Metagenome Family F065105

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065105
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	41 residues
Representative Sequence	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGTTA
Number of Associated Samples	65
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.44 %
% of genes from short scaffolds (< 2000 bps)	97.66 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.594 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (40.625 % of family members)
Environment Ontology (ENVO)	Unclassified (64.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.438 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.35% β-sheet: 0.00% Coil/Unstructured: 92.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00685	Sulfotransfer_1	2.34
PF13469	Sulfotransfer_3	1.56
PF13385	Laminin_G_3	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.59 %
All Organisms	root	All Organisms	41.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.59 %
Viruses	superkingdom	All Organisms → Viruses	40.62 %
cellular organisms	root	All Organisms → cellular organisms	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.62 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001953\|GOS2231_1036223	Not Available	1548	Open in IMG/M
3300001961\|GOS2240_1058151	All Organisms → Viruses → Predicted Viral	1816	Open in IMG/M
3300001972\|GOS2216_10100281	All Organisms → Viruses → Predicted Viral	1768	Open in IMG/M
3300002176\|JGI24820J26691_1051152	Not Available	836	Open in IMG/M
3300002482\|JGI25127J35165_1026440	Not Available	1357	Open in IMG/M
3300005971\|Ga0066370_10076233	All Organisms → Viruses → Predicted Viral	1088	Open in IMG/M
3300005971\|Ga0066370_10256483	Not Available	620	Open in IMG/M
3300006166\|Ga0066836_10311719	Not Available	944	Open in IMG/M
3300006166\|Ga0066836_10583559	Not Available	677	Open in IMG/M
3300006737\|Ga0098037_1060492	All Organisms → Viruses → Predicted Viral	1351	Open in IMG/M
3300006751\|Ga0098040_1008610	All Organisms → Viruses → Predicted Viral	3604	Open in IMG/M
3300006751\|Ga0098040_1047581	All Organisms → Viruses → Predicted Viral	1338	Open in IMG/M
3300006754\|Ga0098044_1092643	All Organisms → Viruses → Predicted Viral	1243	Open in IMG/M
3300006754\|Ga0098044_1311725	Not Available	601	Open in IMG/M
3300006754\|Ga0098044_1386062	Not Available	528	Open in IMG/M
3300006928\|Ga0098041_1033543	All Organisms → Viruses → Predicted Viral	1673	Open in IMG/M
3300006928\|Ga0098041_1072247	All Organisms → Viruses → Predicted Viral	1113	Open in IMG/M
3300006928\|Ga0098041_1084599	All Organisms → Viruses → Predicted Viral	1024	Open in IMG/M
3300009593\|Ga0115011_10257536	All Organisms → Viruses → Predicted Viral	1311	Open in IMG/M
3300009593\|Ga0115011_10344617	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300009593\|Ga0115011_10361473	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300009593\|Ga0115011_10433186	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300009593\|Ga0115011_10726945	Not Available	815	Open in IMG/M
3300009593\|Ga0115011_11538649	Not Available	589	Open in IMG/M
3300009593\|Ga0115011_11707101	Not Available	564	Open in IMG/M
3300009790\|Ga0115012_10170707	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300009790\|Ga0115012_10259643	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300009790\|Ga0115012_10951433	Not Available	706	Open in IMG/M
3300009790\|Ga0115012_11299017	Not Available	616	Open in IMG/M
3300009790\|Ga0115012_12129986	Not Available	500	Open in IMG/M
3300012919\|Ga0160422_10733397	Not Available	632	Open in IMG/M
3300012920\|Ga0160423_10128865	All Organisms → Viruses → Predicted Viral	1782	Open in IMG/M
3300012928\|Ga0163110_10051195	All Organisms → Viruses → Predicted Viral	2602	Open in IMG/M
3300012928\|Ga0163110_10399924	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300012928\|Ga0163110_10568289	Not Available	872	Open in IMG/M
3300012928\|Ga0163110_11140098	Not Available	625	Open in IMG/M
3300012928\|Ga0163110_11313389	Not Available	584	Open in IMG/M
3300012928\|Ga0163110_11356714	Not Available	574	Open in IMG/M
3300012950\|Ga0163108_11115021	Not Available	509	Open in IMG/M
3300012952\|Ga0163180_10019776	All Organisms → Viruses → Predicted Viral	3833	Open in IMG/M
3300012952\|Ga0163180_10186073	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300012952\|Ga0163180_10194265	Not Available	1382	Open in IMG/M
3300012952\|Ga0163180_10244211	All Organisms → Viruses → Predicted Viral	1249	Open in IMG/M
3300012952\|Ga0163180_10450055	Not Available	952	Open in IMG/M
3300012952\|Ga0163180_11203494	Not Available	619	Open in IMG/M
3300012952\|Ga0163180_11819191	Not Available	517	Open in IMG/M
3300012953\|Ga0163179_10165597	All Organisms → Viruses → Predicted Viral	1665	Open in IMG/M
3300012953\|Ga0163179_10311601	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300012953\|Ga0163179_10335927	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300012953\|Ga0163179_10338275	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300012953\|Ga0163179_10343920	Not Available	1194	Open in IMG/M
3300012953\|Ga0163179_10365132	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300012953\|Ga0163179_10382434	All Organisms → Viruses → Predicted Viral	1137	Open in IMG/M
3300012953\|Ga0163179_11799964	Not Available	559	Open in IMG/M
3300017720\|Ga0181383_1033639	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
3300017720\|Ga0181383_1033677	Not Available	1380	Open in IMG/M
3300017720\|Ga0181383_1060062	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300017750\|Ga0181405_1188694	Not Available	501	Open in IMG/M
3300017764\|Ga0181385_1148271	Not Available	713	Open in IMG/M
3300017769\|Ga0187221_1121761	Not Available	786	Open in IMG/M
3300020255\|Ga0211586_1068541	Not Available	559	Open in IMG/M
3300020310\|Ga0211515_1023155	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300020310\|Ga0211515_1025776	All Organisms → Viruses → Predicted Viral	1176	Open in IMG/M
3300020310\|Ga0211515_1026479	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300020312\|Ga0211542_1053195	Not Available	745	Open in IMG/M
3300020367\|Ga0211703_10096432	Not Available	741	Open in IMG/M
3300020367\|Ga0211703_10125671	Not Available	655	Open in IMG/M
3300020367\|Ga0211703_10174666	Not Available	560	Open in IMG/M
3300020377\|Ga0211647_10063726	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300020379\|Ga0211652_10223184	Not Available	577	Open in IMG/M
3300020380\|Ga0211498_10090847	Not Available	1146	Open in IMG/M
3300020387\|Ga0211590_10293998	Not Available	513	Open in IMG/M
3300020394\|Ga0211497_10204174	Not Available	754	Open in IMG/M
3300020394\|Ga0211497_10364153	Not Available	531	Open in IMG/M
3300020395\|Ga0211705_10225701	Not Available	690	Open in IMG/M
3300020405\|Ga0211496_10185508	Not Available	770	Open in IMG/M
3300020410\|Ga0211699_10320075	Not Available	607	Open in IMG/M
3300020411\|Ga0211587_10058559	All Organisms → Viruses → Predicted Viral	1739	Open in IMG/M
3300020411\|Ga0211587_10077096	All Organisms → Viruses → Predicted Viral	1474	Open in IMG/M
3300020411\|Ga0211587_10107231	Not Available	1208	Open in IMG/M
3300020411\|Ga0211587_10112588	All Organisms → Viruses → Predicted Viral	1174	Open in IMG/M
3300020411\|Ga0211587_10131577	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300020411\|Ga0211587_10228362	Not Available	774	Open in IMG/M
3300020416\|Ga0211644_10411544	Not Available	559	Open in IMG/M
3300020421\|Ga0211653_10099612	All Organisms → Viruses → Predicted Viral	1292	Open in IMG/M
3300020421\|Ga0211653_10294373	Not Available	704	Open in IMG/M
3300020421\|Ga0211653_10320688	Not Available	671	Open in IMG/M
3300020421\|Ga0211653_10449634	Not Available	552	Open in IMG/M
3300020422\|Ga0211702_10067031	Not Available	989	Open in IMG/M
3300020436\|Ga0211708_10051945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1579	Open in IMG/M
3300020441\|Ga0211695_10302837	Not Available	588	Open in IMG/M
3300020445\|Ga0211564_10164577	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300020445\|Ga0211564_10240482	Not Available	895	Open in IMG/M
3300020449\|Ga0211642_10306015	Not Available	684	Open in IMG/M
3300020451\|Ga0211473_10312977	Not Available	806	Open in IMG/M
3300020451\|Ga0211473_10506169	Not Available	615	Open in IMG/M
3300020457\|Ga0211643_10140843	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
3300020459\|Ga0211514_10211627	Not Available	957	Open in IMG/M
3300020459\|Ga0211514_10367440	Not Available	708	Open in IMG/M
3300020461\|Ga0211535_10433691	Not Available	598	Open in IMG/M
3300020465\|Ga0211640_10186769	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300020465\|Ga0211640_10187549	Not Available	1170	Open in IMG/M
3300020465\|Ga0211640_10673700	Not Available	553	Open in IMG/M
3300020471\|Ga0211614_10221529	Not Available	822	Open in IMG/M
3300020471\|Ga0211614_10349796	Not Available	650	Open in IMG/M
3300020472\|Ga0211579_10157307	All Organisms → Viruses → Predicted Viral	1335	Open in IMG/M
3300020472\|Ga0211579_10165617	All Organisms → Viruses → Predicted Viral	1296	Open in IMG/M
3300020474\|Ga0211547_10630007	Not Available	529	Open in IMG/M
3300020475\|Ga0211541_10547468	Not Available	564	Open in IMG/M
3300022074\|Ga0224906_1070628	Not Available	1075	Open in IMG/M
3300022074\|Ga0224906_1186160	Not Available	571	Open in IMG/M
3300025096\|Ga0208011_1044190	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300025101\|Ga0208159_1031283	Not Available	1207	Open in IMG/M
3300025132\|Ga0209232_1083124	Not Available	1105	Open in IMG/M
3300026203\|Ga0207985_1134077	Not Available	569	Open in IMG/M
3300026263\|Ga0207992_1180348	Not Available	513	Open in IMG/M
3300027702\|Ga0209036_1129181	Not Available	742	Open in IMG/M
3300027830\|Ga0209359_10059997	All Organisms → Viruses → Predicted Viral	1508	Open in IMG/M
3300027830\|Ga0209359_10122685	All Organisms → Viruses → Predicted Viral	1116	Open in IMG/M
3300027906\|Ga0209404_10125402	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300027906\|Ga0209404_10179559	All Organisms → Viruses → Predicted Viral	1303	Open in IMG/M
3300027906\|Ga0209404_10194605	All Organisms → Viruses → Predicted Viral	1255	Open in IMG/M
3300027906\|Ga0209404_10283365	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300027906\|Ga0209404_10414634	Not Available	879	Open in IMG/M
3300029319\|Ga0183748_1124574	Not Available	551	Open in IMG/M
3300029792\|Ga0183826_1023449	Not Available	988	Open in IMG/M
3300031774\|Ga0315331_11077874	Not Available	542	Open in IMG/M
3300031775\|Ga0315326_10116980	All Organisms → Viruses → Predicted Viral	1740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	40.62%
Strait	Environmental → Aquatic → Marine → Strait	6.25%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	42.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	40.62%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	7.03%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.12%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	40.62%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	31.25%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	11.72%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.25%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	5.47%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.56%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.56%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001953	Marine microbial communities from Key West, Florida, USA - GS015	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300002176	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300020255	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556136-ERR599013)	Environmental	Open in IMG/M
3300020310	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)	Environmental	Open in IMG/M
3300020312	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)	Environmental	Open in IMG/M
3300020367	Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX556112-ERR599005)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300026203	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84 (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300027702	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2231_10362231	3300001953	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTEE
GOS2240_10581511	3300001961	Marine	MSEINASNFKKEHGDLAPDLVGVSELTSPYFFVPPSGNTAERPEDCEPGTLRF
GOS2216_101002813	3300001972	Marine	MSELNASNFKKEEGGQGPDIIGTTEFTSPYFMVPPSGTTAQRPSGC
JGI24820J26691_10511522	3300002176	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGN
JGI25127J35165_10264401	3300002482	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGDTASRPEDCEPG
Ga0066370_100762332	3300005971	Marine	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGTTAERP
Ga0066370_102564832	3300005971	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTA
Ga0066836_103117191	3300006166	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGTTA
Ga0066836_105835592	3300006166	Marine	MSELNASNLRKEHGNEGPDLVGLTELTSPYFMVPPSGTTAERPQNPQ
Ga0098037_10604923	3300006737	Marine	MSEINSSNFKKEHGDLAPDLVGVSELTSPYFFVPPSGNTAERPEDC
Ga0098040_10086106	3300006751	Marine	MSELNASNLRKEQGNEGPDLVGVTELTSPYFMVPPSGTTAERPQNPQKGT
Ga0098040_10475811	3300006751	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYYMVPPSGTTV
Ga0098044_10926431	3300006754	Marine	MSELNASNLRKEHGNEGPDLVGLTELTSPYFMVPPSGSTGDRPQN
Ga0098044_13117251	3300006754	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYFMVPPSGTTAERP
Ga0098044_13860621	3300006754	Marine	MSELNASNLRKEHGNEGPDLVGLTELTSPYFMVPPSGSTG
Ga0098041_10335433	3300006928	Marine	MSELNASNLRKEQGNEGPDLVGLTELTSPYYMVPPSG
Ga0098041_10722472	3300006928	Marine	MSELNASNLRKEKGNEGPDLVGLTELTSPYYMVPPSGSTG
Ga0098041_10845991	3300006928	Marine	MSEFNASNFKKEEGGQGPDLVGTTEFTSPYFMVPPSGTTAQRPSG
Ga0115011_102575361	3300009593	Marine	MSELNASNLRKEQGNEGPDLVGVTELTSPYYMVPPS
Ga0115011_103446172	3300009593	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPSGT
Ga0115011_103614732	3300009593	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYYMVPPSG
Ga0115011_104331862	3300009593	Marine	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSG
Ga0115011_107269452	3300009593	Marine	MSELNASNLRKEQGNEGPDLVGLTEVTSPYYMVPRSGTTAERPQNP
Ga0115011_115386492	3300009593	Marine	MSELNASNLRKEQGNEGPDLVGLTELTSPYFMVPPSGNTAQRPQNPQ
Ga0115011_117071012	3300009593	Marine	MSELNASNLRKEQGNEGPDLVGITELTSPYYMVPPS
Ga0115012_101707071	3300009790	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYYMVPP
Ga0115012_102596432	3300009790	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYYMVPPSGTTA
Ga0115012_109514331	3300009790	Marine	MSELNASNLRKEHGNEGPDLVGLTELTSPYYMVPPSGTTAERP
Ga0115012_112990172	3300009790	Marine	MSELNASNLRKEQGNEGPDLVGVTELTSPYFMVPPSGTTGERPQNP
Ga0115012_121299862	3300009790	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYYMVPPSGT
Ga0160422_107333972	3300012919	Seawater	MSEFQASNFKKENGGAPDLLGKTELTSPYFFVPPSGDTASRP
Ga0160423_101288651	3300012920	Surface Seawater	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPEDCEP
Ga0163110_100511954	3300012928	Surface Seawater	MSEINSSNFKKEHGDLAPDLVGVTDLTSPYFFVPPSGNTAERPED
Ga0163110_103999242	3300012928	Surface Seawater	MSEFQSSNFKKENGGTPDLLGKTELTSPYFFVPPSG
Ga0163110_105682892	3300012928	Surface Seawater	MSEFQASNFKKEQGGGASDLAGVTGLTSPYFFVPPSGTTAERPQSCSVGT
Ga0163110_111400981	3300012928	Surface Seawater	MMSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAE
Ga0163110_113133891	3300012928	Surface Seawater	MSEFQASNFKKAQGGGAPDIVGKVEFTSPYFFVPPSGTTAERPQS
Ga0163110_113567142	3300012928	Surface Seawater	MSEFQASNFKRNQGGSAPNIVGKVEFASPYFFVPPSGTTAERP
Ga0163108_111150212	3300012950	Seawater	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPSGTT
Ga0163180_100197764	3300012952	Seawater	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGDTASRP
Ga0163180_101860731	3300012952	Seawater	MSEFNASNFKKEEGGQGSDLIGTTQFTSPYFMVPPSGTTAQRPSGCAPGT
Ga0163180_101942652	3300012952	Seawater	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAER
Ga0163180_102442112	3300012952	Seawater	MSEFNASNFKKEEGGQGPDIIGTTEFTSPYFMVPPS
Ga0163180_104500551	3300012952	Seawater	MSEFNASNFKKEEGGQGPDLIGTTEFTSPYFMVPPSGTTAQRPSGCA
Ga0163180_112034942	3300012952	Seawater	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSG
Ga0163180_118191912	3300012952	Seawater	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGDTASRPEDCEP
Ga0163179_101655973	3300012953	Seawater	MSELNASNLRKEQGNEGPDLVGTTELTSPYFMVPPSGTTA
Ga0163179_103116012	3300012953	Seawater	MSEFNASNFKKEEDGQGPDLCGVTELTSPYFMVPPSGT
Ga0163179_103359271	3300012953	Seawater	MSEFNASNFKKEEGGQGPDIIGTTEFTSPYFMVPPSGTTAQ
Ga0163179_103382752	3300012953	Seawater	MSEFNASNFKKEEGGQGPDLCGVTELTSPYFMVPPSG
Ga0163179_103439201	3300012953	Seawater	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGD
Ga0163179_103651321	3300012953	Seawater	MSEINSPNFKKEHGDLAPDLVGVSELTSPYFFVPPSGTTAERPEDCEPGTL
Ga0163179_103824342	3300012953	Seawater	MSEFNASNFKKEEGGQGPDIIGTTELTSPYFMVPPSGT
Ga0163179_117999641	3300012953	Seawater	MSEFQASNFKKENGGTPNLVGKTELTSPYFFVPPS
Ga0181383_10336391	3300017720	Seawater	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGTTAERPQSCAP
Ga0181383_10336773	3300017720	Seawater	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPS
Ga0181383_10600622	3300017720	Seawater	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTGER
Ga0181405_11886941	3300017750	Seawater	MSEFNASNFKKEEGGQGPDLCGVTELTSPYFMVPPSGTTAERPQIP
Ga0181385_11482712	3300017764	Seawater	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPSDC
Ga0187221_11217612	3300017769	Seawater	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAERPE
Ga0211586_10685411	3300020255	Marine	MSELNASNLRKEQGNEGPDLVGLTELTSPYYMVPPSGTTAERPQNPQ
Ga0211515_10231551	3300020310	Marine	MSEFNASNFKKEEGGQGPDLCGVTELTSPYFMVPP
Ga0211515_10257761	3300020310	Marine	MSEFNASNFKKEEGGQGPDIIGTTELTSPYFMVPPSGTTAQ
Ga0211515_10264791	3300020310	Marine	MSELNASNFKKEEGGQGPDLCGVTELTSPYFMVPP
Ga0211542_10531951	3300020312	Marine	MSELNASNLRKERGNEGPDLVGVTELTSPYFMVPP
Ga0211703_100964322	3300020367	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAERPEE
Ga0211703_101256712	3300020367	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPEDC
Ga0211703_101746661	3300020367	Marine	MSEFQSSNFKQENGGAPNIVGKTELTSSYFFVPPSGDTKSR
Ga0211647_100637263	3300020377	Marine	MSEFQASNFKKAQGGSAPNLVGKVEFTSPYFFVPPSGDTA
Ga0211652_102231841	3300020379	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTA
Ga0211498_100908472	3300020380	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTVERPE
Ga0211590_102939981	3300020387	Marine	MSEINSSNFKKEHGDLAPDLVGVTELASPYFFVPPSGNTA
Ga0211497_102041741	3300020394	Marine	MSELNVTNLRKEQGNEGPDLVGTTELTSPYFMVPP
Ga0211497_103641532	3300020394	Marine	MSEFQASNFNKENGGTPDLLGKTELTSPYFFVPPS
Ga0211705_102257012	3300020395	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYYMVPPSGT
Ga0211496_101855082	3300020405	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGDTA
Ga0211699_103200751	3300020410	Marine	MSEINASNFKKEHGDLAPDLVGVSELTSPYFFVPPR
Ga0211587_100585593	3300020411	Marine	MSEFNASNLRKEHGNEGPDLVGLTELTSPYYMVPPSGTT
Ga0211587_100770963	3300020411	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPHYMVPPSGTTAERPQNP
Ga0211587_101072312	3300020411	Marine	MSEINASNFKKEHGDLAPDLVGVTDLTSPYFFVPPS
Ga0211587_101125881	3300020411	Marine	MSELNASNLRKEHGNEGPDLVGLTELTSPYFMVPPSGTTAERPQ
Ga0211587_101315771	3300020411	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPHYMVPPSGTTAERPQNPQK
Ga0211587_102283621	3300020411	Marine	MSEINSSNFKKEHGDLAPDLVGVSELTSPYFFVPP
Ga0211644_104115441	3300020416	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTGERPDDCEPGTL
Ga0211653_100996122	3300020421	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYFMVPPSGTTEE
Ga0211653_102943731	3300020421	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPED
Ga0211653_103206881	3300020421	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPSGTTAQRPQNPQPGTLRF
Ga0211653_104496341	3300020421	Marine	MSELNASNLRKEQGNEGPDLVGVTELTSPYYMVPPSGNTA
Ga0211702_100670311	3300020422	Marine	MSEFQSSNFIKENGGTPDLLGKTELTSPYFFVPPSGDTASRPQS
Ga0211708_100519451	3300020436	Marine	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGDTK
Ga0211695_103028371	3300020441	Marine	MSEFQASNFKKENGGSPNLVGKTDLTSPYFFVPPSGDTANRPT
Ga0211564_101645771	3300020445	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPP
Ga0211564_102404821	3300020445	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPSGNTAERPQNPQ
Ga0211642_103060151	3300020449	Marine	MSELNASNFRKERGNEGPDLVGITTLTSQHYMVPP
Ga0211473_103129772	3300020451	Marine	MSEFNASNFKKEEGGQGSDLIGTTQFTSPYFMVPPSGTTAQRPAGCAPGTL
Ga0211473_105061691	3300020451	Marine	MSEFQASNFKKENGGTPNLVGKTELTSPYFFVPPSGDTASTPSS
Ga0211643_101408432	3300020457	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYFMVPPSGTT
Ga0211514_102116271	3300020459	Marine	MSEFNASNFKKEEGGQGPDLCGVTELTSPYFMVPPSGTTAQRPSGCA
Ga0211514_103674401	3300020459	Marine	MSEFNASNFKKEEDGQGPDIIGTTELTSPYFMVPPSGTTAQRPQDCAPGT
Ga0211535_104336912	3300020461	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGDTA
Ga0211640_101867692	3300020465	Marine	MSEFNASNFKKEEGGQGPDIIGTAELTSPYFMVPPSGTTAQRPAGCAPG
Ga0211640_101875491	3300020465	Marine	MSEFNASNFKKEEGGQGPDLCGTTELTSPYFMVPPSGTTAQRPSGCAPGT
Ga0211640_106737001	3300020465	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPSGNTAERP
Ga0211614_102215292	3300020471	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGDTAE
Ga0211614_103497961	3300020471	Marine	MSEINASNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAERPENCEAGT
Ga0211579_101573071	3300020472	Marine	MSELNASNLRKERGNEGPDLVGTTELTSPYFMVPPSGTTAERPQ
Ga0211579_101656171	3300020472	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGTTAERPQNPQK
Ga0211547_106300071	3300020474	Marine	MSEINASNFKKEHGDLAPDLVGITELTSPYFFVPPSGNTAERPEDCEAG
Ga0211541_105474682	3300020475	Marine	MSEFNASNFKKEEDGQGPDIIGTTELTSPYFMVPPSGTTAQ
Ga0224906_10706281	3300022074	Seawater	MSEINSSNFKKEHGDLAPDLVGVSELTSPYFFVPPSGT
Ga0224906_11861601	3300022074	Seawater	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPE
Ga0208011_10441902	3300025096	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGSTAERPQ
Ga0208159_10312831	3300025101	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGTTAERPSDCEPGTLR
Ga0209232_10831242	3300025132	Marine	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGDTAS
Ga0207985_11340772	3300026203	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAERPSDCEPG
Ga0207992_11803481	3300026263	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGSTAER
Ga0209036_11291811	3300027702	Marine	MSELNASNLRKEHGNEGPDLVGTTELTSPYFMVPPS
Ga0209359_100599973	3300027830	Marine	MSELNASNLRKEHGNQGPDLVGVTELTSPYFMVPPSGTTD
Ga0209359_101226852	3300027830	Marine	MSEFQASNFKKENGGTPDLLGKTELTSPYFFVPPSGTTAE
Ga0209404_101254023	3300027906	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYYMVPPS
Ga0209404_101795592	3300027906	Marine	MSELNASNLRKEHGNEGPDLVGVTELTSPYFMVPPSGTTSE
Ga0209404_101946052	3300027906	Marine	MSELNASNLRKEQGNEGPDLVGLTELTSPYYMVPPS
Ga0209404_102833652	3300027906	Marine	MSELNASNLRKEQGNEGPDLVGTTELTSPYYMVPPS
Ga0209404_104146341	3300027906	Marine	MSELNASNLRKEQGNEGPDLVGLTELTSPYFMVPPSGT
Ga0183748_11245741	3300029319	Marine	MSEINSSNFKKEHGDLAPDLVGVTELTSPYFFVPPSGNTAE
Ga0183826_10234492	3300029792	Marine	MSEINSSNFKKEHGDLAPDLIGVTELTSPYFFVPP
Ga0315331_110778741	3300031774	Seawater	MSELNASNLRKEHGNEGPDLVGLTELTSPYFMVPPSGT
Ga0315326_101169803	3300031775	Seawater	MSELNASNLRKEQGNEGPDLVGVTELTSPYFMVPPSGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences