Metagenome / Metatranscriptome Family F065079

Basic Information
Family ID	F065079
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	64 residues
Representative Sequence	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Number of Associated Samples	101
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.71 %
% of genes near scaffold ends (potentially truncated)	75.78 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (59.375 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.062 % of family members)
Environment Ontology (ENVO)	Unclassified (26.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.719 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1JGI12712J15308_101883011 2JGIcombinedJ26739_1000072791 3JGI26339J46600_100019598 4Ga0062384_1000174631 5Ga0062389_1024742161 6Ga0058901_13534461 7Ga0058899_114218821 8Ga0062388_1005594562 9Ga0062388_1014667482 10Ga0070730_108889862 11Ga0070731_100737354 12Ga0070731_105538283 13Ga0070763_100320611 14Ga0070763_108606442 15Ga0070766_100069521 16Ga0070766_109071781 17Ga0066787_100820383 18Ga0075028_1001344472 19Ga0075030_1002177401 20Ga0075030_1015544691 21Ga0075018_101706741 22Ga0075014_1010041372 23Ga0070765_1006084481 24Ga0070765_1018638741 25Ga0075424_1023163761 26Ga0116119_11390931 27Ga0116117_12097162 28Ga0116120_10273724 29Ga0105857_10877833 30Ga0116101_10781621 31Ga0136449_1014503503 32Ga0136449_1019649571 33Ga0136449_1039904741 34Ga0181532_104130852 35Ga0181526_110450632 36Ga0181537_100886293 37Ga0182018_100709581 38Ga0182018_105331012 39Ga0182018_105650832 40Ga0182015_110502511 41Ga0181525_101456162 42Ga0181525_101752323 43Ga0182030_1000141853 44Ga0187802_100958612 45Ga0187801_103039171 46Ga0187821_101043512 47Ga0187819_100217984 48Ga0187779_109485161 49Ga0187778_104442871 50Ga0187869_100951053 51Ga0187883_100533221 52Ga0187883_104566221 53Ga0187772_101025592 54Ga0210407_101901441 55Ga0210403_100608861 56Ga0210399_107530392 57Ga0210399_115033451 58Ga0210395_112440301 59Ga0210401_109957912 60Ga0210406_103587181 61Ga0210400_116356821 62Ga0210396_105166472 63Ga0210386_107867381 64Ga0210384_111321001 65Ga0210391_101349031 66Ga0210391_102777101 67Ga0210409_113034712 68Ga0210409_115430432 69Ga0242657_10042303 70Ga0224550_10040201 71Ga0224544_10462651 72Ga0224551_10391821 73Ga0208219_10501231 74Ga0209584_103091211 75Ga0209008_11454551 76Ga0209330_10723431 77Ga0209625_10118511 78Ga0209772_100282503 79Ga0209139_101165731 80Ga0209274_100874913 81Ga0209693_100330081 82Ga0209275_101679062 83Ga0209068_100037857 84Ga0209698_102247114 85Ga0302224_101252012 86Ga0302269_11219571 87Ga0302225_102808122 88Ga0302189_101346911 89Ga0302155_102419521 90Ga0302154_106125201 91Ga0311362_106222581 92Ga0311340_106432961 93Ga0311340_106536191 94Ga0311352_104724103 95Ga0311346_105748432 96Ga0311339_100201311 97Ga0311339_102199611 98Ga0311338_105287602 99Ga0302179_103953972 100Ga0311353_107859892 101Ga0311370_100113181 102Ga0311372_124585961 103Ga0311356_106390083 104Ga0311354_114494141 105Ga0265753_10259512 106Ga0075386_108621732 107Ga0302307_106840811 108Ga0302325_100897551 109Ga0302325_102454711 110Ga0302325_121645541 111Ga0302320_115687931 112Ga0318561_101976661 113Ga0310686_1067409793 114Ga0310686_1095387711 115Ga0310686_1103688613 116Ga0310686_1130442891 117Ga0310686_1134824512 118Ga0310686_1134921571 119Ga0310686_1178221742 120Ga0307476_106061682 121Ga0307474_108094621 122Ga0307477_105652982 123Ga0307475_114774441 124Ga0307475_115346001 125Ga0307478_102369522 126Ga0307478_103577791 127Ga0335069_104048424 128Ga0370515_0378632_3_203
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1JGI12712J15308_101883011 2JGIcombinedJ26739_1000072791 3JGI26339J46600_100019598 4Ga0058901_13534461 5Ga0062388_1005594562 6Ga0070731_100737354 7Ga0070766_100069521 8Ga0075030_1015544691 9Ga0075018_101706741 10Ga0075014_1010041372 11Ga0182018_105650832 12Ga0187802_100958612 13Ga0187778_104442871 14Ga0210391_101349031 15Ga0302325_121645541 16Ga0318561_101976661
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1JGIcombinedJ26739_1000072791 2JGI12712J15308_101883011 3JGI26339J46600_100019598 4Ga0058899_114218821 5Ga0070731_100737354 6Ga0075014_1010041372 7Ga0116117_12097162 8Ga0105857_10877833 9Ga0182018_105650832 10Ga0187779_109485161 11Ga0187778_104442871 12Ga0210399_115033451 13Ga0210391_101349031 14Ga0210409_115430432 15Ga0209625_10118511 16Ga0311362_106222581 17Ga0265753_10259512 18Ga0302325_121645541 19Ga0302320_115687931 20Ga0318561_101976661 21Ga0335069_104048424
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.96% Coil/Unstructured: 56.04%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00406	ADK	2.34
PF02627	CMD	1.56
PF01070	FMN_dh	1.56
PF02687	FtsX	1.56
PF00239	Resolvase	1.56
PF03544	TonB_C	1.56
PF00535	Glycos_transf_2	1.56
PF01451	LMWPc	1.56
PF13545	HTH_Crp_2	1.56
PF01546	Peptidase_M20	1.56

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	2.34
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.34
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.56
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.56
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.56
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.56
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.56
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.56
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.56

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.34 %
Unclassified	root	N/A	40.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.06 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Unclassified	root	N/A	40.62 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Unclassified	root	N/A	40.62 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Unclassified	root	N/A	40.62 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10188301	Not Available	540	Open in IMG/M
3300002245\|JGIcombinedJ26739_100007279	All Organisms → cellular organisms → Bacteria	8727	Open in IMG/M
3300004082\|Ga0062384_100017463	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300004092\|Ga0062389_102474216	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300004120\|Ga0058901_1353446	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004631\|Ga0058899_11421882	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004635\|Ga0062388_101466748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	688	Open in IMG/M
3300005537\|Ga0070730_10888986	Not Available	559	Open in IMG/M
3300005538\|Ga0070731_10073735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2264	Open in IMG/M
3300005610\|Ga0070763_10032061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2409	Open in IMG/M

Showing 1 to 10 of 111 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	23.44%
Plants	Host-Associated → Plants	0.78%
Terrestrial	Environmental → Terrestrial	75.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	17.97%
Peat	Environmental → Terrestrial → Peat	21.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%
Sediment	Environmental → Aquatic → Sediment	5.47%
Soil	Environmental → Terrestrial → Soil	53.91%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.38%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.56%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.91%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.47%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.06%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.34%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.34%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.34%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.34%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.47%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M

Showing 1 to 10 of 101 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101883011	3300001471	Forest Soil	MAGMTVVFRSGKVTVTEGLGGPMEFECWTDGGKIVMYKAGSSTPFSYGFDVNNDGTLQTPLGAIKKMGK*
JGIcombinedJ26739_1000072791	3300002245	Forest Soil	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
JGI26339J46600_100019598	3300003218	Bog Forest Soil	GLGGPMEFECWTGGGHIVMYKAGSFTPFSYGFDINNDGTLQTPLGVIKKMGN*
Ga0062384_1000174631	3300004082	Bog Forest Soil	VFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN*
Ga0062389_1024742161	3300004092	Bog Forest Soil	VVFRSGKATITEGLGGEMLFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0058901_13534461	3300004120	Forest Soil	ITEGVSELGPFDCFTGGGKVVFYEAGSFKPFAYDFDINLDGTLQTPLGGIKKMGN*
Ga0058899_114218821	3300004631	Forest Soil	KATITEGVSELGPFDCFTGGGKVVFYEAGSFKPFAYDFDINLDGTLQTPLGGIKKMGN*
Ga0062388_1005594562	3300004635	Bog Forest Soil	MLFDCFTGDGKVVFYKAGSFTPFSYDFDVNNDGTLQTPLGAIKKMGN*
Ga0062388_1014667482	3300004635	Bog Forest Soil	FRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN*
Ga0070730_108889862	3300005537	Surface Soil	MGGMKVVFRSGKATITEGLGGEMLFGCFSGDGTVVFYKAGSFTPFSYDFDINNGGTLQTPLGAIKKMGN*
Ga0070731_100737354	3300005538	Surface Soil	EGRWEHVSGMGGMTVIFRSGKVTVSGGLGGDDHFDCFLGDGKLILYKPGSFTPESFGFDINNDGTLQTPLGAIKKMGN*
Ga0070731_105538283	3300005538	Surface Soil	DCFTGGEKVVFYEAGSFTPFAYDFDINLDGTLQTPLGALKKMGN*
Ga0070763_100320611	3300005610	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0070763_108606442	3300005610	Soil	MKVVFRSGKATITEGLGGEMLFDCFTGDGKIAFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0070766_100069521	3300005921	Soil	DFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN*
Ga0070766_109071781	3300005921	Soil	RWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0066787_100820383	3300005950	Soil	EMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075028_1001344472	3300006050	Watersheds	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGK*
Ga0075030_1002177401	3300006162	Watersheds	GMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075030_1015544691	3300006162	Watersheds	SCAGKYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMLFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN*
Ga0075018_101706741	3300006172	Watersheds	MGCMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTL
Ga0075014_1010041372	3300006174	Watersheds	AVNELGPFDCFMGGGQVILYEAGSFKPFETLETNTDGTLQTELGAIKKMGN*
Ga0070765_1006084481	3300006176	Soil	HVSGMGGMRVVFHSGKATITEALGGEMPFDCFTGGGKVVFYKAGSFTPFSYDFDVNNDGTLQTPLGAIKKMGN*
Ga0070765_1018638741	3300006176	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATISEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075424_1023163761	3300006904	Populus Rhizosphere	VTVTGGLGGPEEFECWIGGGHISLYKAGSSTPLSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0116119_11390931	3300009629	Peatland	MGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0116117_12097162	3300009635	Peatland	GMKVIFRSGNATITEGLGGDMPFECFTGGSKVAFYKPGSFKPFDYDFDINNDGTLQTPLGAIKKMGN*
Ga0116120_10273724	3300009641	Peatland	KYEGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0105857_10877833	3300009650	Permafrost Soil	SGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFIAFSYDFDINNDGTLETPLGVIKKMGN
Ga0116101_10781621	3300009759	Peatland	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0136449_1014503503	3300010379	Peatlands Soil	VFRSGKATITEGLGGEMPFDCFTGDGKVFFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0136449_1019649571	3300010379	Peatlands Soil	SCAGKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0136449_1039904741	3300010379	Peatlands Soil	TITEGLGGEMPFDCFTGDGKVVFYKAGSFTAFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0181532_104130852	3300014164	Bog	EGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0181526_110450632	3300014200	Bog	EHVSGMGGMKVVFRAGKATITEALGGEMLFDCFTGDGKVVFYKAGSFTPFSYDFDINIDGTLQTPLGAIKKMGN*
Ga0181537_100886293	3300014201	Bog	EHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0182018_100709581	3300014489	Palsa	GMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182018_105331012	3300014489	Palsa	GKYEGRWEHVSGMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182018_105650832	3300014489	Palsa	LGDILPEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIEKMGN*
Ga0182015_110502511	3300014495	Palsa	EMLFDCFTGGGKVVFYKAGSYTPFSYDFDINNDGTLQTPLGAIKKMGK*
Ga0181525_101456162	3300014654	Bog	LGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN*
Ga0181525_101752323	3300014654	Bog	YEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182030_1000141853	3300014838	Bog	MAGMTVVFRSGKATVTEGLSGPMEFECWIGGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN*
Ga0187802_100958612	3300017822	Freshwater Sediment	TVTGGLGGDDHFDCFLGDGKLILYKPGSFTPESFGFEINNDGTLQTPLGAIKKMGN
Ga0187801_103039171	3300017933	Freshwater Sediment	TEGLGGEMPFDCFTGDGKVVSYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0187821_101043512	3300017936	Freshwater Sediment	GGLGADEQFDCFLGDGKLVFYKPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0187819_100217984	3300017943	Freshwater Sediment	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVSYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0187779_109485161	3300017959	Tropical Peatland	KVTITGGLGADEHFDCFLGDGKLIFYQPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0187778_104442871	3300017961	Tropical Peatland	GMTTIFRSGKVTVSGGLGGDDVFDCFIAGRKIVLYKPGSSTPFPLGFDVNNDGTLQTPLGPIKKMGD
Ga0187869_100951053	3300018030	Peatland	TSCAGKYEGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0187883_100533221	3300018037	Peatland	GRWEHVSGMGGMTVVFRSGRATITEGLGGEMPFDCFMGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0187883_104566221	3300018037	Peatland	GLGGEMPFDCFTGGGKVVFYQAGSFTPFAYVFDINNDGTLQTPLGAIKKMGN
Ga0187772_101025592	3300018085	Tropical Peatland	FRSGKVTITGGLGADEHFDCFLGDGKLIFYQPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0210407_101901441	3300020579	Soil	GMGGMKVVFRSGKATITEGLGGEMLFDCFTGNGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0210403_100608861	3300020580	Soil	RSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMG
Ga0210399_107530392	3300020581	Soil	SCAGKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0210399_115033451	3300020581	Soil	SEGLGGPMPFDCFTGGGKVVFYKAGSFKPFDYDFDINNDGTLQTPLTAIKKMGN
Ga0210395_112440301	3300020582	Soil	GMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210401_109957912	3300020583	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210406_103587181	3300021168	Soil	EHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFAPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210400_116356821	3300021170	Soil	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210396_105166472	3300021180	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFKPFSYDFDINDDGTLQTPLGAIKRMGK
Ga0210386_107867381	3300021406	Soil	ITEGLGGDMLFDCFTGDGKVVFYKAGSFQPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210384_111321001	3300021432	Soil	GMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210391_101349031	3300021433	Soil	EHVSGMGGMGVIFRSGHATGEALGGDFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN
Ga0210391_102777101	3300021433	Soil	EGRWEHVSGMGGMKVIFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210409_113034712	3300021559	Soil	GLGGEMLFDCFTGNGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0210409_115430432	3300021559	Soil	MGGITVVFRSGKATVTEGLGGPMEFECWISGSQIVFYKAGSFTPFSYGFDMNNDGTLQTPLGAIKKMGN
Ga0242657_10042303	3300022722	Soil	VSGMGGMKVIFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0224550_10040201	3300022873	Soil	EMPFDCFTGEGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0224544_10462651	3300023250	Soil	SGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQSPLGAIKKMGN
Ga0224551_10391821	3300023259	Soil	MGGMTVIFRSGKATISEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0208219_10501231	3300025625	Arctic Peat Soil	GEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209584_103091211	3300025878	Arctic Peat Soil	VSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKLVFYKAGSFTPFSYDFDINNDGTLETPLGAIKKMGN
Ga0209008_11454551	3300027545	Forest Soil	GLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209330_10723431	3300027619	Forest Soil	GKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209625_10118511	3300027635	Forest Soil	EGRWEHVSGMGGMTVVFRSGKVTITGGLGADEQFDCFLGEGKLVFYKPGSFTPSSFAFEINNDGTLQTPLGAVKKMGN
Ga0209772_100282503	3300027768	Bog Forest Soil	MAGMRVVFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN
Ga0209139_101165731	3300027795	Bog Forest Soil	GLGGEMPFDCFTGEGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209274_100874913	3300027853	Soil	GKYEGRWEHVSGMGGMGVIFRSGHATGEALGGDFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN
Ga0209693_100330081	3300027855	Soil	GGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209275_101679062	3300027884	Soil	VSGMGGMTVVFRSGKVTVTEGLGGPMEFECFTTGSEIVMYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0209068_100037857	3300027894	Watersheds	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGK
Ga0209698_102247114	3300027911	Watersheds	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0302224_101252012	3300028759	Palsa	KYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYRAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302269_11219571	3300028766	Bog	FRSGKATITEGLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302225_102808122	3300028780	Palsa	FSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302189_101346911	3300028788	Bog	GLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302155_102419521	3300028874	Bog	KATITEGLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302154_106125201	3300028882	Bog	GLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTALGAIKKMGN
Ga0311362_106222581	3300029913	Bog	GEMAFDCFTGDSKVVFYKPGSFTPFSYDFDINLDGTLETPLGVIKKMGN
Ga0311340_106432961	3300029943	Palsa	FRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311340_106536191	3300029943	Palsa	EHVSGMEGMKVVFRSGKAMITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311352_104724103	3300029944	Palsa	TEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311346_105748432	3300029952	Bog	KYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311339_100201311	3300029999	Palsa	TITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311339_102199611	3300029999	Palsa	GMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311338_105287602	3300030007	Palsa	MKVAFRSGKATITEGLGGEMPFDCFTGAGKVVFYKAGSFTPFSYDFDVNNDGTLQ
Ga0302179_103953972	3300030058	Palsa	GGEMPLDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311353_107859892	3300030399	Palsa	FRLGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311370_100113181	3300030503	Palsa	ITEGLGGEMPLDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311372_124585961	3300030520	Palsa	GKYEGRWEHVSGMEGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311356_106390083	3300030617	Palsa	EMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311354_114494141	3300030618	Palsa	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0265753_10259512	3300030862	Soil	AGMEVIFRSGAATISEGLGGPMPFDCFTGGGKVVFYKPGSFQPFDYDFAVNNDGTLQTPIGAIKKMGN
Ga0075386_108621732	3300030916	Soil	VVFRSGKATIAEGLGGEMPFDCFTGNGKVVFYKAGSFTPFSYDFDINHDGTLQTPLGAIKKMGN
Ga0302307_106840811	3300031233	Palsa	EHVSGMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302325_100897551	3300031234	Palsa	FRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302325_102454711	3300031234	Palsa	SGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0302325_121645541	3300031234	Palsa	FRSGKATVIEGLSGSMEFECWIGGGGHISLYEAGSSTPFAYGFDVNNDGTLQTPMGAIKKIGH
Ga0302320_115687931	3300031524	Bog	MAGITVVFRSGKATVTEGLSGPMEFECWIGGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN
Ga0318561_101976661	3300031679	Soil	VSSATLPLSDYQRGKVTITGELGADEQFDCFLGDGQLVFCKPGSFAPSSFAFDINNDGTLQTPLAAIKKMGN
Ga0310686_1067409793	3300031708	Soil	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1095387711	3300031708	Soil	EGMRVVFRSGKATITEGLGGDMQFDCFTGAGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1103688613	3300031708	Soil	ITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1130442891	3300031708	Soil	RWEHVSGMGGMTVVFRSGKVTVTEGLGGPMEFECWMGDGKIVMYKGGSLTPFSYGFDVNNDGTLQTPLGAIKKMGK
Ga0310686_1134824512	3300031708	Soil	RVIFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLQTPLGTIKKMGN
Ga0310686_1134921571	3300031708	Soil	VVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0310686_1178221742	3300031708	Soil	ASCAGKYEGRWEHVSGMAGMTVVFRSGKATVTEGLSGPMEFECWFGGGQISLYKAGSSTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307476_106061682	3300031715	Hardwood Forest Soil	GADEQFDCFLGDGKIVFYKPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0307474_108094621	3300031718	Hardwood Forest Soil	FRSGKATVTEGLGGPMEFECWISGSQISLYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307477_105652982	3300031753	Hardwood Forest Soil	GLGGEMPFDCFTGDGKVVFYKAGSFTSFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307475_114774441	3300031754	Hardwood Forest Soil	MGGMTVVFRSGKATVTEGLGGPMEFECWISGSQIVLYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307475_115346001	3300031754	Hardwood Forest Soil	SGKATITEGLGGGMLFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307478_102369522	3300031823	Hardwood Forest Soil	EGLGGDMLFDCFTGDGKVAFYKTGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307478_103577791	3300031823	Hardwood Forest Soil	VFRSGKATVSEGLGGPMEFECWIGGSQIALYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0335069_104048424	3300032893	Soil	HVSGLGGMTVVFRSGQVTVTGGLGSPEEFECWISGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN
Ga0370515_0378632_3_203	3300034163	Untreated Peat Soil	MKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065079

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences