Metagenome / Metatranscriptome Family F065140

Basic Information
Family ID	F065140
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	44 residues
Representative Sequence	TGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Number of Associated Samples	118
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.34 %
% of genes near scaffold ends (potentially truncated)	85.94 %
% of genes from short scaffolds (< 2000 bps)	89.06 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Unclassified (54.688 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (19.531 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.531 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.39% β-sheet: 0.00% Coil/Unstructured: 82.61%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF08714	Fae	27.34
PF13378	MR_MLE_C	7.81
PF07969	Amidohydro_3	7.03
PF00465	Fe-ADH	7.03
PF14833	NAD_binding_11	4.69
PF00221	Lyase_aromatic	3.91
PF01979	Amidohydro_1	3.91
PF03446	NAD_binding_2	3.91
PF02746	MR_MLE_N	3.12
PF01613	Flavin_Reduct	2.34
PF01343	Peptidase_S49	1.56
PF13594	Obsolete Pfam Family	1.56
PF12911	OppC_N	0.78
PF12850	Metallophos_2	0.78
PF13692	Glyco_trans_1_4	0.78
PF08352	oligo_HPY	0.78
PF00528	BPD_transp_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1795	Formaldehyde-activating enzyme (5,6,7,8-tetrahydromethanopterin hydrolyase)	Energy production and conversion [C]	27.34
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	7.03
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	7.03
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	7.03
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	7.03
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	6.25
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	3.91
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.12
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.34

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
All Organisms	root	All Organisms	45.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
cellular organisms	root	All Organisms → cellular organisms	45.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.09 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.34 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	7.03 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.34 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	2.34 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.34 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	1.56 %
Leifsonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.69 %
Nocardia tenerifensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	2.34 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.34 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	1.56 %
Leifsonia rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → Leifsonia rubra	0.78 %
Streptomyces antimycoticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102IU1FR	Not Available	542	Open in IMG/M
2189573001\|GZR05M102IH846	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005435\|Ga0070714_100097282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2587	Open in IMG/M
3300005436\|Ga0070713_101525296	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005445\|Ga0070708_100023879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5204	Open in IMG/M
3300005467\|Ga0070706_100027593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	5225	Open in IMG/M
3300005468\|Ga0070707_100008253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	9665	Open in IMG/M
3300005538\|Ga0070731_11079052	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005614\|Ga0068856_101170370	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005616\|Ga0068852_100279131	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300006028\|Ga0070717_11206168	Not Available	689	Open in IMG/M
3300006059\|Ga0075017_101069580	All Organisms → cellular organisms → Bacteria → Terrabacteria group	629	Open in IMG/M
3300006163\|Ga0070715_11048526	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006175\|Ga0070712_101528273	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006176\|Ga0070765_101748788	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006755\|Ga0079222_10719963	Not Available	795	Open in IMG/M
3300006804\|Ga0079221_11471309	Not Available	545	Open in IMG/M
3300006854\|Ga0075425_100755319	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006954\|Ga0079219_10310126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	984	Open in IMG/M
3300009148\|Ga0105243_10242545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1604	Open in IMG/M
3300009162\|Ga0075423_11255815	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009520\|Ga0116214_1205684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	741	Open in IMG/M
3300009545\|Ga0105237_11106682	Not Available	799	Open in IMG/M
3300009792\|Ga0126374_11863783	Not Available	505	Open in IMG/M
3300010366\|Ga0126379_11335217	Not Available	823	Open in IMG/M
3300010366\|Ga0126379_12752721	Not Available	588	Open in IMG/M
3300010371\|Ga0134125_12908514	Not Available	520	Open in IMG/M
3300010379\|Ga0136449_101023633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → Leifsonia rubra	1326	Open in IMG/M
3300010399\|Ga0134127_11740724	Not Available	699	Open in IMG/M
3300010876\|Ga0126361_10645468	Not Available	833	Open in IMG/M
3300010880\|Ga0126350_10053856	Not Available	1193	Open in IMG/M
3300012206\|Ga0137380_11511574	Not Available	556	Open in IMG/M
3300012210\|Ga0137378_11482838	Not Available	590	Open in IMG/M
3300012357\|Ga0137384_10320463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1287	Open in IMG/M
3300012473\|Ga0157340_1029311	Not Available	507	Open in IMG/M
3300012515\|Ga0157338_1061079	Not Available	566	Open in IMG/M
3300012927\|Ga0137416_11581790	Not Available	596	Open in IMG/M
3300012955\|Ga0164298_11608788	Not Available	512	Open in IMG/M
3300012958\|Ga0164299_11147040	Not Available	584	Open in IMG/M
3300012961\|Ga0164302_10143720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	1394	Open in IMG/M
3300013104\|Ga0157370_11034399	Not Available	743	Open in IMG/M
3300014838\|Ga0182030_10031538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9305	Open in IMG/M
3300015372\|Ga0132256_101838474	Not Available	713	Open in IMG/M
3300015374\|Ga0132255_100643836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	1570	Open in IMG/M
3300016294\|Ga0182041_10337718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300016341\|Ga0182035_11249810	Not Available	664	Open in IMG/M
3300016387\|Ga0182040_10204757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1453	Open in IMG/M
3300016404\|Ga0182037_11529682	Not Available	592	Open in IMG/M
3300017946\|Ga0187879_10063215	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300017946\|Ga0187879_10873071	Not Available	503	Open in IMG/M
3300018019\|Ga0187874_10309509	Not Available	642	Open in IMG/M
3300020002\|Ga0193730_1026471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1678	Open in IMG/M
3300020070\|Ga0206356_10906761	Not Available	618	Open in IMG/M
3300020582\|Ga0210395_11116709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300021180\|Ga0210396_11107661	Not Available	666	Open in IMG/M
3300021402\|Ga0210385_10976015	Not Available	651	Open in IMG/M
3300021402\|Ga0210385_11351295	Not Available	545	Open in IMG/M
3300021403\|Ga0210397_11310766	Not Available	562	Open in IMG/M
3300021420\|Ga0210394_11400096	Not Available	595	Open in IMG/M
3300021474\|Ga0210390_11216340	Not Available	607	Open in IMG/M
3300021478\|Ga0210402_10474637	Not Available	1162	Open in IMG/M
3300021478\|Ga0210402_10901960	Not Available	810	Open in IMG/M
3300024178\|Ga0247694_1020749	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300024288\|Ga0179589_10091942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1226	Open in IMG/M
3300025634\|Ga0208589_1115566	Not Available	625	Open in IMG/M
3300025905\|Ga0207685_10176009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300025906\|Ga0207699_10797009	Not Available	694	Open in IMG/M
3300025910\|Ga0207684_10308073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1365	Open in IMG/M
3300025913\|Ga0207695_10914821	Not Available	757	Open in IMG/M
3300025916\|Ga0207663_10449774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300025922\|Ga0207646_10149299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2108	Open in IMG/M
3300025922\|Ga0207646_10535494	Not Available	1054	Open in IMG/M
3300025922\|Ga0207646_11685982	All Organisms → cellular organisms → Bacteria → Terrabacteria group	545	Open in IMG/M
3300025935\|Ga0207709_10285245	Not Available	1221	Open in IMG/M
3300025945\|Ga0207679_10580703	Not Available	1008	Open in IMG/M
3300026899\|Ga0209326_1002002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1677	Open in IMG/M
3300026899\|Ga0209326_1006413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300026995\|Ga0208761_1009658	Not Available	811	Open in IMG/M
3300027096\|Ga0208099_1010335	Not Available	1231	Open in IMG/M
3300027570\|Ga0208043_1134989	Not Available	650	Open in IMG/M
3300027575\|Ga0209525_1043738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300027641\|Ga0208827_1001063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12316	Open in IMG/M
3300027826\|Ga0209060_10546787	Not Available	525	Open in IMG/M
3300027846\|Ga0209180_10477201	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300027869\|Ga0209579_10635875	Not Available	579	Open in IMG/M
3300027898\|Ga0209067_10768945	Not Available	561	Open in IMG/M
3300027908\|Ga0209006_10077796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2952	Open in IMG/M
3300028789\|Ga0302232_10605142	Not Available	538	Open in IMG/M
3300028877\|Ga0302235_10210022	Not Available	856	Open in IMG/M
3300028879\|Ga0302229_10196207	Not Available	924	Open in IMG/M
3300029943\|Ga0311340_10020276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	8323	Open in IMG/M
3300029951\|Ga0311371_10188044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3087	Open in IMG/M
3300029951\|Ga0311371_10976859	Not Available	1011	Open in IMG/M
3300029997\|Ga0302302_1090025	Not Available	1270	Open in IMG/M
3300030399\|Ga0311353_11068669	Not Available	672	Open in IMG/M
3300030494\|Ga0310037_10010275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	4558	Open in IMG/M
3300030520\|Ga0311372_12023481	Not Available	673	Open in IMG/M
3300030618\|Ga0311354_11336538	Not Available	641	Open in IMG/M
3300030730\|Ga0307482_1051353	Not Available	1004	Open in IMG/M
3300030739\|Ga0302311_10757362	Not Available	635	Open in IMG/M
3300031028\|Ga0302180_10344216	Not Available	757	Open in IMG/M
3300031543\|Ga0318516_10078251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300031573\|Ga0310915_10374972	Not Available	1010	Open in IMG/M
3300031718\|Ga0307474_10513903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300031719\|Ga0306917_11507880	Not Available	517	Open in IMG/M
3300031744\|Ga0306918_10348131	Not Available	1149	Open in IMG/M
3300031751\|Ga0318494_10105897	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1555	Open in IMG/M
3300031765\|Ga0318554_10099933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1630	Open in IMG/M
3300031799\|Ga0318565_10164742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1076	Open in IMG/M
3300031823\|Ga0307478_10190095	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300031832\|Ga0318499_10154729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300031912\|Ga0306921_11380274	Not Available	776	Open in IMG/M
3300031945\|Ga0310913_10298961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1135	Open in IMG/M
3300032010\|Ga0318569_10220450	Not Available	880	Open in IMG/M
3300032041\|Ga0318549_10363597	Not Available	652	Open in IMG/M
3300032064\|Ga0318510_10319813	Not Available	650	Open in IMG/M
3300032076\|Ga0306924_10063181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4117	Open in IMG/M
3300032160\|Ga0311301_10838109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1254	Open in IMG/M
3300032515\|Ga0348332_11649828	Not Available	625	Open in IMG/M
3300032770\|Ga0335085_12305627	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300032783\|Ga0335079_12175145	Not Available	530	Open in IMG/M
3300032828\|Ga0335080_11109501	Not Available	800	Open in IMG/M
3300032892\|Ga0335081_12082070	Not Available	602	Open in IMG/M
3300032892\|Ga0335081_12691151	Not Available	508	Open in IMG/M
3300032898\|Ga0335072_11710727	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032954\|Ga0335083_10335655	Not Available	1314	Open in IMG/M
3300032954\|Ga0335083_11025136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	648	Open in IMG/M
3300033818\|Ga0334804_007980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4432	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.06%
Host-Associated	Host-Associated	10.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.16%
Plants	Host-Associated → Plants	10.94%
Aquatic	Environmental → Aquatic	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.22%
Peat	Environmental → Terrestrial → Peat	10.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.91%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Sediment	Environmental → Aquatic → Sediment	1.56%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.78%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_07729410	2170459002	Grass Soil	SGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPVA
FD2_06604730	2189573001	Grass Soil	RMIRELVPFTQADGTLPADLEPLVELVIRGTLTPAV
Ga0070714_1000972824	3300005435	Agricultural Soil	TGRAYRMIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA*
Ga0070713_1015252961	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SGLGELGAGTGRAYRMIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA*
Ga0070708_1000238794	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRSRGTGHAYRMVRELVPFTQADDTLSADLEPVVELVARGDLTPAG*
Ga0070706_1000275933	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRSRGTGHAYRMVRELVPFTQADDTLPADLEPVVELVARGDLTPAG*
Ga0070707_1000082533	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MARRSRGAGHAYRMVRELVPFTQADDTLPADLEPVVELVARGDLAPAG*
Ga0070731_110790521	3300005538	Surface Soil	RALLGPGGPGELGLGTGRAYRMIRELVPFTAADGTLPADLEPVVDLVSRGGLTAAA*
Ga0068856_1011703701	3300005614	Corn Rhizosphere	PGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPVA*
Ga0068852_1002791311	3300005616	Corn Rhizosphere	RAPGQLGLGTGRAYRMVRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0070717_112061681	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRELVPFTRADDTLPADLEPVVELVARGDLTPAG*
Ga0075017_1010695801	3300006059	Watersheds	MIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA*
Ga0070715_110485261	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QLGLGTGRAYRMIRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0070712_1015282732	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GTGRAYRMIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA*
Ga0070765_1017487881	3300006176	Soil	GTARVYRMIRELVPFTHGDGTLPADLEPLVELVSRGDLTAVA*
Ga0079222_107199632	3300006755	Agricultural Soil	YRMIRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0079221_114713091	3300006804	Agricultural Soil	GRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA*
Ga0075425_1007553192	3300006854	Populus Rhizosphere	MIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA*
Ga0079219_103101263	3300006954	Agricultural Soil	YRMIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA*
Ga0105243_102425451	3300009148	Miscanthus Rhizosphere	RMVRELVPFTQADGTLPADLEPLIELVTMGTLTPAA*
Ga0075423_112558151	3300009162	Populus Rhizosphere	IDLRAPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA*
Ga0116214_12056843	3300009520	Peatlands Soil	MIRELVPFTQADGTLPADLEPLVELVIRGDLTPAA*
Ga0105237_111066822	3300009545	Corn Rhizosphere	GTGRAYRMVRELVPFTQADGTLPADLEPLIELVTMGTLTPAA*
Ga0126374_118637832	3300009792	Tropical Forest Soil	MIRELVPFTQADGTLPADLEPVVELVTRGVLTPAG*
Ga0126379_113352172	3300010366	Tropical Forest Soil	MIRELVPFTQADGTLPADLEPLVELVTRGTLTPVA*
Ga0126379_127527211	3300010366	Tropical Forest Soil	LGELGAGTGRAYRMIRELVPFTQADDTFPADLEPVVDLVTRGDLTPAA*
Ga0134125_129085142	3300010371	Terrestrial Soil	GTGRAYRMVRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0136449_1010236331	3300010379	Peatlands Soil	GQLGQGTGRAYRLTRELVPFTASTGTVPADLEPVVELITRGDLSSPDM*
Ga0134127_117407242	3300010399	Terrestrial Soil	APGQALGLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA*
Ga0126361_106454681	3300010876	Boreal Forest Soil	LGLGTGRAYRMIRELVPFTHADGTLPADLEPLVDLVTRGDLTPAA*
Ga0126350_100538563	3300010880	Boreal Forest Soil	IRELVPFTQSDGTLPADLEPLIALVTRGDLTSAA*
Ga0137380_115115741	3300012206	Vadose Zone Soil	MIRELVPFTQADGTFPADLEPVVDLVTRGDLTGAA*
Ga0137378_114828382	3300012210	Vadose Zone Soil	QLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA*
Ga0137384_103204631	3300012357	Vadose Zone Soil	GTGRAYRMIRELVPFTQADGTLPADLEPLVELVIRGTLTPAV*
Ga0157340_10293112	3300012473	Arabidopsis Rhizosphere	GRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA*
Ga0157338_10610792	3300012515	Arabidopsis Rhizosphere	RAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA*
Ga0137416_115817901	3300012927	Vadose Zone Soil	GRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAV*
Ga0164298_116087882	3300012955	Soil	MIRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0164299_111470402	3300012958	Soil	MIRELVPFMQADGILPADLEPVVDLVIRGVLTPAA*
Ga0164302_101437203	3300012961	Soil	LGTGRAYRMIRELVAVTHADGTLPGDLEPLGELVTMGTLTPVA*
Ga0157370_110343991	3300013104	Corn Rhizosphere	LRAPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLIELVTRGTLTPAA*
Ga0182030_1003153810	3300014838	Bog	VPDRRLGVAVQLGVGTGNAYRMIRELVPFTHGDGTLPADLEPLVELLSRGDLTVVA*
Ga0132256_1018384742	3300015372	Arabidopsis Rhizosphere	RMIRELVPFTHADGTLPADLEPLVELVTRGTLTPAA*
Ga0132255_1006438363	3300015374	Arabidopsis Rhizosphere	AYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA*
Ga0182041_103377182	3300016294	Soil	SVPDGQGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0182035_112498101	3300016341	Soil	LGLGTGRAYRMIRELVPFTQADGTFPADLEPLVELVTRGALTPAA
Ga0182040_102047572	3300016387	Soil	VPDGQGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0182037_115296822	3300016404	Soil	GTGRAYRMVRKLVPFTQADGTLPADLEPVVELVTRGDLNPPEPGR
Ga0187879_100632152	3300017946	Peatland	MIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0187879_108730712	3300017946	Peatland	GGLHGAAQLGLGTARVYRMIRELVPFTHGDSTLPADLEPLVELVCRGDLTAVA
Ga0187874_103095091	3300018019	Peatland	DGLGGLHGAAQLGLGTARVYRMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0193730_10264713	3300020002	Soil	PGESLGLGLGTGRVYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPGRLSSEDR
Ga0206356_109067612	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	GQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPVA
Ga0210395_111167093	3300020582	Soil	LGTGRAFRMIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA
Ga0210396_111076611	3300021180	Soil	APGQALGLGLGTGRAYRMVRELVPFTQADGTLPADLEPLIELVTRGTLTPAA
Ga0210385_109760152	3300021402	Soil	GQLGLGTARVYRMIRELVPFTHGDGTLPADLEPLVELVSRGDLTAVA
Ga0210385_113512953	3300021402	Soil	WMIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA
Ga0210397_113107661	3300021403	Soil	GLGTGRAYQMVRELVPFTQADGTLPADLEPLVELVSRGDLS
Ga0210394_114000963	3300021420	Soil	RAPGQSLGLGLGTGRAFRMIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA
Ga0210390_112163403	3300021474	Soil	LGLGTGRAFRMIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA
Ga0210402_104746371	3300021478	Soil	SGASQSLGLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGDLTPAAYPAATPG
Ga0210402_109019601	3300021478	Soil	GTGRAYRMIRELVPFTQADGTLPADLEPLVELVTGGILTSAA
Ga0247694_10207492	3300024178	Soil	DLRAPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA
Ga0179589_100919421	3300024288	Vadose Zone Soil	IDLRVSGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVEMVTRGTLTPVA
Ga0208589_11155661	3300025634	Arctic Peat Soil	GLGTGRAYRMIRELVPFTQADGTLPADLEPLVDLVTRGDLTPAA
Ga0207685_101760091	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AYRMVRELVPFTQADGTLPADLEPLIELVTRGTLTPAA
Ga0207699_107970092	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LNQAGMGQPGLGELGLGTGRAYRMIRELVPFMQADGILPADLEPVVDLVIRGVLTPAA
Ga0207684_103080731	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRSRGTGHAYRMVRELVPFTQADDTLPADLEPVVELVARGDLTPAG
Ga0207695_109148211	3300025913	Corn Rhizosphere	RAPGQLGLGTGRAYRMVRELVPFTQADGTLPADLEPLIELVTMGTLTPAA
Ga0207663_104497741	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LGLGLGTGRAYRMIRELVPFTQADGTLPADLEPLIELVTRGTLTPAA
Ga0207646_101492992	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARRSRGAGHAYRMVRELVPFTQADDTLPADLEPVVELVARGDLAPAG
Ga0207646_105354941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVRELVPFTQADGTLPADLEPLIELVTRGTLTPAA
Ga0207646_116859822	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LVRELVPFTQADGTLPADLEPLVELVSRGDLHPDSRIHR
Ga0207709_102852451	3300025935	Miscanthus Rhizosphere	RMVRELVPFTQADGTLPADLEPLIELVTMGTLTPAA
Ga0207679_105807032	3300025945	Corn Rhizosphere	SVSGPGVSGLGELGAGTGRAYRMIRELVPFTQADGTFPADLEPVVDLVTRGDLTPAA
Ga0209326_10020021	3300026899	Forest Soil	MIRELVPFTQADGTLPADLEPLVELVTMGTLTPAA
Ga0209326_10064131	3300026899	Forest Soil	MIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0208761_10096581	3300026995	Soil	GLGTGRAYRMIRELVPFTHADGTLPADLEPLVELVTRGTLTPAA
Ga0208099_10103353	3300027096	Forest Soil	APGQSLGLGLGTGRAFRMIRELVPFTQADGTLPADLEPLVELVSRGDLTPAA
Ga0208043_11349891	3300027570	Peatlands Soil	QLGLGTGRAFRMIRDLVPFTQADGTLPADLEPVVELVARGDLNPKAPPT
Ga0209525_10437382	3300027575	Forest Soil	ELGLGTGRAYRMLRELVPFTQSDGTLPADLEPVVDLISRGDLHPDTPAYGIA
Ga0208827_100106315	3300027641	Peatlands Soil	AYQMIRELVPFTQADGTLPADLEPLVDLVIQGDLTPSCSP
Ga0209060_105467871	3300027826	Surface Soil	MIRELVPFTQADGTLPADLEPLVERVSRGDLHPDSMTP
Ga0209180_104772011	3300027846	Vadose Zone Soil	GLGTERAYRMIRELVPFTQADGTLPADLEPLVELVTGGGLTPAA
Ga0209579_106358751	3300027869	Surface Soil	RALLGPGGPGELGLGTGRAYRMIRELVPFTAADGTLPADLEPVVDLVSRGGLTAAA
Ga0209067_107689452	3300027898	Watersheds	FRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0209006_100777965	3300027908	Forest Soil	GTARVYRMIRELVPFTQGEGTLPADLEPLVELVSRGDLTAVA
Ga0302232_106051421	3300028789	Palsa	LGGAGQLGLGTARVYRMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0302235_102100221	3300028877	Palsa	MIRELVPFTHGDGTLPADLEPLVELVSRGDLTAAA
Ga0302229_101962071	3300028879	Palsa	QLGLGTARVYRMIRVPFTHGDGTLPADLEPLVELVSRGDLTAAA
Ga0311340_1002027610	3300029943	Palsa	ARPGHRVYRMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0311371_101880441	3300029951	Palsa	YRMIRELVPFTQADGTLPADLEPLIALVTRGDLTSAA
Ga0311371_109768591	3300029951	Palsa	RAPGELGLGTGRAYRMIRELVPFTQSDGTLPADLEPLIALVTRGDLTSAA
Ga0302302_10900251	3300029997	Palsa	VYRMIRELVPFTHGDGTLPADLEPLVELVSRGDLTAVA
Ga0311353_110686692	3300030399	Palsa	RMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0310037_100102753	3300030494	Peatlands Soil	MIRELVPFTQADGTLPADLEPLVELVIRGDLTPAA
Ga0311372_120234811	3300030520	Palsa	GGLTGLGGAGQLGLGTARVYRMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0311354_113365381	3300030618	Palsa	LGLGTARVYRMIRELIPFTQGEGTLPADLEPLVELVCRGDLTAVA
Ga0307482_10513532	3300030730	Hardwood Forest Soil	QGELGQGTGRVYRMVREFVPFTQADGTLPADLEPLVALVSRGDLHPDTLAPR
Ga0302311_107573622	3300030739	Palsa	LGTARVYRMIRELVPFTHGDGTLPADLEPLVELVCRGDLTAVA
Ga0302180_103442161	3300031028	Palsa	MIRELVPFIHGDGTLPADLEPLVELVSRGDLTAVA
Ga0318516_100782513	3300031543	Soil	LGTGRAYRMVRELVPFTQADGTLPADLEPVVELVTRGDLNPPEPGR
Ga0310915_103749721	3300031573	Soil	TGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0307474_105139033	3300031718	Hardwood Forest Soil	QLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELITMGTLTPAA
Ga0306917_115078802	3300031719	Soil	GPDGTGQLGLGTGRAYRMIRELVPFTQAGGTLPADLEPLVELVTRGALTPAA
Ga0306918_103481311	3300031744	Soil	GLGTSRAYRMIRELVPFTQADGTLPADLEPLVELVARGTLTPAA
Ga0318494_101058972	3300031751	Soil	MIRELVPFTQADGTLPADLEPVVELVARGDLSAVTPAA
Ga0318554_100999331	3300031765	Soil	YRMVRKLVPFTQADGTLPADLEPVVELVTRGDLNPPEPGR
Ga0318565_101647421	3300031799	Soil	YRMIRELVPFTQADGTLPADLEPLVELVARGTLTSAA
Ga0307478_101900953	3300031823	Hardwood Forest Soil	GLGTGRAYQMVRELVPFTQADGTLPADLEPLVELVSRGALS
Ga0318499_101547293	3300031832	Soil	RSPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVARGTLTSAA
Ga0306921_113802741	3300031912	Soil	RMFRELVPFTQADGTLPADLEPLVELVARGTLTSAA
Ga0310913_102989613	3300031945	Soil	GRAYRMIRELVPFTQADGTLPADLEPLVELVARGTLTSAA
Ga0318569_102204501	3300032010	Soil	LRSPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVARGTLTPAA
Ga0318549_103635972	3300032041	Soil	EPGQLGLGTGRAYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0318510_103198132	3300032064	Soil	AYRMIRELVPFTQADGTLPADLEPLVELVTRGTLTPAA
Ga0306924_100631815	3300032076	Soil	YRMVRELVPFTQADGTLPADLEPVVELVTRGDLNPPEPGR
Ga0311301_108381092	3300032160	Peatlands Soil	GQLGQGTGRAYRLTRELVPFTASTGTVPADLEPVVELITRGDLSSPDM
Ga0348332_116498283	3300032515	Plant Litter	QSLGLGLGTGRAFRMIRELVPFTQADGTLPADLEPLVELVSRGDLMPAA
Ga0335085_123056272	3300032770	Soil	AQAIDLRSLGQLGLGTGRAYRMIRELVPFTQADGTFPADLEPLVELVTGGALTPAA
Ga0335079_121751452	3300032783	Soil	QLGLGTGRAYRMIRELVPFTQADSTLPADLEPVVELVTRGDLDLVTQAA
Ga0335080_111095011	3300032828	Soil	AAGPLGLGTDRAYRMTRELVPFTQAEGTLPADLEPLVELVIRGDLSQLAPAA
Ga0335081_120820702	3300032892	Soil	TGRAYRMIRELVPFMPAGGTLPADLEPVVDLVTRGVLTPAA
Ga0335081_126911511	3300032892	Soil	GTGRAYRMIRELVPFMPADGTLPADLEPVVDLVTRGVLTPAA
Ga0335072_117107271	3300032898	Soil	LGGGTGRAYQMVRDLIPFTHADGTLPADLEPVVDLVIRGTLGPDTMSPCSSPDPLCPS
Ga0335083_103356551	3300032954	Soil	MIRELVPFTRADDTLPADLEPVVELVARGDLNAVTPAA
Ga0335083_110251361	3300032954	Soil	PGQLGLGTGRAYRMIRELVPFTQADGTFPADLEPLVELVTGGALTPAA
Ga0334804_007980_3606_3776	3300033818	Soil	VPDRRLGVAVQLGVGTGNAYRMIRELVPFTHGDGTLPADLEPLVELVSRGDLTVVA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065140

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign