Metagenome / Metatranscriptome Family F065148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065148
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	47 residues
Representative Sequence	HQKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAVIAIATAR
Number of Associated Samples	105
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.25 %
% of genes near scaffold ends (potentially truncated)	92.97 %
% of genes from short scaffolds (< 2000 bps)	97.66 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.531 % of family members)
Environment Ontology (ENVO)	Unclassified (28.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.16% β-sheet: 0.00% Coil/Unstructured: 43.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04140	ICMT	7.81
PF00171	Aldedh	7.03
PF13449	Phytase-like	3.91
PF00210	Ferritin	2.34
PF00753	Lactamase_B	2.34
PF02518	HATPase_c	1.56
PF07883	Cupin_2	1.56
PF13936	HTH_38	1.56
PF01022	HTH_5	1.56
PF06224	HTH_42	1.56
PF13527	Acetyltransf_9	1.56
PF01381	HTH_3	0.78
PF07885	Ion_trans_2	0.78
PF09365	DUF2461	0.78
PF05145	AbrB	0.78
PF09995	MPAB_Lcp_cat	0.78
PF16655	PhoD_N	0.78
PF14534	DUF4440	0.78
PF10282	Lactonase	0.78
PF13230	GATase_4	0.78
PF01914	MarC	0.78
PF00881	Nitroreductase	0.78
PF07730	HisKA_3	0.78
PF03466	LysR_substrate	0.78
PF05988	DUF899	0.78
PF01590	GAF	0.78
PF08327	AHSA1	0.78
PF08450	SGL	0.78
PF00561	Abhydrolase_1	0.78
PF09037	Sulphotransf	0.78
PF01243	Putative_PNPOx	0.78
PF00892	EamA	0.78
PF12695	Abhydrolase_5	0.78
PF05235	CHAD	0.78
PF08281	Sigma70_r4_2	0.78
PF00196	GerE	0.78
PF13191	AAA_16	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	7.03
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	7.03
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	7.03
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	1.56
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.78
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.78
COG3180	Uncharacterized membrane protein AbrB, regulator of aidB expression	General function prediction only [R]	0.78
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.78
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.78
COG4424	LPS sulfotransferase NodH	Cell wall/membrane/envelope biogenesis [M]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.47 %
Unclassified	root	N/A	19.53 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.81 %
Unclassified	root	N/A	19.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.91 %
Unclassified	root	N/A	19.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.34 %
Unclassified	root	N/A	19.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.34 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.78 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	20.31 %
Unclassified	root	N/A	19.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.34 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.78 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.78 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.31 %
Unclassified	root	N/A	19.53 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.78 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.78 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.78 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.31 %
Unclassified	root	N/A	19.53 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.78 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.78 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.31 %
Unclassified	root	N/A	19.53 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.78 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.78 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20.31 %
Unclassified	root	N/A	19.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.78 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.78 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.78 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.78 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0599488	Not Available	843	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2285551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300004153\|Ga0063455_101020003	All Organisms → cellular organisms → Bacteria → Terrabacteria group	601	Open in IMG/M
3300004156\|Ga0062589_102563443	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300004157\|Ga0062590_101828173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	624	Open in IMG/M
3300004479\|Ga0062595_100106471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1508	Open in IMG/M
3300005093\|Ga0062594_101328526	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005093\|Ga0062594_101799884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300005093\|Ga0062594_102035113	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005181\|Ga0066678_10658506	All Organisms → cellular organisms → Bacteria → Terrabacteria group	698	Open in IMG/M
3300005329\|Ga0070683_101412017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	669	Open in IMG/M
3300005329\|Ga0070683_101966150	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005336\|Ga0070680_101460470	Not Available	592	Open in IMG/M
3300005356\|Ga0070674_101281159	Not Available	653	Open in IMG/M
3300005440\|Ga0070705_100169363	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300005441\|Ga0070700_100709526	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005459\|Ga0068867_101590414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300005578\|Ga0068854_101676517	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005615\|Ga0070702_100898293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300005713\|Ga0066905_100474192	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300005937\|Ga0081455_10078172	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300005937\|Ga0081455_10215573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1427	Open in IMG/M
3300005985\|Ga0081539_10428307	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006046\|Ga0066652_101415707	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006163\|Ga0070715_10743771	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006575\|Ga0074053_10001871	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300006575\|Ga0074053_11494139	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006606\|Ga0074062_10019157	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300006844\|Ga0075428_100598776	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300006846\|Ga0075430_100543935	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300006852\|Ga0075433_10630697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300006853\|Ga0075420_100904670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300006894\|Ga0079215_11012710	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006953\|Ga0074063_10056755	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006953\|Ga0074063_14170640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300006969\|Ga0075419_10403920	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300009094\|Ga0111539_12684966	Not Available	577	Open in IMG/M
3300009098\|Ga0105245_11969719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300009100\|Ga0075418_12501554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300009147\|Ga0114129_11193173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300009162\|Ga0075423_10195225	Not Available	2123	Open in IMG/M
3300009162\|Ga0075423_11825582	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009176\|Ga0105242_10321462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1419	Open in IMG/M
3300009553\|Ga0105249_11879850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300009789\|Ga0126307_10055565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3098	Open in IMG/M
3300009840\|Ga0126313_10144732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1790	Open in IMG/M
3300009840\|Ga0126313_10722153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	808	Open in IMG/M
3300009840\|Ga0126313_11854745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300010036\|Ga0126305_10583395	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300010037\|Ga0126304_10259619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300010037\|Ga0126304_10997780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300010039\|Ga0126309_10269735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300010040\|Ga0126308_10264234	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1122	Open in IMG/M
3300010166\|Ga0126306_10129126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1858	Open in IMG/M
3300010166\|Ga0126306_10916050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300010166\|Ga0126306_11463352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300010166\|Ga0126306_11655474	Not Available	534	Open in IMG/M
3300010396\|Ga0134126_12433493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300010401\|Ga0134121_10225912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1628	Open in IMG/M
3300011119\|Ga0105246_10825372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300011412\|Ga0137424_1059952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300012354\|Ga0137366_10399437	Not Available	1001	Open in IMG/M
3300012477\|Ga0157336_1007783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300012684\|Ga0136614_10780788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300012891\|Ga0157305_10041883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300012910\|Ga0157308_10236565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300012958\|Ga0164299_10843392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012989\|Ga0164305_11825167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300014325\|Ga0163163_10452569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300014326\|Ga0157380_13486061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	504	Open in IMG/M
3300015372\|Ga0132256_100516299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300015372\|Ga0132256_103173247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300015372\|Ga0132256_103364869	Not Available	538	Open in IMG/M
3300015374\|Ga0132255_102712212	Not Available	757	Open in IMG/M
3300017965\|Ga0190266_10838411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300018000\|Ga0184604_10157114	Not Available	754	Open in IMG/M
3300018028\|Ga0184608_10327058	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300018072\|Ga0184635_10061393	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300018073\|Ga0184624_10368300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300018076\|Ga0184609_10232268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300018422\|Ga0190265_11630076	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300018429\|Ga0190272_10872885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300018465\|Ga0190269_10923699	Not Available	648	Open in IMG/M
3300019361\|Ga0173482_10500385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300019377\|Ga0190264_12084134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	523	Open in IMG/M
3300019767\|Ga0190267_11393105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300022756\|Ga0222622_10594080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300025927\|Ga0207687_10391334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300025934\|Ga0207686_11441976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025936\|Ga0207670_10513492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300025937\|Ga0207669_11175926	Not Available	649	Open in IMG/M
3300025941\|Ga0207711_11971982	Not Available	527	Open in IMG/M
3300025961\|Ga0207712_10660164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	909	Open in IMG/M
3300025961\|Ga0207712_11339603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300025972\|Ga0207668_11746220	Not Available	562	Open in IMG/M
3300027561\|Ga0209887_1039431	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300027637\|Ga0209818_1245258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300027880\|Ga0209481_10196305	Not Available	1007	Open in IMG/M
3300028590\|Ga0247823_11500578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300028710\|Ga0307322_10053406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300028771\|Ga0307320_10073745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300028771\|Ga0307320_10318737	Not Available	619	Open in IMG/M
3300028796\|Ga0307287_10085353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300028796\|Ga0307287_10164210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300028796\|Ga0307287_10362012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300028799\|Ga0307284_10148795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300028807\|Ga0307305_10101320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300028809\|Ga0247824_10641639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300028819\|Ga0307296_10669953	Not Available	567	Open in IMG/M
3300028876\|Ga0307286_10226884	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300028878\|Ga0307278_10318505	Not Available	687	Open in IMG/M
3300028885\|Ga0307304_10110891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300030336\|Ga0247826_10514441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	906	Open in IMG/M
3300030511\|Ga0268241_10081225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300031170\|Ga0307498_10009878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1881	Open in IMG/M
3300031170\|Ga0307498_10472521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300031740\|Ga0307468_100620767	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031740\|Ga0307468_102149033	Not Available	539	Open in IMG/M
3300031901\|Ga0307406_10915768	Not Available	747	Open in IMG/M
3300031901\|Ga0307406_11263837	Not Available	643	Open in IMG/M
3300031901\|Ga0307406_11925994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300031903\|Ga0307407_11686207	Not Available	504	Open in IMG/M
3300032002\|Ga0307416_102914921	Not Available	572	Open in IMG/M
3300032126\|Ga0307415_100729759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300032205\|Ga0307472_102338977	Not Available	541	Open in IMG/M
3300032261\|Ga0306920_101215873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1088	Open in IMG/M
3300033290\|Ga0318519_10605475	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300033550\|Ga0247829_10168521	Not Available	1719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.97%
Host-Associated	Host-Associated	32.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.72%
Plants	Host-Associated → Plants	32.03%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.78%
Sediment	Environmental → Aquatic → Sediment	5.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.47%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.09%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.69%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.34%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05994881	2228664021	Soil	GSMALSIPLLIVAAIFTGLAGVIVICLALAVIAIATAR
ICChiseqgaiiDRAFT_22855511	3300000033	Soil	SLRRKREHQKEMVLGAMALSIPLXXXAAIFTGLAGVIVXXXALAVIAIATAR*
Ga0063455_1010200031	3300004153	Soil	KEMVLGSMAISIPLLAIAAIFTGIAGVIAVCVALAVIAITTAR*
Ga0062589_1025634432	3300004156	Soil	KRKRDHQKEMVLGAMGISIPLLGIAAVFAGLAGVIVVCAALAVIAVASSR*
Ga0062590_1018281733	3300004157	Soil	KEMVLGAMALSIPLFALAAIFTGLAGVIVVCGALAVIAIVTAR*
Ga0062595_1001064713	3300004479	Soil	LGAMALSIPLFALAAIFTGLAGVIVVCAALAVIAIATTR*
Ga0062594_1013285262	3300005093	Soil	SLKRKRDHQKEMVLGAMGISIPMLAIAAIFAGLAGVIVVCAALAVIAVVASR*
Ga0062594_1017998842	3300005093	Soil	QSLRRKREHQKEMVLGAMALSIPLFAMAAIFTGLAGVIVVCAALGVIAIVASR*
Ga0062594_1020351132	3300005093	Soil	LILGAMGISIPLLAIAAIFTGLAGVIVVCAALAVIAYVSTR*
Ga0066678_106585061	3300005181	Soil	EQALKRKRDHQREMVLGGMAISVPLFALAAIFVGLAGILVVCGALAVIAIVSTRS*
Ga0070683_1014120173	3300005329	Corn Rhizosphere	REHQKEMVLGSMGVGVPLLLIAAIFTGFAGVLVVSAAVALIAVVSAIRA*
Ga0070683_1019661501	3300005329	Corn Rhizosphere	HQKEMVLGAMGISIPMLAIAAIFAGLAGVIVVCAALAVIAVASSR*
Ga0070680_1014604702	3300005336	Corn Rhizosphere	KREHQKEMVLGSIALSIPLFAMAAIFTGLAGVIVVCAALGVIAIVTSR*
Ga0070674_1012811592	3300005356	Miscanthus Rhizosphere	KREHQKEMVLGAMALSIPLFAMAAIFTGLAGVIVVCAALVVIAVVASR*
Ga0070705_1001693633	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RKEMVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAVATAR*
Ga0070700_1007095262	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	REHQKEMVLGSMAISIPLLAIAAAFTGLAGVIAVCVALVAIAILTNRG*
Ga0068867_1015904142	3300005459	Miscanthus Rhizosphere	MVLGAMALSIPLFAMAAIFTGLAGVIVVCAALAVIAVVASR*
Ga0068854_1016765171	3300005578	Corn Rhizosphere	RKRDHQKEMVLGAMGISIPMLAIAAIFAGLAGVIVVCAALAVIAVASSR*
Ga0070702_1008982931	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	WSSGDRGWALQQQREHQKETILGSMAISIPLFAIAAVFAGFPGVVAVLVALVIIAVVSTKT*
Ga0066905_1004741921	3300005713	Tropical Forest Soil	QSLRRKREHQKEMVLGSMGLSIPLLLVAAIFTGLAGVIVVCGALAVIAIATARS*
Ga0081455_100781721	3300005937	Tabebuia Heterophylla Rhizosphere	EMVRGAMGISVPLLALAAIFTGVAGVVVVCSALVLIAVVSAR*
Ga0081455_102155734	3300005937	Tabebuia Heterophylla Rhizosphere	MGIAIPLLAIAAIFTGLAGVIVVCAALAVVVVAGTR*
Ga0081539_104283072	3300005985	Tabebuia Heterophylla Rhizosphere	QSEMALKRKRDHQKEMVLGGMAISVPLMAIAAIFTGLPGVVAVCLALAVIAIVSARDD*
Ga0066652_1014157072	3300006046	Soil	MGISIPLLAIAAIFTGLAGVIVVCAALAVIAVVSAR*
Ga0070715_107437712	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EDERALQQRRDHQKEMVLGAMGISVPLLAIAAIFTGLAGVVVVCAALAVIALVSAR*
Ga0074053_100018713	3300006575	Soil	KEMVLGAMALSIPLVIVAAIFTGLAGVIVVCGALAVIAIVTAR*
Ga0074053_114941392	3300006575	Soil	HQKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAVIAIATAR*
Ga0074062_100191571	3300006606	Soil	QKEMVLGAMALSIPLVIVAAIFTGLAGVIVVCGALAVIAIVTAR*
Ga0075428_1005987761	3300006844	Populus Rhizosphere	EMVLGAMALSIPLMAIAAIFTGLAGVIAVCAAIAVIAIVTARQS*
Ga0075430_1005439353	3300006846	Populus Rhizosphere	TREREKALKHKREHQQEMVLGAMGISIPLLALAAIFTGLAGVIVVCSALVLIAVVSAR*
Ga0075433_106306972	3300006852	Populus Rhizosphere	KRKREHQKEMVLGAMAISIPLLAIAAIFTGLAGVIAVCAALAVIAIASRR*
Ga0075420_1009046702	3300006853	Populus Rhizosphere	SIPLMAIAAIFTGLAGVIAVCAAIAVVAIVTARQS*
Ga0079215_110127103	3300006894	Agricultural Soil	LGAMGISVPLFALAAIFTGLPGVLAVCAALAVIAITASR*
Ga0074063_100567551	3300006953	Soil	REHQKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAVIAIATAR*
Ga0074063_141706401	3300006953	Soil	ESEQSLRRKREHQKEMVLGAMALSIPLFALAAIFTGLAGVIVVCGALVVIAIVTAR*
Ga0075419_104039202	3300006969	Populus Rhizosphere	EKALKRKRDHQKEMVLGAMALSIPLMAIAAIFTGLAGVIAVCAAIGVVAIVTARQS*
Ga0111539_126849661	3300009094	Populus Rhizosphere	AMALSIPLMAIAAIFTGLAGVIAVCAAIGVVAIVTARQS*
Ga0105245_119697192	3300009098	Miscanthus Rhizosphere	LGSMAISIPLLAIAAIFTGLAGVIAVCVALVVIAAITARS*
Ga0075418_125015541	3300009100	Populus Rhizosphere	DREERALKRKRDHEKEMVLGSMAISVPLFAIAAVFTGLAGVVAVLVALVIIAAITARQD*
Ga0114129_111931731	3300009147	Populus Rhizosphere	HQKEMLLGAMGISVPLFVVAAIFTGLAGVIAVCVMLGVVAATTARSV*
Ga0075423_101952253	3300009162	Populus Rhizosphere	MVLGAMALSIPLFALAAIFTGLAGVIVVCGALAVIAIATAR*
Ga0075423_118255821	3300009162	Populus Rhizosphere	QREMVLGAMGISIPLLAIAAIFTGLAGVIVVCAALAVIAVVSAR*
Ga0105242_103214621	3300009176	Miscanthus Rhizosphere	KREHQKEMVLGAMALSIPLFALAAIFTGLAGVIVVCATLAVIAAVTSR*
Ga0105249_118798502	3300009553	Switchgrass Rhizosphere	REHQKEMVLASMALSIPLMAIAAIFTGLAGVITVCVALCVIAIVTSR*
Ga0126307_100555656	3300009789	Serpentine Soil	GSMGIAVPLLAIAAIFTGLPGVVAVCVALAVIAIVSSR*
Ga0126313_101447321	3300009840	Serpentine Soil	KEMVLGAMGISVPLFIFAAIFTGLAGVIAVCAVLGVIALATTRSP*
Ga0126313_107221531	3300009840	Serpentine Soil	MGVSIPFFVVAAIFTGLAGVIVVCAALVAIAVVSAR*
Ga0126313_118547452	3300009840	Serpentine Soil	ERALRQRREHQKELILGSMGIAVPLFVVAAIFTGLAGIIVVCAALAVIAIAATRAP*
Ga0126305_105833951	3300010036	Serpentine Soil	QKEMVLGAMAISVPLFIFAAIFTGLAGVIAVCAVLGVIALATTRSP*
Ga0126304_102596192	3300010037	Serpentine Soil	KEMVLGAMALSIPMLVVAGIFTGLAGVIVVCAALVTIAVVSSR*
Ga0126304_109977802	3300010037	Serpentine Soil	SIPLMAIAAIFTGLAGVIAVCVAIAVVAIVSARQS*
Ga0126309_102697353	3300010039	Serpentine Soil	LERKRDHQKEMVLGSMGIAIPLLAIAAIFTGLAGVIVVCAALAVIALATTRS*
Ga0126308_102642342	3300010040	Serpentine Soil	SMALGIPLMAIAAIFTGLAGVIVVCAAIVVVALATAR*
Ga0126306_101291262	3300010166	Serpentine Soil	NHQKEMVLGSMGIGVPFFVIAAIFTGLPGVIAVCVALVAIAVVTTRD*
Ga0126306_109160503	3300010166	Serpentine Soil	RALKRKRDHQREMVLGSMGISVPLLAIAAIFTGIEGVIAVCVALAVIAIVTAR*
Ga0126306_114633522	3300010166	Serpentine Soil	GAMGISVPLLAIAAIFTGLAGVLVVCGALAVIVYVSTR*
Ga0126306_116554741	3300010166	Serpentine Soil	LQKGVLLGAMGIPVPLLAIAAIFTGLAGVIAVCVALGLIAIVSARS*
Ga0134126_124334931	3300010396	Terrestrial Soil	EMVLGAMGISIPLLAIAAIFTGLAGVIVVCAALAVIAVASGR*
Ga0134121_102259121	3300010401	Terrestrial Soil	HQKEMVLGAMGISVPLLAVAAIFTGLAGVLVVCAALAVIAVATAR*
Ga0105246_108253721	3300011119	Miscanthus Rhizosphere	LKRKRDHQKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAVIAIATAR*
Ga0137424_10599521	3300011412	Soil	NEQALKRKREHQKEMVLGAMGISVPLFALAAIFAGLAGVIVVSLALVVIAVVSTR*
Ga0137366_103994372	3300012354	Vadose Zone Soil	MVLGAMGISVPVFVVAAIFTGLPGVLAICAVLAVIAIASSR*
Ga0157336_10077831	3300012477	Arabidopsis Rhizosphere	KREHQKEMVLGGMALSIPLFALAAIFTGLAGVIVVCGALVVIAIVTAR*
Ga0136614_107807881	3300012684	Polar Desert Sand	HQKEMVLGSMGISVPLLAFAAIFTGLPGVIVVCVALVVIAVVSSRS*
Ga0157305_100418833	3300012891	Soil	LGAMAISIPLFALAAVFAGLAGIIVVCGTLVVIAIASTRS*
Ga0157308_102365651	3300012910	Soil	KEMVLGAMAISIPLFALAAVFAGLAGIIVVCGTLVVIAIASTRS*
Ga0164299_108433922	3300012958	Soil	MVLGSMALSIPLFIGAAIFTGLAGVIVVCAALVVIA
Ga0164305_118251671	3300012989	Soil	KEMVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAVATAR*
Ga0163163_104525691	3300014325	Switchgrass Rhizosphere	KGADQFAIERKREHQKEMVLGSMAISIPLLAIAAIFTGLAGVIAVCVALVMIAAITARN*
Ga0157380_134860612	3300014326	Switchgrass Rhizosphere	ISIPLLAIAAIFTGLAGVIAVCVALVVIAAITARG*
Ga0132256_1005162993	3300015372	Arabidopsis Rhizosphere	IVGSMGISIPLLAIAAIFTGLAGVIGVCAALAVIAVVVSR*
Ga0132256_1031732471	3300015372	Arabidopsis Rhizosphere	RLSERKELDEKALKRRREHQKEMVLGSMGIGVPLLLIAAIFTGFAGVLVVSAAVTLIAVVSAIRA*
Ga0132256_1033648691	3300015372	Arabidopsis Rhizosphere	HQKEMVLGGMALSIPLFALAAIFTGLVGVIVVCSALVVIAVVTAS*
Ga0132255_1027122121	3300015374	Arabidopsis Rhizosphere	KEMVLGSMALSIPLLICAAIFTGLAGVIVVCAALVVIAVVTAR*
Ga0190266_108384111	3300017965	Soil	YIPLMAIAAIFTGLAGVIAVCVAIGVVAIVVTRQS
Ga0184604_101571141	3300018000	Groundwater Sediment	REMVLGAMAISIPLFAIAAIFVGVGGILVVCGALAVIAVVSTRS
Ga0184608_103270581	3300018028	Groundwater Sediment	KGKRALAHKREHQKEMTLGSMAISIPLFAIAAVFTGLAGVITVCAVLAVIAIVSSR
Ga0184635_100613933	3300018072	Groundwater Sediment	HQKEMVLGAMALSIPLFALAAIFTGLAGVIVVCGVLAVIAIVTSR
Ga0184624_103683001	3300018073	Groundwater Sediment	KREHQKEMVLGAMALSIPLFALAAIFTGLAGVIVVCGALAGVAIVTAR
Ga0184609_102322681	3300018076	Groundwater Sediment	VLGAMGISVPLFVVAAIFTGLAGVLAVCGMLAVIAITAARAR
Ga0190265_116300761	3300018422	Soil	SARELKRKREHQKEMVLGAMGISVPLMAIAAVFGGLPGIVAVCVALAVIAIVSAR
Ga0190272_108728852	3300018429	Soil	ERALKRRRDHQKEMVLGSMGISIPLFAIAAVFTGLPGVVAVCVALVVIALVSAR
Ga0190269_109236991	3300018465	Soil	QKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAVIVIASMR
Ga0173482_105003851	3300019361	Soil	QREMVLGSLAISIPLFAMAAIFTGLAGIIAVCVVLGVIAIASMRS
Ga0190264_120841342	3300019377	Soil	AISIPLFAIAAVFTGLAGVIAVCVVLAVIAITSARAR
Ga0190267_113931052	3300019767	Soil	RRNHQKEMVLGSMGISIPLLAIAAVFTGLAGVIAVCIALVLIAVVSSRG
Ga0222622_105940802	3300022756	Groundwater Sediment	LLESAQFPVMTDDAVKEMVLGSMAVSIPLLAIAAIFTGLPGVIAVCAALAVIAIASSRG
Ga0207687_103913342	3300025927	Miscanthus Rhizosphere	LGSMAISIPLLAIAAIFTGLAGVIAVCVALVVIAAITARS
Ga0207686_114419761	3300025934	Miscanthus Rhizosphere	RRRREHQKEMVLGAMALSIPLFALAAIFTGLAGVIVVCGALAVIAIVTSR
Ga0207670_105134921	3300025936	Switchgrass Rhizosphere	LGSMGISVPLLLFAEIFAGLAGIVVVCVALVAIAFIATRD
Ga0207669_111759262	3300025937	Miscanthus Rhizosphere	ALSIPLFAMAAIFTGLAGVIVVCAALVVIAVVASR
Ga0207711_119719822	3300025941	Switchgrass Rhizosphere	REHQKEMVLGAMALSIPLFAMAAIFTGLAGVIVVCAALVVIAVVASR
Ga0207712_106601643	3300025961	Switchgrass Rhizosphere	AERGGADQFAIERKREHQKEMVLGSMAISIPLLAIAAIFTGLAGVIAVCVALVVIAAITARG
Ga0207712_113396031	3300025961	Switchgrass Rhizosphere	SMALSIPLMAIAAIFTGLAGVITVCVALCVIAIVTSR
Ga0207668_117462201	3300025972	Switchgrass Rhizosphere	RDHQREMVLGSLAISIPLFAMAAIFTGLAGIIAVCVVLGVIAIASMRS
Ga0209887_10394313	3300027561	Groundwater Sand	KALERKREHQKEMVLGAMAISVPFFALAAIFTGLAGVIVVCAALVAIAVVTAR
Ga0209818_12452582	3300027637	Agricultural Soil	KRKQDHQKEMVLGSMAISIPLLAIAAIFTGLPGVVAVCVALAVIAIVSAR
Ga0209481_101963051	3300027880	Populus Rhizosphere	MGISIPLLALAAIFTGLAGVIVVCSALVVIAVVSAR
Ga0247823_115005782	3300028590	Soil	RRDHQKDMTLGAMAISIPLLAIAAVFTGLAGVIAVCVALAVIAIVTALQD
Ga0307322_100534061	3300028710	Soil	KEMVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAIATVR
Ga0307320_100737452	3300028771	Soil	MGISVPLFAIAAIFTGLAGVIAVCVMLAVIAIVSRR
Ga0307320_103187372	3300028771	Soil	DEQREKALSRKRAHQKEMVLGSMAISIPLMTIAAIFTGLAGVIAVCVAIAVVAIVAAR
Ga0307287_100853533	3300028796	Soil	AEERERSLERKREHQKEMVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAIATAR
Ga0307287_101642103	3300028796	Soil	SEQSLRRKREHQKEMVLGSMALSIPLFAVAAIFTGLAGIIVVCAALAVIAVVASR
Ga0307287_103620121	3300028796	Soil	LRRKREHQKEMVLGAMALSIPLLAIAAIFTGLAGVIVVCAALGVVAIATGR
Ga0307284_101487951	3300028799	Soil	SLERKREHQKEVVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAIATAR
Ga0307305_101013201	3300028807	Soil	QALKRKRDHQRDMVLGAMAISVPLFAMAAIFVGLAGILVVCGALAVIAIVSTRS
Ga0247824_106416391	3300028809	Soil	QKEMVLGSMGLAIPLLVVAAIFTGLAGVIVVCSAVVVIALASLR
Ga0307296_106699531	3300028819	Soil	MTDDAVKEMVLGSMAVSIPLLAIAAIFTGLPGVIAVCAALAVIAIASSRG
Ga0307286_102268841	3300028876	Soil	LAHKREHQKEMTLGSMAISIPLFAIAAVFTGLAGVITVCAVLAVIAIVSSR
Ga0307278_103185052	3300028878	Soil	EMVLGAMALSIPLFALAAIFTGLAGVIVVCAALAVIAIATAR
Ga0307304_101108911	3300028885	Soil	MVLGAMGISVPMLAVAAIFTGLAGVLVVCAALAVIAIATAR
Ga0247826_105144411	3300030336	Soil	MVLASMALSIPLMAIAAIFTGLAGVITVCVALCVIAVVTSR
Ga0268241_100812251	3300030511	Soil	KMRRDHQKEMVLGSMAIAIPLLAIAAIFTGLPGVIAVCVALAVIAIATAR
Ga0307498_100098784	3300031170	Soil	KRKREHQKEMVLGAMGISIPLLAIAAIFTGLAGVLVVCAALAIIAIATAR
Ga0307498_104725212	3300031170	Soil	HQKEMVLGSMAIAIPLLAIAAVFTGLAGVITVCVALVLIAIVSAR
Ga0307468_1006207672	3300031740	Hardwood Forest Soil	RPGGRSERSLKRKRDHQKEMVLGAMGISIPLLGIAAVFTGLAGVIVVCAALAVIALASRP
Ga0307468_1021490331	3300031740	Hardwood Forest Soil	KRDHQKEMVLGAMGISIPMLAIAAIFAGLAGVIVVCAALAVIAVVASR
Ga0307406_109157681	3300031901	Rhizosphere	DHQKEMVLGAMAISVPLFALAAIFAGLAGVIVVSSALVVIAVVSAR
Ga0307406_112638371	3300031901	Rhizosphere	GSMAISIPLFALAAVFTGLAGIIVVCVTLVAIAVATAR
Ga0307406_119259942	3300031901	Rhizosphere	LKRKRDHQKEMVLGSMGISIPLLAIAAVFTGLPGVIAVCLALAVIAIVSGRD
Ga0307407_116862071	3300031903	Rhizosphere	NHQKEMVLGSMAIAVPLLAIAAVFTGLPGVIAVCVALVAIAVVSSR
Ga0307416_1029149212	3300032002	Rhizosphere	KARREHQKEMILGAMGISVPLFVIAAIFVGLAGILVVCATLAVIAVVAGRTT
Ga0307415_1007297593	3300032126	Rhizosphere	REHQKEMVLGAMGISIPLLAIAAIFTGLAGVIAVCVALGVIAIATTFQR
Ga0307472_1023389771	3300032205	Hardwood Forest Soil	MGISVPMLAIAAIFTGLAGVLVVCAALAVIAIASSR
Ga0306920_1012158733	3300032261	Soil	TELTLGAMALSIPLLAIAAAFTGLAGVIVVCAALAVIAVTANR
Ga0318519_106054752	3300033290	Soil	RHRTELTLGAMALSIPLLAIAAAFTGLAGVIVVCAALAVIAVTANR
Ga0247829_101685211	3300033550	Soil	QKEMVLGSMAISIPLLAIAAIFTGLLGVVAVCVALAVIAIATTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065148

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences