Metagenome / Metatranscriptome Family F065173

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065173
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	73 residues
Representative Sequence	CKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ
Number of Associated Samples	99
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.75 %
% of genes near scaffold ends (potentially truncated)	79.69 %
% of genes from short scaffolds (< 2000 bps)	96.88 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.812 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.688 % of family members)
Environment Ontology (ENVO)	Unclassified (23.438 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.219 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.62% Coil/Unstructured: 62.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00216	Bac_DNA_binding	2.34
PF00313	CSD	2.34
PF00589	Phage_integrase	1.56
PF13437	HlyD_3	1.56
PF03734	YkuD	0.78
PF13407	Peripla_BP_4	0.78
PF11953	DUF3470	0.78
PF13557	Phenol_MetA_deg	0.78
PF00724	Oxidored_FMN	0.78
PF00872	Transposase_mut	0.78
PF12536	DUF3734	0.78
PF07238	PilZ	0.78
PF13565	HTH_32	0.78
PF01220	DHquinase_II	0.78
PF00732	GMC_oxred_N	0.78
PF01196	Ribosomal_L17	0.78
PF10276	zf-CHCC	0.78
PF13474	SnoaL_3	0.78
PF01734	Patatin	0.78
PF05532	CsbD	0.78
PF00106	adh_short	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	2.34
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0203	Ribosomal protein L17	Translation, ribosomal structure and biogenesis [J]	0.78
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.78
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.78
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.78
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.78
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.78
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
All Organisms	root	All Organisms	17.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
cellular organisms	root	All Organisms → cellular organisms	17.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.34 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.78 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	0.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Bradyrhizobium sp. A19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. A19	0.78 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.78 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.81 %
Archangium violaceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	0.78 %
Bradyrhizobium sp. A19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. A19	0.78 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005093\|Ga0062594_103212380	Not Available	512	Open in IMG/M
3300005439\|Ga0070711_100759314	Not Available	820	Open in IMG/M
3300005602\|Ga0070762_10583444	Not Available	741	Open in IMG/M
3300005921\|Ga0070766_11205747	Not Available	524	Open in IMG/M
3300006052\|Ga0075029_100296832	Not Available	1031	Open in IMG/M
3300006059\|Ga0075017_101449207	Not Available	540	Open in IMG/M
3300006102\|Ga0075015_100068583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1721	Open in IMG/M
3300006162\|Ga0075030_100493562	Not Available	974	Open in IMG/M
3300006163\|Ga0070715_10331466	Not Available	825	Open in IMG/M
3300006172\|Ga0075018_10212243	Not Available	922	Open in IMG/M
3300006174\|Ga0075014_100222520	Not Available	962	Open in IMG/M
3300006176\|Ga0070765_100493452	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006176\|Ga0070765_101705328	Not Available	592	Open in IMG/M
3300006755\|Ga0079222_11325118	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006854\|Ga0075425_101279671	Not Available	832	Open in IMG/M
3300007982\|Ga0102924_1296544	Not Available	644	Open in IMG/M
3300009521\|Ga0116222_1033397	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300009521\|Ga0116222_1051268	Not Available	1798	Open in IMG/M
3300009522\|Ga0116218_1219832	Not Available	856	Open in IMG/M
3300009524\|Ga0116225_1332081	Not Available	678	Open in IMG/M
3300009698\|Ga0116216_10155031	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300009839\|Ga0116223_10602574	Not Available	634	Open in IMG/M
3300010048\|Ga0126373_13224612	Not Available	508	Open in IMG/M
3300010360\|Ga0126372_12406480	Not Available	577	Open in IMG/M
3300010366\|Ga0126379_13045445	Not Available	561	Open in IMG/M
3300010379\|Ga0136449_101446824	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300010379\|Ga0136449_101756025	Not Available	931	Open in IMG/M
3300010379\|Ga0136449_101802501	Not Available	916	Open in IMG/M
3300010379\|Ga0136449_102052993	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300010396\|Ga0134126_11984917	Not Available	636	Open in IMG/M
3300011119\|Ga0105246_11748221	Not Available	592	Open in IMG/M
3300012951\|Ga0164300_10060845	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300012951\|Ga0164300_10453231	Not Available	720	Open in IMG/M
3300012951\|Ga0164300_10550537	Not Available	670	Open in IMG/M
3300012951\|Ga0164300_10557923	Not Available	667	Open in IMG/M
3300012955\|Ga0164298_10279672	Not Available	1022	Open in IMG/M
3300012955\|Ga0164298_10561353	Not Available	776	Open in IMG/M
3300012955\|Ga0164298_11341827	Not Available	550	Open in IMG/M
3300012957\|Ga0164303_10604689	Not Available	722	Open in IMG/M
3300012960\|Ga0164301_11682679	Not Available	529	Open in IMG/M
3300012961\|Ga0164302_10226577	Not Available	1170	Open in IMG/M
3300012984\|Ga0164309_10127713	Not Available	1655	Open in IMG/M
3300012984\|Ga0164309_10706366	Not Available	801	Open in IMG/M
3300012985\|Ga0164308_10098727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2046	Open in IMG/M
3300012986\|Ga0164304_10536332	Not Available	862	Open in IMG/M
3300012986\|Ga0164304_10904482	Not Available	691	Open in IMG/M
3300012986\|Ga0164304_11801349	Not Available	512	Open in IMG/M
3300012988\|Ga0164306_10540232	Not Available	903	Open in IMG/M
3300012989\|Ga0164305_10914134	Not Available	738	Open in IMG/M
3300013297\|Ga0157378_12268577	Not Available	594	Open in IMG/M
3300013297\|Ga0157378_13087440	Not Available	517	Open in IMG/M
3300016319\|Ga0182033_11435449	Not Available	622	Open in IMG/M
3300016341\|Ga0182035_10688192	Not Available	890	Open in IMG/M
3300016341\|Ga0182035_10836602	Not Available	809	Open in IMG/M
3300016371\|Ga0182034_11109058	Not Available	686	Open in IMG/M
3300016387\|Ga0182040_11253173	Not Available	625	Open in IMG/M
3300016404\|Ga0182037_11877268	Not Available	536	Open in IMG/M
3300016404\|Ga0182037_11938012	Not Available	528	Open in IMG/M
3300016422\|Ga0182039_11454103	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017823\|Ga0187818_10074403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1463	Open in IMG/M
3300017932\|Ga0187814_10238342	Not Available	688	Open in IMG/M
3300017933\|Ga0187801_10169756	Not Available	856	Open in IMG/M
3300017933\|Ga0187801_10419786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	558	Open in IMG/M
3300017946\|Ga0187879_10631520	Not Available	595	Open in IMG/M
3300017995\|Ga0187816_10253571	Not Available	768	Open in IMG/M
3300018007\|Ga0187805_10579950	Not Available	529	Open in IMG/M
3300020581\|Ga0210399_10670199	Not Available	854	Open in IMG/M
3300020581\|Ga0210399_11243008	Not Available	589	Open in IMG/M
3300020582\|Ga0210395_10408255	Not Available	1022	Open in IMG/M
3300020583\|Ga0210401_11230477	Not Available	607	Open in IMG/M
3300020583\|Ga0210401_11606336	Not Available	508	Open in IMG/M
3300021171\|Ga0210405_10327889	Not Available	1209	Open in IMG/M
3300021171\|Ga0210405_10353046	Not Available	1160	Open in IMG/M
3300021178\|Ga0210408_11088341	Not Available	615	Open in IMG/M
3300021180\|Ga0210396_10672127	Not Available	896	Open in IMG/M
3300021401\|Ga0210393_11054310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	657	Open in IMG/M
3300021401\|Ga0210393_11233028	Not Available	601	Open in IMG/M
3300021404\|Ga0210389_10476468	Not Available	982	Open in IMG/M
3300021405\|Ga0210387_11518482	Not Available	573	Open in IMG/M
3300021407\|Ga0210383_10118180	All Organisms → cellular organisms → Bacteria → Proteobacteria	2238	Open in IMG/M
3300021407\|Ga0210383_10267281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1469	Open in IMG/M
3300021420\|Ga0210394_10515111	Not Available	1052	Open in IMG/M
3300021420\|Ga0210394_10566537	Not Available	999	Open in IMG/M
3300021432\|Ga0210384_11203598	Not Available	662	Open in IMG/M
3300021433\|Ga0210391_11106157	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300021474\|Ga0210390_10531025	Not Available	990	Open in IMG/M
3300021477\|Ga0210398_11259056	Not Available	583	Open in IMG/M
3300021478\|Ga0210402_10341798	Not Available	1388	Open in IMG/M
3300021479\|Ga0210410_10129110	Not Available	2245	Open in IMG/M
3300021479\|Ga0210410_11267101	Not Available	629	Open in IMG/M
3300021560\|Ga0126371_12805869	Not Available	591	Open in IMG/M
3300022525\|Ga0242656_1128478	Not Available	519	Open in IMG/M
3300022528\|Ga0242669_1063480	Not Available	656	Open in IMG/M
3300022532\|Ga0242655_10083188	Not Available	852	Open in IMG/M
3300022726\|Ga0242654_10318588	Not Available	577	Open in IMG/M
3300024271\|Ga0224564_1057706	Not Available	762	Open in IMG/M
3300025929\|Ga0207664_11458714	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025939\|Ga0207665_11191496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300026984\|Ga0208732_1010557	Not Available	767	Open in IMG/M
3300027173\|Ga0208097_1023605	Not Available	700	Open in IMG/M
3300027330\|Ga0207777_1092033	Not Available	524	Open in IMG/M
3300027570\|Ga0208043_1198665	Not Available	507	Open in IMG/M
3300027604\|Ga0208324_1097629	Not Available	823	Open in IMG/M
3300027911\|Ga0209698_10468808	Not Available	978	Open in IMG/M
3300028906\|Ga0308309_10702115	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300029636\|Ga0222749_10113702	Not Available	1285	Open in IMG/M
3300030494\|Ga0310037_10211687	Not Available	855	Open in IMG/M
3300030707\|Ga0310038_10069216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1924	Open in IMG/M
3300031573\|Ga0310915_10685578	Not Available	724	Open in IMG/M
3300031708\|Ga0310686_106259388	Not Available	920	Open in IMG/M
3300031792\|Ga0318529_10476381	Not Available	581	Open in IMG/M
3300031890\|Ga0306925_11428336	Not Available	681	Open in IMG/M
3300031910\|Ga0306923_10275393	Not Available	1925	Open in IMG/M
3300031912\|Ga0306921_12219506	Not Available	578	Open in IMG/M
3300031942\|Ga0310916_10921459	Not Available	732	Open in IMG/M
3300031946\|Ga0310910_10638050	Not Available	844	Open in IMG/M
3300031946\|Ga0310910_10767087	Not Available	761	Open in IMG/M
3300032001\|Ga0306922_12205429	Not Available	531	Open in IMG/M
3300032059\|Ga0318533_10573254	Not Available	828	Open in IMG/M
3300032059\|Ga0318533_10977232	Not Available	621	Open in IMG/M
3300032059\|Ga0318533_11073426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	590	Open in IMG/M
3300032076\|Ga0306924_10878224	Not Available	994	Open in IMG/M
3300032180\|Ga0307471_100906696	Not Available	1049	Open in IMG/M
3300032261\|Ga0306920_101320530	Not Available	1037	Open in IMG/M
3300032261\|Ga0306920_103148990	Not Available	619	Open in IMG/M
3300032261\|Ga0306920_103981076	Not Available	537	Open in IMG/M
3300032515\|Ga0348332_11821556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. A19	934	Open in IMG/M
3300033289\|Ga0310914_10758531	Not Available	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.88%
Host-Associated	Host-Associated	3.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.16%
Aquatic	Environmental → Aquatic	11.72%
Plants	Host-Associated → Plants	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.38%
Freshwater	Environmental → Aquatic → Freshwater	5.47%
Sediment	Environmental → Aquatic → Sediment	5.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1032123801	3300005093	Soil	LSCGFDSGRASDGTVQMRMLCTNPEDKESSMYGAQLKLLPGKKIELILEPMDQK*
Ga0070711_1007593141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GSLSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0070762_105834442	3300005602	Soil	MTLDTGRLLCGFDSGTASDGTLKMRMHCTDPEEKQPSMYGAQLKLQPGKKIELIMEPMDQQ*
Ga0070766_112057471	3300005921	Soil	GGCKLKAGSLSIDRMTLDTGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLIYGAQLKLLPGKKIELVLEPVDQK*
Ga0075029_1002968321	3300006052	Watersheds	ILGSIPEEFRGDRCWQENTNGEKIFKSGACKPKAGSLSIDRMTLDTGRLSCVFDSGTASDGTLKMRMHCTDLEEKQPTMYGAQLKLQPGKKIELIMG*
Ga0075017_1014492071	3300006059	Watersheds	QENTKDNIFKPGGCKLKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPVDQK*
Ga0075015_1000685835	3300006102	Watersheds	SCGFDSGTASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPVDQK*
Ga0075030_1004935621	3300006162	Watersheds	EIFRPGACKLKPGSLSVDRMTLDTDHLSCVFDSGTASDGTLKMRMHCTDPDEKKPSIYGAQLKLQPGKKIELNIEPMDQQ*
Ga0070715_103314661	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGARLNLRPGKKIELIIEPMDQQ*
Ga0075018_102122431	3300006172	Watersheds	TKDNIFKPGGCKLKAGSLSIDRMTLDTGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPVDQK*
Ga0075014_1002225201	3300006174	Watersheds	SIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEDQPSMYGAQLKLRSGKKIELVIEPLDQQ*
Ga0070765_1004934522	3300006176	Soil	EVFRSGACKPKADSLSINRMSLDTGRLSCVFDSGTVSEGTFKMRMHCSDSEEKQPSMYGAQLTLLPGRKIQLIIEPMDQR*
Ga0070765_1017053281	3300006176	Soil	GSIPEEFRGDWCWQENTNEEIFRPGACKHKAGSLSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0079222_113251182	3300006755	Agricultural Soil	MTLDRGRLSCLFDSATTSGGILNMRLHCSDAEEKQPSMYGAQIKLRPDKKIELVMEPLDQQ*
Ga0075425_1012796712	3300006854	Populus Rhizosphere	RLSCVFDSGTASDGTLNTKLHCSDPEEKQPSMYGAQIKLRPDKKIELVMEQMDQQ*
Ga0102924_12965441	3300007982	Iron-Sulfur Acid Spring	MTLDTGRLSCVFDSGTATDGTLKMRMHCTDPKEKQPSMYGAQLKLQPGKKIELIMEPMEQQ*
Ga0116222_10333973	3300009521	Peatlands Soil	LAELVTRRTGLRRCDGAKVKEGRLIQERKKSMKKIIAEEIFRRGECKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ*
Ga0116222_10512681	3300009521	Peatlands Soil	RLSCGFDSGTASDGTLNMRMLCTDPEEKQPSMYGAQLKLRPGKKIELIIEPMDQQ*
Ga0116218_12198321	3300009522	Peatlands Soil	VKEGRLIQERKKSMKKIIAEEIFRRGECKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLSGKKIELIIEPMDQQ*
Ga0116225_13320811	3300009524	Peatlands Soil	RGDWCWQEKTNGDEIFRPGACKLKAGSLSIDRMTLDTGRLSCVFDSGTASDGTLKMRMHCSDPEEKRPSMYGAQLKVRPDKKIELIIELMDQQ*
Ga0116216_101550311	3300009698	Peatlands Soil	VKEGRLIQERKKSMKKIIAEEIFRRGECKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ*
Ga0116223_106025742	3300009839	Peatlands Soil	CKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ*
Ga0126373_132246122	3300010048	Tropical Forest Soil	FRSGACKLKSGSLSIERMTVDTGRLSCVFDSGTASDGTLNMRLHCSGLEEKQPSMYDARLKLRPDKKIELVVEPMDQW*
Ga0126372_124064802	3300010360	Tropical Forest Soil	FDSGTTSDGILNMRLHCSDAEEKQPSMYGAQIKLRPDKKIELVMEPLDQQ*
Ga0126379_130454452	3300010366	Tropical Forest Soil	MTLDKGRLSCVFDSGTASDGTLNMRLHCSDTEEKQPSMYGAQLKLRPDKKIELVVEPMDQQ*
Ga0136449_1014468241	3300010379	Peatlands Soil	GRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLSGKKIELIIEPMDQQ*
Ga0136449_1017560251	3300010379	Peatlands Soil	LSIGRMTLDTGHLSCGFDSGAVTEDTLKIRRLCTDPEDKQSSMYGAQLTLLPGKKIELIIEPMDQR*
Ga0136449_1018025011	3300010379	Peatlands Soil	GRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ*
Ga0136449_1020529933	3300010379	Peatlands Soil	VFDSGTASDGTLKMRMHCSDPEEKQPSMYGAQLKLRPDKKIELIVEPMDQQ*
Ga0134126_119849171	3300010396	Terrestrial Soil	GFDNGTASEGTLNMRMLCADFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0105246_117482211	3300011119	Miscanthus Rhizosphere	RGDWCWQENTNGEEIFRPGACKRKAGSLSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0164300_100608452	3300012951	Soil	WCQESTKDSIFKPGGCKLKAGSLSIDRMTLDAGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILQPMDQK*
Ga0164300_104532312	3300012951	Soil	MTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0164300_105505372	3300012951	Soil	GDWCQESTKDNIFKPSGCKLKAGSLSIDRITIDTGRLSCGFDSEAASEGTLQMRMLCTDPEDKEALMYGAQLKLLPGKKIELILEPTDQK*
Ga0164300_105579231	3300012951	Soil	MLQLPKLSVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ*
Ga0164298_102796723	3300012955	Soil	MTLDTGRLSCVFDSGTARDDTFKMRMHCTDPEEKQPSMYGTQLKLQPGKKIELIMEPTNQQ*
Ga0164298_105613532	3300012955	Soil	MTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDLQ*
Ga0164298_113418271	3300012955	Soil	SLDTDYLSCVFDSGTASDGTLKMRMHCTDPDEKKPSIYGAQLKLQPGKKIELIIEPMDQQ
Ga0164303_106046891	3300012957	Soil	TGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ*
Ga0164301_116826792	3300012960	Soil	MTLDTGRLSCGFDSGTAREGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0164302_102265771	3300012961	Soil	MLQLPKLSVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAPLKLQPGTKIELIIEPMDQQ*
Ga0164309_101277131	3300012984	Soil	QENTNGEQIFRPGACKLKPGALSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0164309_107063662	3300012984	Soil	QENTKDNIFKPGGCKFKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILQPMDQK*
Ga0164308_100987271	3300012985	Soil	PGGCKLKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPTDQK*
Ga0164304_105363321	3300012986	Soil	KAGSLSIDRMTLDTGRLSCDFDSGAASEGTLQMRMLCTDPEEESLMYGAQFKLLPGKKIELILEPTDQK*
Ga0164304_109044822	3300012986	Soil	GACKQKAGSLSIDRMTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGARLNLRPGKKIELIIEPMDQQ*
Ga0164304_118013491	3300012986	Soil	DTGRLSCVFDSGMASDSTLKMRMHCTDPEEKQPSMYGAQLKLQPGKKIELVIEPLDQQ*
Ga0164306_105402321	3300012988	Soil	MTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0164305_109141342	3300012989	Soil	MLQLPKLSVDRMTLDTGCLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ*
Ga0157378_122685773	3300013297	Miscanthus Rhizosphere	FDSGTASGGTLNMRLHCSDAEETQPSMYGAKLKLRPDKKIELIVEPMDQQ*
Ga0157378_130874401	3300013297	Miscanthus Rhizosphere	FRPGACKRKAGSLSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ*
Ga0182033_114354491	3300016319	Soil	SLSIDRMSLDTSRLSCGFDSGTASDATLKMRMLCTDFDEKQPSMYGAQLTLLPGKKIELILEPMDQQ
Ga0182035_106881921	3300016341	Soil	KEIFRSGACKLAGSLSIDRMTPRNGAPILVFDSGTASDGTLNMRLHRSDPEEKQPSMYGAQLKLRRDKKIELTIEPTDQQQLRLEGATAPKNPKTCA
Ga0182035_108366021	3300016341	Soil	ENTNGEEIFRSGACKLKAGSLSIDRMTLDTSRLSCVFDSGTASDGTLNMRLHCSDPVDKQPPMYGAQLKLRPDKKIELIVEPMDQR
Ga0182034_111090581	3300016371	Soil	VFDSGTASDGTLNMRLHRSDPEEKQPSMYGAQLKLRRDKKIELTIEPTDQQ
Ga0182040_112531731	3300016387	Soil	MTLDTSRLSCGFDSGTASDSTLKMRMLCTDFDEKQPSMYGAQLTLLPGNKIELVIE
Ga0182037_118772681	3300016404	Soil	GSLSIDRMTLDTSRLSCVFDSATASDSTLNMRLHCSAPEEQQPSMYGAQLKLRPDKKIELIIEPMDQK
Ga0182037_119380121	3300016404	Soil	GRLSCGFDSGTASDGTLKMRMLCTDFDEKQPSMYGAQLTLLPGRKIELVIEPMDQQ
Ga0182039_114541032	3300016422	Soil	SCKLKTGSLRIDRMTLDTGRLYCGFDSGMASDDTLKMRMLCTDPEEKQSSVYGAQLKLLPGKKIELIIEPIDQQ
Ga0187818_100744032	3300017823	Freshwater Sediment	FRSGACKPKAGSLNIDRMTLDMGRLSCGFDSGTASDGTLNMRMLCTDPEEKQPSMYGAQLKLRPGKKIELIIEPMDQQ
Ga0187814_102383421	3300017932	Freshwater Sediment	EFRGDWCWQENTNGEEIFRSGACKLKAGSLSIDRMTLDTGRLSCVFDSGTASDGTLKMRMLCTDPEDNQSSMYGAQLKLLPGKKIELIIEPMDQQ
Ga0187801_101697561	3300017933	Freshwater Sediment	QENTNGEEIFRPGACKLKAGSLSIDRMTLDTGRLSCVFDSGTASDGMRMLCTDPEDKQSSMYGAQLKLLPGKKIELIIEPMDQQ
Ga0187801_104197861	3300017933	Freshwater Sediment	TGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLIYGAQLKLLPGKKIELVLEPVGEK
Ga0187879_106315201	3300017946	Peatland	GECKLKAGSLSIDRMTLDTGRLSRGFDSGTASDGTLQMRMLCADPEDKESLIYGAQLKLLPGKKIELVLEPVGEK
Ga0187816_102535712	3300017995	Freshwater Sediment	DWCWQEQTSGEEVFRPGACKLKPGALSIDRMTLDRGRLSCVFDSGTASDDTLKMRMYCTDPEEKQPSMYGAQLKLRPGKKIELVIEPLDQQ
Ga0187805_105799502	3300018007	Freshwater Sediment	FRGDWCWQEKTSGEEVFRPGACKLKPGALSIDRMTLDTGRLSCGFDSGTASNGTLNMRMLCTDFEEEEPSMYGAQLNLRPGKKIELIMEPRDQQ
Ga0210399_106701991	3300020581	Soil	GCKLKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILQPMDQK
Ga0210399_112430081	3300020581	Soil	QMLQLPKLSVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ
Ga0210395_104082551	3300020582	Soil	LQENINGEEIFRPGACKLKPGSLSVDRMSLDTGYLSCVFDSGTASDGTLKMRMHCTDPDEKKPSIYGAQLKLQPGKKIELIIEPMDQQ
Ga0210401_112304771	3300020583	Soil	DRMSLDTGYLSCVFDSGTASDGTLKMRMHCTDPDEKKPSIYGAQLKLQPGKKIELIIEPMDQQ
Ga0210401_116063361	3300020583	Soil	LTREKGRLSCVFDSGTASDGTLQMRMHCADSEEKHLSMYGVQLRLQPGKKIELIMEPMDQ
Ga0210405_103278891	3300021171	Soil	MTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGARLNLRPGKKIELIIEPMDQ
Ga0210405_103530461	3300021171	Soil	PGGCKLKAGSLSIDRMTLDAGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPIDQK
Ga0210408_110883413	3300021178	Soil	DRMTLDTGRLSCVFDSGTASDDTLKMRMHCTDPEEKQPSMYGTQLKLQPGKKIELIMEPTNQQ
Ga0210396_106721271	3300021180	Soil	LKTGSLSIDRMTLDTGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPIDQK
Ga0210393_110543103	3300021401	Soil	LSCIFDSGAISDGIVNMRLQCSDPEEKQPSMYGAQIKLKPDKKIELIMEPVDNSN
Ga0210393_112330281	3300021401	Soil	MLQLPKLSVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ
Ga0210389_104764682	3300021404	Soil	CKHKAGSLSIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ
Ga0210387_115184821	3300021405	Soil	SIPEEFRGDWCSQENTNGEQMFRPGARKLKPGALSIDRMTLDTGRLSCVFDSGTASDDTLEMRMHCTDPEEKQPSMYGAQLKLRPGKEIELIIEPVD
Ga0210383_101181807	3300021407	Soil	LDTGRLSCGFDSGTASDGTLMMRLLCADPEDKESLMYSAQLKLLPGKKIELILEPTDQK
Ga0210383_102672813	3300021407	Soil	QIFRPGACKPKAGSLNIDRLTLDKGRLSCVFDSGTASDGTLQMRMHCADSEEKHLSMYGVQLRLQPGKKIELIMEPMDQQ
Ga0210394_105151111	3300021420	Soil	MTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPTDQ
Ga0210394_105665372	3300021420	Soil	MLQLPKLSVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKIQLGTKIELIIEPMDQQ
Ga0210384_112035982	3300021432	Soil	HACFLSIVDRMTLDTGYLSCVFDSGTASDGTLQMRMHCTDPDEKKPSIYGAQLKLQPGTKIELIIEPMDQQ
Ga0210391_111061572	3300021433	Soil	GRLSCVFDSGTVSEGTFKMRMHCSDSEEKQPSMYGAQLTLLPGRKIQLIIEPMDQR
Ga0210390_105310251	3300021474	Soil	WCWQENSNGEEVFRSGACKPKADSLSINRMSLDTGHLSCVFDSGTVTEGTLKMRMHCSDSEEKQPSMYGAQLTLRPGRKIELIIEPMDQQ
Ga0210398_112590561	3300021477	Soil	WQENTNGEEIFRPGACKHKAGSLSIDRMTLDTGRLLCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGAQLNLRPGKKIELIIEPMDQ
Ga0210402_103417981	3300021478	Soil	CQENTKDNIFKPGGCKLKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILQPMDQK
Ga0210410_101291101	3300021479	Soil	ENTKDNVFKPGGCKLKAGSLSIDRLTLDTGRLSCGFDSGAASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPMDQK
Ga0210410_112671011	3300021479	Soil	KAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPVDQK
Ga0126371_128058691	3300021560	Tropical Forest Soil	MTLDTGRLSCVFDSGTASDGTLNMRLHCSGLEEKQPSMYDARLKLRPDKKIELVVEPMDQ
Ga0242656_11284781	3300022525	Soil	GACKLKAGSLSIDRMTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLDQQ
Ga0242669_10634801	3300022528	Soil	SIDRMTLDTGRLSCGFDSGTASEGTLNMRMLCTDFEEEQPSMYGAQLKLRPGKKIELVIEPLGQQ
Ga0242655_100831881	3300022532	Soil	EEFRGDWCWQENTNGEEIFRPGACKHKAGSLSIDRMTLDTGRLLCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGAQLKLRPGKKIELVIEPMDLQ
Ga0242654_103185881	3300022726	Soil	GFDSGTASDGTLNMRMLCTDFEEEEPSMYGAQLNLRPGKKIELIIEPMDQQ
Ga0224564_10577062	3300024271	Soil	IRMTLDTGRLSCIFDSGTASDGTLKMRMHCTDSEEKQPSMYGAQLKLQPGKKIELIMEPMDQQ
Ga0207664_114587142	3300025929	Agricultural Soil	WCQESTKDNIFKPGGCKLKTASLSIDRMTLDAGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPTDQK
Ga0207665_111914962	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	WCQENTKDNIFKPGGCKLKAGSLSIDRMTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPIDQK
Ga0208732_10105573	3300026984	Forest Soil	MTLDTGRLSCGFDSGAASEGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELVIEPLDQ
Ga0208097_10236052	3300027173	Forest Soil	LSIDRMTLDAGRLSCGFDSGTASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPIDQK
Ga0207777_10920331	3300027330	Tropical Forest Soil	WCWQEIVNDEQIFKTGACKLKAGSLSIDRMTLDRGRLSCLFDSGTTSDGILNMRLHCSDVEETQPSMYGAQIKLRPDNKIELVMEPMDQQ
Ga0208043_11986652	3300027570	Peatlands Soil	LSCGFDSGTASDGTLNMRMLCTDPEEKQPSMYGAQLKLRPGKKIELIIEPMDQQ
Ga0208324_10976291	3300027604	Peatlands Soil	MKKIIAEEIFRRGECKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMHCSDPEEKRPSMYGAQLKVRPDKKIELIIELMDQQ
Ga0209698_104688081	3300027911	Watersheds	EEIFRPGACKLKPGSLSVDRMTLDTDHLSCVFDSGTASDGTLKMRMHCTDPDEKKPSIYGAQLKLQPGKKIELNIEPMDQQ
Ga0308309_107021152	3300028906	Soil	EVFRSGACKPKADSLSINRMSLDTGRLSCVFDSGTVSEGTFKMRMHCSDSEEKQPSMYGAQLTLLPGRKIQLIIEPMDQR
Ga0222749_101137022	3300029636	Soil	MTLDTGRLSCGFDSGTASDGTLNMRMLCTDFEEEEPSMYGARLNLRPGNKIELIIEPMDQ
Ga0310037_102116872	3300030494	Peatlands Soil	MKKIIAEEIFRRGECKLKAGSLSIGRMTLDTGRLSCGFDSGTASDGTLKMRMLCTDPEDKQSSMYGAQLKLLSGKKIELIIEPMDQQ
Ga0310038_100692161	3300030707	Peatlands Soil	GDEIFRPGACKLKAGSLSIDRMTLDTGRLSCVFDSGTASDGTLKMRMHCSDPEEKRPSMYGAQLKVRPDKKIELIIELMDQQ
Ga0310915_106855783	3300031573	Soil	TSRLSCVFDSGTASDGTLNMRLHCSDPVDKQPSMYGAQLKLRPDKKIELIVEPMDQR
Ga0310686_1062593881	3300031708	Soil	GDWCWQEKTNGEEIFRPGACKLKPGSLSIDRMTLDTGRLSCVFDSGMASDSTLKMRMHCTDPEEKQPSMYGAQLKLQPGKKIELIMEPMDQQ
Ga0318529_104763812	3300031792	Soil	SLSIDRTTLDTGPLSCIFDSGTASDGRLKMRMQCSNSDEKQPLTYGAQLTLLPGQKIELVIEPLDQQ
Ga0306925_114283361	3300031890	Soil	KFGICKLKTGSLSIDRMTLDNGRLSCIFDSGTTSDGILNMRLHCSDPKEEQPSMYGAQVKLRPDKKIELIMEPIDQH
Ga0306923_102753933	3300031910	Soil	MTLDKGRLSCVFDSGTASDGTLNMRLHCSDTEEKQPSMYGAQLKLRPDKKIEFIVDPMDQ
Ga0306921_122195061	3300031912	Soil	RGDWCWQDNTKGEEIFRPGECKRKAGSLSIDRMTLDTSRLSCGFDSGTASDSTLKMRMLCTDFDEKQPSMYGAQLTLLPGKKIELVIEPMDQQ
Ga0310916_109214591	3300031942	Soil	ACKRKAGSLSIDRMTLDTSRLSCGFDSGTASDGTLKMRMLCTDFDEKQPSMYGAQLTLLPGKKIELILEPVDQQ
Ga0310910_106380501	3300031946	Soil	PGKCKRKARSLSIDRTTLDTGPLSCIFDSGTASDGRLKMRMQCSNSDEKQPLTYGAQLTLLPGQKIELVIEPLDQQ
Ga0310910_107670871	3300031946	Soil	KGEEIFRPGECKRKAGSLSIDRMTLDTSRLSCGFDSGTASDGTLKMRMLCTDFDEKQPSMYGAQLTLLPGKKIELILEPVDQQ
Ga0306922_122054291	3300032001	Soil	ILVFDSGTASDGTLNMRLHRSDPEEKQLSMYGAQLKLRRDKKIELTIEPTDQQ
Ga0318533_105732541	3300032059	Soil	CKLKTGSLRIDRMTLDTGRLYCGFDSGMASDDTLKMRMLCTDPEEKQSSVYGAQLKLLPGKKIELIIEPIDQQ
Ga0318533_109772321	3300032059	Soil	CWQENTKGDEIFRPGACKRKAGSLSIDRMTLDTSRLSCGFDSGTASDGTLKMRMLCTDFDEKQPSMYGAQLTLLPGRKIELIIEPVDQQ
Ga0318533_110734262	3300032059	Soil	LFDSGTPNDGILNIRLHCSDAGEKQPSMYGAQIRLRPDKKIELIMESMSQQ
Ga0306924_108782241	3300032076	Soil	KLKTGSLSIDRMTLENGRLSCIFDSGTTSDGILNMRLHCSDPKEEQPSMYGAQVKLRPDKKIELIMEPIDQQ
Ga0307471_1009066963	3300032180	Hardwood Forest Soil	SLSIDRLTLDTGRLSCGFDSGAASDGTLQMRMLCTDPEDKESLMYGAQLKLLPGKKIELILEPMDQK
Ga0306920_1013205302	3300032261	Soil	IPEEFRGDWCQESTKDNIFKPAGCKPKAGSLSIDRMTLDTGRLSCGFDSGTASDGTLMMRLLCADPEDKESLMYSAQLKLLPGKKIELILEPTDQK
Ga0306920_1031489902	3300032261	Soil	HSGNPPTPKSSSAIPEEFRGDWCWQENTNGDQVFRLGSCKLKTGSLRIDRMTLDTGRLYCGFDSGMASDDTLKMRMLCTDPEEKQSSVYGAQLKLLPGKKIELIIEPIDQQ
Ga0306920_1039810762	3300032261	Soil	QTILGSIPEEFQGTWCWQENAKGEEIFRPGKCKRKARSLSIDRTTLDTGPLSCIFDSGTASDGRLKMRMQCSNSDEKQPLTYGAQLTLLPGQ
Ga0348332_118215562	3300032515	Plant Litter	CKPKAGSLNIDRMTLDTGRLSCIFDSGTASDGTLKMRMHCTDSEEKQPSMYGAQLKLQSGKKIELIMEPMDQQ
Ga0310914_107585312	3300033289	Soil	KGEEIFRPGACKREAGSLSIDRMTLDTSRLSCGFDSGTASDGTLKMRMLCTESEEKQSSVYGAQLKLLPGKKIELIIEPMDQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences