Metagenome / Metatranscriptome Family F065061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	110 residues
Representative Sequence	VKPNTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAVGVLTRNSVIRTRRA
Number of Associated Samples	102
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.69 %
% of genes near scaffold ends (potentially truncated)	32.03 %
% of genes from short scaffolds (< 2000 bps)	85.16 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (40.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.781 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 70.92% β-sheet: 0.00% Coil/Unstructured: 29.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF11746	DUF3303	6.25
PF00196	GerE	6.25
PF08241	Methyltransf_11	4.69
PF00144	Beta-lactamase	2.34
PF00296	Bac_luciferase	2.34
PF12697	Abhydrolase_6	2.34
PF00561	Abhydrolase_1	2.34
PF13191	AAA_16	1.56
PF12802	MarR_2	1.56
PF13456	RVT_3	1.56
PF02518	HATPase_c	1.56
PF03600	CitMHS	0.78
PF07077	DUF1345	0.78
PF03704	BTAD	0.78
PF13520	AA_permease_2	0.78
PF00462	Glutaredoxin	0.78
PF12704	MacB_PCD	0.78
PF07730	HisKA_3	0.78
PF00009	GTP_EFTU	0.78
PF13669	Glyoxalase_4	0.78
PF00171	Aldedh	0.78
PF06772	LtrA	0.78
PF05988	DUF899	0.78
PF01497	Peripla_BP_2	0.78
PF06724	DUF1206	0.78
PF02040	ArsB	0.78
PF07992	Pyr_redox_2	0.78
PF01243	Putative_PNPOx	0.78
PF01738	DLH	0.78
PF00903	Glyoxalase	0.78
PF00353	HemolysinCabind	0.78
PF00891	Methyltransf_2	0.78
PF07729	FCD	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.34
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.34
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.34
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.34
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.78
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.78
COG4291	Uncharacterized membrane protein	Function unknown [S]	0.78
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.78
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.78
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.78
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.78
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.78
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.78
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.91 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.41 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.38 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.91 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.56 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.38 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.56 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.78 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.78 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.78 %
Scytonemataceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.38 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.91 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	1.56 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.78 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.78 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.78 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.38 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	3.12 %
unclassified Dactylosporangium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → unclassified Dactylosporangium	1.56 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.78 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.78 %
Actinopolymorpha cephalotaxi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha cephalotaxi	0.78 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.38 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	3.12 %
Dactylosporangium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → unclassified Dactylosporangium → Dactylosporangium sp.	1.56 %
Arthrobacter sp. AK-YN10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. AK-YN10	0.78 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.78 %
Actinopolymorpha cephalotaxi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha cephalotaxi	0.78 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02JJAA7	Not Available	505	Open in IMG/M
3300000956\|JGI10216J12902_105541040	Not Available	1513	Open in IMG/M
3300002568\|C688J35102_119834550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300004153\|Ga0063455_100265522	Not Available	912	Open in IMG/M
3300004479\|Ga0062595_101495060	Not Available	622	Open in IMG/M
3300005093\|Ga0062594_100404372	Not Available	1105	Open in IMG/M
3300005171\|Ga0066677_10277575	Not Available	956	Open in IMG/M
3300005172\|Ga0066683_10481303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → unclassified Dactylosporangium → Dactylosporangium sp.	759	Open in IMG/M
3300005177\|Ga0066690_10100349	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300005178\|Ga0066688_10101600	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1758	Open in IMG/M
3300005179\|Ga0066684_10330602	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005184\|Ga0066671_10022329	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300005186\|Ga0066676_10576249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	763	Open in IMG/M
3300005327\|Ga0070658_11660029	Not Available	553	Open in IMG/M
3300005434\|Ga0070709_10027628	All Organisms → cellular organisms → Bacteria	3375	Open in IMG/M
3300005434\|Ga0070709_10662204	Not Available	809	Open in IMG/M
3300005435\|Ga0070714_100703174	Not Available	975	Open in IMG/M
3300005436\|Ga0070713_100279441	Not Available	1531	Open in IMG/M
3300005437\|Ga0070710_10022866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3277	Open in IMG/M
3300005439\|Ga0070711_100177704	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300005439\|Ga0070711_100712892	Not Available	845	Open in IMG/M
3300005445\|Ga0070708_100009413	All Organisms → cellular organisms → Bacteria	7877	Open in IMG/M
3300005451\|Ga0066681_10208571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300005546\|Ga0070696_100921918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300005549\|Ga0070704_101640696	Not Available	593	Open in IMG/M
3300005554\|Ga0066661_10669931	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005559\|Ga0066700_10336281	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300005559\|Ga0066700_10844236	Not Available	613	Open in IMG/M
3300005574\|Ga0066694_10452040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	601	Open in IMG/M
3300005576\|Ga0066708_10540645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300005587\|Ga0066654_10665654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005598\|Ga0066706_10466628	Not Available	1006	Open in IMG/M
3300005598\|Ga0066706_10767417	Not Available	763	Open in IMG/M
3300005598\|Ga0066706_11267723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. AK-YN10	558	Open in IMG/M
3300005614\|Ga0068856_101343843	Not Available	729	Open in IMG/M
3300006032\|Ga0066696_10072367	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300006032\|Ga0066696_10834228	Not Available	588	Open in IMG/M
3300006034\|Ga0066656_10118719	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300006034\|Ga0066656_10181841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1330	Open in IMG/M
3300006034\|Ga0066656_10641716	Not Available	685	Open in IMG/M
3300006038\|Ga0075365_10224370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300006046\|Ga0066652_100831341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300006173\|Ga0070716_100048092	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300006173\|Ga0070716_100359370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300006175\|Ga0070712_100470225	Not Available	1050	Open in IMG/M
3300006175\|Ga0070712_101429483	Not Available	604	Open in IMG/M
3300006573\|Ga0074055_11833665	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006755\|Ga0079222_12518646	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006796\|Ga0066665_11484041	Not Available	528	Open in IMG/M
3300006800\|Ga0066660_10556353	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006854\|Ga0075425_100523189	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300007076\|Ga0075435_101899347	Not Available	523	Open in IMG/M
3300009012\|Ga0066710_102073411	Not Available	838	Open in IMG/M
3300009137\|Ga0066709_100065162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4236	Open in IMG/M
3300009137\|Ga0066709_100542635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1646	Open in IMG/M
3300009137\|Ga0066709_100995080	Not Available	1227	Open in IMG/M
3300009143\|Ga0099792_11107449	Not Available	534	Open in IMG/M
3300009147\|Ga0114129_10375588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1878	Open in IMG/M
3300010159\|Ga0099796_10154417	All Organisms → cellular organisms → Bacteria → Terrabacteria group	906	Open in IMG/M
3300010321\|Ga0134067_10294145	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010322\|Ga0134084_10066205	Not Available	1095	Open in IMG/M
3300010337\|Ga0134062_10074933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1418	Open in IMG/M
3300010371\|Ga0134125_12620972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300012200\|Ga0137382_10096026	Not Available	1948	Open in IMG/M
3300012201\|Ga0137365_10020844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5094	Open in IMG/M
3300012201\|Ga0137365_10903668	Not Available	644	Open in IMG/M
3300012204\|Ga0137374_10057325	All Organisms → cellular organisms → Bacteria	3946	Open in IMG/M
3300012206\|Ga0137380_10745358	Not Available	848	Open in IMG/M
3300012208\|Ga0137376_10183046	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300012208\|Ga0137376_10780126	Not Available	823	Open in IMG/M
3300012209\|Ga0137379_11257598	Not Available	647	Open in IMG/M
3300012210\|Ga0137378_10500675	Not Available	1122	Open in IMG/M
3300012210\|Ga0137378_11259847	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012211\|Ga0137377_10132245	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300012211\|Ga0137377_10592502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300012211\|Ga0137377_11260144	Not Available	669	Open in IMG/M
3300012212\|Ga0150985_118219701	Not Available	577	Open in IMG/M
3300012351\|Ga0137386_10951209	Not Available	613	Open in IMG/M
3300012353\|Ga0137367_10157471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1655	Open in IMG/M
3300012354\|Ga0137366_10412668	Not Available	982	Open in IMG/M
3300012356\|Ga0137371_10032484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4027	Open in IMG/M
3300012356\|Ga0137371_10170583	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300012356\|Ga0137371_10285328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha cephalotaxi	1287	Open in IMG/M
3300012362\|Ga0137361_11327159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300012582\|Ga0137358_10658192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300012960\|Ga0164301_11815242	Not Available	513	Open in IMG/M
3300012977\|Ga0134087_10534401	Not Available	596	Open in IMG/M
3300013307\|Ga0157372_11014011	Not Available	961	Open in IMG/M
3300013307\|Ga0157372_11800564	All Organisms → cellular organisms → Bacteria → Terrabacteria group	704	Open in IMG/M
3300014157\|Ga0134078_10353468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	647	Open in IMG/M
3300015357\|Ga0134072_10262749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → unclassified Dactylosporangium → Dactylosporangium sp.	627	Open in IMG/M
3300015371\|Ga0132258_10137478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5840	Open in IMG/M
3300015371\|Ga0132258_11065584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2043	Open in IMG/M
3300015373\|Ga0132257_100526278	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300017654\|Ga0134069_1070428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300018431\|Ga0066655_10442897	Not Available	857	Open in IMG/M
3300018433\|Ga0066667_10894783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	763	Open in IMG/M
3300018482\|Ga0066669_10177638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300018482\|Ga0066669_10454380	Not Available	1100	Open in IMG/M
3300018482\|Ga0066669_10948252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300024182\|Ga0247669_1045001	Not Available	736	Open in IMG/M
3300024186\|Ga0247688_1055750	Not Available	641	Open in IMG/M
3300024245\|Ga0247677_1007580	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300024249\|Ga0247676_1014359	Not Available	1229	Open in IMG/M
3300025906\|Ga0207699_10042724	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300025910\|Ga0207684_11307702	Not Available	597	Open in IMG/M
3300025915\|Ga0207693_11156977	Not Available	585	Open in IMG/M
3300025916\|Ga0207663_10058866	Not Available	2427	Open in IMG/M
3300025922\|Ga0207646_10357841	Not Available	1319	Open in IMG/M
3300025929\|Ga0207664_11821801	Not Available	531	Open in IMG/M
3300025939\|Ga0207665_10483143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300025939\|Ga0207665_10871044	Not Available	714	Open in IMG/M
3300026078\|Ga0207702_10641061	Not Available	1044	Open in IMG/M
3300026335\|Ga0209804_1256213	Not Available	643	Open in IMG/M
3300026530\|Ga0209807_1133413	Not Available	982	Open in IMG/M
3300026538\|Ga0209056_10335864	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300026547\|Ga0209156_10383764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300026548\|Ga0209161_10479656	Not Available	549	Open in IMG/M
3300026550\|Ga0209474_10006120	All Organisms → cellular organisms → Bacteria	10168	Open in IMG/M
3300026550\|Ga0209474_10182373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	1349	Open in IMG/M
3300026552\|Ga0209577_10032173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4557	Open in IMG/M
3300026552\|Ga0209577_10755906	Not Available	545	Open in IMG/M
3300027903\|Ga0209488_11093532	Not Available	545	Open in IMG/M
3300028802\|Ga0307503_10019929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300031226\|Ga0307497_10763692	Not Available	504	Open in IMG/M
3300031366\|Ga0307506_10407848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300031938\|Ga0308175_100057315	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300031939\|Ga0308174_10588241	All Organisms → cellular organisms → Bacteria → Terrabacteria group	920	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.84%
Host-Associated	Host-Associated	10.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.84%
Plants	Host-Associated → Plants	10.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.31%
Loam	Environmental → Terrestrial → Soil → Loam	19.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_09412770	2189573000	Grass Soil	VKPTTRITLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVAAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCTAAGVLMRNNVMRARATT
JGI10216J12902_1055410402	3300000956	Soil	VKPGTRISLAAAGLVYTLFAAGCFRLAVDHGWERGVSIGEGAFVLLGAVAFFVAAARSRWWAAAVVLGTLPLVGWFVATPWNSGRPFLVASLIAPCIAAAALIRNSVVRTGRA*
C688J35102_1198345502	3300002568	Soil	RRMKPKTRIPLAAAGLVYALFAAGCFRLALEHGYERHVSIGEGSFVLLGAAGFFIAASRVRRPAAAVIVGTLPLVGWFLATPSNSGPPFLIASLIAPCLALGVLARDGVMTRRP*
Ga0063455_1002655222	3300004153	Soil	VKPKTRMTLAAGGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGATAFFIAAALSGWQASAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCVAAGVLLRNGIMRARRA*
Ga0062595_1014950602	3300004479	Soil	VRRRTQTTLAAAGFVYALFAAGCFRLAVEHGYERAVSAGEGFFVLLGAAGFLVAASRSRWQAAAVIFGTLPLVGWFLATPWNSGPPFLVASLVAPCIAVAALARNSFVR
Ga0062594_1004043723	3300005093	Soil	PGKLSSSSASEARLVQRRTRIQLAAAGFVYALFAAGCFRLAVEHGYERSVSVGEGLFVLLGAVGFFIAASASRWQAVAVALGTLPLVGWFVATPWNSGPPFLVASLVAPCIACAVLARHRFLRGRVA*
Ga0066677_102775752	3300005171	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAACFLARNSVMRTRRA*
Ga0066683_104813031	3300005172	Soil	MKLRTRIPLTAAGLVYALFAAGCFRLAVEHGYERRVSIGEGSFVLLGAAGLFVAASRARRPAAAVILGTLPLVGWFLATPWNSGPPFLIAALVAPCLAVGVLARNSIMTRHP*
Ga0066690_101003493	3300005177	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGFLARNSVMRTRRA*
Ga0066688_101016001	3300005178	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGDERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSRPPFLIASLVAPCLAVGVLARNS
Ga0066684_103306022	3300005179	Soil	VYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP*
Ga0066671_100223294	3300005184	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP*
Ga0066676_105762492	3300005186	Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASGFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGV
Ga0070658_116600291	3300005327	Corn Rhizosphere	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGDQTLL*
Ga0070709_100276283	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL*
Ga0070709_106622042	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTRIPLAAAGFVYALFAVGCFRLAIQHGYERGVSLGEGFFVLLGAAGLFIAASVPRWRPAAVVFGTLPLVGWFVATPWNSGPPFLVASLVAPCIACAALALNSFVRINPS*
Ga0070714_1007031741	3300005435	Agricultural Soil	KPTTRTPIAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFVLLGAAAFFVSASQSRWRAATVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAVGVLIRHRLMRTGQA*
Ga0070713_1002794412	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL*
Ga0070710_100228664	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL*
Ga0070711_1001777043	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QVKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL*
Ga0070711_1007128921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRERIPLLAAGFVYAVFAAACFRLAAEHGYERGVSVGEGSFVLLGAAGFFVAASRSQWQAAAVTLATLPLVGWFVATPWNSGPPFLVASLIAPCVASAVLARNSFLRTKRVSSSLDADSEVVASQRDLRPEE*
Ga0070708_1000094133	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKPKTRIPLAVAGLVYALFAAGCFRLAVERGYERGVSIGEGSFVLLGAAAFFVATSRSRWQAAVVALGTLPVVGWFVATPWNSGPPFLVASLIAPCIAAGVLARNSVIRTRRA*
Ga0066681_102085712	3300005451	Soil	VKAKTRIPLAAAGLVYALFAAGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA*
Ga0070696_1009219182	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VKQKKRLLLAVVGIGYALFGLGCFRLAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALARHGVIRMRRV*
Ga0070704_1016406961	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VQRRTRIQLAAAGFVYALFAAGCFRLAVEHGYERSVSVGEGLFVLLGAVGFFIAASASRWQAVAVALGTLPLVGWFVATPWNSGPPFLVASLVAPCIACAVLARHRFLRGRVA*
Ga0066661_106699313	3300005554	Soil	LAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGFLARNSVMRTRRA*
Ga0066700_103362812	3300005559	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGVLARNSLIRTRRA*
Ga0066700_108442361	3300005559	Soil	VKPRTRIPLAVAGLVYALFAAGCFRLAVEHGYERAVSVGEGSFALLGAAGLFVAASRSSWQAATVVLGTLPLVGWFVATPWNSGPPFLVASLIAPCIASVALARDGFVRTKRV*
Ga0066694_104520402	3300005574	Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASGLFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA*
Ga0066708_105406452	3300005576	Soil	MKPKTRLPLAVAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSRWQAATVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAMALARDSFGRTKRTKRA*
Ga0066654_106656541	3300005587	Soil	VKLRTRIPLTAAGLVYALFAAGCFRLAVEHGYERRVSMGEGSFVLLGAAGLFVAASRVRRPAAAVVLGTVPLVGWFLATPWNSGPPFLIASLIAPCLAVGSLARNSVVTRRP*
Ga0066706_104666282	3300005598	Soil	LVYALFAAGCLRLAVEHGYERGVSIGEGSFGCSGAAAFFVASSRSRSQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCVAAGVLIRNAVVRARRA*
Ga0066706_107674172	3300005598	Soil	VERTTRIPLAAAGFVYALFAAGCFRLAVEHGYERAVSVGEGSFALLGAAGLFVAASRSSWQAATVVLGTLPLVGWFVATPWNSGPPFLVASLIAPCIASVALARDGFVRTKRV*
Ga0066706_112677231	3300005598	Soil	FSAGCFRLAVEHGYERGISIGEGSFVLVGAVAFFVAASRSKWQAAAVAAGTLPLVGWFVATPWNSGAPFLVASLIAPCIAVGILTRNSLMRTRRA*
Ga0068856_1013438431	3300005614	Corn Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAA
Ga0066696_100723672	3300006032	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAPVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP*
Ga0066696_108342282	3300006032	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAAEHGYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAACFLARNSVMRTRRA*
Ga0066656_101187192	3300006034	Soil	LSEMQLLSRLYAREVKPTTRMALCAAGLVYALFAAGCFRLAVEHGYERGISIGEGSFVLVGAAAFFVAASRSKWQAAAVAVGTLPLVGWFVATPWNSGAPFLVASLIAPCIAVGILTRNSLIRTRRT*
Ga0066656_101818413	3300006034	Soil	VNPKTRIPLAAAGLVYALFAAGCFRLAVEHGYERAVSIGEGSFTLLGAAGLFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIASMALARDSFGRTKS
Ga0066656_106417161	3300006034	Soil	MRIPLAAAGLVYALFAVGCFRLAAEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAPAVALGTLPLVGWFLATPWNSGPPFLVVSLIAPCIAAGVLIRNSVMRTRRT*
Ga0075365_102243703	3300006038	Populus Endosphere	VKRRTRLALAAAGLVYALFAAGCFRLAAEHGYERSVSIGEGLFVLLGAVGFLVAASVSRWQDAAVILGTLPLVGWFVATPWNSGPPFLVASLVAPCIACALLARNRLVRTNRL*
Ga0066652_1008313412	3300006046	Soil	VKPKTRIPLAAAGLVYALFAAGCLRLAVEHGYERGVSIGEGSFVLLGAAAFFVAAFRSRWQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCVAAGALIRNAVVRARRA*
Ga0070716_1000480925	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGDQTLL*
Ga0070716_1003593702	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKQKKRLLLAVVGIGYALFGLGCFRLAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCVAVAALARHGVIRMRRV*
Ga0070712_1004702251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKRRTRISLAAASLIYALFAAGCFRLAIQHGWERGVSIGEGSFVLLGAAAFLVASQSRWQASAVALGTLPLVGWFVATPWNSGRPFLVASLIAPCIAASVLIRNSVMRTRRA*
Ga0070712_1014294832	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKPRTRISLAAAGLVYTLFAAGCFRLAVDHGWERGVSIGEGAFVLLGAAAFFVAAARSRWWASAVVLGTLPLVGWFVATPWNSGRPFLVASLIAPCIAAAVLIRSSLARTGWA*
Ga0074055_118336651	3300006573	Soil	VNRGVIATAAAGAVYALFAASCFRLAAIHGYERGISIGEGLFTLLGAAAFLAAVLLPRRRVTIVVIGTLPLVGWFLATPWNSGPPFLVASLIAPVVAATFL
Ga0079222_125186461	3300006755	Agricultural Soil	KPRKRIPLVVAGLVYALFAGGCFRLAVEHGYERGISIGEGSFVLLGAAAFFVAAFRSRRQAFAVALGTLPLVGWFVATPWNSGPPFLIASLIAPCIATGIVVRNSVRRPSRT*
Ga0066665_114840411	3300006796	Soil	MRIPLAAAGLVYALFAVGCFRLAAEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAPAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRPRRA*
Ga0066660_105563532	3300006800	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGLLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP*
Ga0075425_1005231892	3300006854	Populus Rhizosphere	VKQKTRIPLAVAGVVYALFAAGCFRLAVEHGYERAVSVGEGSFVLLGAAGFFVAASRSSWRAAAVVLATLPLVGWFVATPWNSGPPFLVASLIAPCIACVVLARDSFVRAKRV*
Ga0075435_1018993471	3300007076	Populus Rhizosphere	VRRRTRITLAAAGFVYALFAAACFRLAVEHGYERAVSVGEGFFVLLGAAGFLVAASRSRWQAAAVIFGTLPLVGWFLATPWNSGPPFLVASLVAPCIASVALARTSFVRMDRL*
Ga0066710_1020734112	3300009012	Grasslands Soil	VKPKTRIPLAVAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFAATPWNSGPPFLVASLIAPCIAAGVLARNSLIRTRRE
Ga0066709_1000651624	3300009137	Grasslands Soil	VKRTRIPLAAAGSVYALFAAGCFRLAVEHGYERAVSIGEGSFTLLGAAGLFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIASMALARDSFGRTKSA*
Ga0066709_1005426352	3300009137	Grasslands Soil	VKPKTRIPLAVAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFAATPWNSGPPFLVASLIAPCIAAGVLARNSLIRTRRA*
Ga0066709_1009950802	3300009137	Grasslands Soil	MTKTRIPLAAGGLVYALFAAGCFRLAAEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCVAAGFLARNSVMRTGRA*
Ga0099792_111074492	3300009143	Vadose Zone Soil	VKPTTRIPLAAARLVYTLFAAGCFRLAVEHGYERGISIGEGSFVLLGVVALFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPLFLVASLIAPCIAAGVLMRNRVTRGNQALP*
Ga0114129_103755882	3300009147	Populus Rhizosphere	VKQKTRIPLAVAGVVYALFAAGCFRLAVEHGYERAVSVGEGSFVLLGAAGFFVAASRSSWRAAAVVLATLPLVGWFVATPWNSGPPFLVASLIAPCIACVVLARDGFVRTRRV*
Ga0099796_101544172	3300010159	Vadose Zone Soil	VKPTTRIPLAAAGLIYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAVALFVSAFRSKWRASAVALGTLPLVFWFLATPWNSGPPFLVASLIAPCI
Ga0134067_102941452	3300010321	Grasslands Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAP*
Ga0134084_100662052	3300010322	Grasslands Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA*
Ga0134062_100749332	3300010337	Grasslands Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLISPCVAAGFLARNSVMRTRRT*
Ga0134125_126209722	3300010371	Terrestrial Soil	GLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLVRNRVMRTRRA*
Ga0137382_100960261	3300012200	Vadose Zone Soil	LTTSKPTTRIPLAAAGLIYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGVLARDSVIRTRRA*
Ga0137365_100208443	3300012201	Vadose Zone Soil	VKLRTRIPLTAAGLVYALFAAGCFRLAVEHGYERRVSIGEGSFVLLGAAGLFVAASRARRPAAAVILGTLPLVGWFLATPWNSGPPFLIAALVAPCLAVGVLARNSIMTRHP*
Ga0137365_109036682	3300012201	Vadose Zone Soil	VKPKTRIPLAAVGLVYVLFAAGCLRLAVEHSYERGVSIGEGSFVLLGAAAFFVAAFRSRWQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCV
Ga0137374_100573254	3300012204	Vadose Zone Soil	VKPNTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAVGVLTRNSVIRTRRA*
Ga0137380_107453582	3300012206	Vadose Zone Soil	VKPKTRIPLAAAGLVYALFAAGCLRLAVEHGYERGVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA*
Ga0137376_101830461	3300012208	Vadose Zone Soil	VKQRRRVLLAAVGSGYALFGLGCFRLAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALARHGLIRMRRV*
Ga0137376_107801262	3300012208	Vadose Zone Soil	VKPKTRIPLAVAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAMALARDSFGRTKRTKRA*
Ga0137379_112575982	3300012209	Vadose Zone Soil	VKPKTRIPLAAAGLVYALFAAGCLRLAVEHGYERGVSIGEGSFVLLGAAAVFVAAFRSRWQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCVAAGVLIRNTVVRARR
Ga0137378_105006752	3300012210	Vadose Zone Soil	VKPTTRIPLAAAGLVYVLFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVSAFRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLMRNSVMRA*
Ga0137378_112598471	3300012210	Vadose Zone Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGDERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP*
Ga0137377_101322452	3300012211	Vadose Zone Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGDERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTPPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVITKRP*
Ga0137377_105925022	3300012211	Vadose Zone Soil	VLLAAVGSGYALFGLGCFRLAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALARHGLIRMRRV*
Ga0137377_112601442	3300012211	Vadose Zone Soil	LVYALFAAGCFRLAVEHGYERAVSIGEGSFTLLGAAGLFVAAFRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIASMALARDSFGRTKSA*
Ga0150985_1182197011	3300012212	Avena Fatua Rhizosphere	MTLAAGGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGATAFFIAAALSGWQASAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCVAAGVLLRNGIMRARRA*
Ga0137386_109512091	3300012351	Vadose Zone Soil	VKPKTRIPLAAAGLVYALFAAGCLRLAVEHGYERGVSIGEGSFVLLGAAAFFVAAFRSRWQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCVAAGALIRNAVVRARR
Ga0137367_101574713	3300012353	Vadose Zone Soil	VKPNTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAVGV
Ga0137366_104126681	3300012354	Vadose Zone Soil	VKPTTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVSAFRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCLAAGVLMRNSVMRA*
Ga0137371_100324842	3300012356	Vadose Zone Soil	VKPKTRIPVAAAGLVYALFAAGCLRLAVEHGYERGVSIGEGSFVLLGAAAFFVAAFRSRWQASAVAIGTLPLVGWFVATPWNSGPPFLVASLVAPCVAAGALIRNAVVRARRA*
Ga0137371_101705834	3300012356	Vadose Zone Soil	VKRTRIPLAAAGSVYALFAAGCFRLAVEHGYERAVSIGEGSFTLLGAAGLFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIASMALARDSFGR
Ga0137371_102853282	3300012356	Vadose Zone Soil	VKPKTRIPLAVAGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGAASFFVAASRSKWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAMALARDSFGRTKRTKRA*
Ga0137361_113271591	3300012362	Vadose Zone Soil	VLLAAAGTGYALFGLGCFRLAVDHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALA
Ga0137358_106581921	3300012582	Vadose Zone Soil	VKQKRRVLLAAAGTGYALFGLGCFRLAVDPGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALARHGLIRMRRV*
Ga0164301_118152422	3300012960	Soil	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGDQALL*
Ga0134087_105344011	3300012977	Grasslands Soil	MTKTRIPLAAGGLVYALFAAGCFRLAAEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAS
Ga0157372_110140112	3300013307	Corn Rhizosphere	VKPATRVLLAAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAALFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL*
Ga0157372_118005642	3300013307	Corn Rhizosphere	MDPRTRIPLAAAGLVYALFAAGCFRLAAKHGYERGVSIGEGSFVLLGAAAFFFSASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAAVLLRSSVMRTRRA*
Ga0134078_103534682	3300014157	Grasslands Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLAASLIAPCIAAGVLIRNSVMRTRRA*
Ga0134072_102627491	3300015357	Grasslands Soil	VKPKARIPLAVAGLVYALFAAGCFRLAVEHRYERGVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSV
Ga0132258_101374786	3300015371	Arabidopsis Rhizosphere	LVYALFAAGCFRLAVEHGYERSVSVGEGLFVLLGAVALFIAASASRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLVAPCIACAALARNGFVRTNHL*
Ga0132258_110655843	3300015371	Arabidopsis Rhizosphere	VKLRTRITLTATAFVYAVFAVACFRLAIQHGYERAVSMGEGSFALLGAAGLVAATQSTRWAGTVVVGTLPLVVWFLATSWNSGPPFLIASLIAPCIAVTVLLRAGFVH*
Ga0132257_1005262782	3300015373	Arabidopsis Rhizosphere	VKLRTRITLTATAFVYAVFAVACFRLAIQHGYERAVSMGEGSFALLGAAGLVAATQSTRWAGAVVVGTLPLVVWFLATSWNSGPPFLIASLIAPCIAVTVLLRAGFVH*
Ga0134069_10704281	3300017654	Grasslands Soil	VYAVFAISCFRLAVVSDGETGISIGEGLFTLLGAAALFAAALRSRRQALIVALGTLPLVGWFLATPWNSGPPFLIVSLIVPVAAASVLFWRTRAA
Ga0066655_104428972	3300018431	Grasslands Soil	MRIPLAAAGLVYALFAAGCFRLAIEHGDERHVSIGEGSFVLLGAAGFLVAATGARRQAAVVILGTLPLVGWFLATPWNSGPPFLVASLVAPCLAVGVLMRNRVMTKRP
Ga0066667_108947831	3300018433	Grasslands Soil	VKAKTRIPLAAAGLVYALFAVGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA
Ga0066669_101776381	3300018482	Grasslands Soil	LAAAGLVYALFAAGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA
Ga0066669_104543801	3300018482	Grasslands Soil	VKPKTRMTLAAGGLVYALFAAGCFRLAVEHGYERGVSIGEGSFVLLGATAFFIAAALSGWQASAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCVAAGVLLRKGIMRARRA
Ga0066669_109482522	3300018482	Grasslands Soil	VKQRRRVLLAAVGSGYALFGLGCFRLAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCIAAAALARHGLIRMRRV
Ga0247669_10450011	3300024182	Soil	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL
Ga0247688_10557501	3300024186	Soil	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNR
Ga0247677_10075802	3300024245	Soil	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGDQTLL
Ga0247676_10143592	3300024249	Soil	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGDQAL
Ga0207699_100427244	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRG
Ga0207684_113077021	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KTRIPLAVAGLVYALFAAGCFRLAVERGYERGVSIGEGSFVLLGAAAFFVAASRSRWQAAVVALGTLPVVGWFVATPWNSGPPFLVASLIAPCIAAGVLARNSVIRTRRA
Ga0207693_111569772	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKPRTRISLAAAGLVYTLFAAGCFRLAVDHGWERGVSIGEGAFVLLGAAAFFVAAARSRWWASAVVLGTLPLVGWFVATPWNSGRPFLVASLIAPCIAAAVLIRSSLARTGWA
Ga0207663_100588662	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL
Ga0207646_103578412	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLTAAGLVYALFAAGCFRLAAEHGYERGVSIGEGLFVSLGAAAFFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMR
Ga0207664_118218011	3300025929	Agricultural Soil	MRRRVRIPLVAAGFVYAVFAAGCFRLAVEHGYERAVSLGEGSFVLLGAAGFFVAALRSRWQAAAVALATLPLVGWFLATPWNSGPPFLVASLIAPCIAVGVLIRHRLMRTGQA
Ga0207665_104831432	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VKPKKRLLLAVVGIGYALFGLGCFRPAVEHGYERAVSIGEGLFTLVGAAGLFAAASRSSRQAAIVALGTLPLVGWFAATPWNSGPPFLIASLVVPCVAVAALARHGVIRMRRV
Ga0207665_108710442	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSTWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVMRGGQALL
Ga0207702_106410612	3300026078	Corn Rhizosphere	VKPATRVLLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAALFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAACVLMRNRVM
Ga0209804_12562132	3300026335	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAAGFLARNSVMRTRRA
Ga0209807_11334132	3300026530	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP
Ga0209056_103358641	3300026538	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVITKRP
Ga0209156_103837641	3300026547	Soil	VKAKTRIPLAAAGLVYALFAAGCFRLAAEHGYERRVSIGEGSFVLLGASAFFVAASRSKWQASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRNSVMRTRRA
Ga0209161_104796561	3300026548	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTK
Ga0209474_100061204	3300026550	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSLVLLGAAGFLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP
Ga0209474_101823733	3300026550	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAAEHGYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAP
Ga0209577_100321733	3300026552	Soil	MTKTRIPLAAAGLVYALFAAGCFRLAVEHSYERGVSIGEGSFALLGAVAFFVAASRSRWQAAAVALGTLPLVGWFVATPWNSGPPFLVASLIAPCIAACFLARNSVMRTRRA
Ga0209577_107559061	3300026552	Soil	VRPKARIPLAAAGLVYALFAAGCFRLAIEHGYERHVSIGEGSFVLLGAAGLLVAAARARRQAAAVVLGTLPLVGWFLATPWNSGPPFLIASLVAPCLAVGVLARNSVMTKRP
Ga0209488_110935322	3300027903	Vadose Zone Soil	YTLFAAGCFRLAVEHGYERGISIGEGSFVLLGVVALFVSAFRSKWRASAVALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLMRNRVTRGNQALP
Ga0307503_100199294	3300028802	Soil	VKPTTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRAAAVALGTLPLVGWFLATPWNSGPPFLVASLI
Ga0307497_107636921	3300031226	Soil	VKPTTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRAAAVALGTLPLVGWFLATPWNSGPPFLVASLIAPSIAACVLMRNSVVR
Ga0307506_104078482	3300031366	Soil	REVKPTTRIPLAAAGLVYALFAAGCFRLAVEHGYERGVSIGEGLFVLLGAAAFFVSAFRSKWRAAAVALGTLPLVGWFLATPWNSGPPFLVASLIAPSIAACVLMRNSVVRATT
Ga0308175_1000573153	3300031938	Soil	VEPKTRIPLAAAGLVYALFASGCFRLAVEHGYERGVSIGEGSFVLLGAAAFFVAASRSKWQASTVAIGTLPLVGWFVATPWNSGSPFLVASLVAPCVAAGVLIRNAIVCARRA
Ga0308174_105882412	3300031939	Soil	MDPRTRIPLAAAGLVYALFAAGCFRLAAKHGYERGVSIGEGSFVLLGAAAFFFSASRSKWQASAIALGTLPLVGWFLATPWNSGPPFLVASLIAPCIAAGVLIRSSVMRTRRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences