Metagenome Family F065089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065089
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	43 residues
Representative Sequence	MTRKIAYWASTAIVAVALLGALTYLTGSEQVVSGFAKAGYPQ
Number of Associated Samples	115
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.28 %
% of genes near scaffold ends (potentially truncated)	98.44 %
% of genes from short scaffolds (< 2000 bps)	91.41 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.062 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (33.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.844 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.57% β-sheet: 0.00% Coil/Unstructured: 51.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02687	FtsX	8.59
PF08327	AHSA1	7.03
PF13493	DUF4118	3.12
PF04367	DUF502	2.34
PF01638	HxlR	2.34
PF12704	MacB_PCD	2.34
PF08241	Methyltransf_11	1.56
PF06439	3keto-disac_hyd	1.56
PF13809	Tubulin_2	1.56
PF12840	HTH_20	1.56
PF07676	PD40	1.56
PF04909	Amidohydro_2	1.56
PF04794	YdjC	1.56
PF00528	BPD_transp_1	1.56
PF00903	Glyoxalase	1.56
PF13517	FG-GAP_3	0.78
PF00924	MS_channel	0.78
PF05974	DUF892	0.78
PF13664	DUF4149	0.78
PF01400	Astacin	0.78
PF08681	DUF1778	0.78
PF00498	FHA	0.78
PF14534	DUF4440	0.78
PF04250	DUF429	0.78
PF13520	AA_permease_2	0.78
PF13703	Obsolete Pfam Family	0.78
PF04893	Yip1	0.78
PF00069	Pkinase	0.78
PF08240	ADH_N	0.78
PF00291	PALP	0.78
PF00857	Isochorismatase	0.78
PF08447	PAS_3	0.78
PF13946	DUF4214	0.78
PF14224	DUF4331	0.78
PF07040	DUF1326	0.78
PF03702	AnmK	0.78
PF13191	AAA_16	0.78
PF00106	adh_short	0.78
PF13564	DoxX_2	0.78
PF03795	YCII	0.78
PF03551	PadR	0.78
PF00583	Acetyltransf_1	0.78
PF12680	SnoaL_2	0.78
PF13792	Obsolete Pfam Family	0.78
PF11578	DUF3237	0.78
PF08450	SGL	0.78
PF00578	AhpC-TSA	0.78
PF07681	DoxX	0.78
PF03572	Peptidase_S41	0.78
PF12833	HTH_18	0.78
PF13620	CarboxypepD_reg	0.78
PF09722	Xre_MbcA_ParS_C	0.78
PF13360	PQQ_2	0.78
PF14559	TPR_19	0.78
PF05163	DinB	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.12
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG2928	Uncharacterized membrane protein	Function unknown [S]	2.34
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	1.56
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.78
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.78
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.78
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.78
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.78
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.78
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.78
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.44 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.16 %
Unclassified	root	N/A	10.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.16 %
Unclassified	root	N/A	10.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.56 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.78 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.78 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.78 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.78 %
Caballeronia arationis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia arationis	0.78 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.78 %
Caballeronia arationis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia arationis	0.78 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.94 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.47 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.78 %
Caballeronia arationis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia arationis	0.78 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig87370	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
2170459017\|G14TP7Y01BJ9SS	Not Available	639	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2001781	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300000443\|F12B_10958397	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300000550\|F24TB_10019121	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300000550\|F24TB_13904359	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300000787\|JGI11643J11755_11226198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia arationis	571	Open in IMG/M
3300000891\|JGI10214J12806_13008975	Not Available	733	Open in IMG/M
3300000955\|JGI1027J12803_105618334	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300000955\|JGI1027J12803_106149149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2830	Open in IMG/M
3300000956\|JGI10216J12902_102395098	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300002245\|JGIcombinedJ26739_100307410	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300003267\|soilL1_10031857	All Organisms → cellular organisms → Bacteria	3132	Open in IMG/M
3300004114\|Ga0062593_101398510	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300004156\|Ga0062589_102501377	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300004480\|Ga0062592_101189864	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005175\|Ga0066673_10367172	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005176\|Ga0066679_10688377	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005293\|Ga0065715_10443729	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005439\|Ga0070711_101406619	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005451\|Ga0066681_10671834	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005454\|Ga0066687_10029489	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300005539\|Ga0068853_100975943	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005549\|Ga0070704_101952295	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005563\|Ga0068855_102546459	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005575\|Ga0066702_10410924	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005598\|Ga0066706_11335217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300005614\|Ga0068856_100653156	Not Available	1072	Open in IMG/M
3300005843\|Ga0068860_101673889	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300006169\|Ga0082029_1510926	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300006169\|Ga0082029_1715993	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300006791\|Ga0066653_10357682	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300006796\|Ga0066665_10470869	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300006845\|Ga0075421_101650237	Not Available	695	Open in IMG/M
3300006845\|Ga0075421_102509166	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006846\|Ga0075430_101556587	Not Available	543	Open in IMG/M
3300006847\|Ga0075431_100673341	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006847\|Ga0075431_101974506	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006854\|Ga0075425_101540295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	750	Open in IMG/M
3300006854\|Ga0075425_101829638	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300006914\|Ga0075436_100138732	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300006918\|Ga0079216_11197694	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300007076\|Ga0075435_100933941	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300007076\|Ga0075435_101443825	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300007076\|Ga0075435_101570204	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300009012\|Ga0066710_104684155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300009093\|Ga0105240_12541393	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009094\|Ga0111539_11643696	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009137\|Ga0066709_100765705	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300009137\|Ga0066709_104258605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	521	Open in IMG/M
3300009147\|Ga0114129_11603194	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300009156\|Ga0111538_10540055	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300009156\|Ga0111538_11481661	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300010038\|Ga0126315_10955581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300010040\|Ga0126308_10727804	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300010303\|Ga0134082_10441186	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010359\|Ga0126376_12804214	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010400\|Ga0134122_10119052	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300011439\|Ga0137432_1024991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1737	Open in IMG/M
3300012004\|Ga0120134_1014231	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1236	Open in IMG/M
3300012208\|Ga0137376_10601959	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300012211\|Ga0137377_11946767	Not Available	504	Open in IMG/M
3300012360\|Ga0137375_10475947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300012960\|Ga0164301_10873713	Not Available	695	Open in IMG/M
3300012986\|Ga0164304_10005600	All Organisms → cellular organisms → Bacteria	5102	Open in IMG/M
3300013308\|Ga0157375_12486025	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300014054\|Ga0120135_1005662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1264	Open in IMG/M
3300015164\|Ga0167652_1081771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300015199\|Ga0167647_1007776	All Organisms → cellular organisms → Bacteria	3446	Open in IMG/M
3300015371\|Ga0132258_11630450	All Organisms → cellular organisms → Bacteria → Acidobacteria	1628	Open in IMG/M
3300015374\|Ga0132255_102793741	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300015374\|Ga0132255_103862697	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300017654\|Ga0134069_1197221	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300018052\|Ga0184638_1324396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300018075\|Ga0184632_10465489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300018076\|Ga0184609_10587965	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300018469\|Ga0190270_10357468	All Organisms → cellular organisms → Bacteria → Acidobacteria	1331	Open in IMG/M
3300018482\|Ga0066669_10931902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	780	Open in IMG/M
3300019883\|Ga0193725_1087870	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300021344\|Ga0193719_10301884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300021363\|Ga0193699_10006402	All Organisms → cellular organisms → Bacteria	4247	Open in IMG/M
3300021363\|Ga0193699_10367324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300022756\|Ga0222622_11374485	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300024049\|Ga0233359_1044744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300025796\|Ga0210113_1023632	Not Available	1262	Open in IMG/M
3300025901\|Ga0207688_10167696	Not Available	1304	Open in IMG/M
3300025904\|Ga0207647_10662894	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300025917\|Ga0207660_11493715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300025921\|Ga0207652_10442781	Not Available	1171	Open in IMG/M
3300025924\|Ga0207694_11420874	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300025930\|Ga0207701_10466906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300025936\|Ga0207670_10992856	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300025941\|Ga0207711_11487309	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300025945\|Ga0207679_10287973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1411	Open in IMG/M
3300025972\|Ga0207668_10361346	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300025996\|Ga0208777_1006175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300026023\|Ga0207677_12074769	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300026088\|Ga0207641_10092207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2653	Open in IMG/M
3300026312\|Ga0209153_1231033	Not Available	609	Open in IMG/M
3300026322\|Ga0209687_1205413	Not Available	608	Open in IMG/M
3300026508\|Ga0257161_1057261	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300027324\|Ga0209845_1032233	Not Available	842	Open in IMG/M
3300027727\|Ga0209328_10134614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300028380\|Ga0268265_10683125	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300028536\|Ga0137415_11013302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300028811\|Ga0307292_10395134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300028814\|Ga0307302_10173129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1050	Open in IMG/M
3300028814\|Ga0307302_10209488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	952	Open in IMG/M
3300028889\|Ga0247827_10217869	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031229\|Ga0299913_11541185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	617	Open in IMG/M
3300031538\|Ga0310888_10506252	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300031562\|Ga0310886_10759280	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031854\|Ga0310904_11439287	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300031901\|Ga0307406_10398308	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300031911\|Ga0307412_11337243	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300031944\|Ga0310884_10138213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300031995\|Ga0307409_101551301	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300032000\|Ga0310903_10223196	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300032005\|Ga0307411_11501443	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032012\|Ga0310902_10883948	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032017\|Ga0310899_10024289	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300032179\|Ga0310889_10489688	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300033407\|Ga0214472_11349982	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300033412\|Ga0310810_10746196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300033475\|Ga0310811_10086520	All Organisms → cellular organisms → Bacteria	4099	Open in IMG/M
3300033811\|Ga0364924_163985	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300034819\|Ga0373958_0156210	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.75%
Host-Associated	Host-Associated	30.47%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.28%
Plants	Host-Associated → Plants	30.47%
Aquatic	Environmental → Aquatic	5.47%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.16%
Sediment	Environmental → Aquatic → Sediment	4.69%
Marine	Environmental → Aquatic → Marine	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.97%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.56%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_05104340	2124908045	Soil	MARKIVYWGSTTIVCLMLLFALMYLTGTEQVVSGFAKAGYPQHLRI
4ZMR_01785390	2170459017	Switchgrass, Maize And Mischanthus Litter	MIRKIAYWSSTALVAASLLMALTYLTGSEQVVSGFT
ICChiseqgaiiDRAFT_20017813	3300000033	Soil	MVRKVAYWIXTGIVSAGLLFSXIYLTGSEQVVSGFAKAG
F12B_109583972	3300000443	Soil	MIPKVAYWGSTGIAALMLLAAASYLTGSEEVVSGFAKAGYPQ
F24TB_100191212	3300000550	Soil	MVRTVAYWTTTAIAALALLGSLSYLTGSEQVVSGFTKAGY
F24TB_139043591	3300000550	Soil	MALKITYWVSTILAAVMLGFALSYLTGNEQVVTGFNHLGYPQHL
JGI11643J11755_112261981	3300000787	Soil	MTRKIAYWCSTVIVALALLGSLSYLTGSEQVVSGFA
JGI10214J12806_130089751	3300000891	Soil	MVRKIAYWGSTVLAAVSLLGALSYLIGNEQAIAGFAKAGYPQH
JGI1027J12803_1056183341	3300000955	Soil	MTRNIAYWASTAIVAVMLLMALSYLTGSEQVVSGFAKAGYPQ
JGI1027J12803_1061491492	3300000955	Soil	MARTIAYWATTAIVALALLGSLSYLTGNEQVVSGFAKAG
JGI10216J12902_1023950984	3300000956	Soil	MPRTITSWASTGIVSVMLLMALSYLTGNEQVVAGF
JGIcombinedJ26739_1003074103	3300002245	Forest Soil	MARKVAYWTSTALVSAALLMAVTYLSGSEQVVSGFA
soilL1_100318571	3300003267	Sugarcane Root And Bulk Soil	VPRTIGYWITTAILALALLGSLTYLTGSEEVVSGFAKAGYP
Ga0062593_1013985101	3300004114	Soil	MKGRKIAYWVATIIVGVGLLGALSYLTGNEQVVSGFAKAGYPQHLRIVLGLAKPAAAIV
Ga0062589_1025013772	3300004156	Soil	MGRKIAYWGSTAIVGFALLGSLSYLTGNEQVVSGFAKAGYPQHLRIV
Ga0062592_1011898641	3300004480	Soil	MKGRKIAYWVATIIVGVGLLGALSYLTGNEQVVSGFAKAGYPQHLRIVL
Ga0066673_103671722	3300005175	Soil	MARKIAYWTSTVIVAVMLLFALSYLTGNPQVVSGFAKAGYPP
Ga0066679_106883772	3300005176	Soil	MGRKIAYWTTTTIAGVMLLMSLTYLTGNEQVVSGFAKAGYPQHLRIVLG
Ga0065715_104437291	3300005293	Miscanthus Rhizosphere	MPRTITYWASTGIVSVMLLLALSYLTGNEQVVSGFAKAGWPQLLRIVLGVAK
Ga0070711_1014066192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSRKIVYWSATALACLALLGSLSYLTGSQQVVEGFAKAGY
Ga0066681_106718342	3300005451	Soil	MARKIAYWTSTAIACLALFGSLTYLTGSQEVVAGFAKAGY
Ga0066687_100294891	3300005454	Soil	MARKVAYWTSTVIACLALFGALTYLSGSAEVAAGFAKAGYPQHLRIVLGI
Ga0068853_1009759432	3300005539	Corn Rhizosphere	MAQKVAYWISTGLASLALLGSLTYLTGSEEVVAGFTKAGYPQHLR
Ga0070704_1019522951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MARKIAYWGSTAITCLGLIAALTYLTGNEQVVSGFVKAGYPQHLRIALG
Ga0068855_1025464592	3300005563	Corn Rhizosphere	MGRKIAYWVSTVIACLALFGSLTYLSGSEQVVEGFAKA
Ga0066702_104109242	3300005575	Soil	MARKVAYWTSTVIACLALFGALTYLSGSAEVAAGFAKAGYPQHLRIVLGIAKPI
Ga0066706_113352172	3300005598	Soil	MAPKIAYWTSTVIACLALFASLTYLTGSEQVVAGFAKAG
Ga0068856_1006531563	3300005614	Corn Rhizosphere	MGRKIAYWVSTAIVGVMLLMALSYLTGNEQVVSGFVKSGYP
Ga0068860_1016738893	3300005843	Switchgrass Rhizosphere	MGRKIAYWVSTAIVGVMLLMALSYLTGNEQVVSGFVKSGYPQHLRIVL
Ga0082029_15109261	3300006169	Termite Nest	MRGKIAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGYPQHLGIVLGLAKPAAAIV
Ga0082029_17159931	3300006169	Termite Nest	MMGRKIAYWVSTVIVGVGLLGALSYLTGNEQVVSGFAKAGYPQHL
Ga0066653_103576822	3300006791	Soil	MARKIAYWTSTVIVAVMLLFALSYLTGNPQVVSGFAKAGYPPHL
Ga0066665_104708692	3300006796	Soil	MARKIAYWTSTVIVAVMLLFALSYLTGNPQVVSGFA
Ga0075421_1016502372	3300006845	Populus Rhizosphere	MARKIAFWTSTGIVAVMLLFALSYLTGSQQVVEGFTKA
Ga0075421_1025091661	3300006845	Populus Rhizosphere	MVRTVAYWGSTAIVGAMLLLALSYLTGNEQVVTGFTKAGYPQHLRIVLG
Ga0075430_1015565871	3300006846	Populus Rhizosphere	MRRTIAYWSTTAIVALMLLGSLSYLTGNEQVVSGFA
Ga0075431_1006733413	3300006847	Populus Rhizosphere	MARTVAYWTTTAIAALMLLFSLSYLTGNEQVVNGFAKAGYPQHLRIVLG
Ga0075431_1019745061	3300006847	Populus Rhizosphere	MVRTVAYWGSTAIVGAMLLLALSYLTGNEQVVTGFTKAGYPQHLRIVLGIVKP
Ga0075425_1015402951	3300006854	Populus Rhizosphere	MARKIAYWGSTAIVAVSLLDALTYLTGNEQVVSGF
Ga0075425_1018296382	3300006854	Populus Rhizosphere	VNRYVYWVTTSIVGLALLGSLSYLTGSEQVVTGFTKAGY
Ga0075436_1001387321	3300006914	Populus Rhizosphere	MGRKIAYWVSTVIACLALFGSLTYLSGSEQVVEGFAKAGYPQHLRI
Ga0079216_111976941	3300006918	Agricultural Soil	MGRKIAYWGSTVLAGLALLGSLSYLTGNEQVVTGFTKAGYPQLLRIVLGLAKPAAAIV
Ga0075435_1009339412	3300007076	Populus Rhizosphere	MTRKIAYWSSTAIVAVALLGALTYLTGSEQVVSGFAKAGYPQH
Ga0075435_1014438252	3300007076	Populus Rhizosphere	MGRKIAYWVSTVIACLALFGSLTYLSGSEQVVEGFAKAG
Ga0075435_1015702041	3300007076	Populus Rhizosphere	MVRKIAYWSSTALVATMLLLALSYLTGNQQVVSGFARSGYPQH
Ga0066710_1046841551	3300009012	Grasslands Soil	MARKIAYWTSTVVACLALFGSLTYLTGSAEVVAGFAKAGYPQHLRIV
Ga0105240_125413932	3300009093	Corn Rhizosphere	MPRRIAYWTTTAIVSVMLLGSLSYLTGDEQVVTGFTKAGYPQHLRIVLGIAKP
Ga0111539_116436962	3300009094	Populus Rhizosphere	VTRKIAYWCSTVIVALALLGSLSYLTGSEQVVSGF
Ga0066709_1007657051	3300009137	Grasslands Soil	QPLHSGGYMVRKIVYWTSTVIVAVMLLFALSYLTGNPQVVSGFTKAG*
Ga0066709_1042586052	3300009137	Grasslands Soil	MIQSSRREFMARKIAYWTSTALACLALFGSLTYLTGSAEVVAGFAKAGYPQHLRIVL
Ga0114129_116031941	3300009147	Populus Rhizosphere	MARRVVYWGTTGLVALALLGSLSYLTGNEAVVAGFAKAGYPQHL
Ga0111538_105400551	3300009156	Populus Rhizosphere	MKGRKIAYWVATIIVGVGLLGALSYLTGNEQVVSGFA
Ga0111538_114816612	3300009156	Populus Rhizosphere	MGRRKIAYWGTTALAGVALLGALSYLTGNEQVVSGFAKAGYPQHLRIVLG
Ga0126315_109555811	3300010038	Serpentine Soil	MARRIAYWGSTALTGLGLIAALGYLTGNAEVVSGFTRAG
Ga0126308_107278043	3300010040	Serpentine Soil	MVQKTAYWGSTAIVAVMLLMALSYLTGNEQVVTGFAKA
Ga0134082_104411861	3300010303	Grasslands Soil	MARKIAYWSSTVIACLALFGSLSYLSGSAEVVSGFAKAGYPQHL
Ga0126376_128042141	3300010359	Tropical Forest Soil	MKMAGKIGFWASTGIVAATLLFALSYLTGNPQVVEGFTKAGYPQHLRIVLGILK
Ga0134122_101190523	3300010400	Terrestrial Soil	MGRKIAYWVSTAIVGVMLLMALSYLTGNEQVVSGFVK
Ga0137432_10249914	3300011439	Soil	MARKVVYWGSTAIVSLMLLMSLSYLTGSEQVVSGF
Ga0120134_10142311	3300012004	Permafrost	LNPRRIVYWGSTSLVALSLLMALTYLSGSEQVVAGFAKAGYPQ
Ga0137376_106019591	3300012208	Vadose Zone Soil	MARKIAYWGSTALLCLALFGALSYLTGSEQVVAGF
Ga0137377_119467671	3300012211	Vadose Zone Soil	MARKIAYWGSTAIACLALLASVTYLSGNEQVVSGFAKAGYPQHL
Ga0137375_104759471	3300012360	Vadose Zone Soil	MARKIAYWTSTVIAAAMLSFALTYLTGNPTVVEGFNHLGYPQHLRL
Ga0164301_108737132	3300012960	Soil	MEGKKIVYWGSTALACLALFGSLTFLTGSQQVVEGFAKA
Ga0164304_100056005	3300012986	Soil	MTRNIAYWASTAIVAVALLGALTYLTGSEQVVSGFAKAGYPQH
Ga0157375_124860252	3300013308	Miscanthus Rhizosphere	MPRTITYWASTGIVSVMLLLALSYLTGNEQVVSGFAKAGWPQLLRIVLG
Ga0120135_10056621	3300014054	Permafrost	LNPRKIVYWGSTSLVALSLLMALTYLSGSEQVVAGFAKAGYPQHLRIVLGIVKP
Ga0167652_10817711	3300015164	Glacier Forefield Soil	MVKRIAYWSSTAIAAASLLMAVTYLSGSEQVVSGFAKAGYPQHLR
Ga0167647_10077765	3300015199	Glacier Forefield Soil	MVKRIAYWSSTAIAAASLLMAVTYLSGSEQVVSGFAKAG
Ga0132258_116304501	3300015371	Arabidopsis Rhizosphere	MGRTVAYWSTTVIVSFALLGSLSYLTGNEQVVSGFAKAGYPQHLRIVLGFAKPA
Ga0132255_1027937411	3300015374	Arabidopsis Rhizosphere	VSRKIGYWVSTAILALALLGSLTYLTGSEQVVSGFAKAGYPQHL
Ga0132255_1038626972	3300015374	Arabidopsis Rhizosphere	VSRTIGHRRIGYWISTGLLALALLGSLSYLTGSEQ
Ga0134069_11972212	3300017654	Grasslands Soil	MARKIAYWTSTVIVAVMLLFALSYLTGNPQVVSGFAKAGYPPHLRIV
Ga0184638_13243962	3300018052	Groundwater Sediment	MVRKVAYWISTVIVSVMLLFALIYLAGSEQVVSGFAKTGYP
Ga0184618_104049302	3300018071	Groundwater Sediment	MVRKIAYWASTIIAAVMLGFALSYLTGSPQVVAGFDHLG
Ga0184632_104654892	3300018075	Groundwater Sediment	MARKIAYWISTAIGCLALFGSLTYLTGSEEVVAGFAKAGY
Ga0184609_105879651	3300018076	Groundwater Sediment	MVRKIAYWSSTTIVAVMLLFALIYLSGNEQVVSGFAKAGYPQHL
Ga0190270_103574682	3300018469	Soil	MGRRIAYWGTTAIVGFALLGSLSYLTGNEQVVSGFAK
Ga0066669_109319023	3300018482	Grasslands Soil	MARKIIYWTSTALACLALLGSLTYLTGSQEVVAGFAKAGY
Ga0193725_10878702	3300019883	Soil	MVRRIAYWGSTALACLALLGSLSYLTGSEQVVAGFAKAGYP
Ga0193719_103018841	3300021344	Soil	MARKIAYWGPTALACLALLGSLTYLTGSEQVVSGFAK
Ga0193699_100064021	3300021363	Soil	LNPRKIVYWGSTSLVALSLLMALTYLSGSEQVVSG
Ga0193699_103673241	3300021363	Soil	LNPRKIVYWGSTSLVALSLLMALTYLSGSEQVVSGFAKA
Ga0222622_113744851	3300022756	Groundwater Sediment	MALKIAYWASTVIAAVMLGFALSYLTGNEQVVTGFTHLGYPQHLR
Ga0233359_10447441	3300024049	Soil	MVRKIAYWSTTAIAAASLLAAVTYLSGSEQVVSGFAKAGYPQHLRI
Ga0210113_10236322	3300025796	Natural And Restored Wetlands	MTRRIAYWCSTVIVALALLGSLSYLTGSEQVVSGFARSGYPQHL
Ga0207688_101676961	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRKIAYWVATIIVGVGLLGALSYLTGNEQVVSGFAK
Ga0207647_106628942	3300025904	Corn Rhizosphere	MKGRKIAYWVATIIVGVGLLGALSYLTGNEQVVSGFAKAGYPQHLRIVLGL
Ga0207660_114937151	3300025917	Corn Rhizosphere	LNSRTIVYWGSTSLVALSLLMALTYLTSSEQVVSGFAK
Ga0207652_104427811	3300025921	Corn Rhizosphere	MARKVVYWVSTSLVCLALFGSLSYLTGSAQVVEGFAKA
Ga0207694_114208742	3300025924	Corn Rhizosphere	MGRKIAYWVSTAIVGVMLLMALSYLTGNEQVVSGFVKSGYPQHLRIVLGIAKPAA
Ga0207701_104669062	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGKKVAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGY
Ga0207670_109928561	3300025936	Switchgrass Rhizosphere	VARKLAYWISTALVAVALLGSLTYLTGSEQVVSGFAKAGYPQHLRIVLG
Ga0207711_114873091	3300025941	Switchgrass Rhizosphere	MGRKIAYWVSTAIVGVMLLMALSYLTGNEQVVSGFVKSGYPQHLRIVLGIAKP
Ga0207679_102879731	3300025945	Corn Rhizosphere	MAQKIVYWSSTVIACLALLGSLSYLTGSEEVVAGFAKA
Ga0207668_103613463	3300025972	Switchgrass Rhizosphere	MPRRIAYWTTTAIVSVMLLGSLSYLTGNEQVVTGFTKAGYPQ
Ga0208777_10061751	3300025996	Rice Paddy Soil	MARKIVYWSSTAIACLALLGSLTYLTGSREVVEGFAKAGYPQHLRIVLGIA
Ga0207677_120747692	3300026023	Miscanthus Rhizosphere	MGKKVAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGYPQHLRIVLGLAKP
Ga0207641_100922071	3300026088	Switchgrass Rhizosphere	MTQKIAYWTSTAIVAVMLLMALSYLTGSEQVVSGFAK
Ga0209153_12310332	3300026312	Soil	MVQKIAYWVSTVIVCLALFGSLTYLTGSEQVVAGFA
Ga0209687_12054132	3300026322	Soil	MARKVAYWTSTVIACLALFGALTYLSGSAEVAAGFAK
Ga0257161_10572612	3300026508	Soil	MARKIAYWGSTGLACLALLGSLSYLTGSEQVVAGFTKA
Ga0209845_10322331	3300027324	Groundwater Sand	MVRKIAYWSSTAIAAIALLLALSYLTGNEQVVSGFAKAGYPQHLRIVLGI
Ga0209328_101346141	3300027727	Forest Soil	MARKVAYWTSTALVSAALLMAVTYLSGSEQVVSGFAKAGYPQHLRIVLG
Ga0268265_106831251	3300028380	Switchgrass Rhizosphere	MPRRIAYWTTTAIVSVMLLGSLSYLTGNEQVVTGFTKAGYPQH
Ga0137415_110133021	3300028536	Vadose Zone Soil	MARKTAYWISTALASLALLGALTYLTGSEQVVSGFAKVGYPQHLRI
Ga0307292_103951341	3300028811	Soil	MARKIVYWGATALVSVALLGSLTYLTGSEQVVAGFTKAGYPQYLRIIL
Ga0307302_101731292	3300028814	Soil	MVRKIAYWGPTALACLALLGSLTYLTGSDQVVSGFAKAGYPQHLRIVLGIAK
Ga0307302_102094881	3300028814	Soil	MARKITYWTSTAIACLALFGSLTYLTGSEEVVAGFAKA
Ga0247827_102178693	3300028889	Soil	MTRKIAYWCSTVIVALALLGSLSYLTGSEQVVSGFTRSGYP
Ga0299913_115411852	3300031229	Soil	MARKVAYWISTVIVAVALLGSLTYLTGSEQVVSGFAKAGYP
Ga0310888_105062521	3300031538	Soil	MGRKIAYWVSTVIVGVGLLGALSYLTGNEQVVSGFAKAGYPQHLR
Ga0310886_107592801	3300031562	Soil	MPRTITYWASTGIVSVMLLMALSYLTGNEQVVAGFAKA
Ga0310904_114392871	3300031854	Soil	MGQKVAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGY
Ga0307406_103983082	3300031901	Rhizosphere	MGQKVAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGYPQH
Ga0307412_113372432	3300031911	Rhizosphere	MLRKIAYWGSTAITGLGLIAALSYLTGNDQVVSGFVKAGY
Ga0310884_101382132	3300031944	Soil	MGRKIAYWGSTAIVGFALLGSLSYLTGNEQVVSGFAKAGYP
Ga0307409_1015513011	3300031995	Rhizosphere	MGQKVAYWGSTALVGVALLGALSYLTGNEQVVSGFAKAGYPQHL
Ga0310903_102231961	3300032000	Soil	MGRKIAYWGSTAIVGFALLGSLSYLTGNEQVVSGFAKAGYPQHLRIVLGFAKPAAAI
Ga0307411_115014431	3300032005	Rhizosphere	MGHKVAYWGSTALVGVALLGSLSYLTGNEQVVSGF
Ga0310902_108839482	3300032012	Soil	MGRTIAYWSTTTLVALALLGSLSYLTGSEQVVSGFAKAGYPQH
Ga0310899_100242893	3300032017	Soil	MGRKIAYWGSTAIVGFALLGSLSYLTGNEQVVSGFAKAGYPQHLRIVLG
Ga0310889_104896881	3300032179	Soil	MGRTIAYWSTTTLVALALLGSLSYLTGSEQVVSGFAKAGYPQHLR
Ga0214472_113499822	3300033407	Soil	TRTIVYWIATVIVALMLLTSLSDLTGSEQVVSGFEKAG
Ga0310810_107461961	3300033412	Soil	MARKVAYWISTVIVGVMLGFALTYLTGSAQIVEGFKHLGYP
Ga0310811_100865201	3300033475	Soil	MTRYLYWGSTALVALALLGSLSYLTGSVQVVSGFTM
Ga0364924_163985_3_116	3300033811	Sediment	MARTIAYWTTTVIVAVMLLFALSYLTGNAQVVSGFANA
Ga0373958_0156210_447_572	3300034819	Rhizosphere Soil	MTRKIAYWASTAIVAVALLGALTYLTGSEQVVSGFAKAGYPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences