Metagenome / Metatranscriptome Family F065068

Overview

Basic Information

• Family ID: F065068
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 128
• Average Sequence Length: 44 residues
• Representative Sequence: TGTQHLVTSKGTSNGSTQYAVTVTGSGTSWQVNDIELSSVGQS
• Number of Associated Samples: 124
• Number of Associated Scaffolds: 128

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 99.22 %
• % of genes from short scaffolds (< 2000 bps): 96.88 %
• Associated GOLD sequencing projects: 122
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (98.438 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.562 % of family members)
• Environment Ontology (ENVO): Unclassified (18.750 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (46.875 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 29.58%
  Coil/Unstructured: 70.42%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00877	NLPC_P60	17.97
PF02673	BacA	1.56
PF02910	Succ_DH_flav_C	0.78
PF00037	Fer4	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	17.97
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	1.56

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.44 %
Unclassified	root	N/A	1.56 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.44 %
Unclassified	root	N/A	1.56 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.44 %
Unclassified	root	N/A	1.56 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.66 %
Unclassified	root	N/A	1.56 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	97.66 %
Unclassified	root	N/A	1.56 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	95.31 %
Unclassified	root	N/A	1.56 %

Level 7

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10.94 %
Unclassified	root	N/A	1.56 %

Level 8

Name	Rank	Taxonomy	Distribution
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.56 %
Unclassified	root	N/A	1.56 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001979|JGI24740J21852_10100370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	737
3300002245|JGIcombinedJ26739_101191507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	650
3300003218|JGI26339J46600_10033475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1438
3300005174|Ga0066680_10596673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	692
3300005331|Ga0070670_101120773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	718
3300005332|Ga0066388_101347894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1234
3300005454|Ga0066687_10229178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1027
3300005468|Ga0070707_102113923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530
3300005537|Ga0070730_10880754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	562
3300005553|Ga0066695_10546247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705
3300005554|Ga0066661_10664679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613
3300005561|Ga0066699_10973366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	589
3300005569|Ga0066705_10082537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1879
3300005576|Ga0066708_10567667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729
3300005602|Ga0070762_10509803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789
3300005719|Ga0068861_101844441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	600
3300005921|Ga0070766_11053127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560
3300005952|Ga0080026_10019052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1659
3300006028|Ga0070717_11759001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	560
3300006028|Ga0070717_12121829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	505
3300006172|Ga0075018_10779345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523
3300006174|Ga0075014_100835603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547
3300006796|Ga0066665_11355128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	548
3300006893|Ga0073928_10339092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1116
3300007076|Ga0075435_100340264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1286
3300009089|Ga0099828_11700109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555
3300009520|Ga0116214_1002652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6627
3300009672|Ga0116215_1131669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1115
3300009824|Ga0116219_10513522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662
3300010321|Ga0134067_10354184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578
3300010343|Ga0074044_11008113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300010360|Ga0126372_11369024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739
3300010360|Ga0126372_12434467	All Organisms → cellular organisms → Bacteria	574
3300010398|Ga0126383_13232312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532
3300010880|Ga0126350_11018957	Not Available	579
3300010880|Ga0126350_12259105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501
3300012351|Ga0137386_10296691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163
3300012492|Ga0157335_1006756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840
3300016445|Ga0182038_11774793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557
3300017821|Ga0187812_1215301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613
3300017823|Ga0187818_10366099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638
3300017926|Ga0187807_1328216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512
3300017930|Ga0187825_10446975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500
3300017943|Ga0187819_10481233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709
3300017946|Ga0187879_10173980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1212
3300017955|Ga0187817_11053770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521
3300017959|Ga0187779_10410334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884
3300017961|Ga0187778_10863466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620
3300017966|Ga0187776_10872560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651
3300017972|Ga0187781_10349371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1053
3300017973|Ga0187780_10451383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915
3300017974|Ga0187777_11471333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504
3300018001|Ga0187815_10144914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004
3300018007|Ga0187805_10427202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617
3300018012|Ga0187810_10335006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629
3300018037|Ga0187883_10312361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803
3300018060|Ga0187765_11215170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529
3300018085|Ga0187772_11162864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567
3300018090|Ga0187770_11419593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564
3300019887|Ga0193729_1232135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602
3300019890|Ga0193728_1341937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542
3300021171|Ga0210405_11043438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614
3300021401|Ga0210393_10286064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1338
3300021403|Ga0210397_11306878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563
3300021404|Ga0210389_10209245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1522
3300021405|Ga0210387_10830589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815
3300021406|Ga0210386_10280138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1426
3300021420|Ga0210394_11401737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594
3300021420|Ga0210394_11609227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300021478|Ga0210402_11856356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528
3300021479|Ga0210410_10808491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822
3300021860|Ga0213851_1391037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798
3300024179|Ga0247695_1015111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1083
3300024254|Ga0247661_1113558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516
3300025634|Ga0208589_1022843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761
3300025905|Ga0207685_10352267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743
3300025913|Ga0207695_10939032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745
3300025916|Ga0207663_10156839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1602
3300025928|Ga0207700_10473333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106
3300026078|Ga0207702_10739729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970
3300026089|Ga0207648_11835069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568
3300026538|Ga0209056_10535585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600
3300026999|Ga0207949_1008409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932
3300027371|Ga0209418_1016761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202
3300027568|Ga0208042_1000199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21995
3300027817|Ga0209112_10126248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844
3300027965|Ga0209062_1180852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789
3300028381|Ga0268264_10811545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	935
3300028759|Ga0302224_10416776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300029636|Ga0222749_10677112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564
3300030007|Ga0311338_10556553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1189
3300030046|Ga0302305_1161882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838
3300030706|Ga0310039_10198151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792
3300030739|Ga0302311_10271734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1244
3300030740|Ga0265460_12318765	Not Available	567
3300030743|Ga0265461_11878968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675
3300030906|Ga0302314_11936850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	509
3300031236|Ga0302324_102589789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617
3300031543|Ga0318516_10124671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1470
3300031681|Ga0318572_10448979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767
3300031708|Ga0310686_114571318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559
3300031718|Ga0307474_10636518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	841
3300031748|Ga0318492_10394262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727
3300031764|Ga0318535_10310810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705
3300031771|Ga0318546_10012445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4598
3300031782|Ga0318552_10338089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766
3300031792|Ga0318529_10207235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910
3300031794|Ga0318503_10287640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533
3300031796|Ga0318576_10087429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1409
3300031798|Ga0318523_10581052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552
3300031799|Ga0318565_10038312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2191
3300031823|Ga0307478_11344302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593
3300031860|Ga0318495_10489124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300031890|Ga0306925_11081231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812
3300031912|Ga0306921_12117178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596
3300031941|Ga0310912_11439877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520
3300031947|Ga0310909_11535567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529
3300031959|Ga0318530_10252969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726
3300031962|Ga0307479_11310823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685
3300032008|Ga0318562_10867097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516
3300032010|Ga0318569_10083974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1422
3300032039|Ga0318559_10219581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876
3300032094|Ga0318540_10646868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509
3300032805|Ga0335078_11609562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718
3300032896|Ga0335075_10546643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166
3300034124|Ga0370483_0168291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740
3300034163|Ga0370515_0244576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761
3300034817|Ga0373948_0056906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.19%
Host-Associated	Host-Associated	7.81%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.69%
Aquatic	Environmental → Aquatic	12.50%
Plants	Host-Associated → Plants	7.81%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Freshwater	Environmental → Aquatic → Freshwater	10.16%
Peat	Environmental → Terrestrial → Peat	4.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.12%
Sediment	Environmental → Aquatic → Sediment	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.72%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.56%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300030007	I_Palsa_E1 coassembly	Environmental
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24740J21852_101003702	3300001979	Corn Rhizosphere	QHLTTAKGSSNGSAQYAVTVTGSGTSWQVSDIELSSVGQS*
JGIcombinedJ26739_1011915072	3300002245	Forest Soil	RAFGTSSLTFVATGTQHLTTSKSTSNGSAQYAITVTGSGTSWQVDNIELSSVGQS*
JGI26339J46600_100334751	3300003218	Bog Forest Soil	QHLVTSQGTSNASTQYAITVTGSGTSWQVNDIELSNVGQS*
Ga0066680_105966731	3300005174	Soil	GASSMTFLATGTQHLVTPKGSSSASAQYAITVTGSGTSWQVNDIELSSVGQS*
Ga0070670_1011207732	3300005331	Switchgrass Rhizosphere	TGTQHLTTAKGSSNGSAQYAVTVTGSGTSWQVSDIELSSVGQS*
Ga0066388_1013478941	3300005332	Tropical Forest Soil	FGPSSLTFIATGTQHLVTSQGASNGSTQYAVTVTGSGTSWQVSDIELSSVGQS*
Ga0066687_102291781	3300005454	Soil	SSLTFVATGTQHLTTTKGASNGSAQYAITVTGSGTSWQVDNIELASVGQS*
Ga0070707_1021139232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TGTQHLTTSKSTSSGSTQYAITVTGSGTSWQVNDIELSSVGQS*
Ga0070730_108807541	3300005537	Surface Soil	FIVTGTQHLVTPKGTSHGSAQYAITVTASGASWLVNDIQLSTVGQS*
Ga0066695_105462472	3300005553	Soil	ATGTQHLATAKGTSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS*
Ga0066661_106646792	3300005554	Soil	TQHLTTSKGTSNGSAQYAITVTGSGSSWQVDNIELSSVGQS*
Ga0066699_109733662	3300005561	Soil	AFGPSSLTFVATGTQHLTTTKGASNGSAQYAITVTGSGTSWQVDNIELASVGQS*
Ga0066705_100825371	3300005569	Soil	INSIRAFGASSLTFVATGTQHLTTSKGTSNGSAQYAITVTGSGSSWQVDNIELSSVGQS*
Ga0066708_105676672	3300005576	Soil	ATAKGSSSGSAQYAVTVTGSGTSWQVSDIELSSAGQS*
Ga0070762_105098031	3300005602	Soil	DGTSNASTQYAVTVTGSGSSWQVSDIELQSAGNA*
Ga0068861_1018444412	3300005719	Switchgrass Rhizosphere	SSLTFIATGTQHLATAKGTSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS*
Ga0070766_110531271	3300005921	Soil	ATSDGTSTASTQYAVTVTGSGSSWQVSDIELQSAGNT*
Ga0080026_100190523	3300005952	Permafrost Soil	SLTFIVTAGQHLVSSRGTSNGSTQYAITVTGSGSSWQVSDIELQSAGNF*
Ga0070717_117590011	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SMTFVVTAGQRLATSSGTSNASAQYAVTVTGSGSSWQVSDIELESAGNS*
Ga0070717_121218292	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TFVVTSNQHLVTAKGTSNGTAQYAITVTGSGTSWQVDNIQLSSTGQF*
Ga0075018_107793451	3300006172	Watersheds	SHGTTNGSAQYAITVTGSGTSWQVNDIELSTAGQS*
Ga0075014_1008356032	3300006174	Watersheds	SNGTSNASTQYAVTVTGSGRSWQVSDIELQSAGNE*
Ga0066665_113551281	3300006796	Soil	SSLTFVATGTQHLTTSKGTSNGSAQYAITVTGSGSSWQVDNIELSSVGQS*
Ga0073928_103390921	3300006893	Iron-Sulfur Acid Spring	TFIVNTGQRLVSSRGTTQGSAQYAVTVTGSGSSWQVNDIELANAGNT*
Ga0075435_1003402641	3300007076	Populus Rhizosphere	NQHLVTAKGTSNGTAQYAITVTGSGTSWQVDNIQLSTTGQF*
Ga0099828_117001092	3300009089	Vadose Zone Soil	VTAKGTSNGSAQYAITVTAAGASWQVNDIQLSTVGQS*
Ga0116214_10026527	3300009520	Peatlands Soil	VTAGQRLATADGTSTGSTQYAVTVTGSGGSWQVSDIELESAGNT*
Ga0116215_11316691	3300009672	Peatlands Soil	TAGQRLATANGTSSGSTQYAVTVTGSGGSWQVSDIELESAGNS*
Ga0116219_105135222	3300009824	Peatlands Soil	GASSLTFIVTAGQRLATADGTSTGSTQYAVTVTGSGGSWQVSDIELESAGNT*
Ga0134067_103541841	3300010321	Grasslands Soil	TKGASNGSAQYAITVTGSGTSWQVDNIELASVGQS*
Ga0074044_110081131	3300010343	Bog Forest Soil	MTFIVTAGQRLVTSHGTSNASTQYAVTVTGSGSSWQVSDIELESAGNE*
Ga0126372_113690241	3300010360	Tropical Forest Soil	TGTQHLTTSEGTSSGSSQYAVTLTGSGTSWQVNDIELSSVGQS*
Ga0126372_124344672	3300010360	Tropical Forest Soil	MTFIVTAGQRLATTHGTSSGSTRYAVTVTGSGSSWQVSDIELESAGNQ*
Ga0126383_132323121	3300010398	Tropical Forest Soil	SGRSRASARYAVTVTGTGTSWQVNDIEQSGVGNS*
Ga0126350_110189572	3300010880	Boreal Forest Soil	FVVTAGQRLVSTNGTSRGSNRYAITVTGSGASWQVSDIELSSAGNS*
Ga0126350_122591052	3300010880	Boreal Forest Soil	RLATSNGTSNASTQYAVTVTGSGSSWQVSDIELESAGNT*
Ga0137386_102966911	3300012351	Vadose Zone Soil	VVTGTQHLVTARGTSNGSEQYAITVTGSGGSWQVNDIQLSSVGQS*
Ga0157335_10067561	3300012492	Arabidopsis Rhizosphere	TGTQHLATAKGSSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS*
Ga0182038_117747931	3300016445	Soil	SMTFIVTAGQRLATTHGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNA
Ga0187812_12153011	3300017821	Freshwater Sediment	VTAGQRLATANGTSSGSTQYAVTVTGSGGSWQVSDIELESAGNS
Ga0187818_103660991	3300017823	Freshwater Sediment	HLVTSNGTTNGSAQYAITVTGSGTSWQVNDIELSTVGQS
Ga0187807_13282162	3300017926	Freshwater Sediment	SSLTFIVTAGQRLATANGTSSGSTQYAVTVTGSGGSWQVSDIELESAGNS
Ga0187825_104469752	3300017930	Freshwater Sediment	RAFGGSSLTFIVTAGQRLATADGTSSGSTQYAVTVTGSGASWQVSDIELESAGNS
Ga0187819_104812332	3300017943	Freshwater Sediment	TFIVTAGQRLATANGTSSGSTRYAVTVTGSGSSWQVSDIELESAGNS
Ga0187879_101739801	3300017946	Peatland	LKGTTEGSTQYAVSVTGSGSSWQVDDIELASAGNS
Ga0187817_110537701	3300017955	Freshwater Sediment	LRAFGASSLTFTVTAGQRLATANGTSSGSTRYAVTVTGSGSSWQVSDIELESAGNS
Ga0187779_104103341	3300017959	Tropical Peatland	GQRLVSTSGTASGSTPYAITVTGSGGSWQVSDIELESAGDT
Ga0187778_108634661	3300017961	Tropical Peatland	VTAGQRLATANGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNS
Ga0187776_108725602	3300017966	Tropical Peatland	TFIVTGTQHLTTSKGSSSGTSQYAVTLTGSGTSWQVNDIELSSVGQS
Ga0187781_103493711	3300017972	Tropical Peatland	QLVSSHGTTSGSTQCAITVTGSGGSWQVSDIELESAGNS
Ga0187780_104513831	3300017973	Tropical Peatland	ATASGTSSGSTQYAVTVTGSGTSWQVSDIELESAGNT
Ga0187777_114713332	3300017974	Tropical Peatland	SSLTFIVTGTQHLVTSGGTSSGSAQYAVTVTGSGTSWQADNIELSTVGQS
Ga0187815_101449142	3300018001	Freshwater Sediment	TFIVTAGQRLATANGTSSGSTQYAVTVTGSGASWQVSDIELESAGNA
Ga0187805_104272022	3300018007	Freshwater Sediment	FIVTAGQRLATADGTSSGSTQYAVTVTGSGASWQVSDIELESAGNA
Ga0187810_103350062	3300018012	Freshwater Sediment	ASSLTFIVTAGQRLATANGTSSGSTQYAVTVTGSGGSWQVSDIELESAGNS
Ga0187883_103123611	3300018037	Peatland	TTGQQLVSSRGTTNGSTQYAVTVTGSGSSWQVDDIELASAGNS
Ga0187765_112151701	3300018060	Tropical Peatland	MTFVVTAGQRLVTAKGTSNGSTQYAVTVTGSGASWQVSDIELQSAGNT
Ga0187772_111628642	3300018085	Tropical Peatland	AGQRLATANGTTSASTQYAVTVTGSGSSWQVSDIELESAGNE
Ga0187770_114195932	3300018090	Tropical Peatland	GPSSMTFIVSAGQHLVSSRGATSGSTQYAVTVTGTGGTWQVSDIELESAGNS
Ga0193729_12321352	3300019887	Soil	SSLTFVATGTQHLTTSKGTSSGSAQYAITVTGSGTSWQVDNIELASVGQS
Ga0193728_13419371	3300019890	Soil	HLTTSKGTSSGSAQYAITVTGSGTSWQVDNIELASVGQS
Ga0210405_110434381	3300021171	Soil	NSIRAFGSSSLTFVVTGTQHLATSKRTSSGSTQYAITVTGSGTSWQVNDIELSSVGQS
Ga0210393_102860641	3300021401	Soil	HLVTSHGTSNGSTQYAVTVTASGNSWQVNDIELSTVGQS
Ga0210397_113068782	3300021403	Soil	AGQRLATSDGTSTASTQYAVTVTGSGGSWQVSDIELESAGNR
Ga0210389_102092451	3300021404	Soil	QRLTSSRGSSSSSTQFAVTLTGSGDTWQVSDVEYASAGNT
Ga0210387_108305892	3300021405	Soil	QRLATSDGTSTASTQYAVTVTGSGSSWQVSDIELQSAGNE
Ga0210386_102801382	3300021406	Soil	DSVTFVVNTTQKLVSSKGTTHGSTQYAVTVTGSGSSWQVDDIELASAGNT
Ga0210394_114017371	3300021420	Soil	AVINSIRAFGTSSLTFVATGTQHLTTSKSTSSGSAQYAITVTGSGSSWQVDNIELSSVGQ
Ga0210394_116092271	3300021420	Soil	TAGQRLATSDGTSTASTLYAVTVTGSGSSWQVSDIELESAGNS
Ga0210402_118563562	3300021478	Soil	FGTSSLTFVATGTQHLTTSKSTSSGSAQYAITVTGSGTSWQVDNIELSSVGQS
Ga0210410_108084912	3300021479	Soil	VTAGQRLATSDGTSTASTLYAVTVTGSGSSWQVSDIELESAGNS
Ga0213851_13910372	3300021860	Watersheds	SFGPSSLTFVVTAGQRLVTSNGTTNGSAQYAITVTGSGSSWQVNNIELSTVGQS
Ga0247695_10151111	3300024179	Soil	QHLTTAKGSSNGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0247661_11135582	3300024254	Soil	AKGSSNGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0208589_10228433	3300025634	Arctic Peat Soil	VSSRGTTHGSPQYAVTVTGSGTTWQVDNIELSSTGNS
Ga0207685_103522672	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TGTQHLVTSKGTSNGSTQYAVTVTGSGTSWQVNDIELSSVGQS
Ga0207695_109390322	3300025913	Corn Rhizosphere	QHLTTAKGSSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0207663_101568393	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FIVTGTQHLVTSKGTSNGSTQYAVTVTGSGTSWQVNDIELSSVGQS
Ga0207700_104733332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VINSIRAFGASSLTFVATGTQHLTTSKGTSNGSAQYAITVTGSGSSWQVDNIELSSVGQS
Ga0207702_107397291	3300026078	Corn Rhizosphere	LTFVVSGNQHLVTAKGTSNGTAQYAITVTGSGTSWQVDNIQLSTTGQF
Ga0207648_118350692	3300026089	Miscanthus Rhizosphere	LATAKGTSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0209056_105355851	3300026538	Soil	HLTTTKGTSNGSAQYAITVTGSGSSWQVDNIELSSVGQS
Ga0207949_10084092	3300026999	Forest Soil	IVTAGQRLVGAHGTTSGSTQYAVTVTGTGGAWQVNDIELESAGNT
Ga0209418_10167612	3300027371	Forest Soil	LTFVATGTQHLTTSKGSSSGSSQYAVTLTGSGTSWQVNDIELSSVGQS
Ga0208042_100019922	3300027568	Peatlands Soil	SSLTFVVTAGQHLVTSQGTTNGSAQYAITVTGSGTSWQVNDIELSTVGQS
Ga0209112_101262482	3300027817	Forest Soil	FIATGTQHLATAKGSSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0209062_11808522	3300027965	Surface Soil	RLVSSRGTTTGTTQYAVTVTGSGGGWRVNDIELASAGNT
Ga0268264_108115452	3300028381	Switchgrass Rhizosphere	LTTAKGSSSGSAQYAVTVTGSGTSWQVSDIELSSVGQS
Ga0302224_104167761	3300028759	Palsa	VTTGQRLVSSKGTTTGNTQYAVTVTGSGSSWQVDDIELASAGNS
Ga0222749_106771122	3300029636	Soil	LTFVATGTQHLTTSKGTSNGSAQYAITVTGSGTSWQVDNIELSSVGQS
Ga0311338_105565531	3300030007	Palsa	SRGTTNGSTQYAVTVTGSGSNWQVDDIELASAGNS
Ga0302305_11618822	3300030046	Palsa	SSKGTTNGSTQYAVTVTGSGTSWQVDDIELASAGNS
Ga0310039_101981512	3300030706	Peatlands Soil	FGASSLTFIVTAGQRLATADGTSTGSTQYAVTVTGSGGSWQVSDIELESAGNT
Ga0302311_102717341	3300030739	Palsa	VVNTTQKLVSSKGTTHGSTQYAVTVTGSGSSWQVDDIELASAGNT
Ga0265460_123187652	3300030740	Soil	VVNTTQHLVSSHTASNGSAQYAVTLTGSGSSWQVNDIELSSAGNS
Ga0265461_118789682	3300030743	Soil	SSLTFIVTTGQRLVSSNGTTNGSTQYAVTVTGSGTSWQVDDIELASAGNS
Ga0302314_119368502	3300030906	Palsa	SLTFIVTTGQRLVSSRGTTNGSTQYAVTVTGSGSNWQVDDIELASAGNS
Ga0302324_1025897891	3300031236	Palsa	NGTQRLVSSKGTTNGTNSYAVTVSGSGASWQVSDIELASAGNS
Ga0318516_101246712	3300031543	Soil	SSMTFIVTAGQRLATTKGTSSGRTRYAVTLTGPGGSWQVSDIELESAGNS
Ga0318572_104489791	3300031681	Soil	TFIVTGTQHLTTSKGSSSGSSQYAVTLTGSGTSWQVNDIELSSVGQS
Ga0310686_1145713181	3300031708	Soil	TSLTFIVTATQHLVSSHGTTNASTQYAITVTGSGTSWQVSDIELSTVGQS
Ga0307474_106365181	3300031718	Hardwood Forest Soil	QHLTTTKGTSNGSAQYAITVTGSGTSWQVDNIELSSVGQS
Ga0318492_103942622	3300031748	Soil	HLTTSKGSSSGSSQYAVTLTGSGTSWQVNDIELSSVGQS
Ga0318535_103108101	3300031764	Soil	ANGTSSGSTQYAVTVTGSGSSWQVSDIELKSAGNS
Ga0318546_100124451	3300031771	Soil	NARSELITAGQRLATTKGTSSGSTRYAVTLTGSGGSWQVSDIELESAGNS
Ga0318552_103380891	3300031782	Soil	GQHLVSSRGTTSGSTQYAVTVTGTGGSWQVSDIELESAGNS
Ga0318529_102072352	3300031792	Soil	IVTAGQRLATAHGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNT
Ga0318503_102876401	3300031794	Soil	TAGQRLATTNGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNT
Ga0318576_100874291	3300031796	Soil	SSMTFIVTAGQRLATTKGTSSGSTRYAVTLTGSGGSWQVSDIELESAGNS
Ga0318523_105810521	3300031798	Soil	RQRLATPNGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNT
Ga0318565_100383123	3300031799	Soil	GQRLATTKGTSSGRTRYAVTLTGPGGSWQVSDIELESAGNS
Ga0307478_113443022	3300031823	Hardwood Forest Soil	IVTAGQRLATSDGTSNASTQYAVTVTGSGGSWQVSDIELESAGNS
Ga0318495_104891242	3300031860	Soil	TKGTSSGSTRYAVTLTGSGGSWQVTDIELESAGNS
Ga0306925_110812312	3300031890	Soil	SKGASHGSAQYAVTVTGSGTSWQVNDIELATAGQS
Ga0306921_121171781	3300031912	Soil	FGPSSLTFIVTGRQHLVTSGGTSSGSAQYAVTVTGSGTSWQADNIELSTVGQS
Ga0310912_114398771	3300031941	Soil	TKGTSSGRTRYAVTLTGPGGSWQVSDIELESAGNS
Ga0310909_115355672	3300031947	Soil	SLTFVVTGTQHLVTSGGTSNGSAQYAVTVTGSGTSWQADNIELSTVGQS
Ga0318530_102529692	3300031959	Soil	HLTTSKGASSGSTQYAVTLTGSGTSWQVNDIELSSAGQS
Ga0307479_113108232	3300031962	Hardwood Forest Soil	MTFIITAGQRLVSAKGTTSGSTRYAITVTGSGTSWQVSDIELESAGNT
Ga0318562_108670972	3300032008	Soil	SSLTFVVTGTQHLVTSGGTSNGSAQYAVTVTGSGTSWQADNIELSTVGQS
Ga0318569_100839741	3300032010	Soil	FGPSSMTFIVTAGQHLVSSRGTISGSTQYAVTVTGTGGSWQVSDIELESAGNS
Ga0318559_102195811	3300032039	Soil	SMTFIVTAGQRLATANGTSSGSTQYAVTVTGSGSSWQVSDIELESAGNT
Ga0318540_106468682	3300032094	Soil	SHGASNGSTQYAVTLTGSGSSWQVSDIELSSAGNS
Ga0335078_116095622	3300032805	Soil	SSLTFIVTGTQHLTTSKGASSGSTQYAVTLTGSGTSWQVNDIELSSVGQS
Ga0335075_105466431	3300032896	Soil	SSMTFIVTAGQRLATANGTTSGSTQYAVTVTGSGSSWQVSDIELGSAGNS
Ga0370483_0168291_631_738	3300034124	Untreated Peat Soil	SKGTTTGSTQYAVTVTGSGSSWQVDDIELASAGNS
Ga0370515_0244576_647_760	3300034163	Untreated Peat Soil	VSSKGTTTGSTQYAVTVTGSGSSWQVDDIELASAGNS
Ga0373948_0056906_2_139	3300034817	Rhizosphere Soil	IATGTQHLTTAKGSSNGSAQYAVTVTGSGTSWQVSDIELSSVGQS