NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064957

Metagenome / Metatranscriptome Family F064957

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064957
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 69 residues
Representative Sequence MGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGS
Number of Associated Samples 108
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.406 % of family members)
Environment Ontology (ENVO) Unclassified
(27.344 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.906 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.61%    β-sheet: 0.00%    Coil/Unstructured: 46.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00155Aminotran_1_2 34.38
PF13490zf-HC2 10.16
PF07690MFS_1 2.34
PF08281Sigma70_r4_2 2.34
PF07992Pyr_redox_2 0.78
PF00291PALP 0.78
PF03404Mo-co_dimer 0.78
PF05977MFS_3 0.78
PF01636APH 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil7.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.69%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.12%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.12%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.12%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.34%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.34%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.56%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.78%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10684740823300000956SoilMSIINRRNAVLGWGVWQLTKVTARRKAKQAVPGTGGHAGLNKSALAGIGAATVAALLFWRKKSEDSSSAGT*
C688J18823_1032502323300001686SoilMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGQGEYAGLNKSALATIGAATLAALLFWRKKTDAPNSGP*
C688J18823_1091773713300001686SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASMAAAVGGVLWIWRKKSDETPGT*
JGI24744J21845_1004475623300002077Corn, Switchgrass And Miscanthus RhizosphereGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0063454_10090365623300004081SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGVLWIWRKKSDETPGT*
Ga0062589_10049992313300004156SoilMSIINRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGVGAATLAALLFWRKKSDGSFSSGS*
Ga0062589_10151960423300004156SoilMSIFNRRNALLGWGVWQVTKIVARRKAKQAVPGTGEHAGLNKGAIAGIGAATVAAVLFWRKKSEESSSPVS*
Ga0063356_10005793033300004463Arabidopsis Thaliana RhizosphereMGIINRRNAVLGWAVWQFAKQQGKRKAKSAGGEHAALKKGGAIASVFAAVGGAVWFWRRKSDETPGSGS*
Ga0062595_10009926823300004479SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASMAAAVGGALWIWRKKSDETHGT*
Ga0062595_10026978223300004479SoilMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATLGAATVAALLFWRKKSDDSSDSGS*
Ga0062595_10077380623300004479SoilMGIVNRRNAVLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALATIGAATLAALLFWRKKTDAPDSGS*
Ga0062591_10280574513300004643SoilRNAVLGWSVWQIAKTVAKRKAKQATPGTSERSGLKRGAVAGVGAATLAALLFWRKKSEESPTSGS*
Ga0062594_10161761713300005093SoilMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANVGLSKGALATIGAATVAALLFWRKKSDDSSDSGS*
Ga0062594_10171884623300005093SoilMGIVNRRNAVLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALATIGAAILAALLFWRKKTDAPDSGS*
Ga0062594_10192888823300005093SoilMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFWHKKSDESTSGS*
Ga0066815_1004510923300005164SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGVLWIWRKKSDETPGT*
Ga0066673_1046346213300005175SoilMSIINRRNAVLGWGVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS*
Ga0070690_10011233523300005330Switchgrass RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0066388_10004238823300005332Tropical Forest SoilMSIFNRRNATFGWVVWMALKTFARQKARQAVPGRGDYAGLNKGALASIGATALAAFAALVFWRKKSDSPAAGSE*
Ga0066388_10859625023300005332Tropical Forest SoilMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVSGAAGHAGLSKGALATIGAATVAALLFWRKKSDDSPDSAS*
Ga0070666_1004100233300005335Switchgrass RhizosphereMGIVNRRNALLGWGVWKLAKEFGRQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0070713_10038417523300005436Corn, Switchgrass And Miscanthus RhizosphereMGVVNRRNAMLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDEPDSGS*
Ga0070705_10033009113300005440Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGT*
Ga0070708_10179096923300005445Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDE
Ga0066681_1028278013300005451SoilMSIINRRNAVLGWSVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS*
Ga0070681_1089540423300005458Corn RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0070699_10201640013300005518Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWR
Ga0073909_1011680323300005526Surface SoilMGFVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGT*
Ga0073909_1041840523300005526Surface SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETRGT*
Ga0070672_10002752053300005543Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGR*
Ga0070695_10082730813300005545Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPG
Ga0068855_10238856513300005563Corn RhizosphereVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATLGAASVAALLFWRKKSDDSSDSGS*
Ga0066654_1006771923300005587SoilMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGPGGYAGLNKSALATIGAATLAALLFWRKKTDAPNSGP*
Ga0068864_10186518013300005618Switchgrass RhizosphereSSRESHLGRLAHERRPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0068864_10249884413300005618Switchgrass RhizosphereVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFWHKKSDESTSGS*
Ga0066905_10007405113300005713Tropical Forest SoilMSILNRRNALLGWGVWQVTKIVARRKAKQAVTSPGEHAGLSKVAIAGIGAATVAALLFWRKKSDESSSTVL*
Ga0068858_10141013613300005842Switchgrass RhizosphereSHLGRLAHERRPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR*
Ga0070717_1031875323300006028Corn, Switchgrass And Miscanthus RhizosphereMGVVNRRNAMLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDAPDSGS*
Ga0066696_1029923213300006032SoilMGIMNRRNAVLGWGVWKLGKKVAKRKAKTAVPGTGEHAGLNKSALATIAATVGGALFFWR
Ga0066652_10006860313300006046SoilMGIINRRNAVLGWAVWKITKAFGRQKAKEAVPGSGDYAGLNKGALATIGAATLAALLFWRKKSDDAPGS
Ga0066652_10096427023300006046SoilMGIVNRRNAFLGWGVWKLAKRVGKRKAKAAVPGPGDHAGLNKGAIASMVAAVGGAL
Ga0070712_10175028413300006175Corn, Switchgrass And Miscanthus RhizosphereMGVVNRRNAVLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDEPD
Ga0097621_10052672333300006237Miscanthus RhizosphereMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFW
Ga0074055_1184765913300006573SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETSGT*
Ga0074056_1002841923300006574SoilPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETSGT*
Ga0074054_1000727623300006579SoilPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGVLWIWRKKSDETPGT*
Ga0074054_1149138423300006579SoilMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAVGAGLLWFWHKKSDESTSGS*
Ga0074062_1232763313300006606SoilINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAGAGLLWFWHKKSDESTSGS*
Ga0079222_1053463923300006755Agricultural SoilMSIINRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHGGLNKSAIAGLGAATLAALLFWRKKSDGSLSNGS*
Ga0075433_1094437123300006852Populus RhizosphereMGIINRRNAILGWAVWKVTKAFGKQKAREAVPGTGDYAGLNKGAIATAGAATLAALLFWRKKSDDTPSSGS*
Ga0075425_10178609423300006854Populus RhizosphereMGMVNRRHALLGWAVWKIGKVVGKKKAKKSLWRGGDHAGLSKGALATIGAATVAAVLFWRKKSDDSSDNGS*
Ga0074063_1428223413300006953SoilSSRESHLGRLAHERRPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETTGT*
Ga0111539_1063405323300009094Populus RhizosphereMSIINRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGVGAATLAALLFWRKKSDGSLSSGS*
Ga0105245_1160414723300009098Miscanthus RhizosphereMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFWHKKSDESTSRS*
Ga0105242_1229533013300009176Miscanthus RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNEGALASIAAAAGGALWIWRKKSDETPGR*
Ga0126382_1142728823300010047Tropical Forest SoilSIINRRNALLGWGVWQVTKGFARRKAKQTVPGTGDHGGLKKGAVAGVGAATLAALLLRRKKSDDSSAAS*
Ga0126319_114922713300010147SoilMGIINRRNAVLGWGVWKITKEFGKQKARAAVPGTGEHVGLNKGAIASMLAAAGGALWIWRKKSDEATPGS*
Ga0126319_139410213300010147SoilDAMGIVNRRNAVLGWAVWQVGKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAGAGLLWFWHKKSDESTSGS*
Ga0127503_1120616023300010154SoilVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETSGT*
Ga0134070_1017757123300010301Grasslands SoilMSIINRRNAVLGWSVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSLSNGS*
Ga0134084_1044191113300010322Grasslands SoilMAIVNRRNALIGWSVLQIGKRVAKRKAKEAVPGPGDHAGLNKSAIATIAATAGGAL
Ga0134080_1056013013300010333Grasslands SoilMSIINRRNAVLGWSVWQIAKTTSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS*
Ga0134128_1305857823300010373Terrestrial SoilMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATIGAATVAALLFWRKKSDDSSDSGS*
Ga0126383_1028030323300010398Tropical Forest SoilMSIINRRNAIFGWVVWMALKAFGKQKAKQVVPGSGDFAGLNKGAIASIGAATLAALLFWRKKAAHSPSAGS*
Ga0134127_1276775623300010399Terrestrial SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGT*
Ga0134122_1000981213300010400Terrestrial SoilMGFVNRRNALLGWGVWKLAKEFGKQTAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETP
Ga0134122_1187580423300010400Terrestrial SoilMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANSGLSKGALATIGAATVAALLFWRKKSDDSSDSGS*
Ga0138505_10000484223300010999SoilMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWI
Ga0137382_1034476213300012200Vadose Zone SoilMSIVNRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGLGAATLAALLFWR
Ga0137374_10006841113300012204Vadose Zone SoilMGIINRRNAVLGWGVWKVAKRFGKRKAREAVPGSGEHAGLNKSAIASIFAAVGALWFWRKKSDETPS*
Ga0137376_1001516923300012208Vadose Zone SoilMSIVNRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGLGAATLAALLFWRKKSDGSLGSGS*
Ga0150985_10234223423300012212Avena Fatua RhizosphereMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGAGEHAGLNKGALATIGAATLAALLFWRKKTDAPNSGS*
Ga0150985_11921721513300012212Avena Fatua RhizosphereMGIVNRRNAMLGWAVWKVTKAFGKQKAKEAVPGPGEYAGLNKGALATIGAATLAALLFWRKKTDAPDSGS*
Ga0137370_1029310423300012285Vadose Zone SoilMSIINRRNAVLGWSVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFSSGS*
Ga0134050_122244113300012407Grasslands SoilADMSIINRRNAVLGWSVWQLAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS*
Ga0162652_10000362323300012941SoilMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWIWRKKSDETPGT*
Ga0164300_1069581023300012951SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKS
Ga0164298_1014564323300012955SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPE*
Ga0164303_1002660023300012957SoilMGIVNRRNALLGWGVWKMAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPE*
Ga0164299_1028473523300012958SoilMGIVNRRNALLGWGVWKMAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGT*
Ga0164302_1028246023300012961SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGT*
Ga0164302_1101871213300012961SoilMSIFNRRNAVLGWGVWQVAKGVAKRKAKQATPGTSERSGLKKSAVAGAGAAALAALLFWRKKSEETPTSGS*
Ga0164309_1034478123300012984SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHVGLNKGALASIAAAAGGALWIWRKKSDETPGT*
Ga0164304_1008649923300012986SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGS*
Ga0164307_1050671423300012987SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETPRT*
Ga0164305_1032413023300012989SoilMGIVNRRNALLGWGVWKMAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETRGT*
Ga0157369_1239397323300013105Corn RhizosphereMSIFNRRNALLGWGVWQVTKIVARRKAKQAVPGTGEHAGLNKGAIAGIGAATVAAVLFWRKKS
Ga0157374_1174329723300013296Miscanthus RhizosphereVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATLGAATVAALLFWRKKSDDSSDSGS*
Ga0134081_1010962023300014150Grasslands SoilMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGPGGHAGLNKSALATIGAATLAALLFWRKKTDAPNSGP*
Ga0134078_1011092813300014157Grasslands SoilMSIINRRNAVLGWGVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLRAATVAALLFWRKKSDGSFTSGS*
Ga0132258_1048570533300015371Arabidopsis RhizosphereMGIVNRRNAVLGWSVWKIGKAVGKRKAKQAVPRTGAHAGLNKGTLATIGAATVAALIFWRKKSDDSPDSGS*
Ga0132256_10016999623300015372Arabidopsis RhizosphereMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGAVATLGAATVAALLFWRKKSDDSSDSGS*
Ga0132256_10293971413300015372Arabidopsis RhizosphereMGIVNRRNAVLGWSVWKIGKAVGKRKAKQAVPRTGAHAGLNKGTLATIGAATVVALIFWRKKSDDSPDS
Ga0163161_1110597813300017792Switchgrass RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR
Ga0184608_1000211833300018028Groundwater SedimentMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWIWRKKSDETPGT
Ga0066655_1142944123300018431Grasslands SoilMGIVNRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGLGAATLAALLFWRKKSDGSLSNGS
Ga0066667_1025233923300018433Grasslands SoilMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGPGGYAGLNKSALATIGAATLAALLFWRKKTDAPNSGP
Ga0066669_1000893453300018482Grasslands SoilMSIINRRNAVLGWSVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS
Ga0193700_100765723300019873SoilMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWIWRKKSDETSGT
Ga0193715_106702413300019878SoilASSRESHLGRLAHERRPMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWIWRKKSDETPGT
Ga0207692_1032665223300025898Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATIGAATVAALLFWRKKSDDSSDSGS
Ga0207692_1059687823300025898Corn, Switchgrass And Miscanthus RhizosphereNRRNAVLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDEPDSGS
Ga0207707_1067589423300025912Corn RhizosphereMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGR
Ga0207707_1158730413300025912Corn RhizosphereMSIFNRRNALLGWGVWQVTKIVARRKAKQAVPGTGEHAGLNKGAIAGIGAATVAAVLFWRKK
Ga0207671_1046395713300025914Corn RhizosphereMGIVNRRNALLGWGVWKLAKEFGRQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDET
Ga0207693_1015235213300025915Corn, Switchgrass And Miscanthus RhizosphereMGIVNRRNAVLGWGVWKIGKAVGKRKAKQAVPRTGANGGLSKGALATLGAATVAALIFWRKKSDDSSDGGS
Ga0207660_1076004713300025917Corn RhizosphereMSIFNRRNALLGWGVWQVTKIVARRKAKQAVPGTGEHAGLNKGAIAGIGAATVAAVLFWRKKSEESSSPVS
Ga0207681_1047897823300025923Switchgrass RhizosphereMGIVNRRNALLGWGVWKLAKEFGRQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR
Ga0207700_1016370623300025928Corn, Switchgrass And Miscanthus RhizosphereMGVVNRRNAMLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDEPDSGS
Ga0207664_1108077723300025929Agricultural SoilMGVVNRRNAMLGWAVWKVTKAFGKQKAKEAVPGSGEYAGLNKGALAAIGAATLAALLFWRKKTDAPDIGS
Ga0207711_1026526723300025941Switchgrass RhizosphereMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFWHKKSDESTSGS
Ga0207703_1229689713300026035Switchgrass RhizosphereSHLGRLAHERRPMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAVGGALWIWRKKSDETPGR
Ga0207683_1127130113300026121Miscanthus RhizosphereMGIINRRNAVLGWAVWQVVKQYVKQQARAAVPGPGGHAGLNKGAIASMLAAAAGLLWFWHKKSDESTTGS
Ga0209155_100015213300026316SoilGWSVWQIAKATSKRKAKQAVPGKGDHAGLNKGAVAGLGAATVAALLFWRKKSDGSFTSGS
Ga0209811_1004669713300027821Surface SoilMGIVNRRNALLGWGVWKMAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGS
Ga0209811_1005893723300027821Surface SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETPGT
Ga0209811_1034912613300027821Surface SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGTGDHAGLNKGALASIAAAAGGALWIWRKKSDETRGT
Ga0207428_1095240723300027907Populus RhizosphereMSIINRRNAVLGWGVWQVAKVASKRKAKQAVPGKGEHAGLNKGAIAGVGAATLAALLFWRKKSDGSLSSGS
Ga0307307_1017980213300028718SoilMGIVNRRNAVLGWGVWKLAKEYGKQKAKAAVPGRGDHAGLNKGALASMAAALGGAL
Ga0307316_1035912813300028755SoilMGIINRRNAVLGWGVWQVVKQYGKQQARKAVPGTGGHAGLNKGAIVSMLAAGAGVLWFW
Ga0307299_1011092923300028793SoilMGIVNRRNAVLGWGVWKLAKEYGKQKAKAAVPGTGDHAGLNKGALASMAAALGAALWIWRKKSDETSGT
Ga0307503_1043181423300028802SoilMGIINRRNAVFGWAVWQAVKQYVKQRARAAVPGPGGHAGLNKGAIASMLAVGAGLFWFWHKKSDESTSGS
Ga0307296_1011162623300028819SoilMGIVNRRNAVLGWGVWKLAKEYGKQKAKAAVPGTGDHAGLNKGALASMAAALGGAL
Ga0308155_102418623300030987SoilMGIVNRRNAVLGWGVWKLAKEFGKQKAKAAVPGTGDHAGLNKSALASMVAAVGGALWIWRKKSDETPGT
Ga0308201_1023644013300031091SoilAHERRPMGIVNRRNAVLGWGVWKLAKAFGKQKAKEAVPGTGDHAGLNKGALASMVAAVGGALWIWRKKSDETPGT
Ga0307499_1029718223300031184SoilMGIVNRRNALLGWGVWKVTKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETRGT
Ga0307497_1000433433300031226SoilMGIVNRRNALLGWGVWKLAKEFGKQKAKEAVPGPGDHAGLNKGALASIAAAAGGALWIWRKKSDETSGT
Ga0308176_1211013823300031996SoilMGIINRRNAMLGWAVWKVTKAFGKQKAKEAVPGPGGYAGLNKGALATIGAATLAALLFWRKKTDAPNSGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.