Metagenome / Metatranscriptome Family F064992

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064992
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	51 residues
Representative Sequence	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY
Number of Associated Samples	63
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.04 %
% of genes near scaffold ends (potentially truncated)	34.38 %
% of genes from short scaffolds (< 2000 bps)	89.84 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.375 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (27.344 % of family members)
Environment Ontology (ENVO)	Unclassified (55.469 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.812 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.54% β-sheet: 0.00% Coil/Unstructured: 41.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04392	ABC_sub_bind	3.12
PF00027	cNMP_binding	2.34
PF04226	Transgly_assoc	1.56
PF00583	Acetyltransf_1	1.56
PF13419	HAD_2	1.56
PF03457	HA	0.78
PF05532	CsbD	0.78
PF08240	ADH_N	0.78
PF13493	DUF4118	0.78
PF04828	GFA	0.78
PF09866	DUF2093	0.78
PF00589	Phage_integrase	0.78
PF01042	Ribonuc_L-PSP	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.12
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.56
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.78
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
All Organisms	root	All Organisms	15.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
cellular organisms	root	All Organisms → cellular organisms	15.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.38 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1036260	Not Available	768	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1046648	Not Available	778	Open in IMG/M
3300005332\|Ga0066388_100580787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1746	Open in IMG/M
3300005332\|Ga0066388_101330320	Not Available	1241	Open in IMG/M
3300005332\|Ga0066388_102109357	Not Available	1014	Open in IMG/M
3300005332\|Ga0066388_106343658	Not Available	596	Open in IMG/M
3300005332\|Ga0066388_106474203	Not Available	590	Open in IMG/M
3300005363\|Ga0008090_14126571	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_100637858	Not Available	1858	Open in IMG/M
3300005764\|Ga0066903_101300300	Not Available	1358	Open in IMG/M
3300005764\|Ga0066903_101436370	Not Available	1298	Open in IMG/M
3300005764\|Ga0066903_102041395	Not Available	1102	Open in IMG/M
3300005764\|Ga0066903_102123720	Not Available	1082	Open in IMG/M
3300005764\|Ga0066903_102222210	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300005764\|Ga0066903_102345686	Not Available	1031	Open in IMG/M
3300005764\|Ga0066903_103067161	Not Available	904	Open in IMG/M
3300005764\|Ga0066903_103115745	Not Available	897	Open in IMG/M
3300005764\|Ga0066903_103201207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300005764\|Ga0066903_105259457	Not Available	684	Open in IMG/M
3300005764\|Ga0066903_105935186	Not Available	640	Open in IMG/M
3300005764\|Ga0066903_105949584	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_106067350	Not Available	632	Open in IMG/M
3300005764\|Ga0066903_108096419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300005764\|Ga0066903_109003661	Not Available	505	Open in IMG/M
3300006854\|Ga0075425_101181794	Not Available	870	Open in IMG/M
3300006954\|Ga0079219_11815455	Not Available	571	Open in IMG/M
3300009792\|Ga0126374_10025687	Not Available	2673	Open in IMG/M
3300010048\|Ga0126373_10274914	Not Available	1669	Open in IMG/M
3300010048\|Ga0126373_11265286	Not Available	804	Open in IMG/M
3300010358\|Ga0126370_10364795	Not Available	1173	Open in IMG/M
3300010358\|Ga0126370_12079546	Not Available	557	Open in IMG/M
3300010359\|Ga0126376_12899544	Not Available	529	Open in IMG/M
3300010360\|Ga0126372_10000918	All Organisms → cellular organisms → Bacteria → Proteobacteria	11291	Open in IMG/M
3300010360\|Ga0126372_11150666	Not Available	797	Open in IMG/M
3300010360\|Ga0126372_12003330	Not Available	626	Open in IMG/M
3300010361\|Ga0126378_10238878	Not Available	1907	Open in IMG/M
3300010361\|Ga0126378_11034488	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300010361\|Ga0126378_13134326	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10549586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300010366\|Ga0126379_13340726	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_100039856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5690	Open in IMG/M
3300010376\|Ga0126381_100085251	Not Available	3989	Open in IMG/M
3300010376\|Ga0126381_100136493	Not Available	3200	Open in IMG/M
3300010376\|Ga0126381_101264813	Not Available	1066	Open in IMG/M
3300010376\|Ga0126381_102446026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300010398\|Ga0126383_10574973	Not Available	1195	Open in IMG/M
3300012971\|Ga0126369_10425341	Not Available	1372	Open in IMG/M
3300012971\|Ga0126369_12963154	Not Available	556	Open in IMG/M
3300012971\|Ga0126369_13278225	Not Available	530	Open in IMG/M
3300016294\|Ga0182041_10229356	Not Available	1499	Open in IMG/M
3300016319\|Ga0182033_10564842	Not Available	985	Open in IMG/M
3300016357\|Ga0182032_10617560	Not Available	903	Open in IMG/M
3300016404\|Ga0182037_10014676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4638	Open in IMG/M
3300016404\|Ga0182037_11372426	Not Available	624	Open in IMG/M
3300016422\|Ga0182039_11075794	Not Available	723	Open in IMG/M
3300016422\|Ga0182039_11605481	Not Available	594	Open in IMG/M
3300016445\|Ga0182038_10784069	Not Available	835	Open in IMG/M
3300018060\|Ga0187765_10632393	Not Available	695	Open in IMG/M
3300018060\|Ga0187765_11344512	Not Available	508	Open in IMG/M
3300021560\|Ga0126371_10227744	Not Available	1971	Open in IMG/M
3300021560\|Ga0126371_10828432	Not Available	1071	Open in IMG/M
3300021560\|Ga0126371_10832093	Not Available	1069	Open in IMG/M
3300021560\|Ga0126371_11196766	Not Available	896	Open in IMG/M
3300021560\|Ga0126371_11507676	Not Available	801	Open in IMG/M
3300021560\|Ga0126371_11601389	Not Available	777	Open in IMG/M
3300021560\|Ga0126371_12376698	Not Available	641	Open in IMG/M
3300021560\|Ga0126371_12404171	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_13333633	Not Available	543	Open in IMG/M
3300021560\|Ga0126371_13904059	Not Available	502	Open in IMG/M
3300026845\|Ga0207760_114326	Not Available	646	Open in IMG/M
3300026927\|Ga0207744_1027772	Not Available	526	Open in IMG/M
3300026979\|Ga0207817_1014700	Not Available	868	Open in IMG/M
3300027042\|Ga0207766_1014755	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300027043\|Ga0207800_1009654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1766	Open in IMG/M
3300027049\|Ga0207806_1025617	Not Available	680	Open in IMG/M
3300027680\|Ga0207826_1000527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10688	Open in IMG/M
3300027680\|Ga0207826_1109200	Not Available	760	Open in IMG/M
3300027703\|Ga0207862_1020090	Not Available	1993	Open in IMG/M
3300027703\|Ga0207862_1148628	Not Available	701	Open in IMG/M
3300027703\|Ga0207862_1264382	Not Available	503	Open in IMG/M
3300027874\|Ga0209465_10005057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5745	Open in IMG/M
3300027874\|Ga0209465_10059066	All Organisms → cellular organisms → Bacteria → Proteobacteria	1846	Open in IMG/M
3300027874\|Ga0209465_10129986	Not Available	1245	Open in IMG/M
3300031543\|Ga0318516_10282452	Not Available	960	Open in IMG/M
3300031545\|Ga0318541_10852957	Not Available	508	Open in IMG/M
3300031573\|Ga0310915_10535916	Not Available	831	Open in IMG/M
3300031680\|Ga0318574_10283786	Not Available	961	Open in IMG/M
3300031719\|Ga0306917_10239562	Not Available	1387	Open in IMG/M
3300031719\|Ga0306917_10670792	Not Available	815	Open in IMG/M
3300031744\|Ga0306918_10017822	All Organisms → cellular organisms → Bacteria → Proteobacteria	4229	Open in IMG/M
3300031744\|Ga0306918_10445658	Not Available	1011	Open in IMG/M
3300031777\|Ga0318543_10053963	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300031795\|Ga0318557_10012599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3131	Open in IMG/M
3300031797\|Ga0318550_10465723	Not Available	611	Open in IMG/M
3300031798\|Ga0318523_10591643	Not Available	546	Open in IMG/M
3300031819\|Ga0318568_10669964	Not Available	645	Open in IMG/M
3300031833\|Ga0310917_10531364	Not Available	800	Open in IMG/M
3300031835\|Ga0318517_10485012	Not Available	557	Open in IMG/M
3300031879\|Ga0306919_10210386	Not Available	1449	Open in IMG/M
3300031879\|Ga0306919_10581272	Not Available	864	Open in IMG/M
3300031879\|Ga0306919_10889328	Not Available	683	Open in IMG/M
3300031879\|Ga0306919_10898177	Not Available	679	Open in IMG/M
3300031880\|Ga0318544_10346671	Not Available	577	Open in IMG/M
3300031890\|Ga0306925_10517755	Not Available	1269	Open in IMG/M
3300031890\|Ga0306925_11667527	Not Available	617	Open in IMG/M
3300031890\|Ga0306925_11948179	Not Available	557	Open in IMG/M
3300031894\|Ga0318522_10342719	Not Available	566	Open in IMG/M
3300031910\|Ga0306923_12351165	Not Available	530	Open in IMG/M
3300031910\|Ga0306923_12378840	Not Available	526	Open in IMG/M
3300031912\|Ga0306921_10963796	Not Available	964	Open in IMG/M
3300031945\|Ga0310913_10066240	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300031945\|Ga0310913_10703540	Not Available	715	Open in IMG/M
3300031945\|Ga0310913_10736213	Not Available	697	Open in IMG/M
3300031947\|Ga0310909_11325000	Not Available	578	Open in IMG/M
3300031954\|Ga0306926_10512777	Not Available	1473	Open in IMG/M
3300032001\|Ga0306922_10319338	Not Available	1667	Open in IMG/M
3300032001\|Ga0306922_10842172	Not Available	956	Open in IMG/M
3300032001\|Ga0306922_11077833	Not Available	825	Open in IMG/M
3300032041\|Ga0318549_10565824	Not Available	510	Open in IMG/M
3300032052\|Ga0318506_10565644	Not Available	503	Open in IMG/M
3300032076\|Ga0306924_11262353	Not Available	796	Open in IMG/M
3300032076\|Ga0306924_12219149	Not Available	559	Open in IMG/M
3300032076\|Ga0306924_12598159	Not Available	505	Open in IMG/M
3300032261\|Ga0306920_100150737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3464	Open in IMG/M
3300032261\|Ga0306920_101484990	Not Available	968	Open in IMG/M
3300032261\|Ga0306920_103681735	Not Available	563	Open in IMG/M
3300033290\|Ga0318519_10426960	Not Available	792	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.44%
Aquatic	Environmental → Aquatic	0.78%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.44%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.53%
Loam	Environmental → Terrestrial → Soil → Loam	27.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	27.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10362602	3300000580	Forest Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY*
AF_2010_repII_A100DRAFT_10466481	3300000655	Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY*
Ga0066388_1005807872	3300005332	Tropical Forest Soil	MQVHSDRYTTQIMNVEAHHQGWRTLWLTIAGVMAITLTWNVLMLSLNGISY*
Ga0066388_1013303203	3300005332	Tropical Forest Soil	MQAHSDRYATQVVHVERSEGRDEGWRTLWLAIAGVMAITLTWNVLMLSLNGIAY*
Ga0066388_1021093571	3300005332	Tropical Forest Soil	MLVHSDRYATQIMNTDKFEAHHEGWRTLWFAIAGVMIITLTWNVLMLSLNGISY*
Ga0066388_1063436581	3300005332	Tropical Forest Soil	TQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0066388_1064742031	3300005332	Tropical Forest Soil	QIINAEKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY*
Ga0008090_141265712	3300005363	Tropical Rainforest Soil	MQVHSDRHATQIMNAEKVEAHQEGWQTLWFAIAGVMAITLLWNVLMLSLNGISY*
Ga0066903_1006378583	3300005764	Tropical Forest Soil	MQVPSDRYATQIADNEKFERLHEGRKALWLAVAGVLAITLTWNVLILGLHGFSY*
Ga0066903_1013003003	3300005764	Tropical Forest Soil	MQAHSDRYATQIMNTDKFEAHHEGWRTLWFAIASVMAITLAWNVLMLSFNGISY*
Ga0066903_1014363704	3300005764	Tropical Forest Soil	MQAHSDRYATQIINADKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY*
Ga0066903_1020413953	3300005764	Tropical Forest Soil	MQAHSDRYATQIINAEKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY*
Ga0066903_1021237202	3300005764	Tropical Forest Soil	MQVRSDRYATQTMSAEKFEAHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
Ga0066903_1022222102	3300005764	Tropical Forest Soil	MQVHSDRYAAQIVKAENLEAHHEGWRTLWFAIAGVMAITLAWNVLMLSANGISY*
Ga0066903_1023456863	3300005764	Tropical Forest Soil	MQAHSDRYATQIVNTEKLEAHHEWRTLWFAIAGVMAITLAWNVLMLSLNGISY*
Ga0066903_1030671612	3300005764	Tropical Forest Soil	MQAHSERYATQIINADRFEAHHEGWRTLWFAIAGVMAITL
Ga0066903_1031157452	3300005764	Tropical Forest Soil	MQVLSGRCATQTMDAEKFEAHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
Ga0066903_1032012073	3300005764	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMGITLTWNVLMLSLNGISY*
Ga0066903_1052594571	3300005764	Tropical Forest Soil	MQVHSDRYTTQIMNVEAHHEGWRSLWLAIAGVMGITLTWNILMLS
Ga0066903_1059351861	3300005764	Tropical Forest Soil	VHSDRSATQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY*
Ga0066903_1059495841	3300005764	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0066903_1060673502	3300005764	Tropical Forest Soil	MQAHSDRYATQILNADRFEAHHEGWRTLWFAIAGVMAITLAWNVL
Ga0066903_1080964192	3300005764	Tropical Forest Soil	MRTLSDRYTTQIINTENFEGHREGWRTLWLAIAGVMAITLAWNVLMLSLNGISY*
Ga0066903_1090036611	3300005764	Tropical Forest Soil	TDMQAHSDRYATQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0075014_1009952991	3300006174	Watersheds	MQSLSDRYGSQFLKSEAMVAEKFESHHEGWRTLWLAIAGVMAITLTWNVLMLS
Ga0075425_1011817942	3300006854	Populus Rhizosphere	MQTLSDRYGSQFLKSEAMVAEKFESHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0079219_118154552	3300006954	Agricultural Soil	MQTLSDRYGSQFLKSEAMVAEKSESHHEGWRTLWLAIAGVMAITLTWNVLM
Ga0126374_100256875	3300009792	Tropical Forest Soil	MQVHSDRYTTQIMNVETHHGGWRSLWLAIAGVMGITLTWNILMLSLNGISY*
Ga0126373_102749143	3300010048	Tropical Forest Soil	MQFVSDRYATQTMNAEKFEDHREGWRTLWLAIGGVMAITLTWNVLMLSLNGISY*
Ga0126373_112652862	3300010048	Tropical Forest Soil	MQVHSDRYATQIVNTEKLEAHHEWRTLWFAIAGVMAITLAWNVLMLSLNGISY*
Ga0126370_103647951	3300010358	Tropical Forest Soil	MQAHSDRYATQIVNAEKLEAHHEWRTLWFAITGVMAITLAWNVLMLSFNGISY*
Ga0126370_120795462	3300010358	Tropical Forest Soil	MQAHSDRYATQIINADRFEAHHEGWRTLWFATAGVMAITLAWNVLMLSFNGISY*
Ga0126376_128995442	3300010359	Tropical Forest Soil	MQAHSDRYATQTINADRFEGHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0126372_1000091813	3300010360	Tropical Forest Soil	MQVHSDRYTTQIMNVEAHHDGWRSLWLAIAGVMGITLTWNILMLSLNGISY*
Ga0126372_111506662	3300010360	Tropical Forest Soil	MQAHSDRYTTQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0126372_120033302	3300010360	Tropical Forest Soil	MQAHSDRYATQIINADRFEAHHEGWRTLWFAIAGVMASTLAWNVLMLSFNGISY*
Ga0126378_102388782	3300010361	Tropical Forest Soil	MQAHSDRYATQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0126378_110344881	3300010361	Tropical Forest Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWIAIAGVLAITLTWNVLMLSLNGISY*
Ga0126378_131343262	3300010361	Tropical Forest Soil	MQVLSDQYATQIVNNEKFEGHHEGWRTLWLAIAGVMAITLSWNVLMLSLNGFSY*
Ga0126379_105495861	3300010366	Tropical Forest Soil	TQIINAEKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY*
Ga0126379_133407261	3300010366	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNG
Ga0126381_1000398562	3300010376	Tropical Forest Soil	MRVHSDRYTSQVAKAEKFEDHREGWRTLWFAIAGVMAITLTWNVLMLSLNGISY*
Ga0126381_1000852517	3300010376	Tropical Forest Soil	MQAHSDRYATQIVNAEKLEAHHEWRTLWFAIAGVMAITLAWNVLMLSLNGISY*
Ga0126381_1001364933	3300010376	Tropical Forest Soil	MQFVLDRYATQTMNAEKFEDHREGWRTLWLAIGGVMAITLTWNVLMLSLNGISY*
Ga0126381_1012648131	3300010376	Tropical Forest Soil	MQVHSARYAAQITNVEKFEGHRDRWRTLWLAIGGVMAITLTWNVLILSLNGITY*
Ga0126381_1024460261	3300010376	Tropical Forest Soil	MQAHSDQYATQIINADRFEAHHEGWRTLWFAIAGVMAITL
Ga0126383_105749733	3300010398	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMAITLAWNVLMLSFNGISY*
Ga0126369_104253412	3300012971	Tropical Forest Soil	MQAHSDRYPTQVINTEKFEGNEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0126369_129631541	3300012971	Tropical Forest Soil	MQAHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMGITLTWNVLMLSLNGISY*
Ga0126369_132782252	3300012971	Tropical Forest Soil	MQAHSDRYATQIINADKFEAHHEGWRTFWLAIAGVTAMTLAWNVLMVSLNGISY*
Ga0182041_102293564	3300016294	Soil	MQVLSDRYATQIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSL
Ga0182033_105648424	3300016319	Soil	REDADMQISSDRYATPHEGWRTLWLAIAGVMAITLTWNVLMLSLNAISY
Ga0182032_106175601	3300016357	Soil	MQAHSDRYATQIINADRFEAHHDGWRTLWFAIAGVMAITLAWNALMLSLNGISY
Ga0182037_100146769	3300016404	Soil	MQTLSDHHATHHEGWRTLWLAIVGVMAITLTWNVLMLSLNGISY
Ga0182037_113724261	3300016404	Soil	MQTLSDRYPTQIINSENFEGHDEGWRTLWFAIAGVMTLAWNVLMLSLNGISY
Ga0182039_110757942	3300016422	Soil	MQVHSDRYATQIMNTDKFEAHHDGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0182039_116054811	3300016422	Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGIS
Ga0182038_107840692	3300016445	Soil	DRYPTQIMKAEKFVAHHEGWRTLWFAIAGVMAITLTWNVLMLSLKGISY
Ga0187765_106323931	3300018060	Tropical Peatland	MQVLSNRHATPIVKTEKFESLHEGWKALWLAIAGVIAIMLTWNVLMLSFNGISY
Ga0187765_113445121	3300018060	Tropical Peatland	MQAHSDHRYATQILNADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY
Ga0126371_102277441	3300021560	Tropical Forest Soil	MQAHSDRYATQVVHVERSEGRDEGWRTLWLAIAGVMAITLTWNVLMLSLNGIAY
Ga0126371_108284322	3300021560	Tropical Forest Soil	MQAHSDRYATQIINADKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY
Ga0126371_108320931	3300021560	Tropical Forest Soil	MQAHSDRYATQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFN
Ga0126371_111967662	3300021560	Tropical Forest Soil	MQVLSDRHATQIAHTEKFERQHEAWKALWLAVAGVIAITLAWNVLIVSFNGISY
Ga0126371_115076763	3300021560	Tropical Forest Soil	MQVLSDQYATQIVNNEKFEGHHEGWRTLWLAIAGVMAITLSWNVLMLSLNGFSY
Ga0126371_116013892	3300021560	Tropical Forest Soil	MQVHSDRYATQIVNTEKLEAHHEWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0126371_123766981	3300021560	Tropical Forest Soil	TQIINADRFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY
Ga0126371_124041712	3300021560	Tropical Forest Soil	MQAHSDRYATQIVNAEKLEAHHEWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0126371_133336332	3300021560	Tropical Forest Soil	MQAHSDRYATQIVKAEKLEAHHEGWLTLWFAIAGVMAI
Ga0126371_139040592	3300021560	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHHEGWRTLWLAIAGVMGITLTWNVLMLSLNGISY
Ga0207760_1143262	3300026845	Tropical Forest Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLAWNVLMLGLNGVSY
Ga0207744_10277721	3300026927	Tropical Forest Soil	LHTVRGHSDMRTLSDRYATQIINTEDFEGHHEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY
Ga0207817_10147002	3300026979	Tropical Forest Soil	MQVLSDRYATQIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0207766_10147552	3300027042	Tropical Forest Soil	MQTLSDRYATQIVKAEKLEAHDEGWRTLWLAIAGVMAITLGWNVLMLSLNGISY
Ga0207800_10096543	3300027043	Tropical Forest Soil	MRTLSDRYATQIINTEDFEGHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY
Ga0207806_10256171	3300027049	Tropical Forest Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0207826_10005279	3300027680	Tropical Forest Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLGWNVLMLSLNGISY
Ga0207826_11092002	3300027680	Tropical Forest Soil	MQVLSDRYATQIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY
Ga0207862_10200904	3300027703	Tropical Forest Soil	MQVLSDRYATKIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY
Ga0207862_11486282	3300027703	Tropical Forest Soil	MQVLSDRYATQIVKAEKLEAHHEGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0207862_12643821	3300027703	Tropical Forest Soil	MQVHSDRYATQIINAEKFEDHSEGWRTLWLTIAGVMAITLAWNVLMLGLNGVSY
Ga0209465_100050579	3300027874	Tropical Forest Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY
Ga0209465_100590663	3300027874	Tropical Forest Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWIAIAGVLAITLTWNVLMLSLNGISY
Ga0209465_101299861	3300027874	Tropical Forest Soil	MQVHSDRYTTQIINVEAHHDGWRSLWLAIAGVMGITLTWNILMLS
Ga0318516_102824522	3300031543	Soil	RYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLGWNVLMLSLNGISY
Ga0318541_108529571	3300031545	Soil	MQAHSDRYATQIMNTDKFEAHHEGWRTLWFAIAGVMTLAWNVLMLSLNGISY
Ga0310915_105359161	3300031573	Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLGWNVLM
Ga0318574_102837862	3300031680	Soil	MQAHSDRYATQIVRAEKFEDHHEGWRTLWFAIAGVMGIT
Ga0306917_102395625	3300031719	Soil	VHSDRYVTQIMNADKFEAHHDGWRTLWFAIAGVMAITLAWNALMLSLNGISY
Ga0306917_106707921	3300031719	Soil	MQVHSDRYPTQIMKAEKFVAHHEGWRTLWFAIAGVMAITLTWNVLMLSLKGISY
Ga0306918_100178222	3300031744	Soil	MQPLSDRYRTQIINTENFEGHDEGWRTLWFAIAGVMTLAWNVLMLSLNGISY
Ga0306918_104456581	3300031744	Soil	MPVLSDRYATQIVRAEKLEGHDEGWRILWLAIAGVMAITLGWNVLMLSLNGISY
Ga0318543_100539633	3300031777	Soil	MQAHSDRYATQIVRAEKFEDHHEGWRTLWFAIAGVMGITL
Ga0318557_100125996	3300031795	Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLML
Ga0318550_104657232	3300031797	Soil	MQALSDRYATQIVKAEKLEAHHERWRTLWIAIAGVMAITLAWNVLMQSLNGISY
Ga0318523_105916431	3300031798	Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLGW
Ga0318568_106699641	3300031819	Soil	MQVLSDRYATQIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSSNGVSY
Ga0310917_105313641	3300031833	Soil	TPDMRTLSDRYATQIINPENFDGHGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0318517_104850121	3300031835	Soil	MQVHSDRSATQIVNAEKFEGEGWRTLWIAIAGVLAITLTWNVLM
Ga0306919_102103863	3300031879	Soil	MQAHSDRYATQIVRAEKFEDHHEGWRTLWFAIAGVMGITLAWNVLMLSLNGISY
Ga0306919_105812722	3300031879	Soil	MHANSDRYATQIVKAEKLEAHHERWRTLWIAIAGVMAITLAWNVLMQSLNGISY
Ga0306919_108893283	3300031879	Soil	MQVHSDRYPTQIMKAEKFVAHHEGWRTLWFAIAGVMAITLTWNVLM
Ga0306919_108981772	3300031879	Soil	MQTLSDRYPTQIINSENFEGHDEGWRTLWFAIAGVIAITLAWNVLMLSLNGISY
Ga0318544_103466711	3300031880	Soil	MQPLSDRYRTQIINTENFEGHDEGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0306925_105177552	3300031890	Soil	MQVPSDRYATQIVDNEKFERLHEGWKALWLAVAGVLAITLTWNVLILGLHGFSY
Ga0306925_116675271	3300031890	Soil	MQAHSDRYATQIINAEKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGISY
Ga0306925_119481791	3300031890	Soil	MQAHSDRYATQIMNTDKFEAHHEGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0318522_103427191	3300031894	Soil	MPVLSDRYATQIVRAEKLEGHDEGWRTLWLAIAGVMAITLGWNV
Ga0306923_123511652	3300031910	Soil	MQVPSDRYATQIADNEKFERLHEGWKALWLAVAGVLAITLTWNVLILGLHGFSY
Ga0306923_123788401	3300031910	Soil	MQVHSDRYATQIMNTDKFEAHHDGWRTLWFAIAGVMAITLAWNALMLSLNGISY
Ga0306921_109637964	3300031912	Soil	MRTLSDRYATQIINTENFDGHGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0310913_100662403	3300031945	Soil	MRTLSDRYATQIINTENFDGHGWRTLWFAIAGVMAITLAWNALMLSLNGIIGR
Ga0310913_107035402	3300031945	Soil	VHSDRSATQIVNAEKFEGEGWRTLWIAIAGVLAITLTWNVLMLSLNGISY
Ga0310913_107362131	3300031945	Soil	MQAHSDRYATQIINAEKFEAHHEGWRTLWLAIAGVMAMTLAWNVLMVSLNGI
Ga0310909_113250002	3300031947	Soil	MQAHSDRYATQIMNTDKFEAHHDGWRTLWFAIAGVMAITLAWNALMLSLNGISY
Ga0306926_105127773	3300031954	Soil	MQVHSDRYPTQIMKAEKFVAHHEGWRTLWFAIAGVMAITLTWNVLMLS
Ga0306922_103193384	3300032001	Soil	MQVPSDRYATQIVDKEKFERLHEGWKALWLAVAGVLAITLTWNVLILGLHGFSY
Ga0306922_108421724	3300032001	Soil	MQVHSDQYATQIINAEKFEGNEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY
Ga0306922_110778332	3300032001	Soil	MQVHSDRYATQVINAEKFGDHREGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318549_105658241	3300032041	Soil	SDRYATQIINAEKLENHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318506_105656441	3300032052	Soil	MQTLSDRYPTQIINSENFEGHDEGWRTLWFAIAGVIAITLAWNVLM
Ga0306924_112623533	3300032076	Soil	MQAHSDRYATQIVKSEKLEAHHEGWRTLWFAIAGVMAITLAWNVLMLSLNGISY
Ga0306924_122191491	3300032076	Soil	MQVLSDRYATQIINAEKLEAHHEGWRTLWLAIAGVMAITLTWNVLML
Ga0306924_125981591	3300032076	Soil	QVHSDRYVTQIMNADKFEAHHDGWRTLWFAIAGVMAITLAWNALMLSLNGISY
Ga0306920_1001507377	3300032261	Soil	MRTLSDRYATQIINTENFDGHGWRTLWFAIAGVMAITLAWNVLMLS
Ga0306920_1014849904	3300032261	Soil	MQAHSDRYATQIVKAEKLEAHHEGWRTLWIAITGVMALTLAWNVLMQSLSGISD
Ga0306920_1036817351	3300032261	Soil	MQVLSDRYATQIINAEKLEAHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318519_104269602	3300033290	Soil	MQPLSDRYRTQIINTENFEGHDEGWRTLWFAIAGVMTLAWNVLM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064992

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences