Metagenome Family F065093

Basic Information
Family ID	F065093
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	44 residues
Representative Sequence	LAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Number of Associated Samples	105
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.56 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	91.41 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (7.812 % of family members)
Environment Ontology (ENVO)	Unclassified (50.781 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.750 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.49% β-sheet: 21.74% Coil/Unstructured: 63.77%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01545	Cation_efflux	73.44
PF02457	DAC	8.59
PF00571	CBS	6.25
PF00072	Response_reg	0.78
PF02880	PGM_PMM_III	0.78
PF01293	PEPCK_ATP	0.78
PF07949	YbbR	0.78
PF16916	ZT_dimer	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	73.44
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	73.44
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	73.44
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.78
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.78
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	0.78
COG4856	Cyclic di-AMP synthase regulator CdaR, YbbR domain	Signal transduction mechanisms [T]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	6.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.25 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Afipia sp. GAS231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0852694	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300000953\|JGI11615J12901_10257046	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300000953\|JGI11615J12901_10560893	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300003203\|JGI25406J46586_10115334	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300003324\|soilH2_10142438	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300004480\|Ga0062592_101801744	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300004480\|Ga0062592_102114683	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005093\|Ga0062594_101688590	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005093\|Ga0062594_103071777	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	522	Open in IMG/M
3300005290\|Ga0065712_10394254	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005293\|Ga0065715_10767566	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005294\|Ga0065705_10263346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1154	Open in IMG/M
3300005336\|Ga0070680_101546696	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005340\|Ga0070689_100308121	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005340\|Ga0070689_100679400	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005344\|Ga0070661_101698903	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005345\|Ga0070692_11361322	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005441\|Ga0070700_100108199	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300005444\|Ga0070694_101093714	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005530\|Ga0070679_102025282	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005539\|Ga0068853_101382749	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005543\|Ga0070672_100737510	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005545\|Ga0070695_101656666	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005549\|Ga0070704_100098691	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300005577\|Ga0068857_101430691	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005578\|Ga0068854_100063127	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300005578\|Ga0068854_100990283	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005615\|Ga0070702_100462475	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005616\|Ga0068852_101992526	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300005617\|Ga0068859_101529119	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005719\|Ga0068861_101035084	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005719\|Ga0068861_101719248	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	621	Open in IMG/M
3300005719\|Ga0068861_102303163	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005842\|Ga0068858_100311718	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300005842\|Ga0068858_101696973	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	624	Open in IMG/M
3300005844\|Ga0068862_100128375	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300005886\|Ga0075286_1064598	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005890\|Ga0075285_1015263	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006169\|Ga0082029_1282158	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006173\|Ga0070716_100430088	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006755\|Ga0079222_10889953	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006844\|Ga0075428_100569119	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300006844\|Ga0075428_101202118	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006847\|Ga0075431_100853039	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006876\|Ga0079217_10005647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3733	Open in IMG/M
3300006894\|Ga0079215_10033535	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300006894\|Ga0079215_10743114	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006904\|Ga0075424_102557169	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006918\|Ga0079216_10033183	All Organisms → cellular organisms → Bacteria → Acidobacteria	2089	Open in IMG/M
3300007076\|Ga0075435_100023232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4792	Open in IMG/M
3300007076\|Ga0075435_102057917	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009011\|Ga0105251_10432056	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	608	Open in IMG/M
3300009098\|Ga0105245_12372894	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009148\|Ga0105243_10926242	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300009156\|Ga0111538_10583122	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300009156\|Ga0111538_12270131	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300009545\|Ga0105237_11521277	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009551\|Ga0105238_11479121	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300009553\|Ga0105249_12744337	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010037\|Ga0126304_10630345	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010038\|Ga0126315_10147281	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300010045\|Ga0126311_10116668	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300010371\|Ga0134125_11592628	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010397\|Ga0134124_10013496	All Organisms → cellular organisms → Bacteria	6619	Open in IMG/M
3300010397\|Ga0134124_13041808	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010399\|Ga0134127_12294197	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010399\|Ga0134127_13672746	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010403\|Ga0134123_10535395	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300011119\|Ga0105246_11693383	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	601	Open in IMG/M
3300012202\|Ga0137363_10902039	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012212\|Ga0150985_113326633	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012359\|Ga0137385_10723477	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300012922\|Ga0137394_10210187	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300013102\|Ga0157371_11295270	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300013297\|Ga0157378_12170029	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300013306\|Ga0163162_11292276	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300013306\|Ga0163162_12753200	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300013307\|Ga0157372_11939269	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300013308\|Ga0157375_13317179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	536	Open in IMG/M
3300014267\|Ga0075313_1211298	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300014326\|Ga0157380_10024015	All Organisms → cellular organisms → Bacteria	4608	Open in IMG/M
3300014745\|Ga0157377_10323675	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300014878\|Ga0180065_1134612	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300015264\|Ga0137403_10136678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	2429	Open in IMG/M
3300015372\|Ga0132256_101305901	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300015374\|Ga0132255_103647011	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300017792\|Ga0163161_10071194	All Organisms → cellular organisms → Bacteria	2544	Open in IMG/M
3300018465\|Ga0190269_11408719	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	566	Open in IMG/M
3300018466\|Ga0190268_10558410	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018466\|Ga0190268_10924819	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300018476\|Ga0190274_11072605	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025885\|Ga0207653_10088890	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300025893\|Ga0207682_10358137	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300025901\|Ga0207688_10410409	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300025907\|Ga0207645_11093258	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300025908\|Ga0207643_10246840	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300025913\|Ga0207695_11137915	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300025917\|Ga0207660_11682260	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300025920\|Ga0207649_11133402	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300025933\|Ga0207706_10234062	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300025935\|Ga0207709_11441572	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300025935\|Ga0207709_11474609	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025939\|Ga0207665_10275794	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300025939\|Ga0207665_10643444	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300025941\|Ga0207711_10791590	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300025960\|Ga0207651_11564996	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300025981\|Ga0207640_10689253	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300026067\|Ga0207678_11749109	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026071\|Ga0208537_1006326	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300026078\|Ga0207702_11523630	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300026088\|Ga0207641_11261931	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300026116\|Ga0207674_11348435	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300026116\|Ga0207674_11466791	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300026116\|Ga0207674_11716965	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026322\|Ga0209687_1044361	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300027725\|Ga0209178_1235095	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300027725\|Ga0209178_1391944	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300027880\|Ga0209481_10049397	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300028381\|Ga0268264_11860418	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031716\|Ga0310813_10681394	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300031716\|Ga0310813_11561172	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031716\|Ga0310813_11769185	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	580	Open in IMG/M
3300031847\|Ga0310907_10229465	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031908\|Ga0310900_10150923	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300032003\|Ga0310897_10564465	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032126\|Ga0307415_100140541	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300033412\|Ga0310810_11364969	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300033513\|Ga0316628_102418066	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.78%
Environmental	Environmental	49.22%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.78%
Terrestrial	Environmental → Terrestrial	48.44%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.66%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.53%
Loam	Environmental → Terrestrial → Soil → Loam	11.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.34%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.56%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026071	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08526942	2228664021	Soil	NGIGSLAVVGKNGELVGFLQSGKFRRKKQRAKRAAS
JGI11615J12901_102570463	3300000953	Soil	EPNATLDYAQELMRRNGIGSVAVVGRTGELVGFLQSGKFKRKKRK*
JGI11615J12901_105608934	3300000953	Soil	RELMKRNGIGSLAVVGKNGELVGFLQSGKFKRKKQRVKRAVS*
JGI25406J46586_101153342	3300003203	Tabebuia Heterophylla Rhizosphere	ARELMKRNGIGSLAVVGKNGELVGFLQSGKFKRKKRAKQSA*
soilH2_101424382	3300003324	Sugarcane Root And Bulk Soil	APRFFVEPNATLAYAQELMRRNGIGSVAVVGKTGELVGFLQTGKFKRIKRSAKASR*
Ga0062592_1018017441	3300004480	Soil	TLVYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRSRTSR*
Ga0062592_1021146832	3300004480	Soil	DLMSKNGIGSVAVVGKNGELVGFLQNGTFKRKKVRRTKTSS*
Ga0062594_1016885902	3300005093	Soil	KELMKRNGIGSVAVVGKTGELVGFLQTGRFKRTKRSKTSRQ*
Ga0062594_1030717772	3300005093	Soil	NTTLDYAQELMKRNGIGSVAVVGKGGELVGFLQSGKFKRKKR*
Ga0065712_103942541	3300005290	Miscanthus Rhizosphere	RELMKRNGIGSVAVVGKTGELVGFLQTGTFKRRKRARAST*
Ga0065715_107675662	3300005293	Miscanthus Rhizosphere	LDFARELMKRNGVGSLAVVGKNGELVGFLQSGEFVRKKL*
Ga0065705_102633462	3300005294	Switchgrass Rhizosphere	NATLDFAKELMSRNGVNSLAVVGKDGELVGFLQNGKFKRQRRREKQTRSVA*
Ga0070680_1015466962	3300005336	Corn Rhizosphere	TLDYARELMKRNGIGSLAVVGKNGELVGFLQSGKFRRKKQRAKRATS*
Ga0070689_1003081212	3300005340	Switchgrass Rhizosphere	ELMKRNGIGSLAVVAKNGELVGFLQSGRFKRKKQRLTRASS*
Ga0070689_1006794002	3300005340	Switchgrass Rhizosphere	RFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0070661_1016989032	3300005344	Corn Rhizosphere	TLAYAQELMKRNGIGSVAVVGKTGELVGFLQTGKFKRIKRSQKPLAKSV*
Ga0070692_113613222	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PTATIDYARELMKRNGIGSLAVVGKNGELVGFLQSGKFKRKKRVKQSA*
Ga0070700_1001081993	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0070694_1010937141	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NATLDYARELMKRNGIGSVAVVGKTGELVGFLQTGTFKRRKRARAST*
Ga0070679_1020252821	3300005530	Corn Rhizosphere	DYARELMKRNGIGSLAVVGKNGELVGFLQSGRFRRKKQRLKRASS*
Ga0068853_1013827491	3300005539	Corn Rhizosphere	TLAYAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRVKRK*
Ga0070672_1007375102	3300005543	Miscanthus Rhizosphere	LDYAQELMRRNGIGSVAVVGSTGELVGFLQSGKFKRKKRK*
Ga0070695_1016566662	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EPNATLGYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0070704_1000986911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LMERNGIGSVAVVGKTGELVGFLQTGRFKRGRRSQKSTN*
Ga0068857_1014306911	3300005577	Corn Rhizosphere	TLDYAQELMKRNGIGSLAVVGKSGELVGFLQSGKFKRKKRSKGN*
Ga0068854_1000631272	3300005578	Corn Rhizosphere	MKRNGIGSVAVVGKTGELVGFLQSGKFKRIKRKK*
Ga0068854_1009902832	3300005578	Corn Rhizosphere	TLDYARELMKRNGIGSLAVVGKNGELVGFLQSGKFKRKRAQKPPVTSNKPTSGLLK*
Ga0070702_1004624752	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	NATLAYAQELMRRNGIGSVAVVGKTGELVGFLQTGKFKRTKRSQKPLAKSV*
Ga0068852_1019925261	3300005616	Corn Rhizosphere	PNATLAYAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRIKRKK*
Ga0068859_1015291191	3300005617	Switchgrass Rhizosphere	NATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRK*
Ga0068861_1010350841	3300005719	Switchgrass Rhizosphere	PIAPRFFVEPNATLGYAQELMKRNGIGSVAVVGKTGELIGFLQTGKFKRVKRAQNSR*
Ga0068861_1017192481	3300005719	Switchgrass Rhizosphere	LAYAQELMKRNGIGSVAVVGKTGELVGFLQTGKFKRIKRSQKPLAKSV*
Ga0068861_1023031632	3300005719	Switchgrass Rhizosphere	APRFFVEPNATLDYAQELMKRNGIGSVAVVGKTGELIGFLQTGRFKRTKRSKASQ*
Ga0068858_1003117183	3300005842	Switchgrass Rhizosphere	PRFFVEPNTTLDYAQELMKRNGIGSVAVVGKGGELVGFLQSGKFKRKKR*
Ga0068858_1016969732	3300005842	Switchgrass Rhizosphere	TLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRIKRSQKPLAKSV*
Ga0068862_1001283753	3300005844	Switchgrass Rhizosphere	EPNATLDYARELMKRNGIGSLAVVGKNGELVGFLQNGTFKRKKRSRVENALHP*
Ga0075286_10645981	3300005886	Rice Paddy Soil	AQELMRRNGIGSVAVVGKSGELVGFLQSGKFKRTKRKK*
Ga0075285_10152632	3300005890	Rice Paddy Soil	QELMRRNGIGSVAVVGKTGELVGFLQSGKFKRKKRARASR*
Ga0082029_12821581	3300006169	Termite Nest	TLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRIKRSAKSPVKSV*
Ga0070716_1004300881	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LDYARELMKRNGIGSLAVVGKDGELVGFLQSGKFKRKRRAKESR*
Ga0079222_108899531	3300006755	Agricultural Soil	ATLGYARELMKVNGIGSLAVVGKNGELVGFLQSGKFKRKRR*
Ga0075428_1005691191	3300006844	Populus Rhizosphere	EPNATLDYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRK*
Ga0075428_1012021182	3300006844	Populus Rhizosphere	ELMKRNGIGSLAVVGKNGELVGFLQSGRFKRKKRSKRAAS*
Ga0075431_1008530392	3300006847	Populus Rhizosphere	TLDYAQELMKRNGIGSVAVVGKGGELVGFLQSGKFKRTKKRAT*
Ga0079217_100056471	3300006876	Agricultural Soil	NGIGSLAVVGKNGELVGFLQSGKFKRKKQRANRAPS*
Ga0079215_100335351	3300006894	Agricultural Soil	TAKLDYARELMKRNGIGSLAVVGKNGELVGFLQTGKFKRKRRAKDSR*
Ga0079215_107431141	3300006894	Agricultural Soil	MKRNGINSVAVVGKSGELVGFLQSGKFKRTKRSKDAR*
Ga0075424_1025571692	3300006904	Populus Rhizosphere	TATLGYAQELMKRNGIGSVAVVGKNGDLVGFLQTGKVKRVKRASQ*
Ga0079216_100331831	3300006918	Agricultural Soil	MKRNGIGSLAVVGKNGELVGFLQSGKFKRKRRAKDSSKNLPRFTD*
Ga0075435_1000232321	3300007076	Populus Rhizosphere	RNGIGSVAVVGKNGDLVGFLQTGKFKRRRRASSAR*
Ga0075435_1020579171	3300007076	Populus Rhizosphere	RELMKRNGIGSLAVVGKDGELVGFLQSGKFKRKKR*
Ga0105251_104320562	3300009011	Switchgrass Rhizosphere	LAYAQELMKRNGIGSVAVVGKTGELVGFLQTGKFKRTKRKK*
Ga0105245_123728941	3300009098	Miscanthus Rhizosphere	NATLDYAQELMKRNGIGSVAVVGRTGELVGFLQSGKFKRKKRK*
Ga0105243_109262421	3300009148	Miscanthus Rhizosphere	RELMKRNGIGSLAVVGKNGELVGFLQTGRIKRKKRRVNRASS*
Ga0111538_105831223	3300009156	Populus Rhizosphere	LMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0111538_122701311	3300009156	Populus Rhizosphere	PNATLDYAQELMKRNGIGSVAVVGSTGELVGFLQTGKIKRKKRS*
Ga0105237_115212771	3300009545	Corn Rhizosphere	NATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0105238_114791211	3300009551	Corn Rhizosphere	FFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRIKRKK*
Ga0105249_127443371	3300009553	Switchgrass Rhizosphere	ELMKRNGIGSLAVVGKNGELVGFLQSGEFVRKKR*
Ga0126304_106303452	3300010037	Serpentine Soil	PRFFVEPNASLDYAQELMKRNGIGSVAVVGKNGDLVGFLQSGKFKRRKRK*
Ga0126315_101472813	3300010038	Serpentine Soil	ATLDYAQELMKRNGIGSVAVVGKTGELVGFLQAGKFKRTKRSGKVSR*
Ga0126311_101166683	3300010045	Serpentine Soil	EPNATLAYAQELMRRNGIGSVAVVGKSGELVGFLQTGKFKRIKRKK*
Ga0134125_115926282	3300010371	Terrestrial Soil	VEPNATLDYAQALMKQNGIGSVAVVGKRGELVGFLQTGKLKRRKKVHRSTKAANR*
Ga0134124_100134966	3300010397	Terrestrial Soil	APRFFVEPNTTLDYAQELMKRNGIGSVAVVGKGGELVGFLQSGKFKRKKR*
Ga0134124_130418081	3300010397	Terrestrial Soil	TLDYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRSRTSR*
Ga0134127_122941971	3300010399	Terrestrial Soil	IAPRFFVEPNATLGYAQELMKRNGIGSVAVVGKTGELIGFLQTGKFKRAKRAQNSR*
Ga0134127_136727462	3300010399	Terrestrial Soil	QELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0134123_105353951	3300010403	Terrestrial Soil	TLDYAQELMKRNGIGSVAVVGKGGELVGFLQSGKFKRTKKRAK*
Ga0105246_116933832	3300011119	Miscanthus Rhizosphere	KRNGIGSVAVVGKNGELVGFLQSGKFKRTRRAKESR*
Ga0137363_109020391	3300012202	Vadose Zone Soil	ATLDYARELMKRNGIGSLAVVGKNGELVGFLQNGRLKRRKR*
Ga0150985_1133266331	3300012212	Avena Fatua Rhizosphere	NATLAYAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRTKRK*
Ga0137385_107234771	3300012359	Vadose Zone Soil	NGIGSLAVVGKNGELVGFLQNGTLKRRKRSNERRESPA*
Ga0137394_102101873	3300012922	Vadose Zone Soil	EPTATLDYARELMKSNGVSSLAVVGKSGELVGFLQSGTFKRQRRTKEARKTS*
Ga0157371_112952701	3300013102	Corn Rhizosphere	NATLAYAQELKKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK*
Ga0157378_121700291	3300013297	Miscanthus Rhizosphere	PRFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRIKRSQKPLAKSV*
Ga0163162_112922761	3300013306	Switchgrass Rhizosphere	TLDYAQELMRRNGIGSVAVVGRTGELVGFLQSGKFKRKKRK*
Ga0163162_127532002	3300013306	Switchgrass Rhizosphere	YAQELMKRNGIGSVAVVGKTVELVGFLQSGKFKRKKRSRTSR*
Ga0157372_119392691	3300013307	Corn Rhizosphere	LEYARELMKRNGIGSLAVVGKNGELVGFLQSGKFKRK*
Ga0157375_133171791	3300013308	Miscanthus Rhizosphere	TLDYARELMKRNGIGSLAVVGKNGELVGFLQNGTFKRKKRSRVENALHP*
Ga0075313_12112981	3300014267	Natural And Restored Wetlands	LDYARELMKRNGIGSLAVVGKNGELVGFLQSGRFKRKKRSKSASS*
Ga0157380_100240151	3300014326	Switchgrass Rhizosphere	NSGLDYARELMKRNGIGSLAVVGKNGELVGFLQSGRFKRKKQRLKRASS*
Ga0157377_103236752	3300014745	Miscanthus Rhizosphere	IGSLAVVAKNGELVGFLQSGRFKRKKQRLTRASS*
Ga0180065_11346122	3300014878	Soil	IGSLAVVGKNGELVGFLQNGKLKRKKRSNDVRRQPA*
Ga0137403_101366783	3300015264	Vadose Zone Soil	EPTATLDYARELMKRNGISSLAVVGKSGELVGFLQSGTFKRQRRTKEARQTS*
Ga0132256_1013059013	3300015372	Arabidopsis Rhizosphere	ELMKRNGIGSVAVVGKSGELIGFLQTGTFKRTKRRA*
Ga0132255_1036470111	3300015374	Arabidopsis Rhizosphere	HARELMKRNGVGSLAVVGKNGELVGFLQNGTFKRKRG*
Ga0163161_100711941	3300017792	Switchgrass Rhizosphere	TIDFAKDLMSRNGIGSLAVVGKNGELVGFLQNGTFKRKKRSKAARS
Ga0190269_114087191	3300018465	Soil	IAPRFFVEPNATIDYAQELMKRNGIGSVAVVGKNGDLVGFLQSGSFKRKKRSKT
Ga0190268_105584102	3300018466	Soil	EPNATLDYAQELMKRNGIGSVAVVGKSGELVGFLQTGKFKRTKRSKVQ
Ga0190268_109248191	3300018466	Soil	PIAPRFFVEPNATLDYAQELMKRNGIGSVAVVGKSGELLGFLQTGKFKSKKR
Ga0190274_110726051	3300018476	Soil	ELMKRNGIGSVAVVGKTGELVGFLQTGKFKRKKRK
Ga0207653_100888901	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	FFVEPNATLAYAQQLMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207682_103581372	3300025893	Miscanthus Rhizosphere	RFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207688_104104092	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	APRFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207645_110932581	3300025907	Miscanthus Rhizosphere	PRFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207643_102468402	3300025908	Miscanthus Rhizosphere	DYARELMKRNGIGSVAVVGKTGELVGFLQTGTFKRRKRARAST
Ga0207695_111379151	3300025913	Corn Rhizosphere	ELMRRNGIGSVAVVGKTGELVGFLQSGKFKRKKRK
Ga0207660_116822602	3300025917	Corn Rhizosphere	ELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207649_111334021	3300025920	Corn Rhizosphere	AYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTNKQDRAR
Ga0207706_102340621	3300025933	Corn Rhizosphere	RELMKRNGIGSLAVVGKNGELVGFLQSGRFKRKKHRLKRASS
Ga0207709_114415721	3300025935	Miscanthus Rhizosphere	MKRNGIGSVAVVGKTGELIGFLQTGKFKRAKRAQNSRVN
Ga0207709_114746091	3300025935	Miscanthus Rhizosphere	NATLAYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0207665_102757942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AKLDYARELMKRNGIGSLAVVGKDGELVGFLQSGKFKRKRRAKESR
Ga0207665_106434441	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RLEYARELMKVNGIGSVAVVGKNGELVGFLQTGKFKRRRRTKDSR
Ga0207711_107915902	3300025941	Switchgrass Rhizosphere	YAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRTKRK
Ga0207651_115649962	3300025960	Switchgrass Rhizosphere	LDFARELMKRNGIGSLAVVGKNGELVGFLQSGEFVRKKR
Ga0207640_106892531	3300025981	Corn Rhizosphere	NATLDYARELMKRNGVGSLAVVGKNGELVGFIQNGTVKLKKRTREAKQRTA
Ga0207678_117491092	3300026067	Corn Rhizosphere	AYAQELMKRNGIGSVAVVGKTGELVGFLQTGKFKRTKRKK
Ga0208537_10063263	3300026071	Natural And Restored Wetlands	LMKRNGIGSVAVVGSTGELVGFLQNGKFKRKKRAQ
Ga0207702_115236301	3300026078	Corn Rhizosphere	ELMKRNGIASVAVVGKTGELVGFLQAGKFRRKKRK
Ga0207641_112619311	3300026088	Switchgrass Rhizosphere	NATLAYAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRTKRSAKKSSR
Ga0207674_113484351	3300026116	Corn Rhizosphere	NATLDYAQELMRRNGIGSVAVVGNTGELVGFLQSGKFKRKKRK
Ga0207674_114667912	3300026116	Corn Rhizosphere	ELMKRNGIGSVAVVGKTGELIGFLQTGKFKRVKRSRKSL
Ga0207674_117169651	3300026116	Corn Rhizosphere	NATLDYAQELMRRNGIGSVAVVGNTGELVGFLQTGKFKRKRRSRNSK
Ga0209687_10443611	3300026322	Soil	YAQELMKRNGIGSVAVVGKNGDLVGFLQAGRFKRTQRARASR
Ga0209178_12350952	3300027725	Agricultural Soil	GYARELMKVNGIGSLAVVGKNGELVGFLQSGKFKRKRR
Ga0209178_13919441	3300027725	Agricultural Soil	APRFFVEPNATLAYAQELMKRNGIGSVAVVGKTGELVGFLQTGKFKRTKRSRSSK
Ga0209481_100493971	3300027880	Populus Rhizosphere	RLDYARELMKRNGIGSLAVVGKNGELVGFLQSGRFKRKKRSKRAAS
Ga0268264_118604182	3300028381	Switchgrass Rhizosphere	QELMRRNGIGSVAVVGSTGELVGFLQSGKFKRKKRK
Ga0310813_106813943	3300031716	Soil	EPNATLDYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRSRTSR
Ga0310813_115611721	3300031716	Soil	QELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRK
Ga0310813_117691851	3300031716	Soil	QELMRRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0310907_102294651	3300031847	Soil	FVEPNATLAYAQELMRRNGIGSVAVVGKTGELVGFLQSGKFKRTKRKK
Ga0310900_101509233	3300031908	Soil	VEPNATLDYAQELMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRK
Ga0310897_105644651	3300032003	Soil	RELMKRNGIGSVAVVGKTGELVGFLQTGTFKRRKRARAST
Ga0307415_1001405413	3300032126	Rhizosphere	RNGIGSVAVVGKNGELVGFLQSGTFKRTKRKAAAR
Ga0310810_113649691	3300033412	Soil	LMKRNGIGSVAVVGKTGELVGFLQSGKFKRKKRSRTSR
Ga0316628_1024180661	3300033513	Soil	EPNTSLDYARELMNRNGVGSVAVVGKNGELVGFLQNGKFKRRKRSKDK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065093

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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