Metagenome Family F065019

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065019
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	49 residues
Representative Sequence	MAHPPPRALIKFLKPYDREIRDLALQLRALVLEEMAPCYENIYDAYS
Number of Associated Samples	107
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.48 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.531 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (40.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.375 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01177	Asp_Glu_race	23.44
PF00326	Peptidase_S9	9.38
PF13302	Acetyltransf_3	5.47
PF09471	Peptidase_M64	5.47
PF13091	PLDc_2	3.12
PF14015	DUF4231	2.34
PF01790	LGT	1.56
PF03372	Exo_endo_phos	1.56
PF00561	Abhydrolase_1	0.78
PF16217	M64_N	0.78
PF08530	PepX_C	0.78
PF13242	Hydrolase_like	0.78
PF02897	Peptidase_S9_N	0.78
PF14534	DUF4440	0.78
PF07676	PD40	0.78
PF14337	Abi_alpha	0.78
PF04191	PEMT	0.78
PF13466	STAS_2	0.78
PF08818	DUF1801	0.78
PF04229	GrpB	0.78
PF02900	LigB	0.78
PF02652	Lactate_perm	0.78
PF01979	Amidohydro_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.78
COG1620	L-lactate permease	Energy production and conversion [C]	0.78
COG1770	Protease II	Amino acid transport and metabolism [E]	0.78
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.78
COG2936	Predicted acyl esterase	General function prediction only [R]	0.78
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.78
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.09 %
Unclassified	root	N/A	5.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.25 %
Unclassified	root	N/A	5.47 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.69 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.12 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.69 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.12 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.56 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.69 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.12 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.56 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.56 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.69 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	3.12 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.56 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.69 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.12 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.56 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001432\|JGI24034J14986_102596	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300004643\|Ga0062591_102044972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	592	Open in IMG/M
3300004643\|Ga0062591_102574567	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300004808\|Ga0062381_10108289	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005176\|Ga0066679_11038171	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300005177\|Ga0066690_10428859	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300005178\|Ga0066688_10665731	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005187\|Ga0066675_11397192	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005295\|Ga0065707_10208970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1274	Open in IMG/M
3300005336\|Ga0070680_101296231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	630	Open in IMG/M
3300005338\|Ga0068868_101117523	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005354\|Ga0070675_101448600	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005440\|Ga0070705_101202895	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005441\|Ga0070700_100365327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300005445\|Ga0070708_100194185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1899	Open in IMG/M
3300005445\|Ga0070708_100261241	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300005445\|Ga0070708_101484322	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300005451\|Ga0066681_10160522	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005459\|Ga0068867_101660807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	598	Open in IMG/M
3300005471\|Ga0070698_102227795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	501	Open in IMG/M
3300005518\|Ga0070699_100206626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300005526\|Ga0073909_10130708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300005536\|Ga0070697_101862116	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005546\|Ga0070696_100042636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3136	Open in IMG/M
3300005546\|Ga0070696_100874361	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300005549\|Ga0070704_100808043	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005549\|Ga0070704_100867004	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005549\|Ga0070704_100992503	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005549\|Ga0070704_101439510	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005553\|Ga0066695_10904817	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300005560\|Ga0066670_10201378	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005574\|Ga0066694_10280372	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300005617\|Ga0068859_101863470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	664	Open in IMG/M
3300005618\|Ga0068864_101420750	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300005618\|Ga0068864_102430276	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300005719\|Ga0068861_100613185	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005764\|Ga0066903_101551577	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005844\|Ga0068862_101068102	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300006032\|Ga0066696_10734140	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006034\|Ga0066656_10195294	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300006049\|Ga0075417_10238565	Not Available	869	Open in IMG/M
3300006173\|Ga0070716_101523939	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006358\|Ga0068871_101434628	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006796\|Ga0066665_10520306	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300006796\|Ga0066665_10669006	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006797\|Ga0066659_10525260	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300006844\|Ga0075428_100969590	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300006852\|Ga0075433_11951598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300007004\|Ga0079218_13742345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300007258\|Ga0099793_10323514	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300009038\|Ga0099829_11388810	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009038\|Ga0099829_11502411	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300009088\|Ga0099830_11506374	Not Available	560	Open in IMG/M
3300009088\|Ga0099830_11584871	Not Available	546	Open in IMG/M
3300009089\|Ga0099828_10410574	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300009089\|Ga0099828_11800936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009137\|Ga0066709_103049313	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300009147\|Ga0114129_13358701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	516	Open in IMG/M
3300009553\|Ga0105249_10487797	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300010047\|Ga0126382_10700133	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300010301\|Ga0134070_10247016	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300010320\|Ga0134109_10089214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300010358\|Ga0126370_11757268	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010361\|Ga0126378_10168633	All Organisms → cellular organisms → Bacteria → Acidobacteria	2246	Open in IMG/M
3300010400\|Ga0134122_10197089	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300010400\|Ga0134122_12795440	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300010400\|Ga0134122_13026183	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010401\|Ga0134121_10681324	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300010401\|Ga0134121_12484789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	560	Open in IMG/M
3300010403\|Ga0134123_12484323	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300010403\|Ga0134123_12765464	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012198\|Ga0137364_10913505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012200\|Ga0137382_11008032	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012201\|Ga0137365_11185378	Not Available	547	Open in IMG/M
3300012206\|Ga0137380_11344316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012208\|Ga0137376_11089146	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300012209\|Ga0137379_10044426	All Organisms → cellular organisms → Bacteria	4287	Open in IMG/M
3300012210\|Ga0137378_10639523	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	974	Open in IMG/M
3300012210\|Ga0137378_11454119	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012226\|Ga0137447_1071414	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012357\|Ga0137384_11573171	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012358\|Ga0137368_10987115	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300012361\|Ga0137360_11626492	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012469\|Ga0150984_112955747	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300012532\|Ga0137373_10126765	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300012532\|Ga0137373_10464536	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012582\|Ga0137358_10400920	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300012917\|Ga0137395_10712110	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300012922\|Ga0137394_11422954	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300012923\|Ga0137359_10330199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1356	Open in IMG/M
3300012930\|Ga0137407_10865012	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300012948\|Ga0126375_11343753	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012976\|Ga0134076_10251607	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300013297\|Ga0157378_10035759	All Organisms → cellular organisms → Bacteria	4395	Open in IMG/M
3300013306\|Ga0163162_10410927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1486	Open in IMG/M
3300013308\|Ga0157375_11459444	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300014166\|Ga0134079_10630655	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300014325\|Ga0163163_10923774	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300014326\|Ga0157380_13519259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	502	Open in IMG/M
3300015078\|Ga0167660_1037707	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300015245\|Ga0137409_10243619	All Organisms → cellular organisms → Bacteria → Acidobacteria	1600	Open in IMG/M
3300015371\|Ga0132258_10728752	All Organisms → cellular organisms → Bacteria → Acidobacteria	2497	Open in IMG/M
3300015372\|Ga0132256_100740383	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300018061\|Ga0184619_10042753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1951	Open in IMG/M
3300018083\|Ga0184628_10431568	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300020060\|Ga0193717_1124915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300021082\|Ga0210380_10150745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300023014\|Ga0233358_105302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300025910\|Ga0207684_10977760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	709	Open in IMG/M
3300025922\|Ga0207646_10976464	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300025922\|Ga0207646_11070764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	710	Open in IMG/M
3300025931\|Ga0207644_11435491	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300025935\|Ga0207709_11150727	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300025960\|Ga0207651_11006712	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300026095\|Ga0207676_11104000	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300026300\|Ga0209027_1319522	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300026550\|Ga0209474_10428665	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300026551\|Ga0209648_10677881	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300027654\|Ga0209799_1148203	Not Available	534	Open in IMG/M
3300027691\|Ga0209485_1025423	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300027875\|Ga0209283_10572934	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300028792\|Ga0307504_10066817	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032003\|Ga0310897_10616516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300032035\|Ga0310911_10708583	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300032205\|Ga0307472_101291979	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300032205\|Ga0307472_101719328	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.12%
Host-Associated	Host-Associated	21.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.22%
Plants	Host-Associated → Plants	21.88%
Aquatic	Environmental → Aquatic	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.59%
Sediment	Environmental → Aquatic → Sediment	2.34%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Roots	Host-Associated → Plants → Roots	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.81%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001432	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015078	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300023014	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P29	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24034J14986_1025962	3300001432	Corn, Switchgrass And Miscanthus Rhizosphere	VKYPPPRELLKFLKPYDKTTRDLALQLRALLLDEIAPCYENIYDAYSAVAIGYGTSEKL
Ga0062591_1020449722	3300004643	Soil	MSKKPPAELVKFLKPYDRAIQKLALDLRLIVIDELAPCYENIYDAYSAVAIGYGS
Ga0062591_1025745672	3300004643	Soil	MPKFSPPSALIKFLKPYDREVRELALQLRSLLLEEIAPCYENIYDAYSAVAIGYGTS
Ga0062381_101082891	3300004808	Wetland Sediment	MAHRPPPELIKFLKPYDREIRDLALKLRALVLEEMAPCYENIYDAYSAVSIGYGTSDRLR
Ga0066679_110381712	3300005176	Soil	MTHPAPADLIKFLRPYDPQVQELALKLRALVLEEMAPCYENIYDAYSAVAIGYGT
Ga0066690_104288591	3300005177	Soil	MSQSTPAALIKFLKPYDGEIRDLALKLRALVLEEMAPCYENIYDAY
Ga0066688_106657312	3300005178	Soil	LKYPPPTALIKFLKPYDREIQTLALKLRALMLEEMAPCYENI
Ga0066675_113971921	3300005187	Soil	VKYSPPNALIKFLKPYDQEVRDAALKLRALVLEEMAPCFENIYDAYSAVAIGYGTS
Ga0065707_102089701	3300005295	Switchgrass Rhizosphere	LPHYKPPASLIKFLKPYDRAIQKLALDLRALVLEEMAPCHENIYDAYSAV
Ga0070680_1012962311	3300005336	Corn Rhizosphere	MKHKPPAELVEFLKPYDRKIQKLALDLRSIVVTEFGPCYENIYDAYSAVAM
Ga0068868_1011175231	3300005338	Miscanthus Rhizosphere	VKYPPPRELLKFLKPYDKATRDLALQLRALLLDEMAPCYENIYDAYSAVAIGYGTS
Ga0070675_1014486002	3300005354	Miscanthus Rhizosphere	MAYPPPSDLKKFLRVYDPEVQRLALKLRALVLEEMAPCYENIYDA
Ga0070705_1012028952	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRHPAPVALIKFLRPYDRAIQKLALDLRSLVLEEMAPCHENIYDAYSAVAIGYGPTDR
Ga0070700_1003653272	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VWLMMEYPPPADLKKFLRPYDRDVQKLALSLRALVLSEMAPCYENIYDAYSA
Ga0070708_1001941853	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNYPPPAALKKFLKPYDPEIRDLALSLRALVLEEMAPCYENIYDAYSAVAIGY
Ga0070708_1002612413	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIYSPPRELIKFLKPYDREIRDLALNLRALVLAETAPCYENIYDAYSAVAIGYG
Ga0070708_1014843221	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTHPAPADLIKFLRPYDPQVQELALKLRALVLEEMAPCYENIYDAYSAVA
Ga0066681_101605222	3300005451	Soil	LKYPPPTALIKFLKPYDREVRDVALKLRALVLEEMAPCYEN
Ga0068867_1016608071	3300005459	Miscanthus Rhizosphere	VKYPPPRELLKFLKPYDKATRDLALQLRALLLDEMAPCYENIYDAYS
Ga0070698_1022277952	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVRYKPPAALIKFLKPYDREVQKLALDLRALVLEEMAPCHENIYDAYSAVA
Ga0070699_1002066262	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAHPPPRALIKFLKPYDREIRDLALQLRALVLEEMAPCYENIYDAYS
Ga0073909_101307081	3300005526	Surface Soil	MTAYPAPAALKKFLRPYDKDVRELALNLRALVLEEMAPCYENIYDAYSAVAIGYGTSER
Ga0070697_1018621162	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKYPPPTALVKFLKPYDREIQTLALKLRALMLEEMAPCYENIYDAYSA
Ga0070696_1000426363	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MVRYKPPAALIKFLRPYDREVQKLALDLRALVLEEMAPCHENIYDAYSAV
Ga0070696_1008743612	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTHRPPPALIKFLKPYDREIQDLALRLRALVLEEMAPCYE
Ga0070704_1008080431	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSKSSPPSALIKFLKPYDPGVRDLALQLRDLLLEEIAPCYEN
Ga0070704_1008670041	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKHSVPRALIKFLKPYDPEIRDLALKLRALVLEEMEPCYENIYDAYSAVA
Ga0070704_1009925031	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSRYPAPPELIKFLKPYERSVRDLALGLRLLVLEEMAPCYENIYD
Ga0070704_1014395101	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRPPPDLIKFLKPYDRAVQQLALNLRSVVIEEMAPCHENI
Ga0066695_109048171	3300005553	Soil	MAYSVPADLISFLKPYDSGIRQLALRLRVLLLEEMAPCYENIYD
Ga0066670_102013781	3300005560	Soil	MSFPVPRQLTNFLKPYDPEIRNLAVKLRALVLEEMAPCYENIYDAYSAVAIG
Ga0066694_102803722	3300005574	Soil	MAYSVPADLIRFLKPYDSGIRQLALRLRVLLLEEMAPCYENIYDAYSAVAIGYGTSE
Ga0068859_1018634701	3300005617	Switchgrass Rhizosphere	MDMSSYPPPAELIRFLKPYDKAVRELALGLRRLVIEEMAPCYENIYDAYNA
Ga0068864_1014207501	3300005618	Switchgrass Rhizosphere	MDYPPPADLKKFLRPYHREVQQLALGLRALVLAEMAPCYENIYDAYSAVAIGYGTSDRM
Ga0068864_1024302761	3300005618	Switchgrass Rhizosphere	MPNKPPAELIKFLKPYERAIQKLALDLRLIVIDELAPCHENIYDAYSAVAIGYGSSD
Ga0068861_1006131851	3300005719	Switchgrass Rhizosphere	MRRHPAPVALIKFLRPYDRAIQKLALDLRSLVLEEMAPCHENIYDAYSAVAIGYGPTD
Ga0066903_1015515773	3300005764	Tropical Forest Soil	LNPPPAELIKFLKPYDPEIRDLALQLRALVLTEMAPCYENIYD
Ga0068862_1010681021	3300005844	Switchgrass Rhizosphere	MNYPPPAALKKFLKPYDAEIRDLALQLRALVLEEMAPCYENIYDAYSAVA
Ga0066696_107341401	3300006032	Soil	MKYPPPAALKKFLKPYAREVRDLALDLRALVLEEMAPCYENIYDAY
Ga0066656_101952942	3300006034	Soil	MPVYSAPAALIKFLRPYKPEIRELALQLRALVLEEMAPCYENIYDAYSAVAI
Ga0075417_102385652	3300006049	Populus Rhizosphere	VKYPVPSSLRRFLKPYDRTVRTLALQLRELLLDEIGPCYENIY
Ga0070716_1015239392	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKYPPPRALLKFLKPYEKATRDLALQLRALLLEEMAPCYENIYDAYSAVAIGYGTSERLG
Ga0068871_1014346281	3300006358	Miscanthus Rhizosphere	MEYPPPVDLKKFLRPYDREVQKLALNLRALLLEEMAPCYENIYDAYSAVAIGY
Ga0066665_105203061	3300006796	Soil	MSLRPPRALLGFLKPYDRAIRDLALAVRAFVLQDMTPCYE
Ga0066665_106690061	3300006796	Soil	LKYPPPTALIKFLKPYDREIQTLALKLRALMLEEMAPCYENIYDAY
Ga0066659_105252601	3300006797	Soil	LKHQPPTALIKFLKPYDREIQSLALNLRALVLEEMAPCYEN
Ga0075428_1009695901	3300006844	Populus Rhizosphere	MNYPPPAALKKFLKPYDAEIRDLALELRGLVLEEMAPCFENIYDAYSAVAIGYGTSD
Ga0075433_119515982	3300006852	Populus Rhizosphere	VKHPPPRELLKFLKPYDAPVRELALQLRALLLEEMGPCYENIYDAYSAVAIGYG
Ga0079218_137423452	3300007004	Agricultural Soil	MKRHPPPISLIEFLKPYDAAIRDLALSLRSLVLEEMAPCHENIYDAYSAVAI
Ga0099793_103235141	3300007258	Vadose Zone Soil	MKRHSPPPALIKFLKPFDADVRDLALSLRSLVIDEMAPCYENIYDAYSAVAIG
Ga0099829_113888102	3300009038	Vadose Zone Soil	VNHPPPRELIKFLKPYDPEVRDLALQLRALLLEEMAPCYENIYDAYSAVAIGYGTSDRL
Ga0099829_115024112	3300009038	Vadose Zone Soil	LSKQSPPAALIKFLKPYDREIRELALQLRALVLEEMAPCY
Ga0099830_115063742	3300009088	Vadose Zone Soil	MAHSPPPALIKFLKPYNREIRELALKLRALVLEEMAPCYENIYDAYSAVAIG
Ga0099830_115848711	3300009088	Vadose Zone Soil	MPYPPPAALITFLKPYDREIQTLALQLRALVLGEMAPCYENIYDAYSAVAIGYG
Ga0099828_104105741	3300009089	Vadose Zone Soil	MPHTPPAALIKFLKPYDREIRELALKVRALLLEEMAPCYENIYDAYGAVAI
Ga0099828_118009361	3300009089	Vadose Zone Soil	MLTNKKHPPPKALLQLLKPYDRAIRKLALAVRSVVLAEMAPCHENIYDAYNAVSLGYGPTDRLRD
Ga0066709_1030493131	3300009137	Grasslands Soil	MRRYAPPPDLIKFLRPYDRAIKKLALSLRVLVLEEMAPCYENIYDAYSAVAIG
Ga0114129_133587012	3300009147	Populus Rhizosphere	MMPSKPPAELIKFLKPYDRAIQKLCLDLRKIVIAELAPCYENIYD
Ga0105249_104877971	3300009553	Switchgrass Rhizosphere	MKHKPPAELVEFLKPYDRKIQKLALDLRSIVVTEFGPCYENIYDAYSAVAMG
Ga0126382_107001332	3300010047	Tropical Forest Soil	MHPPPAVLKKFLEPFDPEVRDLALKLRCLVLEEMAPCYEN
Ga0134070_102470162	3300010301	Grasslands Soil	VKYSPPNALIKFLKPYDQEVRDAALKLRALVLEEMAPCFENIYDAYSAVAIGYGTSDRLS
Ga0134109_100892142	3300010320	Grasslands Soil	VNFSPPAALIKFLKPYDREVRDLALQLRALLLEEMALCYENI*
Ga0126370_117572682	3300010358	Tropical Forest Soil	MRYPPPAPLIKFLKPYDPAVRDLALQLRQLVLEEMAPCYENIYDAYSAVA
Ga0126378_101686331	3300010361	Tropical Forest Soil	MAHPCPADLKKFLRPYDRDVQQLALGLRALLLEEMAPCYRN
Ga0134122_101970892	3300010400	Terrestrial Soil	MAARYKPPAALIKFLKPYDREVQKLALDLRALVLEEMAPCHENIYDAYSAVAIGYGPTDRVS
Ga0134122_127954402	3300010400	Terrestrial Soil	MPRRYPPPPELVKFLQPYDRAIQKLALGLRALVLEEMAPCHENIYDAYSAVAIGYGP
Ga0134122_130261831	3300010400	Terrestrial Soil	VKYPVPSALRTFLKPYDKSIRDLALQLRDVLLEEMAPCYENIYDAYSAVAIGYGTSERL
Ga0134121_106813242	3300010401	Terrestrial Soil	VKYPPPRALLKFLKPYDKATRDLALQLRALLLEEMAPCYENIYD
Ga0134121_124847892	3300010401	Terrestrial Soil	VKHPPPRELLKFLKPYDKTTRDLALGLRALLLDEIAPCYENIYDAYSAVAIGYGTSE
Ga0134123_124843232	3300010403	Terrestrial Soil	MEYPPPADLKKFLRPYDREVQKLALNLRALLLEEMAPCYENIYDAYSAVAIGYGTSDR
Ga0134123_127654642	3300010403	Terrestrial Soil	MKAAGLTRKHPVPRELVKFLKPYDRAIQDLALRLRELVLQEMAPCHENIYDAYSAV
Ga0137364_109135052	3300012198	Vadose Zone Soil	MSIKPPKELLRFLEPYSRPIRELALGLRELVIDELAPCNENIY
Ga0137382_110080321	3300012200	Vadose Zone Soil	MMKRKPPKELIAFLRPYGPTIRELALSLRELVIGEMAPCYENIY
Ga0137365_111853781	3300012201	Vadose Zone Soil	LEYPAPKELIKFLKPYDREIRELALNLRALVLEEMAPCYENIYD
Ga0137380_113443161	3300012206	Vadose Zone Soil	MKITYPPPAELKKFLTPYDREIQQLALSLRALILEEMAPCYENI
Ga0137376_110891461	3300012208	Vadose Zone Soil	MSFPVPRQLTNFLKPYDPEIRSLAVKLRALVLDEMAPCYENI
Ga0137379_100444261	3300012209	Vadose Zone Soil	MATSAPPALRKFLEPYDREVRDLALKLRALVIEEMAPCYENIYDAYSAVAIGY
Ga0137378_106395231	3300012210	Vadose Zone Soil	RPYSLKYPTPTALIKFLKSYDQEVRDLALKLRALVLEEMAPCFENIYDA*
Ga0137378_114541191	3300012210	Vadose Zone Soil	MATSAPPALRKFLEPYDREVRDLALKLRALVIEEMAPCYENIYDA
Ga0137447_10714142	3300012226	Soil	MRRHPPPPALVKFLKPYDRAIQDLALKLRSLVLEEMAPCYENIYDAYSAVAIGYGTSERL
Ga0137384_115731711	3300012357	Vadose Zone Soil	MATSAPPALRKFLEPYDREVRDLALKLRALVIEEMAPCYENIYDAYSA
Ga0137368_109871151	3300012358	Vadose Zone Soil	MRRYPPPAALIQFLKPYDRGIQDLALGLRSLVLEEMAPCYENIYDAYNAVAIGYGS
Ga0137360_116264922	3300012361	Vadose Zone Soil	VKYSPPPALLTFLRPYDREVRDLAVRLRALVLEELAPCYENIY
Ga0150984_1129557472	3300012469	Avena Fatua Rhizosphere	MSYPPPAALKKFLRPYDREVQQLALNLRALLLEEMAPCYENIYDAY
Ga0137373_101267651	3300012532	Vadose Zone Soil	MAHRPPPALIRFLKPYDREIRDLALKLRALVLEEMAPCYEN
Ga0137373_104645361	3300012532	Vadose Zone Soil	VNYPPPRELIKFLKPYAPEIRNVALQLRALVLDEMAPCYENIYDAYSA
Ga0137358_104009203	3300012582	Vadose Zone Soil	MNRPPPTLIKFLKPYDREVRDLALQLRSLVLEEMAPCYENIYDAY
Ga0137395_107121102	3300012917	Vadose Zone Soil	MRRRHPPSELIRFLKPYDRETRHLALSLRSLVLEEMAPCHENIYDAYSAVAMGYGPT
Ga0137394_114229542	3300012922	Vadose Zone Soil	MTHRPPPSLIKFLKPYDREIQDLAVKLRALVLEEMAPCYE
Ga0137359_103301992	3300012923	Vadose Zone Soil	MAHRPPPSLTKFLKPFDPEIQELALELRALVLEEMAPCYENIYDAYSA
Ga0137407_108650122	3300012930	Vadose Zone Soil	MSFPVPRQLTNFLKPYDPEIRSLAVKLRVLVLEEMGPCYENIYDAYSAVAIGYG
Ga0126375_113437532	3300012948	Tropical Forest Soil	VKYSVPLSLRTFLKPYDPSVRSLALQLRAVLLEEIGPCYENIYDAYSAVAIGY
Ga0134076_102516072	3300012976	Grasslands Soil	VDYPPPAALRKFLRSYDGEIQNLALNLRALVLEELGPCYENIYDAYSAVAIGYGT
Ga0157378_100357594	3300013297	Miscanthus Rhizosphere	MKYPPPAALKKFLKPYDREVRDLALGLRALLLEEMAPCYENIY
Ga0163162_104109272	3300013306	Switchgrass Rhizosphere	MNYPPPAALKKFLKPYDAEIRDLALQLRALVLEEMEPCYENIYDAY
Ga0157375_114594441	3300013308	Miscanthus Rhizosphere	VKYSVPAALRKFLKPYDREVRDLAIEVRQLMLEEMAPCYENIY
Ga0134079_106306552	3300014166	Grasslands Soil	MKYPPPAVLKKFLKPYDREVRDLALGLRALLLEEMAPCYE
Ga0163163_109237742	3300014325	Switchgrass Rhizosphere	MNYPPPAALKKFLKPYDAEIRDLALQLRALVLEEMAPCYENI
Ga0157380_135192591	3300014326	Switchgrass Rhizosphere	MSIKPPAELVKFLKPYDRAIQKLALDLRLIVIEELAPCYENIYD
Ga0167660_10377071	3300015078	Glacier Forefield Soil	MKHPPPAALIKFLKPYEREVRDLALGLRAVVLDEMAPCYENIYDAYSAVAIGYGT
Ga0137409_102436191	3300015245	Vadose Zone Soil	VTHQPPPALIKFLKPYDREIQGLALKLRALVLEEMAPCYENIYDAYSAV
Ga0137409_103452801	3300015245	Vadose Zone Soil	MSGSDMSHVPPAALIKFLKPYDREIQDLALKLRALVLEEM
Ga0132258_107287521	3300015371	Arabidopsis Rhizosphere	VKYSVPAALRKFLKPYDREVRDLAIEVRQLMLEEMAPCYENI
Ga0132256_1007403831	3300015372	Arabidopsis Rhizosphere	VKYPPPRELLKFLKPYDKATRDLALQLRALLLEEMAPCYENIYDAYSAVAI
Ga0184619_100427531	3300018061	Groundwater Sediment	MTPTKRLRKHPAPRALVKFLKPYDPAIQELALGLRSLLLEEMAPC
Ga0184628_104315681	3300018083	Groundwater Sediment	MNYPPPAALKKFLKPYDAEIKDLALQLRGLVLEEMAPCFENIYD
Ga0193717_11249152	3300020060	Soil	MSRRHPPPPDLVKFLKPYDRAVQKLALNLRLLVLEEMAPCYENIYDAYSAVAIGYGTSDR
Ga0210380_101507452	3300021082	Groundwater Sediment	MNYPPPAALKKFLKPYDAEIRELALQLRVLVLEEMAPCYENIYDAYSAVAI
Ga0233358_1053021	3300023014	Soil	MPRHKPPPDLIKFLKPYDRAVQQLALGLRALVLEEMAPCHENIYDAYSAVAIGYGPTD
Ga0207684_109777602	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPHPPPSALIKFLKPYDREIRDLALELRALVLEEMGPCYENIYD
Ga0207646_109764642	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVESRNTTYPPPAALKKFLKPYDGEIQQLALDLRALVLEEMAPCY
Ga0207646_110707642	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAPPAALIKFLKPYDRKIQKLALKLRALVLKEMAPCYENI
Ga0207687_119251491	3300025927	Miscanthus Rhizosphere	MTHPPPPALIKFLKPYDREIQDLALALRALVLEEVAPC
Ga0207644_114354912	3300025931	Switchgrass Rhizosphere	MIYPPPAALKKFLKPYDAEIRDLALQLRALVLEEMAPCYENIY
Ga0207709_111507272	3300025935	Miscanthus Rhizosphere	VKYSVPAALRKFLKPYDREVRDLAIEVRQLMLEEMAPCYENIYDAYSAVAIGYGTSE
Ga0207651_110067121	3300025960	Switchgrass Rhizosphere	MDMSSYPPPAELIRFLKPYDKAVRELALGLRRLVIEEMAPCYENIYDAYN
Ga0207676_111040001	3300026095	Switchgrass Rhizosphere	MVRYKPPAALIKFLKPYDREVQKLALDLRTLVLEEMAPCHENIYDAYSAVAMG
Ga0209027_13195222	3300026300	Grasslands Soil	LSYPPPPALKKFLKPYEPSVRDLALQLRALLLGEMAPCYENIYDAYSAVAI
Ga0209474_104286652	3300026550	Soil	LNHPPPKKLLKFLKPYDSGVRDLALQLRGLLLEEMAPCYENIYDA
Ga0209648_106778812	3300026551	Grasslands Soil	MPHPPPSALIKFLKPYDREIQKLALQVRALVLEEMAPCYENIYDAYS
Ga0209799_11482031	3300027654	Tropical Forest Soil	MHPPPAALKKFLKPYDPEVRDLALKLRSLVLEEMAPCYENIYDAYSAVAIGYDSIF
Ga0209485_10254231	3300027691	Agricultural Soil	MPNQPPAELIEFLKPYDRAIQKLALDLRKIVIEELAPCHENIYDAYSAVAIGYGSSERFS
Ga0209283_105729341	3300027875	Vadose Zone Soil	LARQSPPAALIKFLRPYDPEIRELALQLRALVLEEMAPCYENIYDAYSAVAIGYGT
Ga0307504_100668171	3300028792	Soil	MKYSQPPALIKFLKPYDREIRELALQLRALLLEEIGPCYENIYDAYSAVAIGYGAS
Ga0310897_106165162	3300032003	Soil	MSHSPPATLKKFLKPYDPKVRALALQLRALVLEEMAPCYENIYDAYSAVAIG
Ga0310911_107085832	3300032035	Soil	MAHPCPADLKKFLRPYDRDVQQLALGLRALLLEEMAPCYENIYDAY
Ga0307472_1012919791	3300032205	Hardwood Forest Soil	MRHPPPKELLQFLEPYDRPIRELALATRNLVLEEMAPCIENMYDAYSAVALGY
Ga0307472_1017193282	3300032205	Hardwood Forest Soil	VKFPPPKELIKFLRPYDPSVRELALGLRELVLQEMAPCYENIYDAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065019

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences