Metagenome / Metatranscriptome Family F065034

Basic Information
Family ID	F065034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	90 residues
Representative Sequence	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Number of Associated Samples	119
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.19 %
% of genes near scaffold ends (potentially truncated)	33.59 %
% of genes from short scaffolds (< 2000 bps)	82.81 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (78.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.156 % of family members)
Environment Ontology (ENVO)	Unclassified (52.344 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.062 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.11% β-sheet: 10.53% Coil/Unstructured: 67.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00881	Nitroreductase	54.69
PF00892	EamA	9.38
PF06445	GyrI-like	2.34
PF00300	His_Phos_1	2.34
PF13847	Methyltransf_31	2.34
PF04542	Sigma70_r2	1.56
PF08281	Sigma70_r4_2	0.78
PF01116	F_bP_aldolase	0.78
PF13738	Pyr_redox_3	0.78
PF01814	Hemerythrin	0.78
PF01408	GFO_IDH_MocA	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.56
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.56
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.56
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.56
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.09 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.31 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	58.59 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	10.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	10.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.56 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	10.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	1.56 %
unclassified Microbacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → unclassified Microbacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	10.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
unclassified Modestobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter	1.56 %
Microbacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → unclassified Microbacteriaceae → Microbacteriaceae bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	10.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Modestobacter sp. DSM 44400	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	1.56 %
Microbacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → unclassified Microbacteriaceae → Microbacteriaceae bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0546982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1236	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13809573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	673	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100741405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2825	Open in IMG/M
3300003659\|JGI25404J52841_10105046	Not Available	593	Open in IMG/M
3300004463\|Ga0063356_104603552	Not Available	593	Open in IMG/M
3300005328\|Ga0070676_10453319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300005329\|Ga0070683_101934393	Not Available	567	Open in IMG/M
3300005337\|Ga0070682_100233404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1316	Open in IMG/M
3300005337\|Ga0070682_100335822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300005337\|Ga0070682_101250877	Not Available	628	Open in IMG/M
3300005341\|Ga0070691_10136477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1247	Open in IMG/M
3300005343\|Ga0070687_100278552	Not Available	1052	Open in IMG/M
3300005345\|Ga0070692_10246151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1068	Open in IMG/M
3300005353\|Ga0070669_100513957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300005355\|Ga0070671_100098355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2454	Open in IMG/M
3300005364\|Ga0070673_102038379	Not Available	545	Open in IMG/M
3300005367\|Ga0070667_100180607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1866	Open in IMG/M
3300005406\|Ga0070703_10299405	Not Available	670	Open in IMG/M
3300005437\|Ga0070710_10059104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2176	Open in IMG/M
3300005440\|Ga0070705_100012380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4335	Open in IMG/M
3300005456\|Ga0070678_100179354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1732	Open in IMG/M
3300005458\|Ga0070681_10473732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1165	Open in IMG/M
3300005539\|Ga0068853_101016084	Not Available	798	Open in IMG/M
3300005543\|Ga0070672_101088727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	710	Open in IMG/M
3300005546\|Ga0070696_100783598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	784	Open in IMG/M
3300005547\|Ga0070693_100026690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3120	Open in IMG/M
3300005614\|Ga0068856_100949320	Not Available	878	Open in IMG/M
3300005617\|Ga0068859_102020272	Not Available	636	Open in IMG/M
3300005718\|Ga0068866_11235512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300005764\|Ga0066903_102474187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300005834\|Ga0068851_10183765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1159	Open in IMG/M
3300005840\|Ga0068870_10189802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1239	Open in IMG/M
3300006173\|Ga0070716_100785962	Not Available	736	Open in IMG/M
3300006237\|Ga0097621_101667282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	607	Open in IMG/M
3300006358\|Ga0068871_100150475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1984	Open in IMG/M
3300006573\|Ga0074055_11745670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	694	Open in IMG/M
3300006574\|Ga0074056_10235939	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006575\|Ga0074053_11451969	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300006578\|Ga0074059_11817654	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300006579\|Ga0074054_11352670	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006604\|Ga0074060_11431486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300006605\|Ga0074057_11340822	Not Available	519	Open in IMG/M
3300006606\|Ga0074062_12155527	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300006806\|Ga0079220_10081900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1623	Open in IMG/M
3300006871\|Ga0075434_100151602	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300006881\|Ga0068865_101910900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	538	Open in IMG/M
3300006954\|Ga0079219_10183894	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300009011\|Ga0105251_10102457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1308	Open in IMG/M
3300009093\|Ga0105240_10143161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2856	Open in IMG/M
3300009098\|Ga0105245_10034806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4468	Open in IMG/M
3300009098\|Ga0105245_12621670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	557	Open in IMG/M
3300009148\|Ga0105243_10285257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300009162\|Ga0075423_10064472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3796	Open in IMG/M
3300009174\|Ga0105241_10441777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1149	Open in IMG/M
3300009176\|Ga0105242_10598897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300009553\|Ga0105249_10001619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19713	Open in IMG/M
3300010154\|Ga0127503_10893392	Not Available	1217	Open in IMG/M
3300010154\|Ga0127503_11123624	Not Available	509	Open in IMG/M
3300010371\|Ga0134125_10102942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3179	Open in IMG/M
3300010371\|Ga0134125_12714304	Not Available	538	Open in IMG/M
3300010373\|Ga0134128_10571728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300010399\|Ga0134127_10029770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4346	Open in IMG/M
3300010401\|Ga0134121_10529270	Not Available	1091	Open in IMG/M
3300010403\|Ga0134123_10305254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1414	Open in IMG/M
3300011119\|Ga0105246_10199462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1555	Open in IMG/M
3300011119\|Ga0105246_10199706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → unclassified Microbacteriaceae → Microbacteriaceae bacterium	1554	Open in IMG/M
3300012908\|Ga0157286_10447990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300012955\|Ga0164298_10499646	Not Available	812	Open in IMG/M
3300012957\|Ga0164303_10670157	Not Available	694	Open in IMG/M
3300012985\|Ga0164308_10644379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300012985\|Ga0164308_10692195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300012986\|Ga0164304_10124221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1583	Open in IMG/M
3300012988\|Ga0164306_10107401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1833	Open in IMG/M
3300012989\|Ga0164305_10375767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1079	Open in IMG/M
3300013100\|Ga0157373_10228638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1313	Open in IMG/M
3300013296\|Ga0157374_10294749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1604	Open in IMG/M
3300013297\|Ga0157378_10563286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300013297\|Ga0157378_11012765	Not Available	865	Open in IMG/M
3300014968\|Ga0157379_10281022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1515	Open in IMG/M
3300015371\|Ga0132258_12713676	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300022756\|Ga0222622_10895210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300025898\|Ga0207692_10115049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1498	Open in IMG/M
3300025899\|Ga0207642_10159155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211	Open in IMG/M
3300025900\|Ga0207710_10051583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1848	Open in IMG/M
3300025901\|Ga0207688_10005356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6965	Open in IMG/M
3300025907\|Ga0207645_10833892	Not Available	627	Open in IMG/M
3300025911\|Ga0207654_10186722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1356	Open in IMG/M
3300025912\|Ga0207707_11236994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	603	Open in IMG/M
3300025914\|Ga0207671_10539704	Not Available	930	Open in IMG/M
3300025916\|Ga0207663_10009744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5085	Open in IMG/M
3300025917\|Ga0207660_10308983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300025918\|Ga0207662_10249498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1164	Open in IMG/M
3300025919\|Ga0207657_10015898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7270	Open in IMG/M
3300025923\|Ga0207681_10244675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300025924\|Ga0207694_10580257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300025929\|Ga0207664_11376347	Not Available	626	Open in IMG/M
3300025931\|Ga0207644_10733715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300025932\|Ga0207690_10529318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300025935\|Ga0207709_10295697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300025938\|Ga0207704_10176741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1538	Open in IMG/M
3300025939\|Ga0207665_10000395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29961	Open in IMG/M
3300025939\|Ga0207665_10680622	Not Available	808	Open in IMG/M
3300026023\|Ga0207677_10701367	Not Available	898	Open in IMG/M
3300026035\|Ga0207703_12164259	Not Available	532	Open in IMG/M
3300026041\|Ga0207639_10158930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1902	Open in IMG/M
3300026067\|Ga0207678_10049641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3626	Open in IMG/M
3300026075\|Ga0207708_10166687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1742	Open in IMG/M
3300026078\|Ga0207702_11406764	Not Available	691	Open in IMG/M
3300026118\|Ga0207675_100002352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18701	Open in IMG/M
3300026121\|Ga0207683_10080156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2895	Open in IMG/M
3300026142\|Ga0207698_10109385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300028379\|Ga0268266_11318902	Not Available	697	Open in IMG/M
3300028380\|Ga0268265_10732183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300028718\|Ga0307307_10033402	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300028720\|Ga0307317_10198842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	676	Open in IMG/M
3300028755\|Ga0307316_10165508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300028791\|Ga0307290_10279431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300031562\|Ga0310886_11163587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	500	Open in IMG/M
3300031716\|Ga0310813_11650152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	600	Open in IMG/M
3300031740\|Ga0307468_100024281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2755	Open in IMG/M
3300031833\|Ga0310917_10799952	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300031854\|Ga0310904_10482761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	828	Open in IMG/M
3300031858\|Ga0310892_10359424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	937	Open in IMG/M
3300032008\|Ga0318562_10020951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3395	Open in IMG/M
3300032012\|Ga0310902_10553702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	758	Open in IMG/M
3300032174\|Ga0307470_10087227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1743	Open in IMG/M
3300032205\|Ga0307472_100727312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300034818\|Ga0373950_0158379	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.34%
Host-Associated	Host-Associated	46.88%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	46.88%
Aquatic	Environmental → Aquatic	2.34%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.19%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Roots	Host-Associated → Plants → Roots	1.56%
Sediment	Environmental → Aquatic → Sediment	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.25%
Loam	Environmental → Terrestrial → Soil → Loam	18.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_05469821	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MSTVRPLAATSAARLDSAWPAVAASADSGYDLPDHLLITGAVLHAFRKDGWTIAEQRTAGWHYLIFRGHQQSAVYKLVGPLFEAAGSRYRGYRIA*
ICChiseqgaiiFebDRAFT_138095731	3300000363	Soil	MSTVRPRPAVSTTVRHAPRQAPVIPADRWHEPPDSLAITAEVLGAFRTHGWTSTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
INPhiseqgaiiFebDRAFT_1007414051	3300000364	Soil	EXXNPMSTVRPRPAVSTTVRHAPRQAPVIPADRWHEPPDXLAITAEVLRAFRTHGWTXTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
JGI25404J52841_101050461	3300003659	Tabebuia Heterophylla Rhizosphere	MSTVTPRPAVSTTMQPVTRQVPVIPADRWHEPPDSLAITAEVLRAFRTHGWTYAEQRSGRWHYLILRGHDQAAAYKLIGPLFDQTGSYYQGYRIA*
Ga0063356_1046035521	3300004463	Arabidopsis Thaliana Rhizosphere	MSTVRPRPAVSTTVRAAPRQPPVIPADRWHEPPDTLAITAEVLRAFRTHGWTYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0070676_104533192	3300005328	Miscanthus Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0070683_1019343931	3300005329	Corn Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDE
Ga0070682_1002334042	3300005337	Corn Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070682_1003358223	3300005337	Corn Rhizosphere	RWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0070682_1012508772	3300005337	Corn Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0070691_101364772	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0070687_1002785522	3300005343	Switchgrass Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070692_102461511	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	APVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070669_1005139572	3300005353	Switchgrass Rhizosphere	MSTARPRPPVSTTVRDVPRNAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0070671_1000983553	3300005355	Switchgrass Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070673_1020383791	3300005364	Switchgrass Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070667_1001806074	3300005367	Switchgrass Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQ
Ga0070703_102994052	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070710_100591044	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVRPRPAVSTTVRHAPRQAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
Ga0070705_1000123803	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070678_1001793542	3300005456	Miscanthus Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0070681_104737322	3300005458	Corn Rhizosphere	MSTVRPRPAVSTTVRDVPRDAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0068853_1010160841	3300005539	Corn Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIG
Ga0070672_1010887272	3300005543	Miscanthus Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLGAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070696_1007835982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070693_1000266905	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0068856_1009493202	3300005614	Corn Rhizosphere	MSTVTPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0068859_1020202722	3300005617	Switchgrass Rhizosphere	MSTARPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0068866_112355122	3300005718	Miscanthus Rhizosphere	TVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0066903_1024741871	3300005764	Tropical Forest Soil	MSTVTPRPVSTTVQHATRQVPVIPADRWHEPPDSLAVTAEVLRAFRTYGWTSAEQRSGDWHYLVLRGHGQSAAYKLIGPLFDEAGSYYQGYRIA*
Ga0068851_101837652	3300005834	Corn Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGHRIA*
Ga0068870_101898023	3300005840	Miscanthus Rhizosphere	YLERGIFERTNAMSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0070716_1007859621	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGG
Ga0097621_1016672822	3300006237	Miscanthus Rhizosphere	DAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0068871_1001504753	3300006358	Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0074055_117456701	3300006573	Soil	RTGIFEGTSTMSTVTPRLATSATVRHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIVEQRSAGWHYLILRGLEQSAVYKLVGPLFDKTGSYYQGYRIA*
Ga0074056_102359391	3300006574	Soil	MSIVRPRPAVSTTVRHAPRHPPVIPADRWHEPPDTLAITAEVLRAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
Ga0074053_114519692	3300006575	Soil	MSIVRPRPAASTTVRHAPRHPPVIPADRWHEPPDTLAITAEVLRAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0074059_118176542	3300006578	Soil	MSTVRPWPAVSTTVRHAPRHPPVIPADRWHEPPHTLAITAEVLRAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0074054_113526702	3300006579	Soil	MSIVRPRPAVSTTVRHAPRHPPVIPADRWHEPPDTLAITAEVLRAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0074060_114314861	3300006604	Soil	AVPADSRHELPDSLPITAADLRAFRQHGWTIVEQRSAGWHYLILRGLEQSAVYKLVGPLFDKTGSYYQGYRIA*
Ga0074057_113408221	3300006605	Soil	MSTVTPRLATSATVRHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIVEQRSAGWHYLILRGLEQSAVYKLVGPLFDKTGSYYQGYRIA*
Ga0074062_121555273	3300006606	Soil	MSTVRPWPAVSTTVRHAPRHPPVIPADRWHEPPDTLAITAEVLRAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0079220_100819003	3300006806	Agricultural Soil	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYRGHRIA*
Ga0075434_1001516022	3300006871	Populus Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0068865_1019109002	3300006881	Miscanthus Rhizosphere	MSTVTPRPAISTTVRDSPRHAPVIPADRWHEPPDSLAITAEVLRAFHTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0079219_101838942	3300006954	Agricultural Soil	MSTVRPWPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0105251_101024571	3300009011	Switchgrass Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRALRTHGWRYTEQRSGRWHYLTLRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105240_101431611	3300009093	Corn Rhizosphere	TVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105245_100348065	3300009098	Miscanthus Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105245_126216701	3300009098	Miscanthus Rhizosphere	IPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0105243_102852571	3300009148	Miscanthus Rhizosphere	GIFERTNAMSTVRPQPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0075423_100644724	3300009162	Populus Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105241_104417772	3300009174	Corn Rhizosphere	VRHAPRQAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105242_105988971	3300009176	Miscanthus Rhizosphere	VRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0105249_100016193	3300009553	Switchgrass Rhizosphere	VRDVPRDAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0127503_108933922	3300010154	Soil	MSTVTPRLATSATVRHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA*
Ga0127503_111236241	3300010154	Soil	MSTVRPRPAVSTTVRHAPRHPPVIPADRWHEPPDTLAITAEVLHAFRTHGWTYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0134125_101029421	3300010371	Terrestrial Soil	GIFERTNAMSTVRPRPAVSTTVRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0134125_127143041	3300010371	Terrestrial Soil	VRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0134128_105717281	3300010373	Terrestrial Soil	MSTARPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0134127_100297707	3300010399	Terrestrial Soil	VRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0134121_105292702	3300010401	Terrestrial Soil	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
Ga0134123_103052542	3300010403	Terrestrial Soil	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0105246_101994621	3300011119	Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDET
Ga0105246_101997063	3300011119	Miscanthus Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0157286_104479901	3300012908	Soil	HAPRQIPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
Ga0164298_104996461	3300012955	Soil	MSTVRPRLAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRLGRWHYLILRGHDQSAAYKLIGPRFDETG
Ga0164303_106701571	3300012957	Soil	VRHAPRQAPVIPADRWHEPPDSLAITADVLRAFRTHGWRYTEQRLGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0164308_106443792	3300012985	Soil	AISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA*
Ga0164308_106921951	3300012985	Soil	TVLDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRLGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA*
Ga0164304_101242212	3300012986	Soil	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0164306_101074013	3300012988	Soil	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPRFDETGGYYQGHRIA*
Ga0164305_103757671	3300012989	Soil	VRDVPRHPPVIPADRWHEPPDSLAFTAEVLRAFRTHGWRYTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0157373_102286381	3300013100	Corn Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGHRIA*
Ga0157374_102947491	3300013296	Miscanthus Rhizosphere	VRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA*
Ga0157378_105632862	3300013297	Miscanthus Rhizosphere	ISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA*
Ga0157378_110127651	3300013297	Miscanthus Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGRDPSAAYTLIGPLCNETGRYSQGHRI
Ga0157379_102810222	3300014968	Switchgrass Rhizosphere	VRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSGRWHYVILRGHDQSAAYKLVGPLFDETGGYYQGYRIA*
Ga0132258_127136762	3300015371	Arabidopsis Rhizosphere	MPHTGHLTVSVPADSQHEPPDHLAFTAAVLRAFRTHGWTIAEQRSDRWHYLILRGHDQSAVYKLIGPQFDDTGGYYQGYRIA*
Ga0222622_108952101	3300022756	Groundwater Sediment	ATMRHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA
Ga0207692_101150493	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVRPRPAVSTTVRHAPRQAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA
Ga0207642_101591552	3300025899	Miscanthus Rhizosphere	MTTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207710_100515834	3300025900	Switchgrass Rhizosphere	TTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207688_100053567	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207645_108338922	3300025907	Miscanthus Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207654_101867222	3300025911	Corn Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207707_112369941	3300025912	Corn Rhizosphere	PVSTTVRDVPRDAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207671_105397042	3300025914	Corn Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207663_100097448	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPL
Ga0207660_103089831	3300025917	Corn Rhizosphere	MSTARPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207662_102494982	3300025918	Switchgrass Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0207657_100158988	3300025919	Corn Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207681_102446752	3300025923	Switchgrass Rhizosphere	MSTARPRPPVSTTVRDVPRNAPVIPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207694_105802571	3300025924	Corn Rhizosphere	IPAHRRHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207664_113763472	3300025929	Agricultural Soil	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGS
Ga0207644_107337152	3300025931	Switchgrass Rhizosphere	TTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0207690_105293182	3300025932	Corn Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0207709_102956971	3300025935	Miscanthus Rhizosphere	MSTVRPQPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207704_101767412	3300025938	Miscanthus Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAINAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207665_1000039522	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207665_106806221	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AVSTTVRHAPRQAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA
Ga0207677_107013671	3300026023	Miscanthus Rhizosphere	MSTARPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDE
Ga0207703_121642591	3300026035	Switchgrass Rhizosphere	MSTVTPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGYRIA
Ga0207639_101589301	3300026041	Corn Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207678_100496413	3300026067	Corn Rhizosphere	MSTVRPRPAVSTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0207708_101666873	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAVTAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGYRIA
Ga0207702_114067641	3300026078	Corn Rhizosphere	MSTVTPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0207675_10000235218	3300026118	Switchgrass Rhizosphere	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207683_100801564	3300026121	Miscanthus Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0207698_101093851	3300026142	Corn Rhizosphere	MSTVRPRPAVSTTVRDVPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0268266_113189022	3300028379	Switchgrass Rhizosphere	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGG
Ga0268265_107321832	3300028380	Switchgrass Rhizosphere	TTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0307307_100334022	3300028718	Soil	MSTVTPRRAISATERHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA
Ga0307317_101988422	3300028720	Soil	AISATVRHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA
Ga0307316_101655081	3300028755	Soil	AHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA
Ga0307290_102794311	3300028791	Soil	VQGIFERTPTMSTVTPRRAISATERHAARPAHAVPADSRHELPDSLPITAADLRAFRQHGWTIAEQRSAGWHYLILRGLEQSAVYKLVGPLFDNTGSHYQGYRIA
Ga0310886_111635872	3300031562	Soil	PVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0310813_116501522	3300031716	Soil	PRQAPVIPADRWHEPPDSLAITAEVLGAFRTHGWTSTEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0307468_1000242811	3300031740	Hardwood Forest Soil	PADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0310917_107999521	3300031833	Soil	MSTVTPRPLSTTVQHATRQVPVIPADRWHEPPDSLAVTAEVLRAFRTYGWTSAEQRSGDWHYLVLRGHGQSAAYKLIGPLFDEAGSYYQGYRIA
Ga0310904_104827612	3300031854	Soil	MSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0310892_103594241	3300031858	Soil	MSTARPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0318562_100209515	3300032008	Soil	MSTVTPRPLSTTVQHATRQIPVIPADRWHEPPDSLAVTAEVLRAFRTYGWTSAEQRSGDWHYLVLRGHGQSAAYKLIGPLFDEAGSYYQ
Ga0310902_105537022	3300032012	Soil	NAMSTVTPRPAISTTVRDAPRHAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYTEQRSDRWHYLILRGHDQSAAYKLIGPLFDETGGYYQGHRIA
Ga0307470_100872274	3300032174	Hardwood Forest Soil	MSTVRPRPPVSTTVRDVPRDAPVIPAHRWHEPPDSLAVTAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA
Ga0307472_1007273121	3300032205	Hardwood Forest Soil	SSKGHNTMSTVRPRPAVSTTVRHAPRQAPVIPADRWHEPPDSLAITAEVLRAFRTHGWTSTEQRSGRWHYVILRGHDQSAAYKLIGPLFDETGSYYQGYRIA
Ga0373950_0158379_55_303	3300034818	Rhizosphere Soil	VRDVPRDAPVIPADRWHEPPDSLAITAEVLRAFRTHGWRYAEQRSGRWHYLILRGHDQSAAYKLIGPLFDETGSYYQGHRIA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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