Metagenome / Metatranscriptome Family F065224

Basic Information
Family ID	F065224
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	88 residues
Representative Sequence	LQAEDVFREANESIAAKARELRMEPPIPFLCECSDKRCFARIPLTIDEYEEARAGPQRYLTTSGHQVDGALVIAQDERFALAEKL
Number of Associated Samples	98
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	1.56 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Most Common Taxonomy
Group	Unclassified (95.312 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (48.438 % of family members)
Environment Ontology (ENVO)	Unclassified (45.312 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.406 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.12% β-sheet: 22.12% Coil/Unstructured: 55.75%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
d.92.1.2: Thermolysin-like	d4n4ee_	4n4e	0.52963
a.25.1.0: automated matches	d5uwza_	5uwz	0.52885
d.92.1.2: Thermolysin-like	d1u4ga_	1u4g	0.52246
d.58.29.1: Adenylyl and guanylyl cyclase catalytic domain	d1azsa_	1azs	0.5197
e.7.1.1: Inositol monophosphatase/fructose-1,6-bisphosphatase-like	d1jp4a_	1jp4	0.51521

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02518	HATPase_c	15.62
PF10002	DUF2243	1.56
PF00027	cNMP_binding	1.56
PF01957	NfeD	1.56
PF01230	HIT	0.78
PF00274	Glycolytic	0.78
PF02653	BPD_transp_2	0.78
PF08240	ADH_N	0.78
PF13480	Acetyltransf_6	0.78
PF13649	Methyltransf_25	0.78
PF00990	GGDEF	0.78
PF03631	Virul_fac_BrkB	0.78
PF08448	PAS_4	0.78
PF05988	DUF899	0.78
PF08031	BBE	0.78
PF00005	ABC_tran	0.78
PF00535	Glycos_transf_2	0.78
PF03167	UDG	0.78
PF05977	MFS_3	0.78
PF00107	ADH_zinc_N	0.78
PF08281	Sigma70_r4_2	0.78
PF04471	Mrr_cat	0.78
PF07295	DUF1451	0.78
PF07011	Elf4	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.78
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.78
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.78
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.78
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.78
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.78

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
All Organisms	root	All Organisms	4.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
cellular organisms	root	All Organisms → cellular organisms	4.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.12 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005184\|Ga0066671_10211824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300012200\|Ga0137382_10031666	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300015371\|Ga0132258_10263060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4223	Open in IMG/M
3300018433\|Ga0066667_10914745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300028787\|Ga0307323_10013180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2782	Open in IMG/M
3300031938\|Ga0308175_100066150	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.19%
Host-Associated	Host-Associated	7.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.59%
Aquatic	Environmental → Aquatic	8.59%
Plants	Host-Associated → Plants	7.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.03%
Sediment	Environmental → Aquatic → Sediment	7.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Loam	Environmental → Terrestrial → Soil → Loam	2.34%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	48.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_10456910	2124908045	Soil	VTLAEDVFRDANERIAEQALEFKLEQPIPFLCECSDKRCFARLFLMLGEYEDARSDPEQYLTVAGHEVTGAMVIAEGTGFVLAEKI
ICCgaii200_07526732	2228664021	Soil	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIEEYDEARAEPQRYLTSSGHQVDGALVVAQEERFALAEKR
ARcpr5oldR_0064471	3300000041	Arabidopsis Rhizosphere	VQPEDMFRKANESIAAKARELDMESPIPFLCECSDIRCLERVPLSVEEYDEARAAPQRYLTMTGHEVDGAFVIEQDGHFALVEKL*
ICChiseqgaiiFebDRAFT_108272441	3300000363	Soil	LKIEEVFRKANESIAAKAREIDMASPIPFLCECSDRRCLGRVPLSLEEYDEARAAPQRYLTMAGHEVEGAFLVEQDGHFVLVEKR*
F24TB_116862262	3300000550	Soil	VTLAEDVFRDANERIAEQALEFKLEQPIPFLCECSDRRCFARLFLMLGEYEDARSDPEQYLTVAGHEVTGAMVIAEGTGFVLAEKI*
F14TC_1046724982	3300000559	Soil	VQPEDMFRKANERIAAKARELGMESTIPFLCECSDIRCLGRIPLSIEEYDEARVAPQRYLTMAGHEVEGALVIEQDENFALAEKL*
JGI11643J12802_106823091	3300000890	Soil	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIEEYDEARAEPQRYLTSSGHQVDGALVVAQEERFALAEKR*
JGI10214J12806_110485703	3300000891	Soil	VQTEDVFREANERIAGKADELNLQPPIPFLCECSDEHCFVRLFLSLEEYAEVRSDPQRYLIISGHDVAGGRRASSPRSTTTYRPD*
JGI11615J12901_110564332	3300000953	Soil	VQAEDVFRKANERIAAKARELGMDSPIPFLCECSDRCCLGRVPLLIEEYVEARAAPQRYVTMAGHEVEGAFVIEQDENFALAEKL*
JGI10216J12902_1077873042	3300000956	Soil	LKIEEVFRKANESIAAKAREIDMASPIPFLCECSDRRCLGRVPLSLEEYDEARAAPQRYLTIAGHEVEGAFVIEQDENFALAEKL*
JGI10216J12902_1095107522	3300000956	Soil	VQPEDVFRKANESIAAKARELNMEAPIPFLCECSDTRCLGRVPLSIEEYDEARAAPQRYLTIAGHEVEGAFVIEQDANFALAEKL*
F14TB_1013867251	3300001431	Soil	MEAGRCSQDVFRKANERIAAKARELGMDSPIPFLCECSDRRCLGRVPLLIEEYGEARAAPQRYVTMAGHEVEGAFVIEQDANFALAEKL*
Ga0062593_1002193904	3300004114	Soil	ARTEQVWRPTVKVEEVFRTANENIAAKARELRMEPPIPFLCECSNKRCFARVPLTIDEYEEVRAAPARYVTISGHEVEGAFVIAQEDRFALAEKL*
Ga0062593_1008650302	3300004114	Soil	VQPEDWFRKANERIAAKARELGMDSPIPFLCECSDKRCLGRVPLSIEEYDEARAAPQRYLTMAGHEVEGAFVIEQDENFALAEKL*
Ga0062593_1017352982	3300004114	Soil	MLAEDVFREANEHISETARELELAWPIPFVCECSDTRCFAHLFLGLAEYDEARADPERYLTVAGHEVEGAMVIASDERFALAEKI*
Ga0066671_102118241	3300005184	Soil	MQPEDVFREANQHIAEKARELELQQPIPFLCECSDKGCFAHLLLTLERYAQARADPRRYLTVAGHEVEGAVVIAKDKRFNLAEKP*
Ga0066705_103432313	3300005569	Soil	MSSEWAWALKQVQMGGFDRVQTEDVFREANEQIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVASHERFALTEKI*
Ga0066708_102868082	3300005576	Soil	MGGFDRVQTEDVFREANEQIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVASHERFALTEKI*
Ga0066656_106338272	3300006034	Soil	MGGFDRVQTEDVFREANEHIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVASHERFALTEKI*
Ga0075431_1005755752	3300006847	Populus Rhizosphere	VQPEDMFRNANERIAAKARELGMDSPIPFLCECSDRRCLGHVPLSIEEYDEARAAPQRYVTIAGHEVEGAFVIEQDENFALAEKL*
Ga0075433_104858241	3300006852	Populus Rhizosphere	VQPEDMFRNANERIAAKARELGMDSPIPFLCECSDRRCLGHVPLSIEEYDEARAAPQRYVTIAGHEVEGAFV
Ga0075425_1010290022	3300006854	Populus Rhizosphere	VQPEDMFRKANESIAAKARELDMESPIPFLCECSDIRCLERVPLSVEEYDEARAAPQRYLTMSGHEVDGAFVIQQDGHFALVEKL*
Ga0075424_1020540822	3300006904	Populus Rhizosphere	VQPEDMFRNANERIAAKARELGMDSPIPFLCECSDRRCLGHVPLSIEEYDEARAAPQRYVTIAGHEVEGAFVIEQDENFAL
Ga0075418_104648983	3300009100	Populus Rhizosphere	MFRNANERIAAKARELGMDSPIPFLCECSDRRCLGHVPLSIEEYDEARAAPQRYVTIAGHEVEGAFVIEQDENFALAEKL*
Ga0066709_1005452211	3300009137	Grasslands Soil	MQTEDVFREANEQIAEKAHELELQQPIPFLCACSDKRCFAHIFLTLEQYAEARAGPAFYMTIAGHEVVGAVVVASHERFALTEKI*
Ga0075423_111007261	3300009162	Populus Rhizosphere	GDGKGVRTHTRVGSRAVQPEDMFRKANESIAAKARELDMESPIPFLCECSDIRCLERVPLSVEEYDEARAAPQRYLTMSGHEVDGAFVIQQDGHFALVEKL*
Ga0126307_100067625	3300009789	Serpentine Soil	LQTEDVFREANESIAAKARELQMEPPIPFLCECSDKRCFERIPLTIDEYEEARSAPQRYLTSSGHQVDGALVIAQDDRFALAEKI*
Ga0126307_100524022	3300009789	Serpentine Soil	LQAEDIFREANIKIAEKARELQMEPPIPFLCECTNKRCFARLHLTLEDYEEARSDPQRYLTITGHEVSGAVVIAQNDRFALAEKL*
Ga0126307_114335732	3300009789	Serpentine Soil	LQPEDIFREANIKIAEKARELQMEPPIPFLCECSSKRCFARLDLTLEDYEEARSDPQRYLTITGHEVSGAIVIAQNDRFSLAEKL*
Ga0126313_100285562	3300009840	Serpentine Soil	LQPEDIFREANIKIAEKARELQMEPPIPFLCECTNKRCFARLHLTLEDYEEARSDPQRYLTITGHEVSGAVVIAQNDRFALAEKL*
Ga0126313_105821601	3300009840	Serpentine Soil	LEAEDFFRAANEKIAEKARELRMQPPIPFLCECSNKRCFARLHLILEEYEEARSDPQRYLTAAGHEVSGAIVIAQNDRFALAEKL*
Ga0126305_100079532	3300010036	Serpentine Soil	LQTEDVFREANESIAAKARELQMEPPIPFLCECSDRRCFERIPLTIDEYEDARSAPQRYLTSSGHQVDGALVIAQDDRFALAEKI*
Ga0126309_100156602	3300010039	Serpentine Soil	LKTEDVFREANESIAAKARELGMEPPIPFLCECSDRNCFGRISLTIDEYEEARAGPQRYLTTSGHQVDGAQVIVQDERFALAEKL*
Ga0126308_100036434	3300010040	Serpentine Soil	LETEDVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYEEARAEPQRYLTTSGHRVDGALIIAQDEHFALAEKR*
Ga0126308_100070469	3300010040	Serpentine Soil	LQVEDIFREANVRIAEKARELQMEPPIPFLCECSNKRCLARLHLTLKEYEEARSDPRRYLTITGHEVSGAVVIAQNDHFSLAEKL*
Ga0126308_111354211	3300010040	Serpentine Soil	LQPEDIFREANIKIAEKARELQMEPPIPFLCECSNKRCFARLHLTLEDYEEARSDPQRYLTITGHEVLGAIVIAQNDRFALAEKF*
Ga0138505_1000556542	3300010999	Soil	QHGGGAVQPEDVFRKANESIAAKAREIGMESLIPFLCECSDTSCLGRVPLSIEEYEEARAAPQRYLTIAGHEVEGAFVIEQDENFALAEKF*
Ga0120139_12050821	3300012019	Permafrost	VQAEDVFREANERIAEKARELELEQPIPFLCECSDRRCFAHIFLTLELYEEARADSQRYLTIASHEVVGAVVIAKDDRFALAQKLEAACRR*
Ga0137364_100859075	3300012198	Vadose Zone Soil	MGGFDPVQTEDVFREANEHIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVASHEHFALTEKI*
Ga0137382_100316664	3300012200	Vadose Zone Soil	VQTEDVFREANEHIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVASHERFALTEKI*
Ga0137376_115582731	3300012208	Vadose Zone Soil	MGMRFETGANGGFRPMQAEDVFREANEQIAAKARELELQQPIPFLCECSDKRCFAHIFLTLEQYAEARAGPAYYATITGHEVVGAVVVASHERFALTE*
Ga0137376_116207282	3300012208	Vadose Zone Soil	LQAEDVFREANESIAAKARELRMEPPIPFLCECSDKRCFARIPLTIDEYEEARAGPQRYLTTSGHQVDGALVIAQDERFALAEKL*
Ga0137377_102955702	3300012211	Vadose Zone Soil	MGGFDRVQTEDVFREANEHIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGAVVVACYEGFALTEKI*
Ga0137366_107446991	3300012354	Vadose Zone Soil	VQAEDVFREANERIAEKARELELQQPIPLLCECSNKRCFLHMFLTLEQYGEARADPQRYLTIAGHEVEGAIVIAKDDRFALAEKDLARLRGFP*
Ga0137371_112320212	3300012356	Vadose Zone Soil	EQIAAKARELELQQPIPFLCECSDKRCFAHIFLALEQYEEARAGPAFYVTIAGHEVVGAVVVASHERFALTEKI*
Ga0137407_109740191	3300012930	Vadose Zone Soil	VQVEDVVREANDRIAEKARELGLEQPIPFLCECSDQRCFADIFLALERYEEARAGSRRYLTIVGHEVVGAVVIAKYDRFALAEKL*
Ga0162653_1000087171	3300012937	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDQARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKF*
Ga0164303_111279671	3300012957	Soil	LGVEDVFREANESIAAKARELRMEPPIPFLCECSDRHCFARIPLTIDEYDEARAGPQRYLTTSAHRVDGALVIAQDEHFALAEKR*
Ga0164306_109335542	3300012988	Soil	LGVEDVFREANESIAAKARELRMEPPIPFLCECSDRHCFARIPLTIDEYDEARAGPQRYLTTSAHRVDGALVIAQDEHFA
Ga0120123_10751972	3300013770	Permafrost	VQAEDVFREANERIAEKARELELEQPIPFLCECSDRRCFAHIFLTLELYEEVRADSQRYLTIASHEVVGAVVIAKDDRFALAQKLEAACRR*
Ga0132258_102630602	3300015371	Arabidopsis Rhizosphere	MFRKANESIAAKARELDMESPIPFLCECSDIRCLERVPLSVEEYDEARAAPQRYLTMTGHEVDGAFVIEQDGHFALVEKL*
Ga0132256_1006376471	3300015372	Arabidopsis Rhizosphere	VTLAEDVFRDANERIAEKALEFELEQPIPFLCECSDRRCFDRLFLMLGDYEDVRSDPEQYLTVAGHEVIGAMVIAEGTGFVLAEKI*
Ga0184604_100448931	3300018000	Groundwater Sediment	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0184608_100139202	3300018028	Groundwater Sediment	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0184620_100012512	3300018051	Groundwater Sediment	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPKRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0184619_101357552	3300018061	Groundwater Sediment	MPPEDVFREANEEIAEKARELELQQPIPFLCECSDKRCFAHVFLTLEQYADARSDPQRYLTIAGHEVVGAMVIAKHDRFALAEKI
Ga0184619_103789462	3300018061	Groundwater Sediment	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENF
Ga0184617_10071212	3300018066	Groundwater Sediment	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPQRYLTSSGHQVEGASVIAQGERFALAEKR
Ga0184635_103421891	3300018072	Groundwater Sediment	MPLPSEDAGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0184640_102393541	3300018074	Groundwater Sediment	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0184609_101634801	3300018076	Groundwater Sediment	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVD
Ga0184625_102601232	3300018081	Groundwater Sediment	MPLPTEDAGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLMISSHEVVGAFVIAQDERFALAEKL
Ga0066667_109147452	3300018433	Grasslands Soil	MGGFDRVQTEDVFREANEQIAEKARKLELQQPIPFLCECSDKRCFAHLFLDPEEYEEARSDPRRYLTIAGHEVVGATVVASDDRFALVEKI
Ga0193704_10073511	3300019867	Soil	NVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0193704_10429883	3300019867	Soil	GLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0193728_10067312	3300019890	Soil	MGVSSDMPPEDVFREANEEIAEKARELELQQPIPFLCECSDKRCFAHVFLTLEQYADARSDPQRYLTIAGHEVVGAMVIAKHDRFALAEKI
Ga0193730_10022261	3300020002	Soil	TGVTSDMPPEDVFREANEEIAEKARELELQQPIPFLCECSDKRCFAHVFLTLEQYADARSDPQRYLTIAGHEVVGAMVIAKHDRFALAEKI
Ga0193745_10829622	3300020059	Soil	TRNGRGDALLTDALRRPEGLETEDVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPQRYLTTSGHHVDGALVIAQDEHFALAEKL
Ga0210381_101838331	3300021078	Groundwater Sediment	VYCFRDGKASKTQQVWRPQAVQPEDIFRSANESIAAKARELRMEPPIPFLCECSNKRCFARIWLTVEAYDEARAAPQRYLTVAGHEVEGAFVIAHNERFALAEKL
Ga0193719_100929322	3300021344	Soil	SLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0193750_10150233	3300021413	Soil	LRPENIFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYEQARAGPQRYLTTSGHQVEGAQVIVQEARFALAEKL
Ga0209807_11066961	3300026530	Soil	MGGFDRVQTEDVFREANEQIAEKARKLELQQPIPFLCECSDKRCFAHLFLILEQYEEARSDPRRYLTIAGHEVVGATVVASDDRFALVEKI
Ga0209382_119504262	3300027909	Populus Rhizosphere	MFRKANESIAAKAREVGMESPIPFLCECSDTRCLGRVPLSIEAYGEARAAPQRYVTMAGHEVEGAFVIEQDENFALAEKL
Ga0307276_100923172	3300028705	Soil	VQAEDVFREANERIAEKARELELQQPIPFLCECSNKSCFVHMLLTDEQYEEARADPRRYLTIPGHEVEGAIVIAKDDRFALAEKI
Ga0307295_100813193	3300028708	Soil	GMPLPTEDAGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAENL
Ga0307295_101464751	3300028708	Soil	LTRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307279_100915872	3300028709	Soil	VQTEDVFREANERIAEKALELELQQPIPFLCECSNKRCFVHMLLTLEQYAEARADPQRYLIIAGHEVEGAIVIAKDDRFALAEKI
Ga0307293_1000045212	3300028711	Soil	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307293_103098901	3300028711	Soil	QHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307285_100513722	3300028712	Soil	RGCAFLRGDRRLTRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307285_101013262	3300028712	Soil	MPLPTEDAGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0307311_102777922	3300028716	Soil	KASKKGRASETRQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307307_100489472	3300028718	Soil	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIEEYDEARARPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307301_100035097	3300028719	Soil	LKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307301_100875373	3300028719	Soil	RGFKASKKGRASETRQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307317_101563271	3300028720	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVI
Ga0307315_101268312	3300028721	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTTAGHEVEGAFVIEQDENFALAEKL
Ga0307315_102094701	3300028721	Soil	AFLRGDRRLTRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307319_102528051	3300028722	Soil	QGVYCFRDGKASKTQQVWRPQAVQPEDIFRSANESIAAKARELRMEPPIPFLCECSNKRCFARIWLTVEAYDEARAAPQRYLTVAGHEVEGAFVIAHNERFALAEKL
Ga0307318_102360631	3300028744	Soil	TRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307316_101465242	3300028755	Soil	QSTHTRRRTGLKTEDVFREANESIAAKARELRMEPPIPFLCECSDRGCFARIPLTIDEYDEARAGPQRYLTASGHQVDGAQVIAQGERFALAEKP
Ga0307316_103497181	3300028755	Soil	RAPTGTFSDYNTPLARGFKASKKGRPSETRQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEK
Ga0307320_100118871	3300028771	Soil	RWSQPTAEAESLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307320_103688992	3300028771	Soil	ESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0307288_103608691	3300028778	Soil	SETPQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVGPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307288_103785601	3300028778	Soil	ENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307282_102674162	3300028784	Soil	VQAEDVFREANERIAEKARELELQQPIPFLCECSNKRCFMHMLLTLEQYGGARADPQRYLTIAGHEVEGAIVIAKDDRFALAEKI
Ga0307323_100131803	3300028787	Soil	LPWRWTRKGEDAPSYEETGGPTRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307323_100387935	3300028787	Soil	LPSEDTGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0307323_100699123	3300028787	Soil	QHVGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307290_101404181	3300028791	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQ
Ga0307287_100043365	3300028796	Soil	EDIFRSANESIAAKARELRMEPPIPFLCECSNKRCFARIWLTVEAYDEARAAPQRYLTVAGHEVEGAFVIAHNERFALAEKL
Ga0307287_100112936	3300028796	Soil	MPLPSDAGGLTQLKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0307287_101264823	3300028796	Soil	GRPSETRQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307284_102441731	3300028799	Soil	SLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0307294_100116451	3300028810	Soil	LKTEDVFREANESIAAKARELRMEPPIPFLCECSDRGCFARIPLTIDEYDEARAGPQRYLTASGHQVDGAQVIAQGERFA
Ga0307294_100729983	3300028810	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVE
Ga0307292_104802741	3300028811	Soil	LKTEDVFREANERIAEKARELQMQPPIPFLCECSDKRCLGRLHLTLAEYGEARSDPQRYLTISSHEVVGAFVIAQDERFALAEKL
Ga0307302_100910242	3300028814	Soil	LKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIAD
Ga0307302_102721481	3300028814	Soil	PLARGFKASKKGRPSETRQHGGGAVQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307296_100172503	3300028819	Soil	VALDKEGRGCAFLRGDRRLTRLKTEDVFREANERIAEKARDLQMQPPIPFLCECSDKRCLGRVSLTIEEYDEARAAPQRYLTISGHEVKGAFVIADDEGSALAEKL
Ga0307296_100677751	3300028819	Soil	EDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFALAEKL
Ga0307310_102603021	3300028824	Soil	AESLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307312_103234292	3300028828	Soil	QRMGVSSDMPPEDVFREANEEIAEKARELELQQPIPFLCECSDKRCFAHVFLTLEQYADARSDPQRYLTIAGHEVVGAMVIAKHDRFALAEKI
Ga0307312_103953382	3300028828	Soil	VFREANERIAEKALELELQQPIPFLCECSNKRCFVHMLLTLEQYAEARADPQRYLIIAGHEVEGAIVIAKDDRFALAEKI
Ga0307314_100856882	3300028872	Soil	GVYCFRYGKATETREVWRPEAVQPEDVFRSANESIATKARELRMEPPIPFLCECSNKRCFARLFLTIEEYDEARAAPQRYLTILGHEVEGAFVVVQEERFALAEKL
Ga0307314_103163842	3300028872	Soil	LETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFA
Ga0307289_101411362	3300028875	Soil	EAESLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0307286_100539652	3300028876	Soil	LETEDVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0307286_101899742	3300028876	Soil	PEDVFRSANESIATKARELRMEPPIPFLCECSNKRCFARLFLTIEEYDEARAAPQRYLTILGHEVEGAFVVVQEERFALAEKL
Ga0307278_100003456	3300028878	Soil	LETEDVFREANESIAAKARELHMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPQRYLTTSGHRVDGALVVAQDERFALAEKR
Ga0307277_100385763	3300028881	Soil	VQPEDVFREANERIAEKARELDLQQPVPFLCECSNKSCFVHMLLTDEQYEEARADPQRYLTIAGHEVEGAIVIAKDDRFALAEKI
Ga0307304_101647571	3300028885	Soil	VQPEDVFRKANESIAAKARELNMESPIPFLCECSDTRCLGRVPLSIEEYDEARVAPQRYLTIAGHEVEGAFVIEQDENFAL
Ga0308201_102394811	3300031091	Soil	NVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLSIDEYDEARAEPQRYLTSSGHQVDGALVVAQDERFALAEKR
Ga0308204_101935291	3300031092	Soil	TDPPRRPRSLQAEDVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPQRYLTTSGHRVDGALVIAQDEHFALAEKR
Ga0308204_102516532	3300031092	Soil	SQPTAEAESLETENVFREANESIAAKARELRMEPPIPFLCECSDRRCFARIPLTIDEYDEARAGPERYLTSSGHQVEGASVIAQGERFALAEKR
Ga0308175_1000661502	3300031938	Soil	VQPEDFFRSANESIAAKARELGMESPIPFLCECSDSRCLGRVPLSLAEYEEARAAPKRYVTMAGHEVDGAFVIEQEEHFALAEKL
Ga0308176_103223023	3300031996	Soil	VQPEDFFRSANESIAAKARELGMESPIPFLCECSDSRCLGRVPLSLAEYDEARAAPKRYVTMAGHEVDGAFVIEQEEHFALAEKL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign