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997) | Environmental | Open in IMG/M |
| 3300020325 | Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966) | Environmental | Open in IMG/M |
| 3300020336 | Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860) | Environmental | Open in IMG/M |
| 3300020365 | Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143) | Environmental | Open in IMG/M |
| 3300020374 | Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618) | Environmental | Open in IMG/M |
| 3300020379 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168) | Environmental | Open in IMG/M |
| 3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
| 3300020409 | Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106) | Environmental | Open in IMG/M |
| 3300020414 | Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028) | Environmental | Open in IMG/M |
| 3300020416 | Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039) | Environmental | Open in IMG/M |
| 3300020421 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007) | Environmental | Open in IMG/M |
| 3300020436 | Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984) | Environmental | Open in IMG/M |
| 3300020437 | Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074) | Environmental | Open in IMG/M |
| 3300020440 | Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043) | Environmental | Open in IMG/M |
| 3300020454 | Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170) | Environmental | Open in IMG/M |
| 3300020469 | Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052) | Environmental | Open in IMG/M |
| 3300020470 | Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053) | Environmental | Open in IMG/M |
| 3300021347 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266 | Environmental | Open in IMG/M |
| 3300021356 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245 | Environmental | Open in IMG/M |
| 3300021364 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304 | Environmental | Open in IMG/M |
| 3300021379 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247 | Environmental | Open in IMG/M |
| 3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300021959 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D | Environmental | Open in IMG/M |
| 3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
| 3300022187 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3) | Environmental | Open in IMG/M |
| 3300022925 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG | Environmental | Open in IMG/M |
| 3300022937 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG | Environmental | Open in IMG/M |
| 3300023119 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG | Environmental | Open in IMG/M |
| 3300023170 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG | Environmental | Open in IMG/M |
| 3300023273 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG | Environmental | Open in IMG/M |
| 3300025120 | Marine viral communities from the Pacific Ocean - LP-28 (SPAdes) | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025695 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025759 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes) | Environmental | Open in IMG/M |
| 3300025816 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes) | Environmental | Open in IMG/M |
| 3300025892 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes) | Environmental | Open in IMG/M |
| 3300025897 | Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes) | Environmental | Open in IMG/M |
| 3300026138 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
| 3300026183 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
| 3300026270 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes) | Environmental | Open in IMG/M |
| 3300027830 | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes) | Environmental | Open in IMG/M |
| 3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300028397 | Seawater microbial communities from Monterey Bay, California, United States - 50D | Environmental | Open in IMG/M |
| 3300029792 | Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052 | Environmental | Open in IMG/M |
| 3300031774 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915 | Environmental | Open in IMG/M |
| 3300032047 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSpr2010_100035407 | 3300000116 | Marine | MHETSVLYVYMIKKKTLKKRIEEAKKRNYLTLLQIFDIIIINKGEKHYV* |
| DelMOWin2010_1000644412 | 3300000117 | Marine | MIKKKTLKERIDEAKKRNYLTLLQIFDIIINNKGEKHYE* |
| DelMOWin2010_100807502 | 3300000117 | Marine | MIKKKTLKQRIEDAKKRNYLTLLQIFGIIFNNNERTNTYE* |
| DelMOWin2010_101452972 | 3300000117 | Marine | MKTLKQRINEARKRNYLTLLQIFDIIMYNKGEKHYV* |
| DelMOWin2010_101650313 | 3300000117 | Marine | MYIMKKDKKTLKQKIEEAKQRNMLTLLHIFDIIINNKGEKHYV* |
| LPaug09P1610mDRAFT_100114315 | 3300000149 | Marine | MHETSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDILTTNKGEKHYV* |
| BBAY94_101954292 | 3300000949 | Macroalgal Surface | MVDSVLYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV* |
| JGI20151J14362_100013944 | 3300001346 | Pelagic Marine | MVDSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE* |
| JGI11705J14877_100153854 | 3300001419 | Saline Water And Sediment | MIKKMTLKERIEKAKKRNYLTLLXIFDIILNNNERTNTYE* |
| JGI24003J15210_100027077 | 3300001460 | Marine | MHETSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDILITNKGEKHYV* |
| Ga0055584_1003296442 | 3300004097 | Pelagic Marine | MVVSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE* |
| Ga0068514_10123961 | 3300004941 | Marine Water | MVDSVLYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINKKGEKHYV* |
| Ga0068511_10454672 | 3300005057 | Marine Water | MIKKTLKERIEDAKKRNYLTLLQILDILLNEKGEKHYVKS* |
| Ga0074648_10305243 | 3300005512 | Saline Water And Sediment | MIKKMTLKERIEKAKKRNYLTLLQIFDIILNNNERTNTYE* |
| Ga0066865_103198792 | 3300005523 | Marine | MHETMVYYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV* |
| Ga0078893_104900412 | 3300005837 | Marine Surface Water | MIKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV* |
| Ga0066370_100755892 | 3300005971 | Marine | MIKKTLTERIEEAKKRNYLTLLDILDILLNKKGQYYVKN* |
| Ga0075502_16011261 | 3300006357 | Aqueous | LKQRIEDAKKRNYLTLLQIFDIILNNNERTNTYE* |
| Ga0075514_10716142 | 3300006403 | Aqueous | MNKTLKQRIQEARQRNYLTLLQIFDILMMNKGEKHYV* |
| Ga0098042_10871822 | 3300006749 | Marine | MHGISVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTDNKKGLI* |
| Ga0070749_101542322 | 3300006802 | Aqueous | MIKKKTLKQRIEDAKKRNYLTLLQIFDIILNNNERTNTYE* |
| Ga0070749_102204341 | 3300006802 | Aqueous | MKTLKQRIKEARRRNYLTLLQIFDIIINEKGEKHYV* |
| Ga0070749_103602952 | 3300006802 | Aqueous | MVYYVYMIKKKTLKEKIDEAKKRNYLTLLQIFDIIINNKGEKHYE* |
| Ga0098060_10352236 | 3300006921 | Marine | MIKKKTLKERIEEAKKRNYLTLLQIFDIIITNKGEKHYV* |
| Ga0070752_11570784 | 3300007345 | Aqueous | T*YYNSMNKTLKQRIKEARRRNYLTLLQIFDIIMYNKGEKHYV* |
| Ga0102951_10005548 | 3300007725 | Water | MIKKKTLKEKIDEAKKRNYLTLLQIFDIIINNKGEKHYE* |
| Ga0102951_11498783 | 3300007725 | Water | MKKDKKTLKQRIEEAKQRNMLTLLHIFDIIINNKGEKHYV* |
| Ga0105741_11698912 | 3300007956 | Estuary Water | MHETSVLYVYMIKKKTLKERIIEAKKRNYLTLLQIFDIIITNKGEKHYVKN* |
| Ga0102960_12529403 | 3300009000 | Pond Water | MKKDKKTLKQRIEEAKKRNYLTLLQIFDIILTYNNKGEKHYG* |
| Ga0102957_10365793 | 3300009027 | Pond Water | MIKKKTLKEKIEEAKKRNYLTLLQLFDTILTYNKGEQ |
| Ga0115566_101461223 | 3300009071 | Pelagic Marine | MIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE* |
| Ga0115011_114613202 | 3300009593 | Marine | MVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTDNK |
| Ga0160423_101195922 | 3300012920 | Surface Seawater | MKKTLIQRIKDARKRNYLTLLDIFGIILYNKGEKHYV* |
| Ga0160423_106158961 | 3300012920 | Surface Seawater | LLFMVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTDNKKGLI* |
| Ga0163110_104839924 | 3300012928 | Surface Seawater | MIKKTLKERIEEAKKRNYLTLLQILDILLNEKGEKHYVKS* |
| Ga0163110_108246181 | 3300012928 | Surface Seawater | MVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTDNKKGLI* |
| Ga0163110_115147492 | 3300012928 | Surface Seawater | MTKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV* |
| Ga0163109_100185966 | 3300012936 | Surface Seawater | MIKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYE* |
| Ga0163180_111884842 | 3300012952 | Seawater | MIKKKTLKERIEEAKKRNLLTLLQIFDIIITNKGEKHYV* |
| Ga0163111_102859254 | 3300012954 | Surface Seawater | MHGISVLYVYMIKKKTLKERIEDAKKRNLLTLLQIFDIIINNKGEKHYV* |
| Ga0163111_117363113 | 3300012954 | Surface Seawater | CFMHGTSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTNKGEKHYV* |
| Ga0116834_10943363 | 3300013188 | Marine | TMVYYVYMIKKKTLKERIEEAKKRNYLTLLQIFDILINNKGEKHYE* |
| Ga0116815_10714762 | 3300013195 | Marine | MIKKKTLKERIEEAKKRNYLTLLQIFDIIINNKGEKHYE* |
| Ga0181401_10175404 | 3300017727 | Seawater | MKKDKKTLKQRILEAKQRNCLTLLQIFDILLLTNNKGEQHYV |
| Ga0181401_11390082 | 3300017727 | Seawater | MHETMVYYVYMTKKKTLQERIEDAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0181417_10253581 | 3300017730 | Seawater | SVLYVYMIKKKTLQERIEDAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0187222_10635402 | 3300017734 | Seawater | MVDSVLYVYMIKKKTLKEKIKEAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0181402_11160191 | 3300017743 | Seawater | SVLYVYMIKKKTLKKRIEDAKKRNYLTLLQIFDIIITNKGEKHYV |
| Ga0181409_11948061 | 3300017758 | Seawater | FKKSAKKRKKCLLSMVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0181414_11639891 | 3300017759 | Seawater | MVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQIFDIIITNKGEK |
| Ga0187221_10205274 | 3300017769 | Seawater | MVDSVLYVYMIKKKTLKEKIKEAKKRNLLTLLQIFDIIITNKGEKHYV |
| Ga0181380_10138107 | 3300017782 | Seawater | MHGISVLYVYMIKKKTLKERIEDAKKRNYLTLLQIFDIILTNKGEKHYV |
| Ga0181565_100749443 | 3300017818 | Salt Marsh | MIKKKTLKERIEEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0181552_103875293 | 3300017824 | Salt Marsh | MIKKKTLKERIDEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0181552_104617632 | 3300017824 | Salt Marsh | MVDSVLYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0181577_107049383 | 3300017951 | Salt Marsh | MIKKKTLQERIEEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0181583_102839402 | 3300017952 | Salt Marsh | MIKKNTLKQRIEDAKKRNYLTLLQIFGIIITNNERTTI |
| Ga0181580_102321655 | 3300017956 | Salt Marsh | MIGYTHMIKKKTLKQRIEDAKKRNYLTLLQIFGIIITNNERTTI |
| Ga0181580_110426581 | 3300017956 | Salt Marsh | MKKTLKQRIEEARKRNYLTLLQIFDILILNNKGEKHYV |
| Ga0181581_102057192 | 3300017962 | Salt Marsh | MIKKKTLKQRIEDAKKRNYLTLLQIFGIIITNNERTTI |
| Ga0181589_101397314 | 3300017964 | Salt Marsh | MIKKMTLKERIEKAKKRNYLTLLQIFDIILNNNERTNTYE |
| Ga0181553_106905391 | 3300018416 | Salt Marsh | MKTLKQRIKEARRRNYLTLLQIFDIIMYNKGEKHY |
| Ga0181558_100409506 | 3300018417 | Salt Marsh | MVYYVYMIKKKTLQERIEEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0181591_107165472 | 3300018424 | Salt Marsh | MIGYTHMIKKKTLKQRIEDAKKRNYLTLLQIFGIIITNNE |
| Ga0181591_110147111 | 3300018424 | Salt Marsh | XYYNSMKTLKQRIKEARRRNYLTLLQIFDIIMYNKGEKHYV |
| Ga0181568_106984182 | 3300018428 | Salt Marsh | MHETMVYYVYMIKKKTLQERIENAKKRNYLTLLQILDILLTNNKKGLI |
| Ga0206124_100815903 | 3300020175 | Seawater | MIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE |
| Ga0181604_101437274 | 3300020191 | Salt Marsh | MKTLKQRIKEARRRNYLTLLQIFDIIMYNKGEKHYV |
| Ga0211529_10364553 | 3300020258 | Marine | MVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLNEKGEKHYV |
| Ga0211529_10767551 | 3300020258 | Marine | KKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0211648_10533073 | 3300020267 | Marine | MRGTSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTNNKKGLI |
| Ga0211484_10620731 | 3300020269 | Marine | MRGTSVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLNKKGQYYVKN |
| Ga0211520_10428952 | 3300020294 | Marine | MPGMIVYMYMIKKKTLTERIEDAKKRNLLTLLQIFDILINNKGEKHYG |
| Ga0211650_10429653 | 3300020301 | Marine | MHRISVLYVYMIKKKTLQERIEDAKKRNYLTLLQILDILLTNNKKGLI |
| Ga0211507_10707392 | 3300020325 | Marine | MVDSVLYVYMIKKKTLQERIEDAKKRNYLTLLQILDIILNNKGEKHYV |
| Ga0211510_10488071 | 3300020336 | Marine | FKKSAKKRKKCLLSMVDSVLYVYMIKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV |
| Ga0211506_10636943 | 3300020365 | Marine | MVDSVLYVYMIKKKTLQERIENAKKRNYLTLLQILDIILNNKGEKHYV |
| Ga0211477_101055803 | 3300020374 | Marine | MIKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV |
| Ga0211652_100884461 | 3300020379 | Marine | ACFYCGTSVLYVYMIKKKTLKERIEDAKKRNLLTLLQIFDIIITNKGEKHYV |
| Ga0211659_102052502 | 3300020404 | Marine | MHETMVYYVYMTKKKTLQERIEDAKKRNYLTLLQILDILLTNKGEK |
| Ga0211659_102139932 | 3300020404 | Marine | MTKKKTLKERIEIARKRMFLTLLDTLSIIITNKGEKHYV |
| Ga0211472_100736862 | 3300020409 | Marine | MVDSVLYVYIMIKKTLTERIEEAKKRNYLTLLDILDILLNKKGQYYVKN |
| Ga0211523_102223053 | 3300020414 | Marine | MHGISVLYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0211644_100515623 | 3300020416 | Marine | MTKKKTLKERIEEAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0211653_100379621 | 3300020421 | Marine | MHETMVYYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0211708_102014132 | 3300020436 | Marine | MHGISVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTDNKKGLI |
| Ga0211708_104155861 | 3300020436 | Marine | MIKKTLKERIEEAKKRNYLTLLQILDILLNEKGEKHYVKN |
| Ga0211539_100704234 | 3300020437 | Marine | MIKKKTLQERLKDAKKRNLLTLLDLFDIIINNKKGLI |
| Ga0211518_102870974 | 3300020440 | Marine | KKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV |
| Ga0211548_104722353 | 3300020454 | Marine | SVLYVYMIKKKTLKERIEEAKKRNLLTLLQIFDIIITNKGEKHYV |
| Ga0211577_100970425 | 3300020469 | Marine | MHGTSVLYVYMIKKKTLKERIEDAKKRNYLTLLQIFDIILTNKGEKHYV |
| Ga0211543_100523531 | 3300020470 | Marine | MIKKTLKERIELAKKRNYLTLLQILDILLTNKGEKHYG |
| Ga0213862_103285551 | 3300021347 | Seawater | THGTMVYYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0213858_1000070416 | 3300021356 | Seawater | MHETMVYYVYMIKKKTLQERIEDAKKRNLLTLLQILDILLNNKGEKHYV |
| Ga0213858_103642913 | 3300021356 | Seawater | GYTHMIKKKTLKQRIEDAKKRNYLTLLQIFGIIITNNERTTI |
| Ga0213859_100717781 | 3300021364 | Seawater | MIKKKTLKQRIEDAKKRNYLTLLQIFGIIFNNNNERTTI |
| Ga0213864_105342651 | 3300021379 | Seawater | MIKKKTLKQRIEDAKKRNYLTLLQIFGIIITNNERT |
| Ga0222717_1000058542 | 3300021957 | Estuarine Water | MVYYVYMIKKKTLKEKIDEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0222717_104400411 | 3300021957 | Estuarine Water | MKKDKKTLKQRIEEAKQRNMLTLLHIFDIIINNKGEKHYV |
| Ga0222718_1000250116 | 3300021958 | Estuarine Water | MIKKKTLKEKIDEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0222716_104341624 | 3300021959 | Estuarine Water | MKKDKKTLKQRIEEAKKRNYLTLLQIFDIILTYNNKGEKHYG |
| Ga0222716_105745671 | 3300021959 | Estuarine Water | NKKTLKEKIEEAKKRNYLTLLQLFDTILTYNKGEQHYVKS |
| Ga0224906_11006822 | 3300022074 | Seawater | MIKKKTLKERIIEAKKRNYLTLLQIFDIIITNKGEKHYV |
| Ga0196899_10348621 | 3300022187 | Aqueous | FLIGYTHMIKKKTLKQRIEDAKKRNYLTLLQIFDIILNNNERTNTYE |
| Ga0255773_101930812 | 3300022925 | Salt Marsh | MKTLKQRIKEARKRNYLTLLQIFDIIMYNKGEKHYV |
| Ga0255773_102115054 | 3300022925 | Salt Marsh | YNSMKTLKQRIKEARKRNYLTLLQIFDIIMYNKGEKHYV |
| Ga0255770_100382659 | 3300022937 | Salt Marsh | MIKKKTLKQRIEDAKKRNYLTLLQIFGIIFNNNERTNTYE |
| Ga0255762_105190903 | 3300023119 | Salt Marsh | KSACFTHGTMVYYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIIINNKGEKHYE |
| Ga0255762_105288891 | 3300023119 | Salt Marsh | MVYYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIIINNKGE |
| Ga0255761_1006014610 | 3300023170 | Salt Marsh | KTLKQRIKEARRRNYLTLLQLFDILIINKGEKHYV |
| Ga0255763_10823895 | 3300023273 | Salt Marsh | NSMKTLKQRIKEARRRNYLTLLQIFDIIMYNKGEKHYV |
| Ga0209535_10027909 | 3300025120 | Marine | MHETSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDILTTNKGEKHYV |
| Ga0209336_101172003 | 3300025137 | Marine | MIKKKTLIEKIKEAKRRNCLTLLQIFDIIITNKGEKHYE |
| Ga0209653_10066767 | 3300025695 | Marine | MDKTLKQKVQEARQKNYLTLLQIFDILMINKGEKHYV |
| Ga0208899_10311888 | 3300025759 | Aqueous | MIKKKTLKQRIEDAKKRNYLTLLQIFDIILNNNERTNTYE |
| Ga0209193_10569683 | 3300025816 | Pelagic Marine | MVVSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGE |
| Ga0209193_10727483 | 3300025816 | Pelagic Marine | SMVDSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE |
| Ga0209630_100124439 | 3300025892 | Pelagic Marine | MVDSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE |
| Ga0209425_102145681 | 3300025897 | Pelagic Marine | LLSMVDSVLYVYMIKKKTLKERIEEAKKRNYLTLLQIFDIILTNKGEKHYE |
| Ga0209951_10193816 | 3300026138 | Pond Water | MYIMKKDKKTLKQRIEEAKQRNMLTLLHIFDIIINNKGEKHY |
| Ga0209932_10156316 | 3300026183 | Pond Water | MYIMKKDKKTLKQRIEEAKQRNMLTLLHIFDIIINNKGEKHYV |
| Ga0207993_100795611 | 3300026270 | Marine | MRGFSVIYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0209359_102920563 | 3300027830 | Marine | MHGISVLYVYMIKKKTLKERIEDAKKRNYLTLLQILDILLTNKGEKHYV |
| Ga0209404_100545234 | 3300027906 | Marine | MHGTSVLYVYMIKKKTLKERIEEAKKRNYLTLLQILDILITNKGEKHYV |
| Ga0228639_11624791 | 3300028397 | Seawater | VYMIKKKTLKERIIEAKKRNYLTLLQIFDIIITNKGEKHYV |
| Ga0183826_10623273 | 3300029792 | Marine | MRGTSVLYVYMIKKKTLQERIEDAKKRNLLTLLQIFDIIINNKGEKHYV |
| Ga0315331_103780201 | 3300031774 | Seawater | MIKKKTLKERIKDAKKRNYLTLLQIFDIIITNKGEKHYV |
| Ga0315330_100385856 | 3300032047 | Seawater | MVDSVLYVYMIKKKTLKERIEDAKKRNYLTLLQIFDIIITNKGEKHYV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |