Metagenome / Metatranscriptome Family F065102

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065102
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	40 residues
Representative Sequence	EILNLFFAELFVFNFGIILRSYTNIGIDLQPLLSLIKAE
Number of Associated Samples	100
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.438 % of family members)
Environment Ontology (ENVO)	Unclassified (67.969 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (81.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.22% β-sheet: 0.00% Coil/Unstructured: 44.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF05198	IF3_N	71.09
PF03129	HGTP_anticodon	24.22
PF07973	tRNA_SAD	1.56
PF00707	IF3_C	0.78
PF00012	HSP70	0.78
PF12695	Abhydrolase_5	0.78
PF12146	Hydrolase_4	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	71.88
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	24.22
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	24.22
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	24.22
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	24.22
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.22 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	20.31 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	20.31 %
Candidatus Pelagibacter sp. RS40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS40	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000238\|SI36aug09_100mDRAFT_1021361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	841	Open in IMG/M
3300000239\|SI36aug09_120mDRAFT_1088889	Not Available	512	Open in IMG/M
3300001940\|GOS2222_1012321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4288	Open in IMG/M
3300001956\|GOS2266_1041807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300001974\|GOS2246_10121902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1602	Open in IMG/M
3300002040\|GOScombined01_101892789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1674	Open in IMG/M
3300002040\|GOScombined01_101908164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1779	Open in IMG/M
3300002040\|GOScombined01_102072730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1867	Open in IMG/M
3300002040\|GOScombined01_104366340	Not Available	516	Open in IMG/M
3300005398\|Ga0066858_10184918	Not Available	601	Open in IMG/M
3300005522\|Ga0066861_10163011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	768	Open in IMG/M
3300005946\|Ga0066378_10124681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	801	Open in IMG/M
3300006166\|Ga0066836_10474962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	756	Open in IMG/M
3300006166\|Ga0066836_10747562	Not Available	591	Open in IMG/M
3300006334\|Ga0099675_1455110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1030	Open in IMG/M
3300006334\|Ga0099675_1649394	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006350\|Ga0099954_1540795	Not Available	616	Open in IMG/M
3300006413\|Ga0099963_1249887	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300008097\|Ga0111541_10266520	Not Available	728	Open in IMG/M
3300008097\|Ga0111541_10310170	Not Available	675	Open in IMG/M
3300008249\|Ga0105353_1153806	Not Available	535	Open in IMG/M
3300008625\|Ga0115653_1211725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300009008\|Ga0115649_1370747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300009049\|Ga0102911_1157139	Not Available	644	Open in IMG/M
3300009054\|Ga0102826_1072611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	826	Open in IMG/M
3300009104\|Ga0117902_1255930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1665	Open in IMG/M
3300009106\|Ga0117917_1121022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	858	Open in IMG/M
3300009109\|Ga0117922_1172947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	968	Open in IMG/M
3300009132\|Ga0118730_1308150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	806	Open in IMG/M
3300009172\|Ga0114995_10370760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	786	Open in IMG/M
3300009172\|Ga0114995_10674156	Not Available	565	Open in IMG/M
3300009193\|Ga0115551_1392588	Not Available	597	Open in IMG/M
3300009409\|Ga0114993_10315276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1188	Open in IMG/M
3300009409\|Ga0114993_10366145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1087	Open in IMG/M
3300009420\|Ga0114994_10646962	Not Available	691	Open in IMG/M
3300009420\|Ga0114994_10969153	Not Available	550	Open in IMG/M
3300009425\|Ga0114997_10328434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	840	Open in IMG/M
3300009436\|Ga0115008_10821613	Not Available	682	Open in IMG/M
3300009449\|Ga0115558_1385906	Not Available	548	Open in IMG/M
3300009481\|Ga0114932_10204713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1200	Open in IMG/M
3300009498\|Ga0115568_10057065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2035	Open in IMG/M
3300009498\|Ga0115568_10420411	Not Available	577	Open in IMG/M
3300009703\|Ga0114933_10101377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2022	Open in IMG/M
3300009703\|Ga0114933_10623086	Not Available	694	Open in IMG/M
3300009705\|Ga0115000_10142328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1600	Open in IMG/M
3300009705\|Ga0115000_10407592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	865	Open in IMG/M
3300011302\|Ga0138369_1089807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	921	Open in IMG/M
3300012950\|Ga0163108_10176040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1371	Open in IMG/M
3300012950\|Ga0163108_10877256	Not Available	579	Open in IMG/M
3300016739\|Ga0182076_1423770	Not Available	543	Open in IMG/M
3300017762\|Ga0181422_1013258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2743	Open in IMG/M
3300017779\|Ga0181395_1252430	Not Available	539	Open in IMG/M
3300017967\|Ga0181590_10603092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	751	Open in IMG/M
3300017967\|Ga0181590_10755877	Not Available	650	Open in IMG/M
3300018418\|Ga0181567_10508191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	787	Open in IMG/M
3300018876\|Ga0181564_10484860	Not Available	664	Open in IMG/M
3300020056\|Ga0181574_10323016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	929	Open in IMG/M
3300020194\|Ga0181597_10367425	Not Available	617	Open in IMG/M
3300020238\|Ga0211492_1068654	Not Available	640	Open in IMG/M
3300020259\|Ga0211633_1052536	Not Available	673	Open in IMG/M
3300020297\|Ga0211490_1089050	Not Available	509	Open in IMG/M
3300020340\|Ga0211594_1090265	Not Available	648	Open in IMG/M
3300020346\|Ga0211607_1084277	Not Available	636	Open in IMG/M
3300020362\|Ga0211488_10150536	Not Available	655	Open in IMG/M
3300020370\|Ga0211672_10259441	Not Available	537	Open in IMG/M
3300020372\|Ga0211683_10024607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2045	Open in IMG/M
3300020376\|Ga0211682_10183285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	817	Open in IMG/M
3300020376\|Ga0211682_10222363	Not Available	727	Open in IMG/M
3300020381\|Ga0211476_10193101	Not Available	722	Open in IMG/M
3300020418\|Ga0211557_10304410	Not Available	721	Open in IMG/M
3300020428\|Ga0211521_10264864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	770	Open in IMG/M
3300020428\|Ga0211521_10319182	Not Available	688	Open in IMG/M
3300020445\|Ga0211564_10216560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	948	Open in IMG/M
3300020445\|Ga0211564_10312720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	774	Open in IMG/M
3300020453\|Ga0211550_10302677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	749	Open in IMG/M
3300020454\|Ga0211548_10431983	Not Available	645	Open in IMG/M
3300020456\|Ga0211551_10084964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1482	Open in IMG/M
3300020456\|Ga0211551_10442583	Not Available	620	Open in IMG/M
3300020456\|Ga0211551_10590990	Not Available	527	Open in IMG/M
3300020461\|Ga0211535_10188930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	903	Open in IMG/M
3300020462\|Ga0211546_10689114	Not Available	513	Open in IMG/M
3300020465\|Ga0211640_10749396	Not Available	517	Open in IMG/M
3300020471\|Ga0211614_10524362	Not Available	525	Open in IMG/M
3300020476\|Ga0211715_10488778	Not Available	605	Open in IMG/M
3300020476\|Ga0211715_10648622	Not Available	516	Open in IMG/M
3300021065\|Ga0206686_1072377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1032	Open in IMG/M
3300021084\|Ga0206678_10146176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1198	Open in IMG/M
3300021092\|Ga0194122_10450174	Not Available	646	Open in IMG/M
3300021342\|Ga0206691_1862084	Not Available	665	Open in IMG/M
3300021443\|Ga0206681_10334245	Not Available	586	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10087518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1555	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10125379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1201	Open in IMG/M
3300024344\|Ga0209992_10216509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	807	Open in IMG/M
3300024344\|Ga0209992_10237136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	762	Open in IMG/M
3300024348\|Ga0244776_10320889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1051	Open in IMG/M
3300025438\|Ga0208770_1047241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	897	Open in IMG/M
3300025886\|Ga0209632_10490947	Not Available	563	Open in IMG/M
3300026261\|Ga0208524_1026195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS40	1818	Open in IMG/M
3300026321\|Ga0208764_10326668	Not Available	733	Open in IMG/M
3300026321\|Ga0208764_10378928	Not Available	667	Open in IMG/M
3300027752\|Ga0209192_10190597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	786	Open in IMG/M
3300027779\|Ga0209709_10019148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4540	Open in IMG/M
3300027801\|Ga0209091_10300034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	761	Open in IMG/M
3300027801\|Ga0209091_10311825	Not Available	740	Open in IMG/M
3300027801\|Ga0209091_10352054	Not Available	681	Open in IMG/M
3300027830\|Ga0209359_10212488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	869	Open in IMG/M
3300027830\|Ga0209359_10348036	Not Available	682	Open in IMG/M
3300027844\|Ga0209501_10347569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	895	Open in IMG/M
3300027849\|Ga0209712_10507716	Not Available	675	Open in IMG/M
3300028194\|Ga0257106_1053186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1524	Open in IMG/M
3300028194\|Ga0257106_1080917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1187	Open in IMG/M
3300028194\|Ga0257106_1314270	Not Available	510	Open in IMG/M
3300028197\|Ga0257110_1218768	Not Available	726	Open in IMG/M
3300028284\|Ga0257120_1028594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1677	Open in IMG/M
3300031143\|Ga0308025_1254836	Not Available	581	Open in IMG/M
3300031510\|Ga0308010_1296521	Not Available	555	Open in IMG/M
3300031630\|Ga0308004_10214112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	778	Open in IMG/M
3300031644\|Ga0308001_10019348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2964	Open in IMG/M
3300031659\|Ga0307986_10303488	Not Available	668	Open in IMG/M
3300031659\|Ga0307986_10306203	Not Available	664	Open in IMG/M
3300031695\|Ga0308016_10033497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2234	Open in IMG/M
3300031702\|Ga0307998_1235278	Not Available	604	Open in IMG/M
3300031785\|Ga0310343_10538248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	863	Open in IMG/M
3300032006\|Ga0310344_10795343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	802	Open in IMG/M
3300032011\|Ga0315316_10972620	Not Available	692	Open in IMG/M
3300032047\|Ga0315330_10554446	Not Available	687	Open in IMG/M
3300032048\|Ga0315329_10641634	Not Available	562	Open in IMG/M
3300032134\|Ga0315339_1109409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	868	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.44%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.78%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	34.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified	28.12%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.53%
Coastal	Environmental → Aquatic → Marine → Coastal	4.69%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.91%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.12%
Inlet	Environmental → Aquatic → Marine → Inlet	2.34%
Strait	Environmental → Aquatic → Marine → Strait	1.56%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.78%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	29.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	28.12%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.72%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.47%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.69%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.69%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.34%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.34%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.44%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	21.09%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.03%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.25%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.47%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.69%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.69%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.12%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.12%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.12%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.34%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.56%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.56%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.56%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.56%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.78%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.78%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.78%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.78%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000238	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m	Environmental	Open in IMG/M
3300000239	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 120m	Environmental	Open in IMG/M
3300001940	Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005946	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006350	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m	Environmental	Open in IMG/M
3300006413	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0025m	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300008625	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um	Environmental	Open in IMG/M
3300009008	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009054	Estuarine microbial communities from the Columbia River estuary - metaG S.737	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009106	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 295m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300011302	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 Surf_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300016739	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020238	Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX556004-ERR599068)	Environmental	Open in IMG/M
3300020259	Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX556041-ERR599103)	Environmental	Open in IMG/M
3300020297	Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX555970-ERR598979)	Environmental	Open in IMG/M
3300020340	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555960-ERR599119)	Environmental	Open in IMG/M
3300020346	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556057-ERR599069)	Environmental	Open in IMG/M
3300020362	Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX556035-ERR599049)	Environmental	Open in IMG/M
3300020370	Marine microbial communities from Tara Oceans - TARA_B100001029 (ERX556065-ERR599079)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020456	Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020476	Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021092	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m	Environmental	Open in IMG/M
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025438	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300028284	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032134	Ammonia-oxidizing marine archaeal communities from Pacific Ocean, United States - ASW #17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI36aug09_100mDRAFT_10213611	3300000238	Marine	ETLNLFFAELFVFNFGIITRSYTNIGIDLQPLLSLIKAE*
SI36aug09_120mDRAFT_10888892	3300000239	Marine	FFAELFVFNFGIITRSYTNIGIDLQPLLSLIKAE*
GOS2222_10123211	3300001940	Marine	LNLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAG*
GOS2266_10418072	3300001956	Marine	IITFPFADILNLFFAELFVFSFGIIEPGYTKNDINLQQLLKPTKAE*
GOS2246_101219023	3300001974	Marine	LPLADILNLFFAELFVFSFGIILRTYTKKGIILQPLLRLIKAELP*
GOScombined01_1018927893	3300002040	Marine	GMTLPLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLRLIKAELP*
GOScombined01_1019081644	3300002040	Marine	MTLPLADTLNLFFAELFVFSFGIILRTYTKKDIILQPLLRLIMAELP*
GOScombined01_1020727303	3300002040	Marine	ADILNLFFAELFVFSFGIILRTYTKKDIILQPLLRLIKAELP*
GOScombined01_1043663401	3300002040	Marine	TLPLADILNLFFAELFVFSFGIILRFYTKKDIILQPLLKLIKAELP*
Ga0066858_101849181	3300005398	Marine	PLAVILNLFFAELLVFNFGIIAGSYTNNNINLQPQLPPIEAG*
Ga0066861_101630111	3300005522	Marine	PLADILNLFFAELFVFSFGIIQRTYTKKDIILQPLLRLIKAELP*
Ga0066378_101246813	3300005946	Marine	ILNLFFAELFVFSFGIILRTYTKKDIILQPILRLIKAELP*
Ga0066836_104749621	3300006166	Marine	FADILNLFFAELFVLSFGIFLRSYTKIDINLQPLLKPIKAELP*
Ga0066836_107475621	3300006166	Marine	PLAVILNLFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAELP*
Ga0099675_14551101	3300006334	Marine	PLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLRLI*
Ga0099675_16493943	3300006334	Marine	AEILNLFFAELFVLSFGIILRSYTKKDIILQPILKLIMVELP*
Ga0099954_15407951	3300006350	Marine	AELLVFNFGIIERGYTYKEINLQPILRLIKAGLP*
Ga0099963_12498874	3300006413	Marine	TLPLADILNLFFAELFVLSFGIILRTYTKKDIILQPLLQLIKVELP*
Ga0111541_102665202	3300008097	Marine	FAVILNLFFAELFVFSFGIIERSYTNNNIILQPQILPIKAE*
Ga0111541_103101702	3300008097	Marine	FEVILNLFFAELLVLSFGIIVRFYTNNNIILQPQLLLIKAE*
Ga0105353_11538061	3300008249	Methane Seep Mesocosm	WGITTLPLAVILNLFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAELP*
Ga0115653_12117253	3300008625	Marine	AELLVLSFGIIVRTYTNINIILQHQLLLIKAELP*
Ga0115649_13707473	3300009008	Marine	AELLVLSFGIIVRTYTNINIILQHQLLPIKAELP*
Ga0102911_11571392	3300009049	Estuarine	FFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAE*
Ga0102826_10726113	3300009054	Estuarine	ILNLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAE*
Ga0117902_12559301	3300009104	Marine	AVILNLFLAELLVLSFGIIVRVYTNNNIILQHQLLLIKAE*
Ga0117917_11210223	3300009106	Marine	VILNLFLAELLVLSFGIIDRTYTNINIILQHQLLPIKAELP*
Ga0117922_11729473	3300009109	Marine	VILNLFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAE*
Ga0118730_13081503	3300009132	Marine	ITLPLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLKLIKAELP*
Ga0114995_103707603	3300009172	Marine	LFLAELLVFNFGIILRTYTNIGIDLQPILSLIKAE*
Ga0114995_106741562	3300009172	Marine	LNLFFAELFVFNFGIILRSYTNIGIDLQPLLSLIKAE*
Ga0115551_13925882	3300009193	Pelagic Marine	FFAELLVFNFGIILRSYTNIGIDFQPLLSPIKAE*
Ga0114993_103152761	3300009409	Marine	NLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKVE*
Ga0114993_103661453	3300009409	Marine	AIITFPVAEILNLFFAELFVFNVGIILRTYTNIGMDLQPILNPIKAE*
Ga0114994_106469621	3300009420	Marine	LNLFFAELLVFSFGIILGTYTNIGMDLQPLLSLIKAELP*
Ga0114994_109691532	3300009420	Marine	LFFAELFVFNFGIILRSYTNIAVDLQPLLSLIGAE*
Ga0114997_103284343	3300009425	Marine	ILNLFFAELFVFNFGIILRSYTNIGIDLQPLLNLIKAE*
Ga0115008_108216131	3300009436	Marine	VAEILNLFFAELFVFNFGIIEPSYTNIGIDLQPLLSTIMAG*
Ga0115558_13859062	3300009449	Pelagic Marine	AVITLPVADILNLFLAELFVFSFSIILRCYTKIDMDLQPLLRLIKAE*
Ga0114932_102047131	3300009481	Deep Subsurface	AITTFPLEVSLNLFFAELLVFSLGIIDWGYTNINIILQLQLLAIMAG*
Ga0115568_100570653	3300009498	Pelagic Marine	NLFLAELLVFSFGIILRVYTKKEIDLQPLLRLIKAE*
Ga0115568_104204111	3300009498	Pelagic Marine	LNLFLAELFVFNFGIILRTYTNIVIDLQPLLSLIKAE*
Ga0114933_101013773	3300009703	Deep Subsurface	AVILNLFFAELLVFSFGIILRVYTNNNIILQQQLFPIKVE*
Ga0114933_106230861	3300009703	Deep Subsurface	TLPLAEILNLFFAELFVFNLGINQRFYTKNDIILQPLLSLIKAE*
Ga0115000_101423283	3300009705	Marine	LNLFFAELFVFNLGIILRTYTNIGIDLQPLLSLIKVE*
Ga0115000_104075921	3300009705	Marine	VAEILNLFFAELFVFNFGIILRSYTNIAVDLQPLLSLIGAE*
Ga0138369_10898071	3300011302	Marine	IPLADSLNLFFAELFVFSFGIILRTYTKKDIILQPLLKLIKAELP*
Ga0163108_101760403	3300012950	Seawater	LFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAE*
Ga0163108_108772561	3300012950	Seawater	AVILNLFFAELLVFSFGIIATGYTNINIILQQQLLPIKAE*
Ga0182076_14237702	3300016739	Salt Marsh	LFFAELFVFSFGIILRTYTKKDIILQPILKLIKAELP
Ga0181422_10132581	3300017762	Seawater	ETLNLFFAELFVFNFGIILRTYTNIGIDLQPLLSLIKAE
Ga0181395_12524302	3300017779	Seawater	AVITLPLADILNLFFAELFVFNLGIILRTYTKNGIILQPLLNPIKVG
Ga0181590_106030921	3300017967	Salt Marsh	EITLPLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLKLIKAELP
Ga0181590_107558771	3300017967	Salt Marsh	ADILNLFFAELFVFSFGIILRTYTKKDIILQPLLSLIKAELP
Ga0181567_105081913	3300018418	Salt Marsh	TLPLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLKLIKAELP
Ga0181564_104848602	3300018876	Salt Marsh	ELFVFSFGIIERGYTENDLNLQQLLRPIKAGLPLSFVYRQT
Ga0181574_103230163	3300020056	Salt Marsh	AEITLPLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLKLIKAELP
Ga0181597_103674251	3300020194	Salt Marsh	FAELFVFNLGIIDRSYTKKDLNLQLILKPIKAELP
Ga0211492_10686542	3300020238	Marine	DILNLFFAELFVFSFGIILRTYTKKDIILQPLLRLIKAELP
Ga0211633_10525361	3300020259	Marine	LADILNLFLAELFVFNLGIILRTYTKNGIILQPLLNPIKVG
Ga0211490_10890501	3300020297	Marine	LAVILNLFFAELLVFNFGIIWRVYTNKNIILQQQLFPIKVELP
Ga0211594_10902651	3300020340	Marine	EITLPLEDILNLFFAELFVFSFGINLRSYTKKDIILQPLLRPIMAELP
Ga0211607_10842771	3300020346	Marine	EILNLFFAELFVFNFGIILRTYTKNVVILQPQLKLITAELPLSFVFHQI
Ga0211488_101505362	3300020362	Marine	LFFAELFVLSFGIILRVYTYNVKNLQPILRLIKAE
Ga0211672_102594411	3300020370	Marine	FPLAVILNLFLAELLVLSFGICGWFYTNINIDLQP
Ga0211683_100246071	3300020372	Marine	LNLFFAELLVFNFGIILRTYTNIGMNLQPLLSLIKAE
Ga0211682_101832851	3300020376	Marine	ILNLFFAELFVFNFGIILRSYTNIAIDLQPLLSLIVAE
Ga0211682_102223631	3300020376	Marine	ILNLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAE
Ga0211476_101931012	3300020381	Marine	TLPLDVILNLFFAELFVFSFGIIERGYTNINIILQLQISIIKAE
Ga0211557_103044101	3300020418	Marine	LNLFFAELFVLSFGIILRVYTNINIILQHQLLPIKAELP
Ga0211521_102648641	3300020428	Marine	NLFFAELFVFSFGIIVRVYTNNNIILQLQLLAIKAE
Ga0211521_103191822	3300020428	Marine	TLPLAEILNLFFAELFVFNLGINQRSYTKNDIILQPLLNLIKAE
Ga0211564_102165601	3300020445	Marine	DILNLFFAELFVFSLGIIFRGYTNINIILQLELLLIMAE
Ga0211564_103127201	3300020445	Marine	LFFAELLVLSFGIIFRTYTNINIILQHQLLPIKAGLP
Ga0211550_103026771	3300020453	Marine	LFLAELFVLSFGIIERVYTNINIILQPQILPIKAE
Ga0211548_104319831	3300020454	Marine	VITLPLADILNLFLAELLVLSFGIILRCYTKIDINLQPLIKAYKG
Ga0211551_100849641	3300020456	Marine	EILNLFFAELLVFSFGIIFRVYTNINIVLQLILLAILAESP
Ga0211551_104425832	3300020456	Marine	AVKTLPFADILNLFFAELFVLSFGIILRGYTKNDLNLQPKLQLI
Ga0211551_105909902	3300020456	Marine	LPLAVILNLFFAELLVFNFGICGRFYTNIRINLQPKL
Ga0211535_101889303	3300020461	Marine	LNLFLAELFVLSFGIIERGYTNINIILQPQILPIKAE
Ga0211546_106891141	3300020462	Marine	VAEILNLFFAELFVFNLGIILRSYTNIEIDLQPLLTLIKAE
Ga0211640_107493961	3300020465	Marine	IITFPLAVILNLFLAELLVLSFGIIVSGYTNNRNILQPQLLPIKAG
Ga0211614_105243621	3300020471	Marine	LAVILNLFLAELFVLSFGIIVSGYTNNRNILQPQLLPIKAE
Ga0211715_104887782	3300020476	Marine	LPLAVILNLFLAELLVLSFGIIERTYTNINIILQDQLLPIKAE
Ga0211715_106486221	3300020476	Marine	AVILNLFFAELLVFSLGIISTRYTNITIVLQLELSAIKAE
Ga0206686_10723773	3300021065	Seawater	LPLAVILNLFFAELLVLSFGIILRVYTNINIILQHQLLPIKAELP
Ga0206678_101461761	3300021084	Seawater	AVILNLFFAELFVLSFGIILRIYTNINIILQHQLLPIKAELP
Ga0194122_104501742	3300021092	Freshwater Lake	NLFFAELFVLSFGIIVRCYTKIDTILQPLIRLIKVELP
Ga0206691_18620842	3300021342	Seawater	VILNLFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAVLP
Ga0206681_103342451	3300021443	Seawater	AVILNLFFAELFVFNFGIIERIYTNINIILQPQLLSIMVE
(restricted) Ga0233433_100875181	3300022931	Seawater	NLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAE
(restricted) Ga0233427_101253791	3300022933	Seawater	LNLFFAELFVFNFGIITRSYTNIGIDLQPLLSLIKAE
Ga0209992_102165091	3300024344	Deep Subsurface	ITLPFADILNLFFAELFVLSFGIFLRSYTKIDINLQPQLRPIKVELP
Ga0209992_102371361	3300024344	Deep Subsurface	LFFAELFVFSFGIILRVYTKNVVNLQLLLKLIKAELP
Ga0244776_103208893	3300024348	Estuarine	NLFFAELFVFNLGIILRSYTNIVIDLQPLLRPIKAE
Ga0208770_10472413	3300025438	Saline Lake	LNLFFAELLVFNFGIILRTYTNIGMDLQPLLSLIKAE
Ga0209632_104909471	3300025886	Pelagic Marine	ETLNLFLAELFVFNFGIILRIYTNIVIDLQPLLSLIKAE
Ga0208524_10261951	3300026261	Marine	LFFAELLVLSFGIIVSGYTNNRNILQPQLLPIKAE
Ga0208764_103266681	3300026321	Marine	LAVILNLFFAELLVLSFGIIVRTYTNINIILQHQLLPIKAE
Ga0208764_103789281	3300026321	Marine	ITLPFADILNLFLAELFVLSFGIILRCYTNIDINLQPLLRPIKAELP
Ga0209192_101905971	3300027752	Marine	LFLAELLVFNFGIILRTYTNIGIDLQPILSLIKAE
Ga0209709_100191481	3300027779	Marine	AEILNLFFAELLVFNFGIILGTYTNIGMDLQPLLNLIKAE
Ga0209091_103000343	3300027801	Marine	EILNLFFAELLVFNFGIILGTYTNIGMDLQPLLNLIKAE
Ga0209091_103118252	3300027801	Marine	LPAWAHITLPVADILNLFFAELFVFNLGIILRSYTKIDENLQLILKSIKVELP
Ga0209091_103520542	3300027801	Marine	LFFAELFVFNFGIILRTYTNIGIDLQPLLSPIKAE
Ga0209359_102124883	3300027830	Marine	NLFFAELFVFSFGIIFRRYTKNGENLQPLLRPIKAELP
Ga0209359_103480362	3300027830	Marine	ILNLFFAELLVLSFGIIVRVYTKKDLDLQPLLKLIMAELP
Ga0209501_103475693	3300027844	Marine	FPVAETLNLFFAELFVFSFGIILRCYTNIAIDLQPLLSPIRAE
Ga0209712_105077161	3300027849	Marine	VAEILNLFFAELFVFNLGIILRTYTNIVIDLQPLLSLIKAE
Ga0257106_10531861	3300028194	Marine	DITLPVAEILNLFFAELLVFNFGIILRCYTNIDTNLQPLLSLIKVE
Ga0257106_10809173	3300028194	Marine	LPVAEILNLFFAELLVFNFGIILRSYTNIGIDLQPILSPIKAE
Ga0257106_13142702	3300028194	Marine	FESFFAELLVFNFGIILRSYTNIVMNLQPLLSLIKVE
Ga0257110_12187682	3300028197	Marine	VAEILNLFFAELLVFNFGIILRTYTNIGIDLQPLLSLIKAE
Ga0257120_10285943	3300028284	Marine	VAETLNLFFAELFVFNFGIITRSYTNIGIDLQPLLSLIKAE
Ga0308025_12548361	3300031143	Marine	ILNLFFAELLVFNFGIILPSYTNIGIDLQPLLSPTKAE
Ga0308010_12965211	3300031510	Marine	ILNLFFAELLVFNFGIILPTYTNIGIDLQPLLSPTKAE
Ga0308004_102141121	3300031630	Marine	EILNLFFAELFVFNFGIILRSYTNIGIDLQPLLSLIKAE
Ga0308001_100193481	3300031644	Marine	LNLFFAELFVFNLGIILRTYTNIGIDLQPLLSLIKVE
Ga0307986_103034881	3300031659	Marine	AEILNLFFAELFVFNLGIILRSYTNIGIDLQPLLSLIKAE
Ga0307986_103062031	3300031659	Marine	LFFAELLVFNLGIILRTYTNIGIDLQPLLSLIKAE
Ga0308016_100334971	3300031695	Marine	LFFAELLVFNFGIILGSYTNIGMDLQPLLSLIKAE
Ga0307998_12352781	3300031702	Marine	PVAEILNLFFAELFVFNLGIILRSYTNIGIDLQPLLSLIKVE
Ga0310343_105382483	3300031785	Seawater	FFAELFVLSFGIIVRVYTNKDVNLQPLLKLIMVELP
Ga0310344_107953433	3300032006	Seawater	FAVILNLFFAELFVLSFGIIVRTYTNINIILQHQLLPIKAELP
Ga0315316_109726201	3300032011	Seawater	LNLFLAELFVLSFGIIERVYTKNVENLQLILNLIKAELP
Ga0315330_105544461	3300032047	Seawater	PLADILNLFFAELFVFSFGIILRTYTKKDIILQPLLRLIKAELP
Ga0315329_106416342	3300032048	Seawater	LPLAVILNLFFAELLVFSFGIIRCVYTNIKLNLQQLL
Ga0315339_11094093	3300032134	Seawater	LFFAELLVFSFGIIATGYTNINIILQQQLLPIKAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters