Metagenome / Metatranscriptome Family F065186

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065186
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	58 residues
Representative Sequence	SSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Number of Associated Samples	104
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.94 %
% of genes near scaffold ends (potentially truncated)	91.41 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.531 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (28.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.031 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.40% β-sheet: 0.00% Coil/Unstructured: 50.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00149	Metallophos	8.59
PF04238	DUF420	4.69
PF13473	Cupredoxin_1	4.69
PF04542	Sigma70_r2	3.91
PF09990	DUF2231	2.34
PF00067	p450	1.56
PF00463	ICL	1.56
PF16338	AGL_N	1.56
PF12680	SnoaL_2	1.56
PF08281	Sigma70_r4_2	1.56
PF13490	zf-HC2	0.78
PF00326	Peptidase_S9	0.78
PF14310	Fn3-like	0.78
PF01047	MarR	0.78
PF13669	Glyoxalase_4	0.78
PF00483	NTP_transferase	0.78
PF02416	TatA_B_E	0.78
PF14534	DUF4440	0.78
PF13560	HTH_31	0.78
PF04909	Amidohydro_2	0.78
PF01594	AI-2E_transport	0.78
PF13517	FG-GAP_3	0.78
PF11154	DUF2934	0.78
PF03475	3-alpha	0.78
PF07885	Ion_trans_2	0.78
PF00106	adh_short	0.78
PF00756	Esterase	0.78
PF13191	AAA_16	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	4.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.91
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.91
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.91
COG2124	Cytochrome P450	Defense mechanisms [V]	1.56
COG2224	Isocitrate lyase	Energy production and conversion [C]	1.56
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.50 %
Unclassified	root	N/A	5.47 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.56 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.25 %
Unclassified	root	N/A	5.47 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.25 %
Unclassified	root	N/A	5.47 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.78 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.25 %
Unclassified	root	N/A	5.47 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.41 %
Unclassified	root	N/A	5.47 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.34 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.78 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.78 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.41 %
Unclassified	root	N/A	5.47 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.78 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.78 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.78 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig79524	Not Available	690	Open in IMG/M
2170459010\|GIO7OMY01CL6X3	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
2189573001\|GZR05M102JZ5NT	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300004082\|Ga0062384_100305814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	989	Open in IMG/M
3300004082\|Ga0062384_100373128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	911	Open in IMG/M
3300004091\|Ga0062387_101166683	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300004152\|Ga0062386_101661322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	533	Open in IMG/M
3300004156\|Ga0062589_100838325	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300004480\|Ga0062592_101085592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	739	Open in IMG/M
3300005437\|Ga0070710_10045821	All Organisms → cellular organisms → Bacteria → Acidobacteria	2433	Open in IMG/M
3300005438\|Ga0070701_10469190	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300005439\|Ga0070711_101026616	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300005457\|Ga0070662_101426544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005764\|Ga0066903_100445071	All Organisms → cellular organisms → Bacteria → Acidobacteria	2161	Open in IMG/M
3300005764\|Ga0066903_101915466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1136	Open in IMG/M
3300006086\|Ga0075019_10163826	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300006163\|Ga0070715_10031962	All Organisms → cellular organisms → Bacteria → Acidobacteria	2140	Open in IMG/M
3300006174\|Ga0075014_100323040	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300006237\|Ga0097621_102057463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300006871\|Ga0075434_101033944	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300006881\|Ga0068865_102116879	Not Available	512	Open in IMG/M
3300009038\|Ga0099829_11681551	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300009521\|Ga0116222_1306021	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009524\|Ga0116225_1073176	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300009547\|Ga0116136_1105912	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300009630\|Ga0116114_1129999	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300009646\|Ga0116132_1088018	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300009792\|Ga0126374_10771653	Not Available	731	Open in IMG/M
3300009824\|Ga0116219_10031662	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300010048\|Ga0126373_10168305	All Organisms → cellular organisms → Bacteria → Acidobacteria	2099	Open in IMG/M
3300010048\|Ga0126373_11009838	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300010048\|Ga0126373_12066734	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300010341\|Ga0074045_10119245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1812	Open in IMG/M
3300010343\|Ga0074044_10385756	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300010358\|Ga0126370_12211891	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010361\|Ga0126378_11571583	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010361\|Ga0126378_11631188	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300010361\|Ga0126378_12205867	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300010361\|Ga0126378_12286312	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300010376\|Ga0126381_100016636	All Organisms → cellular organisms → Bacteria	8488	Open in IMG/M
3300010376\|Ga0126381_100533116	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300010376\|Ga0126381_103535098	Not Available	613	Open in IMG/M
3300010376\|Ga0126381_104669765	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010379\|Ga0136449_102218102	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300011271\|Ga0137393_10698560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012089\|Ga0153924_1103424	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300012096\|Ga0137389_11271663	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300012923\|Ga0137359_10598666	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300012960\|Ga0164301_11449956	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012961\|Ga0164302_10791173	Not Available	715	Open in IMG/M
3300014155\|Ga0181524_10380530	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300014164\|Ga0181532_10478134	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300014638\|Ga0181536_10146942	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300015168\|Ga0167631_1008876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1484	Open in IMG/M
3300015371\|Ga0132258_11687925	All Organisms → cellular organisms → Bacteria → Acidobacteria	1598	Open in IMG/M
3300015371\|Ga0132258_13640854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300015371\|Ga0132258_13930942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1010	Open in IMG/M
3300015373\|Ga0132257_102303699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300016270\|Ga0182036_11432347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300016270\|Ga0182036_11642693	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300016319\|Ga0182033_11367029	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300016371\|Ga0182034_11334610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300016404\|Ga0182037_10110561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1998	Open in IMG/M
3300016404\|Ga0182037_10418902	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300016422\|Ga0182039_10101720	All Organisms → cellular organisms → Bacteria → Acidobacteria	2123	Open in IMG/M
3300016750\|Ga0181505_10856681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2073	Open in IMG/M
3300017823\|Ga0187818_10238929	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300017925\|Ga0187856_1152678	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300017938\|Ga0187854_10102062	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300018001\|Ga0187815_10224994	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300018013\|Ga0187873_1179709	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300020581\|Ga0210399_11152750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	618	Open in IMG/M
3300020583\|Ga0210401_11023259	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300020583\|Ga0210401_11589809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021086\|Ga0179596_10080222	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300021168\|Ga0210406_11012474	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300021171\|Ga0210405_10096293	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300021178\|Ga0210408_10165166	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300021404\|Ga0210389_10825810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300021405\|Ga0210387_11385417	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300021475\|Ga0210392_11495060	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300021478\|Ga0210402_10533075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300021478\|Ga0210402_10809074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300021560\|Ga0126371_10844075	Not Available	1061	Open in IMG/M
3300021560\|Ga0126371_11055525	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300021560\|Ga0126371_11063555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300022557\|Ga0212123_10686646	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300022901\|Ga0247788_1135023	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300025911\|Ga0207654_11037642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300025916\|Ga0207663_10870221	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300025922\|Ga0207646_10313121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1418	Open in IMG/M
3300026121\|Ga0207683_10934693	Not Available	805	Open in IMG/M
3300026551\|Ga0209648_10086895	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300027024\|Ga0207819_1026877	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300027383\|Ga0209213_1032282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300027545\|Ga0209008_1016424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1737	Open in IMG/M
3300027610\|Ga0209528_1076916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300027625\|Ga0208044_1094630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300027855\|Ga0209693_10255576	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300027908\|Ga0209006_11205415	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028047\|Ga0209526_10932361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300028906\|Ga0308309_11395789	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300030706\|Ga0310039_10076979	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300030916\|Ga0075386_11021659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300030969\|Ga0075394_11818025	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300031057\|Ga0170834_101085636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300031057\|Ga0170834_102621457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031057\|Ga0170834_109695806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300031231\|Ga0170824_102527234	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300031234\|Ga0302325_11297881	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300031561\|Ga0318528_10174311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300031573\|Ga0310915_10018529	All Organisms → cellular organisms → Bacteria	4193	Open in IMG/M
3300031708\|Ga0310686_103619711	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031719\|Ga0306917_10190110	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300031719\|Ga0306917_11367578	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031754\|Ga0307475_10192574	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300031771\|Ga0318546_10382326	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300031879\|Ga0306919_10940439	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031890\|Ga0306925_10955321	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300031903\|Ga0307407_11653271	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300031910\|Ga0306923_10079409	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300031910\|Ga0306923_10675395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300031910\|Ga0306923_11503705	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300031946\|Ga0310910_10367720	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300032035\|Ga0310911_10657928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300032160\|Ga0311301_11611719	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300033289\|Ga0310914_10786307	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300033289\|Ga0310914_11603636	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.84%
Host-Associated	Host-Associated	9.38%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	14.84%
Plants	Host-Associated → Plants	8.59%
Fungi	Host-Associated → Fungi	0.78%
Modeled	Engineered → Modeled	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.22%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.12%
Sediment	Environmental → Aquatic → Sediment	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Mycelium	Host-Associated → Fungi → Mycelium	0.78%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.78%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.78%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0524.00005190	2166559005	Simulated	IHSRAQGHPHKPLPNYRLPIEALAVLLVGLTGHLGGFLSGVNT
F62_09660340	2170459010	Grass Soil	VLIWFVFWIHFRVRRHPEESLPKYRLLIEAVAVFVVGLTGHLGGFLTGVNGPG
FD2_01061220	2189573001	Grass Soil	VLGCITSVRIWLXFWIHLRVRRHPEESLPKVPPAARSDRGVACGLTGHLGGFLSGVNGPG
Ga0062384_1003058141	3300004082	Bog Forest Soil	FWIHRRVRRHPEEPLPNYRLALEALAVGIVMLTGHLGGFLSGVNFPG*
Ga0062384_1003731282	3300004082	Bog Forest Soil	ALICLVFWIHRRARAREQSLPAYRLPLEAVAVLIVGLTGHLGGFLSGVNGQ*
Ga0062387_1011666832	3300004091	Bog Forest Soil	WLVFWIHWRARRRPEDSLPKFRLVIEAVAVLLVGLTSHLGGFLSGVNGPG*
Ga0062386_1016613221	3300004152	Bog Forest Soil	VSSALIWFVWWLHFRARRKPGHELPAYRLPIELFAAFVVGLTGHLGGFLSGVNGPG*
Ga0062589_1008383253	3300004156	Soil	LLMHLVVGVASSVLIWYVCWMHWRGRQTSAAASLPAYRLPLEAIGVLLVALTGHLGGFLTGVNAAG*
Ga0062592_1010855922	3300004480	Soil	MHLVLGCISSVLIWLVCWIHWRVRRHPAAPLPTYRLPIEAVAVLLVGLTAHLGGFFSGVNGPG*
Ga0070710_100458213	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHLVLGYITTVLIWLVFWIHLRVRRHPEVLAKVPPALEAIALLLMGLPGHLDGFLSGVNGPG*
Ga0070701_104691901	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LLGCISSVLICHVCWIHWRARRRPERSLPAYRLPIEAIAVLLVGLTGHLGGFLSGVSAPG
Ga0070711_1010266161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KLKGILLMHLIMGCVSTVLIWTVFAIHLRVRRHPERSLPDYRLPIEALAVLLVGLTGHLGGFLSGVNGPG*
Ga0070662_1014265441	3300005457	Corn Rhizosphere	LKGILLAHLILGCIVSALIWIVFRIHSQARHHEDKPLPTYRLPIEALAVLLVGLTAHLGGILSGVNG*
Ga0066903_1004450711	3300005764	Tropical Forest Soil	CLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG*
Ga0066903_1019154662	3300005764	Tropical Forest Soil	LVLGCASSALIWVVFLIHLRARRHPEGSLPKYCLPLDVVAVLLVGLTGHLGGFLSGVNGPG*
Ga0075019_101638262	3300006086	Watersheds	VLGCLSSALIWIVFWIHLRARRHLEVSLPKLGLLIEAVAVVLVGLTGHLGGVLSGVNGPG
Ga0070715_100319622	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHLVLGYITTVLIWLVFWIHLRVRRHPEEFAKVPPALEAIALLLMGLPGHLDGFLSGVNGPGESVEPSGE*
Ga0075014_1003230401	3300006174	Watersheds	SSVLIWFVFWVHFRVRRHPEESLQKYRLPIEAVAVFVVGLTGHLGGFLSGVNGPG*
Ga0097621_1020574632	3300006237	Miscanthus Rhizosphere	WIVFRIHSQARHHEDKALPTYRLPIEALAVLLVGLTAHLGGILSGVNG*
Ga0075434_1010339443	3300006871	Populus Rhizosphere	LMHLVQGCASSALIWFVLWIHWRAQRHPEKTLPNYRLPIEALAVLLVGLTGHLGGFLSGVNGLGR*
Ga0068865_1021168793	3300006881	Miscanthus Rhizosphere	LVCWIHWRVRRHPVASLPGYRLPIEAVAVLLVGVTGHLGGFLTGVNSAG*
Ga0099829_116815512	3300009038	Vadose Zone Soil	LIWRVFWSHLRVRRHPEESLPKFRLPIEAVAVLLVGLTGHLGGFLSGVNGPG*
Ga0116222_13060212	3300009521	Peatlands Soil	FWIHRRVWRLPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0116225_10731763	3300009524	Peatlands Soil	IWLVFWIHRRVLRLPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0116136_11059121	3300009547	Peatland	LILGCVSSVLIWLVFWIHRRVRRFPERALPKYRLPIEALAVLIVGLTGHLGGILSGVNGPG*
Ga0116114_11299992	3300009630	Peatland	SVLIWLVFWIHRRVRRFPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0116132_10880181	3300009646	Peatland	CVSSVLIWLVFWIHRRVRRSPERALPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0126374_107716532	3300009792	Tropical Forest Soil	LVLGCISSVLIWFVFWIHFRVQRHPEESLPKYRLPIEAVAVFVVGLTGHLGGFLSGVNGPG*
Ga0116219_100316624	3300009824	Peatlands Soil	LRHLILGCISSVLIWLVFWIHRRVWRLPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0126373_101683054	3300010048	Tropical Forest Soil	VFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFRSGVNGPG*
Ga0126373_110098382	3300010048	Tropical Forest Soil	SSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG*
Ga0126373_120667341	3300010048	Tropical Forest Soil	MHLVLGCLSSVLIWFVFWIHFRARRHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVN
Ga0074045_101192453	3300010341	Bog Forest Soil	MIWLVLWIHWRARHSSERSLSLPEYRLPIEALAVLVVGLTGHLGDFSVE*
Ga0074044_103857563	3300010343	Bog Forest Soil	LIWLVFWIHRRVRRHPEEPLPNYRLPLEALAVGIVMLTGHLGGFLSGVNFPG*
Ga0126370_122118912	3300010358	Tropical Forest Soil	FVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGLLSVVNGPG*
Ga0126378_115715831	3300010361	Tropical Forest Soil	KLKGILLAHLVVGGISSVLIWLVFWIHLRARRHPQLPLPTFRLPIEGIAVLLVAWTGHLGGFLSGVNGPG*
Ga0126378_116311882	3300010361	Tropical Forest Soil	LSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPPG*
Ga0126378_122058671	3300010361	Tropical Forest Soil	HLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG*
Ga0126378_122863121	3300010361	Tropical Forest Soil	LIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG*
Ga0126381_1000166361	3300010376	Tropical Forest Soil	MHLVLGCLSSVLIWFVFWIHLRTRRHVEESLPIYRLPIEAIAVLLVGLTGHLGGFLS
Ga0126381_1005331164	3300010376	Tropical Forest Soil	WIHLRTRRHVEESLPIYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG*
Ga0126381_1035350981	3300010376	Tropical Forest Soil	LVLGCLSSALIWFVFWIHLRARRHVEEYLPKYRLPIEAIAVLLVGLTAHLGGFLSGVNGPG*
Ga0126381_1046697652	3300010376	Tropical Forest Soil	VLIWAVFFIHWRARRRYQESLPKYRLALEAFAILIVVMTGHLVGFLSGVNGPG*
Ga0136449_1022181021	3300010379	Peatlands Soil	MHLVLGCISSVLIWLVLWIHSRVRRHPDESLPKYRLPIEALGVLLVGLTGHLGGFLSGVNAPG*
Ga0137393_106985602	3300011271	Vadose Zone Soil	LGCISSVLIWLVFWIHLRGRRHPEESLPKYRLPIEAVAMLLVGLTGHLGGFLSGVNGPG*
Ga0153924_11034243	3300012089	Attine Ant Fungus Gardens	LIWFVFWIHFRVQRHPEESLPKYRLLIEAVAVFVVGLTGHLGGFLSGVNGTG*
Ga0137389_112716631	3300012096	Vadose Zone Soil	SVLIWLVFGIHRRARSLPDGSLPNYRLILEGVAVLVVGLTGHLGGFLSGVNGPG*
Ga0137359_105986663	3300012923	Vadose Zone Soil	GCISSVLIWVVFSIHWRARRRHQESLPKYRLLIEALAILIVVLTAHLGGFLSGGNCPG*
Ga0164301_114499561	3300012960	Soil	ILLMHLILGCTSSVLIWLVCWIHWRVRRHPVASLPGYRLPIEAVAVLLVGVTGHLGGFLTGVNSAG*
Ga0164302_107911731	3300012961	Soil	SSGLIWLVCWIHWRVRRHPASSLPAYRLPVEAVAVLLIGLTAHLGGFLTGVNGPG*
Ga0181524_103805301	3300014155	Bog	TLLMHLSLGCISSGLIWLVFCIHQRVQQFPEKSLPNYRLPIEALAVLIVGLTGHLGGFLTGVNGPG*
Ga0181532_104781341	3300014164	Bog	HQPDQYTRHMSSVLIWLVFWIHRRVWRFPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0181536_101469422	3300014638	Bog	MSSVLIWLVFWIHRRVRRFPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG*
Ga0167631_10088761	3300015168	Glacier Forefield Soil	WIVFWIHLRARRHPEKPLPKYRLPIEALAVLLVGLTGHLGGFLSGVNGPG*
Ga0132258_116879254	3300015371	Arabidopsis Rhizosphere	TVLIGLVFWIHWRARSRPEESLPRYNLPIEAVAVFLVGLTGHLGGFLSGVNGPG*
Ga0132258_136408542	3300015371	Arabidopsis Rhizosphere	LLVHLVLGCISSVLIWLVDWIHWRVRRLPSAALPPYRLAIEAVTVLLVGLTSHLGGFLSGVNGPG*
Ga0132258_139309421	3300015371	Arabidopsis Rhizosphere	IWLMCWIHWRAQRAPGAPLPAYRLPIEALGVLIMGLTGHLGGFLSGVNG*
Ga0132257_1023036992	3300015373	Arabidopsis Rhizosphere	KGILLAHLILGCIVSALIWIVFRIHSQARHHEDKPLPTYRLPIEALAVLLVGLTAHLGGILSGVNG*
Ga0182036_114323473	3300016270	Soil	GILLMHLVLGCLSSVLIWFVFWIHLRAWRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0182036_116426931	3300016270	Soil	SVLIWFVFWIHLRARRHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG
Ga0182033_113670292	3300016319	Soil	VLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNRPG
Ga0182034_113346101	3300016371	Soil	LIWVVFWIHLRAWHHVEESLPKYRLPVEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0182037_101105614	3300016404	Soil	VLGCLSSVLIWFVFWIHLRAWRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNAPG
Ga0182037_104189021	3300016404	Soil	KGILLMHLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0182039_101017201	3300016422	Soil	SVLIWAVFFIHWRVRRRHQESLPKYRLALEAFAILIVVLTGHLGGFLSGVNGPG
Ga0181505_108566813	3300016750	Peatland	LVFFIHRRVRRSPEKSLPSYRLPIEGFAVLIVVLTGHLGGFLSGVNGPG
Ga0187818_102389292	3300017823	Freshwater Sediment	SVLIWLVFWIHRRVRRFPERSLPKYRLPIEALAALIVGLTGHLGGFLSGVNGPG
Ga0187856_11526782	3300017925	Peatland	SSVLIWLVFWIHRRVRRFPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPGQTSRVETGPAK
Ga0187854_101020621	3300017938	Peatland	FWIHRRVRRFPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG
Ga0187815_102249942	3300018001	Freshwater Sediment	CMSSVLIWLVFWIHRRVRRFPERSLPKYRLPIEALAALIVGLTGHLGGFLSGVNGPG
Ga0187873_11797091	3300018013	Peatland	SVLIWLVFWIHRRVRRFPERALPKYRLPIAALAVLIVALTGHLGGFLSGVNGPG
Ga0210399_111527501	3300020581	Soil	IWLVLLIHWRARRQNQDSLPTYRLVVEAFAVLIIVLTGHLGGFLSGVNGAG
Ga0210401_110232592	3300020583	Soil	LMHLVLGCVTSVLVWFVFLIHLRVRRHPEQYLPKYRLPVEAITVLLVGLTGHLGGFLSGVNGLG
Ga0210401_115898091	3300020583	Soil	LVLGCISSVLIWFVFWVHFRVRRHPEESLQKYRLPIEAVAVFVVGLTGHLGGFLSGVNGP
Ga0179596_100802222	3300021086	Vadose Zone Soil	ILLLHLVFGLVSTVSIWLVFGIHRRARSLPDGSLPNYRLIVEGVAVLIVGLTGHLGGFLSGVNGPG
Ga0210406_110124743	3300021168	Soil	LVLGCVSSVLIWLVLLIHWRARRQNGESLPKYRLVIEAFAVMVIVLTGHLGGFLSGVNGA
Ga0210405_100962933	3300021171	Soil	MHLVLGCMTSVLIWLVFWTHLRVRRHPEESSPKYRLPPEAIAVLLVGLTGHLGGFLSGVSQADTPLNSRQSCS
Ga0210408_101651663	3300021178	Soil	MHLVLGYITSVLIWLVFWIHLRVRRHPEESLPKYRLPLEAIALLLMGLPGHLDGFLSGVNGPG
Ga0210389_108258102	3300021404	Soil	MHLVLGYITTVLIWLVFWIHLRVRRHPEESLPKYRLPLEAIALLLMGLPGHLDGFLSGVNGPG
Ga0210387_113854171	3300021405	Soil	LLMHLILGCVSNVMIWLVFWIHWRARLRETPLPKYRLPIEALAVLILGLTGHLGGFLSGVNGPG
Ga0210392_114950601	3300021475	Soil	VFGGISSVLIWIVFWIHWRARRLPEQTLPTYRLPIEAVAVLLVGLTGHLGGFLSGVNGAG
Ga0210402_105330751	3300021478	Soil	KLRGILLLHLVFGCISSVLIWLVFGIHRRARRLPGGPLPKYRLVVEALAVVLVGLTGHLGGFLSGVNGPG
Ga0210402_108090743	3300021478	Soil	VLGSVSSLLIWLVFWIHLRARHHSGKSLPTYRLPIEAIAVLLVGLTAHLGGFLSGVNV
Ga0126371_108440752	3300021560	Tropical Forest Soil	CLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLRGVNGPG
Ga0126371_110555252	3300021560	Tropical Forest Soil	CLSSVLIWFVFWIHLRTRRHVEESLPIYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0126371_110635551	3300021560	Tropical Forest Soil	IWFVFWIHLRARRHGEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGAG
Ga0212123_106866461	3300022557	Iron-Sulfur Acid Spring	GCVSSGLIWLVFYIHWRARRSPGNPLPAYRLPVEGFAVLLVVLTGHLGGFLSGVNAPG
Ga0247788_11350232	3300022901	Soil	QWALEGQHLAGILLMHLVVGVASSVLIWYVCWMHWRGRQTSAAASLPAYRLPLEAIGVLLVALTGHLGGFLTGVNAAG
Ga0207654_110376421	3300025911	Corn Rhizosphere	SALIWIVFRIHSQARHHEDKALPTYRLPIEALAVLLVGLTAHLGGILSGVNG
Ga0207663_108702212	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	KLKGILLMHLIMGCVSTVLIWTVFAIHLRVRRHPERSLPDYRLPIEALAVLLVGLTGHLGGFLSGVNGPG
Ga0207646_103131212	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FVLWIHWRAQRHPEKPLPNYRLPIEALAVLLVGLTGHLGGFLSGVNGLG
Ga0207683_109346931	3300026121	Miscanthus Rhizosphere	IVFRIHSQARHHEDKPLPTYRLPIEALAVLLVGLTAHLGGILSGVNG
Ga0209648_100868954	3300026551	Grasslands Soil	MHLVLGCITSVLIWLVFWTHLRVRRHPEESSPRYRLPPEAIAVLLVGLTGHLGGFLSGVSQADTPLNSRQSCS
Ga0207819_10268772	3300027024	Tropical Forest Soil	LIHFPIALFTAAVSVLIWFVFWIHLRARRHAEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG
Ga0209213_10322823	3300027383	Forest Soil	LKGILLMHLVLGCISAVVIWVVFLIHLRARRHPENSLPTYRLSLEAMAVLLVGLTGHLGGFLSGVNGPG
Ga0209008_10164242	3300027545	Forest Soil	FLIHWRARRRDQESLPKYRLVIEALAILIVVLTAHLGGFLSGVNGAG
Ga0209528_10769161	3300027610	Forest Soil	HLILGCTSAVVIWAVFLIHLRTRRHPEKSLPNYRLSLEAIAVLLVGVTAHLGGFLSGVNGPG
Ga0208044_10946301	3300027625	Peatlands Soil	CISSGLIWLVFWIHRRAQRLPEKSLPNYRLPIEGIAVLIVGLTGHLGGFLSGINGPA
Ga0209693_102555761	3300027855	Soil	VLGCVSSVLIWLVLLIHWRARRQNPDSLPTYRLVVEAFAVLIVVLTGHLGGFLSGVNGAG
Ga0209006_112054151	3300027908	Forest Soil	IAWLHFRARTRPKYLLPTYRIPLELIAVALVGLTGHLGGFLSGVNGPG
Ga0209526_109323612	3300028047	Forest Soil	ISAVVIWVVFLIHLRSRRDPEKVLPTYRLSLEAIAVLLVVVTAHLGGFLSGVNGPG
Ga0308309_113957891	3300028906	Soil	WVVFAIHWRARRRGEESLPNYRLPIEGLAVLIVGLTGHLGGFLSGVNGPG
Ga0310039_100769791	3300030706	Peatlands Soil	LRHLILGCISSVLIWLVFWIHRRVWRLPERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPG
Ga0075386_110216591	3300030916	Soil	VLGCISSVLILFVFWIHLRVRRHREESMPKYRLPIEAVAVLLVGFTGHLGGFLSGVKRAWLDAPAAML
Ga0075394_118180251	3300030969	Soil	VLGCTSSVLIWLVFWIHLRARRHPDESLPKYRLPIEAVAVFVVGLTGHLGGFLSGVNGPG
Ga0170834_1010856361	3300031057	Forest Soil	MHLVLGCVSSVLFWLLFLIHLRVRRNPEKSLSKYRLPIEAVAVLFVALTGHLGVFLSGVN
Ga0170834_1026214572	3300031057	Forest Soil	VLGCITSVLIWLVFWIHLRVRRHPEESLPRYRLPLEAIAVLLVGLAGHLGGFLSDVSGPG
Ga0170834_1096958063	3300031057	Forest Soil	VVIWMVFLIHLRARRDPQKSLPTYRLSLEAMAVLLVVVTAHLGGFLSGVNGPG
Ga0170824_1025272341	3300031231	Forest Soil	LGCISAVVIWVVFLIHLRARRDPQKSLPTYRLSLEAMAVLLVVVTAHLGGFLSGVNGPG
Ga0302325_112978811	3300031234	Palsa	LIWLVFWIHSRVRRHPEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG
Ga0318528_101743111	3300031561	Soil	MHLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLS
Ga0310915_100185296	3300031573	Soil	MHLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNRPG
Ga0310686_1036197111	3300031708	Soil	SSVLIWIVFWIHQRARRVAERSLPKYRLPIEALAVLIVGLTGHLGGFLSGVNGPS
Ga0306917_101901103	3300031719	Soil	LIWFVFWIHSRTRCHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0306917_113675782	3300031719	Soil	VLIWLVFWIHLRARRHPQLPLPNFRLPVEGIAVLLVAWTAHLGGFLSGVNRPG
Ga0307475_101925744	3300031754	Hardwood Forest Soil	MRLVLGCITSVLIWLVFWTHLRVRRHPEESSPRYRLPPEAIAVLLVGLTGHLGEFLSGVSQADTPLNSRQSCS
Ga0318546_103823263	3300031771	Soil	MHLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVN
Ga0306919_109404392	3300031879	Soil	TSSVLIWAVFFIHWRVRRRHQESLPKYRLALEAFAILIVVLTGHLGGFLSGVNGPG
Ga0306925_109553211	3300031890	Soil	SVLIWFVLWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0307407_116532711	3300031903	Rhizosphere	LLLHLVLGCASTALVWLVYWIHWRVRRTPASALGAIRLPVEAVAVVLVALTGHLGGFLTGVNGPS
Ga0306923_100794096	3300031910	Soil	GILLMHLVLGCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0306923_106753951	3300031910	Soil	FWIHLRAWRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNAPG
Ga0306923_115037051	3300031910	Soil	LEGQKLKGILLMHLVLGCITSVPIWLVFWIHLRVRRHPEESLPRYRLPLEAIAVLLVGLRGHLGGFLNGVNGPG
Ga0310910_103677202	3300031946	Soil	SVLIWFVFWIHLRARRHAEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG
Ga0310911_106579281	3300032035	Soil	VVFWIRLRAWHHVEESLPKYRLPVEAIAVLLVGLTGHLGGFLSGVNGPG
Ga0311301_116117193	3300032160	Peatlands Soil	LGCISSVLIWLVLWIHSRVRRHPDESLPKYRLPIEALGVLLVGLTGHLGGFLSGVNAPG
Ga0310914_107863072	3300033289	Soil	VLIWFVFWIHLRARLHVEESLPKYRLPIEAVAVLLVGLTGHLGGFLSGVNGPG
Ga0310914_116036361	3300033289	Soil	GCLSSVLIWFVFWIHLRARRHVEESLPKYRLPIEAIAVLLVGLTGHLGGFLSGVNGPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065186

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences