Metagenome Family F065129

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065129
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	77 residues
Representative Sequence	MPTTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMEHETLHTETT
Number of Associated Samples	92
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.88 %
% of genes near scaffold ends (potentially truncated)	29.69 %
% of genes from short scaffolds (< 2000 bps)	75.78 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.938 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (14.844 % of family members)
Environment Ontology (ENVO)	Unclassified (57.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.43% β-sheet: 0.00% Coil/Unstructured: 47.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00436	SSB	30.47
PF07221	GlcNAc_2-epim	8.59
PF13274	DUF4065	8.59
PF04956	TrbC	4.69
PF05101	VirB3	4.69
PF10412	TrwB_AAD_bind	2.34
PF01436	NHL	1.56
PF03135	CagE_TrbE_VirB	1.56
PF14384	BrnA_antitoxin	1.56
PF16694	Cytochrome_P460	0.78
PF08241	Methyltransf_11	0.78
PF07996	T4SS	0.78
PF07969	Amidohydro_3	0.78
PF04335	VirB8	0.78
PF00005	ABC_tran	0.78
PF03389	MobA_MobL	0.78
PF04773	FecR	0.78
PF00135	COesterase	0.78
PF04754	Transposase_31	0.78
PF12846	AAA_10	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	30.47
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	30.47
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	8.59
COG3702	Type IV secretory pathway, VirB3 component	Intracellular trafficking, secretion, and vesicular transport [U]	4.69
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	4.69
COG3451	Type IV secretory pathway, VirB4 component	Intracellular trafficking, secretion, and vesicular transport [U]	1.56
COG0507	ATPase/5Ã¢â‚¬â„¢-3Ã¢â‚¬â„¢ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.78
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.78
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG5464	Recombination-promoting DNA endonuclease RpnC/YadD	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.94 %
Unclassified	root	N/A	14.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.94 %
Unclassified	root	N/A	14.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.94 %
Unclassified	root	N/A	14.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.03 %
Unclassified	root	N/A	14.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17.97 %
Unclassified	root	N/A	14.06 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.06 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	13.28 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.91 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	2.34 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.06 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	13.28 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3.12 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	2.34 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Wenzhouxiangellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Wenzhouxiangellaceae	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.06 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	13.28 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	3.12 %
unclassified Rhodocyclaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae	2.34 %
Wenzhouxiangella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Wenzhouxiangellaceae → Wenzhouxiangella	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.06 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	13.28 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	3.12 %
Rhodocyclaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	2.34 %
unclassified Wenzhouxiangella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Wenzhouxiangellaceae → Wenzhouxiangella → unclassified Wenzhouxiangella	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.06 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	13.28 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	3.12 %
Rhodocyclaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	2.34 %
Wenzhouxiangella sp. XN24	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Wenzhouxiangellaceae → Wenzhouxiangella → unclassified Wenzhouxiangella → Wenzhouxiangella sp. XN24	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10125170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300003316\|rootH1_10024093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	6957	Open in IMG/M
3300003323\|rootH1_10043989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	5401	Open in IMG/M
3300005260\|Ga0074072_1000018	All Organisms → cellular organisms → Bacteria → Proteobacteria	97659	Open in IMG/M
3300005260\|Ga0074072_1064348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1028	Open in IMG/M
3300005329\|Ga0070683_100673680	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005332\|Ga0066388_100401206	All Organisms → cellular organisms → Bacteria → Proteobacteria	2016	Open in IMG/M
3300005332\|Ga0066388_100589381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300005335\|Ga0070666_10912704	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300005335\|Ga0070666_11487255	Not Available	506	Open in IMG/M
3300005337\|Ga0070682_100539211	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300005344\|Ga0070661_100420444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1059	Open in IMG/M
3300005344\|Ga0070661_101255177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	621	Open in IMG/M
3300005355\|Ga0070671_100000217	All Organisms → cellular organisms → Bacteria → Proteobacteria	38355	Open in IMG/M
3300005355\|Ga0070671_100070514	All Organisms → cellular organisms → Bacteria → Proteobacteria	2916	Open in IMG/M
3300005367\|Ga0070667_100389819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300005367\|Ga0070667_100620130	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300005466\|Ga0070685_10406727	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300005535\|Ga0070684_100196717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1836	Open in IMG/M
3300005535\|Ga0070684_101356882	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005539\|Ga0068853_100455488	All Organisms → cellular organisms → Bacteria → Proteobacteria	1203	Open in IMG/M
3300005547\|Ga0070693_100886673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	668	Open in IMG/M
3300005548\|Ga0070665_100090389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	3067	Open in IMG/M
3300005548\|Ga0070665_100712725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300005563\|Ga0068855_101074189	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300005563\|Ga0068855_101844221	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300005578\|Ga0068854_100591481	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300005598\|Ga0066706_11238354	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300005618\|Ga0068864_101561299	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300005842\|Ga0068858_100545332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300006164\|Ga0075441_10067915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300006358\|Ga0068871_101132091	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300009093\|Ga0105240_10106987	All Organisms → cellular organisms → Bacteria → Proteobacteria	3392	Open in IMG/M
3300009093\|Ga0105240_10882726	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300009093\|Ga0105240_10890863	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300009101\|Ga0105247_10240494	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300009174\|Ga0105241_10163170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1834	Open in IMG/M
3300009174\|Ga0105241_10966224	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300009174\|Ga0105241_11968710	Not Available	574	Open in IMG/M
3300009176\|Ga0105242_11058332	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300009177\|Ga0105248_10654090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300009545\|Ga0105237_10073363	All Organisms → cellular organisms → Bacteria → Proteobacteria	3415	Open in IMG/M
3300009545\|Ga0105237_10291796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1634	Open in IMG/M
3300009551\|Ga0105238_10110197	All Organisms → cellular organisms → Bacteria → Proteobacteria	2734	Open in IMG/M
3300009551\|Ga0105238_11496922	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300010046\|Ga0126384_10595116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300010362\|Ga0126377_12274770	Not Available	618	Open in IMG/M
3300010375\|Ga0105239_12944996	Not Available	555	Open in IMG/M
3300011119\|Ga0105246_10577087	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300012904\|Ga0157282_10080420	Not Available	871	Open in IMG/M
3300012909\|Ga0157290_10130460	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300012924\|Ga0137413_10134993	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300012924\|Ga0137413_10337076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300012927\|Ga0137416_10860692	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300012929\|Ga0137404_10792805	Not Available	860	Open in IMG/M
3300012929\|Ga0137404_11304861	Not Available	669	Open in IMG/M
3300012930\|Ga0137407_10053760	All Organisms → cellular organisms → Bacteria → Proteobacteria	3285	Open in IMG/M
3300012930\|Ga0137407_10305778	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300012930\|Ga0137407_11632499	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300012931\|Ga0153915_10120414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2814	Open in IMG/M
3300012944\|Ga0137410_10829291	Not Available	778	Open in IMG/M
3300013105\|Ga0157369_10135135	All Organisms → cellular organisms → Bacteria → Proteobacteria	2611	Open in IMG/M
3300014168\|Ga0181534_10001656	All Organisms → cellular organisms → Bacteria → Proteobacteria	14357	Open in IMG/M
3300014325\|Ga0163163_10195097	All Organisms → cellular organisms → Bacteria → Proteobacteria	2073	Open in IMG/M
3300014968\|Ga0157379_11190957	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300015053\|Ga0137405_1088647	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300015241\|Ga0137418_10470029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300015242\|Ga0137412_10341906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1166	Open in IMG/M
3300015245\|Ga0137409_10747183	Not Available	813	Open in IMG/M
3300015264\|Ga0137403_10081185	All Organisms → cellular organisms → Bacteria	3275	Open in IMG/M
3300015264\|Ga0137403_10268309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300020581\|Ga0210399_11019284	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300021086\|Ga0179596_10157523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300021168\|Ga0210406_10152485	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300021168\|Ga0210406_10367453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300021168\|Ga0210406_10512698	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300021168\|Ga0210406_10870498	Not Available	680	Open in IMG/M
3300021168\|Ga0210406_10993139	Not Available	625	Open in IMG/M
3300021178\|Ga0210408_10990913	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300021384\|Ga0213876_10780452	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300021405\|Ga0210387_11299200	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300021479\|Ga0210410_10703613	Not Available	892	Open in IMG/M
3300022897\|Ga0247764_1015091	All Organisms → cellular organisms → Bacteria → Proteobacteria	2529	Open in IMG/M
3300022911\|Ga0247783_1082043	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300023268\|Ga0247765_1045473	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300023270\|Ga0247784_1014679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Wenzhouxiangellaceae → Wenzhouxiangella → unclassified Wenzhouxiangella → Wenzhouxiangella sp. XN24	1812	Open in IMG/M
3300024288\|Ga0179589_10155094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300025900\|Ga0207710_10086727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300025903\|Ga0207680_10066583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2216	Open in IMG/M
3300025904\|Ga0207647_10019855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4512	Open in IMG/M
3300025911\|Ga0207654_11213992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	550	Open in IMG/M
3300025913\|Ga0207695_10024923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6713	Open in IMG/M
3300025913\|Ga0207695_10604863	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300025914\|Ga0207671_10165024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1717	Open in IMG/M
3300025914\|Ga0207671_10690686	Not Available	812	Open in IMG/M
3300025914\|Ga0207671_11098980	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300025924\|Ga0207694_10215417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1565	Open in IMG/M
3300025924\|Ga0207694_10564752	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300025941\|Ga0207711_10173435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1958	Open in IMG/M
3300025961\|Ga0207712_10466149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1074	Open in IMG/M
3300025961\|Ga0207712_11141874	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300025961\|Ga0207712_11378470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300026035\|Ga0207703_10013910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6273	Open in IMG/M
3300026078\|Ga0207702_10172455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1985	Open in IMG/M
3300026142\|Ga0207698_10185707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1846	Open in IMG/M
3300027669\|Ga0208981_1199027	Not Available	502	Open in IMG/M
3300027681\|Ga0208991_1064918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1101	Open in IMG/M
3300027714\|Ga0209815_1124650	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300027903\|Ga0209488_11095552	Not Available	544	Open in IMG/M
3300028047\|Ga0209526_10326730	Not Available	1033	Open in IMG/M
3300028379\|Ga0268266_10025572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5022	Open in IMG/M
3300028379\|Ga0268266_10912562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300028379\|Ga0268266_12376461	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300030521\|Ga0307511_10000278	All Organisms → cellular organisms → Bacteria → Proteobacteria	53690	Open in IMG/M
3300030521\|Ga0307511_10023330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5771	Open in IMG/M
3300030522\|Ga0307512_10356503	Not Available	641	Open in IMG/M
3300031231\|Ga0170824_103343846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1123	Open in IMG/M
3300031232\|Ga0302323_100127438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2495	Open in IMG/M
3300031507\|Ga0307509_10000002	All Organisms → cellular organisms → Bacteria → Proteobacteria	607551	Open in IMG/M
3300031507\|Ga0307509_10811707	Not Available	600	Open in IMG/M
3300031616\|Ga0307508_10021616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5851	Open in IMG/M
3300031726\|Ga0302321_100084603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3144	Open in IMG/M
3300031962\|Ga0307479_10055175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3826	Open in IMG/M
3300031962\|Ga0307479_10507326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1190	Open in IMG/M
3300033179\|Ga0307507_10474983	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300033180\|Ga0307510_10000007	All Organisms → cellular organisms → Bacteria → Proteobacteria	558582	Open in IMG/M
3300033180\|Ga0307510_10085434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3032	Open in IMG/M
3300034384\|Ga0372946_0360091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.12%
Environmental	Environmental	46.88%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.12%
Terrestrial	Environmental → Terrestrial	43.75%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.38%
Roots	Host-Associated → Plants → Roots	9.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.12%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Marine	Environmental → Aquatic → Marine	1.56%
Peat	Environmental → Terrestrial → Peat	1.56%
Rhizome	Host-Associated → Plants → Rhizome	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.94%
Loam	Environmental → Terrestrial → Soil → Loam	9.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	7.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	14.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.81%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	7.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.56%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030522	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_101251703	3300001661	Forest Soil	MSRNSTAGMFEECADELNDFINTLERYPHTVLAFALRAHLSGLLQALLAHGQWTRAQLTGFLEEMEHETLHPDGD*
rootH1_100240939	3300003316	Sugarcane Root And Bulk Soil	MPMISTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALSINDLWTREELITFMDDMKREALNPDDHS*
rootH1_100439893	3300003323	Sugarcane Root And Bulk Soil	MPMISTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLINNLWTREELITFMDDMKREVLIYSEA*
Ga0074072_100001876	3300005260	Soil	MPTTSTSGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLINDLWAREDLVTFMDDMKREALNPDEHS*
Ga0074072_10643482	3300005260	Soil	MPTPSVPGSFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEREALDQDAHPGTETERS*
Ga0070683_1006736801	3300005329	Corn Rhizosphere	MSDTDTTATFDECADELNDFIATLQKYPATVLASALRAHLCELLRALRIHGHWSAAEVATFLEEMASEISEDVDAGNR*
Ga0066388_1004012061	3300005332	Tropical Forest Soil	MSDVSELGTFEECADELNDFVGTLQRYPHTVLVFALRAHLCGLLQALRSRGQWSGAEAAVFVEELARELQAAIELGSS*
Ga0066388_1005893812	3300005332	Tropical Forest Soil	MSGNSTPGTFDECADEVNDFVARLDKYPHDVLVYVLRAHLCGLVQALRAQGQWSAEEVEAFFEELASEARQVDRD*
Ga0070666_109127042	3300005335	Switchgrass Rhizosphere	TSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT*
Ga0070666_114872551	3300005335	Switchgrass Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0070682_1005392113	3300005337	Corn Rhizosphere	MPMSSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS*
Ga0070661_1004204442	3300005344	Corn Rhizosphere	MPIIQTTGTFEECADELNDFINALERYPHTVLAFVLRAHLSGLLQALLINGLWTRDEVATFMQDMEQDALTVE*
Ga0070661_1012551772	3300005344	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS*
Ga0070671_10000021710	3300005355	Switchgrass Rhizosphere	MPSISTTGTFEECADELNDFVATLQRYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVTTFLEELEHEVLQSGGS*
Ga0070671_1000705143	3300005355	Switchgrass Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMTWNLGH*
Ga0070667_1003898192	3300005367	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT*
Ga0070667_1006201302	3300005367	Switchgrass Rhizosphere	MPKTQIPGTFEECADELNDFISTLERYPPTVLAFVLRAHLAGLLQALLISDLWTRDEVATFMEDMEHEVLTVE*
Ga0070685_104067271	3300005466	Switchgrass Rhizosphere	MPSISTTGTFEECADELNDFVATLQRYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVTTFLEELEHEVLQSGGS
Ga0070684_1001967171	3300005535	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETL
Ga0070684_1013568822	3300005535	Corn Rhizosphere	ELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEAFDTDSPAGIMSS*
Ga0068853_1004554883	3300005539	Corn Rhizosphere	EECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0070693_1008866731	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHSVLAFVLRAHLAGLLQALLFHGLWAREDVVTFLEDMEHETLDQHGNP*
Ga0070665_1000903891	3300005548	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLH
Ga0070665_1007127251	3300005548	Switchgrass Rhizosphere	CADELNDFVATLQRYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVTTFLEELEHEVLQSGGS*
Ga0068855_1010741892	3300005563	Corn Rhizosphere	TSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0068855_1018442212	3300005563	Corn Rhizosphere	MAITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS*
Ga0068854_1005914811	3300005578	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHSVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLHTETTWNAGH*
Ga0066706_112383541	3300005598	Soil	MPKPQTPGTFEECADELNDFLNTLERYPHTVLAFVLRAHLAGLLQALLINGLWTRDEVATFMGDMEHEVLTVE*
Ga0068864_1015612991	3300005618	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFL
Ga0068858_1005453323	3300005842	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRVHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT*
Ga0075441_100679152	3300006164	Marine	MPRISTPGTFEECADELNDFIATLQRYPPSVLAFVLRAHLSALLQALLLYGSWTPDEVMSFLLETQRDVLQPAAD*
Ga0068871_1011320912	3300006358	Miscanthus Rhizosphere	MPMSSTPGTFEECADELNDFINTLDRYPHTVLAFALRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT*
Ga0105240_101069874	3300009093	Corn Rhizosphere	VYGGAINLPEDSMPIIQTTGTFEECADELNDFINALERYPHTVLAFVLRAHLSGLLQALLINGLWTRDEVATFMQDMEQDALTVE*
Ga0105240_108827262	3300009093	Corn Rhizosphere	MVRRPKQARKIVMSRISTPGTFEECADELNDFIATLERYPPNVLAFVLRAHLAALLQALLLYGLWTSQEVAEFLLETQRDVLQPEAD*
Ga0105240_108908631	3300009093	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLHTETTWNAGH*
Ga0105247_102404941	3300009101	Switchgrass Rhizosphere	ECADELNDFLVTLDRYPHTVLAFALRAHLCGLLQALRTRGEWSEEDLAAFVEEMSVELREGTQA*
Ga0105241_101631703	3300009174	Corn Rhizosphere	VYVHNTHPTWRITMPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMERETLDQDGNP*
Ga0105241_109662242	3300009174	Corn Rhizosphere	VYGGAINLPEDSMPIIQTTGTFEECADELNDFINALERYPHTVLAFVLRAHLSGLLQALLINGLWTRDEVATF
Ga0105241_119687102	3300009174	Corn Rhizosphere	PTWRVVMSMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLGEMEHETLDTEAT*
Ga0105242_110583323	3300009176	Miscanthus Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDM
Ga0105248_106540904	3300009177	Switchgrass Rhizosphere	VYGHNTHPTWRITMPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERE
Ga0105237_100733634	3300009545	Corn Rhizosphere	VYGQSTQAAGKIVMSRISTPGTFEECADELNDFIATLERCPPNVLAFVLRAHLAALLQALLLYGLWTPDEVSNFLLETQQDVLQP*
Ga0105237_102917961	3300009545	Corn Rhizosphere	MPTTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMG
Ga0105238_101101975	3300009551	Corn Rhizosphere	PDTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS*
Ga0105238_114969222	3300009551	Corn Rhizosphere	VYVHNTHPTWRITMPMTSTPGTFEECADELNDFINTLDRYPPTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0126384_105951162	3300010046	Tropical Forest Soil	MSDVSELGTFEECADELNDFVATLQRYPHTVLVFALRAHLCGLLQALRSRGQWSGAEAAVFVEELARELQAAIELGSS*
Ga0126377_122747702	3300010362	Tropical Forest Soil	MSGLSELGTFEECADELNDFVGTLQRYPHTVLAFVLRAHLCGLLHTLCSRGQWSAGEAAAFVDELVIELREAADPRSP*
Ga0105239_129449961	3300010375	Corn Rhizosphere	MQITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNPGNSMGRS*
Ga0105246_105770871	3300011119	Miscanthus Rhizosphere	GTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS*
Ga0157282_100804202	3300012904	Soil	VYGHALIQPRKIAMSNESTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEAFDTDNQAGIMSS*
Ga0157290_101304602	3300012909	Soil	MSNESTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEALDTDYQAGVMSS*
Ga0137413_101349934	3300012924	Vadose Zone Soil	VYGQGIHPARKIVMPMISTPGTFEECADELNDFINTLQRYPPNVLAYVLRAHLAALLQALLLYGLWTPEEVTNFLLETQRDALQPEAD*
Ga0137413_103370761	3300012924	Vadose Zone Soil	MARNSTPGTFEECADELNDFINTLERYPHTLLAFALRAHLSGLLQALLLKGECTREEVTTFLQEMEHETLGSPTD*
Ga0137416_108606922	3300012927	Vadose Zone Soil	MASISTTGTFDECADELNDFIATLQKYPHTVLAFALRAHLCGLLQALRAHGQWSGEEVTTFLQELEHETLWPGQD*
Ga0137404_107928052	3300012929	Vadose Zone Soil	MAGISTTGTFEECTDELNDFIASLQQYPHTVLAFALRAHLCGLLQALQAHGMWSGAEVTAFLQELEHEALWPGEG*
Ga0137404_113048612	3300012929	Vadose Zone Soil	MASTSRTGTFEECADELNDFIATLQKYPHTVLAFVLRAHLCGLLQALQDQGLWSVEEITTFLQELEQETLQPGSG*
Ga0137407_100537605	3300012930	Vadose Zone Soil	MASTSRTGTFEECADELNDFIATLQKFPPTVLAFVLRAHLCGLLQALQDQGLWSVEEITTFLQELEQETLQPGSG*
Ga0137407_103057781	3300012930	Vadose Zone Soil	MASISTTGTFEECADELNDFVATLHSYPHTVLAFALRAHLCGLLQALRAHGQWSIEEITTFLEELEHETLEPDP
Ga0137407_116324992	3300012930	Vadose Zone Soil	MVGQSNPTEERFLMAGISTTGTFEECTDELNDFIASLQQYPHTVLAFALRAHLCGLLQALQAHGHWTGEEATIFLEELEEETLSPAAN
Ga0153915_101204142	3300012931	Freshwater Wetlands	MPNLSTTGTFEECADELNDFVGTLDGYPHTVLAFALRTHLSALLQALITQDRWSRAEVAAFIEELEHETLQLQQD*
Ga0137410_108292911	3300012944	Vadose Zone Soil	MSRVSTPGTFEECADELNDFINTLERYPHTLLAFVLRAHLSGLLQALVAQGLWTREEVATFLGDMEQESLHADTN*
Ga0157369_101351355	3300013105	Corn Rhizosphere	VYVHDTHPTWRITMQITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0181534_1000165611	3300014168	Bog	MVTHQPTWKVTMSMISTPGTFEECADELNDFINTLERYPHTVLAFVLRAHLTGLLQALLMQGLWTRDEVATFLMDLERDTLHSEAT*
Ga0163163_101950972	3300014325	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP*
Ga0157379_111909572	3300014968	Switchgrass Rhizosphere	VYGGAINLSEDSMPIIQTTGTFEECADELNDFINALERYPHTVLAFVLRAHLSGLLQALLINGLWTRDEVATFMQDMEQDALTVE*
Ga0137405_10886471	3300015053	Vadose Zone Soil	MVGQSNPTEERFLMAGISTTGTFEECTDELNDFIASLQQYPHTVLAFALRAHLCGLLQALQAHGMWSGAEVTAFLQELEHELEHEALWPGED*
Ga0137418_104700291	3300015241	Vadose Zone Soil	MASISTTGTFEECADELNDFVATLERYPHTMLAFALRAHLCGLLQALQAHGQWSLEEVATFLEELEHEVLERGR*
Ga0137412_103419061	3300015242	Vadose Zone Soil	MARNSTPGTFEECADELNDFINTLERYPHALLAFALRAHLSGLLQALLLKGECTREEVTTFLQEMEHETLGSPTD*
Ga0137409_107471831	3300015245	Vadose Zone Soil	DPERAMSRVSTPGTFEECADELNDFINTLERYPHTLLAFVLRAHLSGLLQALVAQGLWTREEVATFLGDMEQESLHADTN*
Ga0137403_100811852	3300015264	Vadose Zone Soil	MASTSRTGTFEECADELNDFIATLQKYPHTVLAFVLRAHLCGLLQALQDQGLWSVEEITTFLQELEQETLRPGAD*
Ga0137403_102683092	3300015264	Vadose Zone Soil	MVGQSNPTEERFLMAGISTTGTFEECTDELNDFIASLQQYPHTVLAFALRAHLCGLLQALQAHGMWSGAEVTAFLQELEHEALWPGEG*
Ga0210399_110192841	3300020581	Soil	MSRDSTPGTFEECADELNDFINTLERYPHTLLAFALRAHLSGLLQALLLHGRCTREEVTTFLQEMEHETL
Ga0179596_101575232	3300021086	Vadose Zone Soil	MSRVSTPGTFEECADELNDFINTLERYPHTLLAFVLRAHLSGLLQALVAQGLWTREEVATFLGDMEQESLHADTN
Ga0210406_101524855	3300021168	Soil	MSRDSTPGTFEECADELNDFINTLERYPHTLLAFALRAHLSGLLQALLLHGRCTREEVTTFLQEMEHETLHPDTQEPV
Ga0210406_103674532	3300021168	Soil	MARDPTPGTFEECADELNDFINTLERYPHALLAFALRAHLAGLLQALLLQGECTREEVTTFLQEMEQETLGSPTD
Ga0210406_105126983	3300021168	Soil	MASISTTGTFEECADELNDFVATLQKYPDTVLAFALRAHLCGLLQALRVHGQWSDAEVKEFLQELEHEALWPGES
Ga0210406_108704981	3300021168	Soil	MSGISIGATFEECADKLNDFVMTLEEYSHTVLAHALRAHLSGLLQALVAHGQWTATEVETFLDDLRHETLGD
Ga0210406_109931391	3300021168	Soil	VTSISTTGTFEECADELNDFVATLHSYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVATFLEELQHEALQSGRG
Ga0210408_109909131	3300021178	Soil	MVSISTTGTFEECADELNDFVATLQRYPHTALAFALRAHLCGLMQALLMHGQWSREEVTTFLQELEQETLWPDQS
Ga0213876_107804522	3300021384	Plant Roots	MPTVSTPDSFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEREALDQDG
Ga0210387_112992002	3300021405	Soil	MSKDSSPGTFEECADELNDFINTLERYPHTLLAFALRAHLSGLLQALRAHGSWTREEVTAFLDDMEQEILHPDDS
Ga0210410_107036132	3300021479	Soil	MASISTTGTFEECADELNDFVATLQKYPDTVLAFALRAHLCGLLQALQAHGQWSDGEVKEFLQELEHEALWPGQS
Ga0247764_10150913	3300022897	Plant Litter	MSNDSTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEAFDTDNQVGIMSS
Ga0247783_10820431	3300022911	Plant Litter	MSNDSTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEAFDTDNQAGIMSS
Ga0247765_10454733	3300023268	Plant Litter	MSNESTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEALDTDYQ
Ga0247784_10146791	3300023270	Plant Litter	MSNESTPGTFEECADELNDFINSLERYPPTVLAFVFRAHLVGLLQALLLYDLWTREEVATFLADMKQEALDTDYQAGVMSS
Ga0179589_101550941	3300024288	Vadose Zone Soil	EESMPKTQTPPGTFEECADELNDFINTLERYPHTVLAFVLRAHLAGLLQALLINDLWTRDEVATFMEDMEHEALAVE
Ga0207710_100867271	3300025900	Switchgrass Rhizosphere	MPISSTPGTFEECADELNDFINTLDRYPHTVLAFVLRVHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT
Ga0207680_100665835	3300025903	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT
Ga0207647_100198556	3300025904	Corn Rhizosphere	MPMSSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS
Ga0207654_112139921	3300025911	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMERETLDPDGNPDTSMGRS
Ga0207695_100249235	3300025913	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLHTETTWNAGH
Ga0207695_106048632	3300025913	Corn Rhizosphere	MSRISTPGTFEECADELNDFIATLERYPPNVLAFVLRAHLAALLQALLLYGLWTSQEVAEFLLETQRDVLQPEAD
Ga0207671_101650242	3300025914	Corn Rhizosphere	MPTTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIATFLEDMEHETLHTETT
Ga0207671_106906862	3300025914	Corn Rhizosphere	MSRISTPGTFEECADELNDFIATLERCPPNVLAFVLRAHLAALLQALLLYGLWTPDEVSNFLLETQQDVLQP
Ga0207671_110989802	3300025914	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHSVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLED
Ga0207694_102154171	3300025924	Corn Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP
Ga0207694_105647522	3300025924	Corn Rhizosphere	MPIIQTTGTFEECADELNDFINALERYPHTVLAFVLRAHLSGLLQALLINGLWTRDEVATFMQDMEQDALTVE
Ga0207711_101734351	3300025941	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMTWNLGH
Ga0207712_104661492	3300025961	Switchgrass Rhizosphere	MPMTSTPGTFEECADELNDFINTLDRYPPTVLAFVLRAHLAGLLQALLFHGLWTREDIVTFLEDMEHETLDQHGNP
Ga0207712_111418741	3300025961	Switchgrass Rhizosphere	TPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTETTQNAGH
Ga0207712_113784702	3300025961	Switchgrass Rhizosphere	STTGTFEECADELNDFVATLQRYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVTTFLEELEHEALQSGTDGAEG
Ga0207703_100139104	3300026035	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRVHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMT
Ga0207702_101724553	3300026078	Corn Rhizosphere	TFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMTWNLGH
Ga0207698_101857075	3300026142	Corn Rhizosphere	MPTTSTPGTFEECADELNDFINTLDRYPHTVLAFVLRAHLSGLLQALLFHGLWTREDIVTFLEDMEHETLHTEMTWNLGH
Ga0208981_11990271	3300027669	Forest Soil	MSRNSTAGMFEECADELNDFINTLERYPHTVLAFALRAHLSGLLQALLAHGQWTRAQLTGFLEEMEHETLHPDGD
Ga0208991_10649183	3300027681	Forest Soil	MASISTTGTFEECADELNDFINTLERYPHTVLAFALRAHLSGLLQALLAHGQWTRAQLTGFLEEMEHETLHPDG
Ga0209815_11246501	3300027714	Marine	MPRISTPGTFEECADELNDFIATLQRYPPSVLAFVLRAHLSALLQALLLYGSWTPDEVMSFLLETQRDVLQPAAD
Ga0209488_110955521	3300027903	Vadose Zone Soil	MASISTTGTFEECADELNDFVATLQRYPHTMLAFALRAHLCGLLQALQAHGQWSREEVATFLEELEHETLQPGQS
Ga0209526_103267302	3300028047	Forest Soil	MASISTTGTFEECADELNDFVATLQRYPHTMLAFALRAHLCGLLQALQAHGQWSREEVAIFLEELEHETLQPGQS
Ga0268266_100255721	3300028379	Switchgrass Rhizosphere	MPRKSTSGTFEECADELNDFIHTLQRYPPTVLAFVLRAHLAALLQALLLYELWTHDEIATFMQDMR
Ga0268266_109125621	3300028379	Switchgrass Rhizosphere	DELNDFVATLQRYPHTVLAFALRAHLCGLLQALQAHGQWSSAEVTTFLEELEHEALQSGTDGAEG
Ga0268266_123764612	3300028379	Switchgrass Rhizosphere	MPITSTPGTFEECADELNDFINTLDRYPHTVLAFVLRVHLSGLLQALLFHGLWTREDIVTFLEDMEHETL
Ga0307511_1000027837	3300030521	Ectomycorrhiza	MAGISTTGTFEECTDELNDFIASLQRYPHPVLAFALRAHLCGLLQALQAHGMCSGAEVTAFLQELEHEALWPGEG
Ga0307511_100233306	3300030521	Ectomycorrhiza	MSRVSTPGTFEECADELNDFINTLERYPHTLLAFALRAHLSGLLQALLVYGLWTREEVTTFLEDMEHEALHPDAS
Ga0307512_103565032	3300030522	Ectomycorrhiza	MPRISTPGTFEECADELNDFVNTLQRYPPNILAYVLRAHLAALLQALLLYDLWTRDEVATFMQDMQREALDPDDHAGSTEP
Ga0170824_1033438463	3300031231	Forest Soil	MSRDSTPGTFEECADELNDFINTLERYPHTLLAFALRAHLAGLLQALLAHGRCTREEVTTFLREMEHQTLHSESNRDLSDE
Ga0302323_1001274384	3300031232	Fen	MPRISTPGTFEECADELNDFINTLERYPYTVLAFSLRAHLAGLLQALLINGLWTRNEVATFLADMEHETLNPDDEGGLPNGGS
Ga0307509_1000000273	3300031507	Ectomycorrhiza	VVRFNRKDGMSGISTGATFEECADKLNDFIMTLEEYSHTVLAHALRAHLSGLLQALLAHGQWSSTEVETFLEELRDETLPE
Ga0307509_108117072	3300031507	Ectomycorrhiza	ECADKLNDFIMTLEEYSHTVLAHALRAHLSGLLQALLAHGQWSSTEVETFLEELWDETLP
Ga0307508_100216162	3300031616	Ectomycorrhiza	MAGISTTGTFEECTDELNDFIASLQRYPHTVLAFALRAHLCGLLQALQAHGMCSGAEVTAFLQELEHEALWPGEG
Ga0302321_1000846032	3300031726	Fen	MPRISTPGTFEECADELNDFINTLERYPYTVLAFALRAHLAGLLQALLINGLWTRNEVATFLADMEHETLNPDDEGGLPNGGS
Ga0307479_100551755	3300031962	Hardwood Forest Soil	MASISTTGTFEECADELNDFIATLQRYPDTVLAFALRAHLCGLLQALRVHGQWSDEEVKEFLQELEQEALWPGQS
Ga0307479_105073261	3300031962	Hardwood Forest Soil	MSDTSTPGTFEECADELNDFINTLDRYPPVVLAFALRAHLCGLLQALQIQGECSSAEIDTFLEEMAHEVRQQGES
Ga0307507_104749831	3300033179	Ectomycorrhiza	MAGISTTGTFEECTDELNDFIASLQRYPHPVLAFALRAHLCGLLQALQAHGMCSGAEVTAFLQELEHEALW
Ga0307510_10000007336	3300033180	Ectomycorrhiza	MPKTQTPGTFEECADELNDFMNTLERYPHTVLAFVLRAHLSGLLQALLMSGLWTRDEVATFMEDMEHEVLAVE
Ga0307510_100854345	3300033180	Ectomycorrhiza	MPRISTPGTFEECADELNDFVNTLQRYPPNVLAFVLRAHLAALLQALLLYGLWTRDEVATFMQDMQHEALDPDDQFDRTEP
Ga0372946_0360091_3_212	3300034384	Soil	TGTFEECADELNDFVATLQRYPHTVLAFALRAHLCGLLQALRAHGEWSGEEVTTFLEELQYETLQPGQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065129

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences