Metagenome / Metatranscriptome Family F064945

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064945
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	109 residues
Representative Sequence	MQLPTDRKITESHARFDDAAQMAIFLASIPDADDLAALLLERRVVSTRTFDDDAMIARFVRSNGTVVACYTVEAVTIDEAEMIAAQCELLEDWNVESFSRAVHVALDPDL
Number of Associated Samples	87
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.44 %
% of genes near scaffold ends (potentially truncated)	23.44 %
% of genes from short scaffolds (< 2000 bps)	69.53 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.406 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.906 % of family members)
Environment Ontology (ENVO)	Unclassified (41.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.688 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.43% β-sheet: 20.29% Coil/Unstructured: 49.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d4he8n_	4he8	0.58387
d.109.3.1: FLJ32549 C-terminal domain-like	d2gnxa2	2gnx	0.55214
d.89.1.0: automated matches	d3l57a_	3l57	0.54786
e.3.1.1: beta-Lactamase/D-ala carboxypeptidase	d2fffb1	2fff	0.54714
e.3.1.0: automated matches	d4ztka_	4ztk	0.5469

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF12840	HTH_20	5.47
PF01177	Asp_Glu_race	5.47
PF10932	DUF2783	3.91
PF01979	Amidohydro_1	3.12
PF08327	AHSA1	3.12
PF12972	NAGLU_C	3.12
PF01902	Diphthami_syn_2	3.12
PF12704	MacB_PCD	2.34
PF02687	FtsX	1.56
PF01425	Amidase	1.56
PF06831	H2TH	1.56
PF13532	2OG-FeII_Oxy_2	1.56
PF13432	TPR_16	1.56
PF13419	HAD_2	0.78
PF07883	Cupin_2	0.78
PF02738	MoCoBD_1	0.78
PF10118	Metal_hydrol	0.78
PF14329	DUF4386	0.78
PF01799	Fer2_2	0.78
PF12849	PBP_like_2	0.78
PF06762	LMF1	0.78
PF13468	Glyoxalase_3	0.78
PF02803	Thiolase_C	0.78
PF00248	Aldo_ket_red	0.78
PF17201	Cache_3-Cache_2	0.78
PF00111	Fer2	0.78
PF02698	DUF218	0.78
PF04226	Transgly_assoc	0.78
PF08837	DUF1810	0.78
PF04542	Sigma70_r2	0.78
PF00440	TetR_N	0.78
PF01145	Band_7	0.78
PF04993	TfoX_N	0.78
PF03976	PPK2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2102	Diphthamide synthase (EF-2-diphthine--ammonia ligase)	Translation, ribosomal structure and biogenesis [J]	3.12
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.56
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	1.56
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.78
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.78
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.41 %
Unclassified	root	N/A	33.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.41 %
Unclassified	root	N/A	33.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.41 %
Unclassified	root	N/A	33.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.84 %
Unclassified	root	N/A	33.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.56 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.56 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.56 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	0.78 %
Kiloniellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	1.56 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.56 %
Aestuariispira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Aestuariispira	0.78 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	0.78 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
Herbaspirillum chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum chlorophenolicum	1.56 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.56 %
Aestuariispira insulae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Aestuariispira → Aestuariispira insulae	0.78 %
Syntrophorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	0.78 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
Herbaspirillum chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum chlorophenolicum	1.56 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.56 %
unclassified Syntrophorhabdus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus	0.78 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.78 %
Aestuariispira insulae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Aestuariispira → Aestuariispira insulae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.34 %
Herbaspirillum chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum chlorophenolicum	1.56 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.56 %
Syntrophorhabdus sp. PtaU1.Bin058	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaU1.Bin058	0.78 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.78 %
Aestuariispira insulae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Aestuariispira → Aestuariispira insulae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908007\|FWIRElOz_GKZ9IRQ01BIUR1	Not Available	513	Open in IMG/M
3300001593\|JGI12635J15846_10288788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1032	Open in IMG/M
3300001661\|JGI12053J15887_10032568	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300001867\|JGI12627J18819_10054999	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300002245\|JGIcombinedJ26739_100114386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2537	Open in IMG/M
3300002245\|JGIcombinedJ26739_101183398	Not Available	653	Open in IMG/M
3300003505\|JGIcombinedJ51221_10281984	Not Available	676	Open in IMG/M
3300004080\|Ga0062385_10749552	Not Available	634	Open in IMG/M
3300004082\|Ga0062384_100176356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1238	Open in IMG/M
3300004082\|Ga0062384_100437004	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300004092\|Ga0062389_100163146	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300004092\|Ga0062389_102582497	Not Available	675	Open in IMG/M
3300004635\|Ga0062388_101465186	Not Available	688	Open in IMG/M
3300005591\|Ga0070761_10768245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300005602\|Ga0070762_10014508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4019	Open in IMG/M
3300005602\|Ga0070762_10044057	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300005607\|Ga0070740_10243225	Not Available	737	Open in IMG/M
3300005610\|Ga0070763_10716079	Not Available	587	Open in IMG/M
3300006059\|Ga0075017_101105103	Not Available	619	Open in IMG/M
3300006176\|Ga0070765_100043522	All Organisms → cellular organisms → Bacteria	3612	Open in IMG/M
3300006893\|Ga0073928_11231542	Not Available	503	Open in IMG/M
3300009633\|Ga0116129_1024234	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300011271\|Ga0137393_10625373	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300014501\|Ga0182024_10391790	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300014501\|Ga0182024_10468972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1609	Open in IMG/M
3300014501\|Ga0182024_11061562	Not Available	960	Open in IMG/M
3300015160\|Ga0167642_1010605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1618	Open in IMG/M
3300015206\|Ga0167644_1047826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1555	Open in IMG/M
3300020021\|Ga0193726_1000014	All Organisms → cellular organisms → Bacteria → Proteobacteria	573562	Open in IMG/M
3300020021\|Ga0193726_1008031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5919	Open in IMG/M
3300020034\|Ga0193753_10259008	Not Available	769	Open in IMG/M
3300020580\|Ga0210403_10447016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1053	Open in IMG/M
3300020580\|Ga0210403_10489904	Not Available	999	Open in IMG/M
3300020581\|Ga0210399_10184277	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300020582\|Ga0210395_10124727	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300020583\|Ga0210401_10077585	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300020583\|Ga0210401_11563469	Not Available	517	Open in IMG/M
3300021168\|Ga0210406_10024694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5530	Open in IMG/M
3300021168\|Ga0210406_10100125	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300021168\|Ga0210406_10611693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021168\|Ga0210406_11392031	Not Available	501	Open in IMG/M
3300021170\|Ga0210400_10486919	Not Available	1018	Open in IMG/M
3300021180\|Ga0210396_10186511	Not Available	1856	Open in IMG/M
3300021180\|Ga0210396_10237383	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300021180\|Ga0210396_11292893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300021181\|Ga0210388_10024881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4877	Open in IMG/M
3300021181\|Ga0210388_11200145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	644	Open in IMG/M
3300021401\|Ga0210393_10064471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2887	Open in IMG/M
3300021403\|Ga0210397_10616457	Not Available	830	Open in IMG/M
3300021403\|Ga0210397_10908135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaU1.Bin058	682	Open in IMG/M
3300021403\|Ga0210397_11128346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Aestuariispira → Aestuariispira insulae	609	Open in IMG/M
3300021404\|Ga0210389_10023445	All Organisms → cellular organisms → Bacteria → Proteobacteria	4769	Open in IMG/M
3300021404\|Ga0210389_10032337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4023	Open in IMG/M
3300021404\|Ga0210389_10477615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	981	Open in IMG/M
3300021404\|Ga0210389_10592025	Not Available	872	Open in IMG/M
3300021405\|Ga0210387_10468833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1118	Open in IMG/M
3300021407\|Ga0210383_10114387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2277	Open in IMG/M
3300021407\|Ga0210383_11480285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	562	Open in IMG/M
3300021407\|Ga0210383_11726639	Not Available	512	Open in IMG/M
3300021432\|Ga0210384_10013235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8234	Open in IMG/M
3300021474\|Ga0210390_11607682	Not Available	511	Open in IMG/M
3300021475\|Ga0210392_10118171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1771	Open in IMG/M
3300021475\|Ga0210392_10166888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300021475\|Ga0210392_10172605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300021475\|Ga0210392_10596262	Not Available	819	Open in IMG/M
3300021475\|Ga0210392_10749920	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300021478\|Ga0210402_10028034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4857	Open in IMG/M
3300021479\|Ga0210410_10205103	Not Available	1766	Open in IMG/M
3300023259\|Ga0224551_1009051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1660	Open in IMG/M
3300024271\|Ga0224564_1055663	Not Available	775	Open in IMG/M
3300025463\|Ga0208193_1016859	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300025627\|Ga0208220_1084205	Not Available	875	Open in IMG/M
3300025633\|Ga0208480_1001360	All Organisms → cellular organisms → Bacteria → Proteobacteria	8803	Open in IMG/M
3300025664\|Ga0208849_1140133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300026304\|Ga0209240_1090423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	1113	Open in IMG/M
3300026304\|Ga0209240_1280915	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300026557\|Ga0179587_10206457	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300026557\|Ga0179587_10841214	Not Available	605	Open in IMG/M
3300027002\|Ga0209110_1027605	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027030\|Ga0208240_1044827	Not Available	500	Open in IMG/M
3300027031\|Ga0208986_1028887	Not Available	591	Open in IMG/M
3300027330\|Ga0207777_1056333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum chlorophenolicum	693	Open in IMG/M
3300027496\|Ga0208987_1014039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1341	Open in IMG/M
3300027496\|Ga0208987_1037843	Not Available	856	Open in IMG/M
3300027504\|Ga0209114_1037903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	827	Open in IMG/M
3300027505\|Ga0209218_1065576	Not Available	743	Open in IMG/M
3300027516\|Ga0207761_1058979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → Herbaspirillum chlorophenolicum	745	Open in IMG/M
3300027517\|Ga0209113_1000803	All Organisms → cellular organisms → Bacteria	3735	Open in IMG/M
3300027528\|Ga0208985_1019222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1314	Open in IMG/M
3300027528\|Ga0208985_1108459	Not Available	531	Open in IMG/M
3300027545\|Ga0209008_1020704	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300027559\|Ga0209222_1099165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	563	Open in IMG/M
3300027574\|Ga0208982_1003890	All Organisms → cellular organisms → Bacteria	3049	Open in IMG/M
3300027609\|Ga0209221_1008301	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300027692\|Ga0209530_1067321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1035	Open in IMG/M
3300027826\|Ga0209060_10409356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300027855\|Ga0209693_10036120	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300027879\|Ga0209169_10055646	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300027884\|Ga0209275_10018721	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300027895\|Ga0209624_10407806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5	906	Open in IMG/M
3300027895\|Ga0209624_11067359	Not Available	521	Open in IMG/M
3300028014\|Ga0265345_101752	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300028016\|Ga0265354_1000664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5712	Open in IMG/M
3300028023\|Ga0265357_1000301	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300028036\|Ga0265355_1021097	Not Available	564	Open in IMG/M
3300028047\|Ga0209526_10027019	All Organisms → cellular organisms → Bacteria → Proteobacteria	4026	Open in IMG/M
3300028731\|Ga0302301_1185206	Not Available	508	Open in IMG/M
3300029944\|Ga0311352_10039676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4370	Open in IMG/M
3300030759\|Ga0265745_1019701	Not Available	582	Open in IMG/M
3300030814\|Ga0265741_107748	Not Available	722	Open in IMG/M
3300030815\|Ga0265746_1029948	Not Available	696	Open in IMG/M
3300031057\|Ga0170834_107557834	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300031057\|Ga0170834_110065824	Not Available	522	Open in IMG/M
3300031057\|Ga0170834_113009214	Not Available	820	Open in IMG/M
3300031128\|Ga0170823_13635316	Not Available	816	Open in IMG/M
3300031474\|Ga0170818_104674934	Not Available	941	Open in IMG/M
3300031708\|Ga0310686_103338397	All Organisms → cellular organisms → Bacteria	10033	Open in IMG/M
3300031708\|Ga0310686_103593814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3078	Open in IMG/M
3300031708\|Ga0310686_107125222	All Organisms → cellular organisms → Bacteria → Proteobacteria	4834	Open in IMG/M
3300031708\|Ga0310686_115127011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7824	Open in IMG/M
3300031708\|Ga0310686_117227579	All Organisms → cellular organisms → Bacteria → Proteobacteria	20267	Open in IMG/M
3300031715\|Ga0307476_10002336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11343	Open in IMG/M
3300031715\|Ga0307476_10747298	Not Available	724	Open in IMG/M
3300031715\|Ga0307476_11146769	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300031718\|Ga0307474_10001710	All Organisms → cellular organisms → Bacteria → Proteobacteria	15891	Open in IMG/M
3300031718\|Ga0307474_10076437	All Organisms → cellular organisms → Bacteria	2487	Open in IMG/M
3300031718\|Ga0307474_10165906	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300032001\|Ga0306922_11791109	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.66%
Host-Associated	Host-Associated	2.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.84%
Aquatic	Environmental → Aquatic	7.81%
Plants	Host-Associated → Plants	2.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.72%
Freshwater	Environmental → Aquatic → Freshwater	6.25%
Peat	Environmental → Terrestrial → Peat	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.81%
Loam	Environmental → Terrestrial → Soil → Loam	26.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.56%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908007	Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028014	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRElOz_01099570	2124908007	Soil	MSLFHVDSEPPSAAVEITETRAKLDDAGQMAAFLAPIPNADKLALLLPKKKVVSTRAYEDEAMAARFVRCNGETVTCYTVREVTIDESEMIAAQCELLDDWSAESFTRAVHLALDPDPVPPPEAH
JGI12635J15846_102887882	3300001593	Forest Soil	MQLPSDRKITESHARFEDAVQMAVFLAAIPDADALAALLMERKVVSTRTFDDDAMTARFVRSNGTAVACYTVEAVTIDEAEMIAAQCELLDDWNIESFSRAVHVALDPDL*
JGI12053J15887_100325683	3300001661	Forest Soil	MDCKITASHANIDDAAQMAEFLARLPNSDGLKALLEHRKAVSTRDYEDDEMSALFVRSDGTTVVCYKVDGVTIDEGEMIAAQCELLDVWNLESFSRAVHIALDPGIDAIE*
JGI12627J18819_100549992	3300001867	Forest Soil	MDHKISATHANLNDAAQMSVFLDGMPNAADLQTLLMKMQVVSTRDYEDDEMTALFVRSNGTTVACYRVEGVTIDESEMIAAQCELLDEWNPDSFSRAVHIALDPGVTSA*
JGIcombinedJ26739_1001143862	3300002245	Forest Soil	MDLPSNRKITESRASFDDAAQMAVFLASIPDADDLATLLMGRKVVSTRTFDDDAMLARFVRSNGATVVCYTVETVTIDEAEMIAAQCELLDDWNVESFSKAVHVALDPDL*
JGIcombinedJ26739_1011833982	3300002245	Forest Soil	MDQDHEIIATNARLDDAAQMALFLAPIPNASSLEALLRERKVVSTRTYDDDEMLARFVRSDGTMVACYTVKEVTIDEGEMIAAQCELLDIWSLESFSRAVHVALDPEI*
JGIcombinedJ51221_102819842	3300003505	Forest Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELL
Ga0062385_107495522	3300004080	Bog Forest Soil	MQLPTDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTTVACYAVEAITIDEAEMIAAQCELLEDWNVENFSRAVHVALDPELKEPV*VFPVAAEYSDRLLDNLDA
Ga0062384_1001763562	3300004082	Bog Forest Soil	RQITESHARFDDAAQMAVFLAAIPDADDLAALLMDRKVVSTRTFDDDAMTARFVRSNGATVACYTVKTVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL*
Ga0062384_1004370042	3300004082	Bog Forest Soil	MDHKITACHAKLSDAAAMAAFLEGMPNATDLETLLIKMEVVSTRDYEDEEMTALFVRSDGTTVACYRVEGVTIDESEMIAAQCELLEVWDVESFSRAVHLALDPGIQGSST*
Ga0062389_1001631462	3300004092	Bog Forest Soil	MLLPSDRQITESHARFDDAAQMAVFLAAIPDADDLAALLMDRKVVSTRTFDDDAMTARFVRSNGATVACYTVKTVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL*
Ga0062389_1025824972	3300004092	Bog Forest Soil	MTLPSDRRITESHARFDDAAAMAVFLASIPDADELAALLMGRKVVSTRTFDDDKMIARFVRSNGTKVACYTVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDP
Ga0062388_1014651861	3300004635	Bog Forest Soil	MQLPTDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTTVACYAVEAITIDEAEMIAAQCELLEDWNVENFSRAVHVALDPELKEPV*VFPVAAEYSDRLLDNLDAAGRDAKFSCHQKRSYRGV
Ga0070761_107682451	3300005591	Soil	MQLPTNRKITESHARFADAAQMAIFLASIPDADDLAALLLERRVVSTRTFDDDAMIARFVRSNGTVVACYTVEAVTIDEAEMIAAQCELLEDWNVESFSRAVHVALDPDL*
Ga0070762_100145083	3300005602	Soil	MPLSSDHKITESHARFDDAAEMAIFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL*
Ga0070762_100440572	3300005602	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL*
Ga0070740_102432252	3300005607	Surface Soil	MDPRIKEAHARLDDEAAMAAFLAPIPNAEGLAALLKERRVLSTRAYDDEAMVARFVRSNGETVACYTVADVTIDEGEMIAAQCELLTDWNIESFSKAVHLALDVDADAADDSITATT*
Ga0070763_107160792	3300005610	Soil	MPLSSDHKITESHAKFDDAAEMAIFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL*
Ga0075017_1011051031	3300006059	Watersheds	MDRKIIESHAILADQAQMGVFLAPIPNADSLEALLMERRVVSTRTYEDDAMIARFVRSNGTTVACYTVEDVTIDEAEMIAAQCELLDDWNVENFSRAVHAALDPDL*
Ga0070765_1000435222	3300006176	Soil	MQLPTDRKITESHARFDDAAQMAIFLASIPDADDLAALLLERRVVSTRTFDDDAMIARFVRSNGTVVACYTVEAVTIDEAEMIAAQCELLEDWNVESFSRAVHVALDPDL*
Ga0073928_112315422	3300006893	Iron-Sulfur Acid Spring	MSLFHVDEEPPSAAVDITETHAILDDAVQMAAFLAPIPNADKLELLLQERKAVSTRAYEDEAMAARFVRSNGASVACYTVREVTIDESEMIAAQCELL
Ga0116129_10242343	3300009633	Peatland	MEFPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAESFSNAVHVALDPDL*
Ga0137393_106253732	3300011271	Vadose Zone Soil	MDRRITASHAKIDDAAQMALFLECIPNSGDLEALLMERKAVSTRNYDDDAMVARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDAWSLEDFSGAVHVALDPGPLGL*
Ga0182024_103917902	3300014501	Permafrost	MQLPTDRKITESHAKFADPEQMTAFLASIPDADGLQVLLMKRKIVSTRTFDDDAMIARFVRSDGTTVVCYTVEAVTIDEAEMIAAQCELLDDWNVETFSRAVHIALDPEL*
Ga0182024_104689722	3300014501	Permafrost	MENPHGIGILAPMQIPTDRKITESRAKFDDAAQMAIFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSDGATVVCYTVEAVTIDEAEMIAAQCELLDDWNVESFSNAVHVALDPDP*
Ga0182024_110615622	3300014501	Permafrost	MQFPPDRKITESHAKFDDAPQMAIFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSNGITVTCYTVEAVTIDEAEMIAAQCELLDDWNVESFSNAVHVALDPEL*
Ga0167642_10106052	3300015160	Glacier Forefield Soil	MQLPTDRKITESHAKFADAAQMAAFLASIPDADGLEALLMKRKIVSTRTFDDDAMIARFVRSDGTSVACYTVEAVTIDEAEMIAAQCELLDDWNIESFSRAVHVALDPDL*
Ga0167644_10478262	3300015206	Glacier Forefield Soil	MQLPTDRKITESHAQFADAAQMAAFLASIPDADGLQALLMKRKIVSTRTFDDDAMIARFVRSDGTSVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL*
Ga0193726_1000014287	3300020021	Soil	MQIPTDRKITESHAQFADAAQMAAFLASIPDADGLQSLLMKRKIVSTRTFDDDAMIARFVRSDGSSVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL
Ga0193726_10080314	3300020021	Soil	MDCKITASHANIDDAAQMAEFLARLPNSDGLKALLEHRKAVSTRDYEDDEMSALFVRSDGTTVVCYKVDGVTIDEGEMIAAQCELLDVWNLESFSRAVHIALDPGIDAIE
Ga0193753_102590082	3300020034	Soil	MQLPTDRKITESHAKFADAAQMAAFLASIPDADGLEALLMKRKIVSTRTFDDDAMIARFVRSDGTSVACYTVEAVTIDEAEMIAAQCELLD
Ga0210403_104470162	3300020580	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVICYSVQGLTIDEAEMIAAQCEILSEWDVDSFSQAVHTALDPDI
Ga0210403_104899042	3300020580	Soil	MDRKITASHAKIDDAAQMALFLERIPNSGDLEALLMERKAVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDAWSLEDFSGAVRVALDPEV
Ga0210399_101842772	3300020581	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMIAAQCEILSEWDVDSFSQAVHIALDPDI
Ga0210395_101247272	3300020582	Soil	MPLSSDHKITESHAKFDDAAEMAIFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL
Ga0210401_100775852	3300020583	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSDGTEVVCYSVQGLTIDEAEMIAAQCEMLGEWDVDSFSQAVHIALDADI
Ga0210401_115634691	3300020583	Soil	MDRKITASHAEIDDAAQMALFLERIPNSGDLDALLMERRVVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDVWSLENFSAAVHVALDPEV
Ga0210406_100246942	3300021168	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMVAAQCEMLGEWDLDSFTRAVHIALDPDI
Ga0210406_101001253	3300021168	Soil	MDRKISESRAKLDDVAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMIAAQCEILSEWDVDSFSQAVHIALDPDV
Ga0210406_106116932	3300021168	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMIAAQCEMLGEWDVDSFSQAVHIALDPEI
Ga0210406_113920311	3300021168	Soil	MQLPTDRKITESHANLADAAQMAAFLAPIPDGDGLQALLMKRKIVSTRTFDDDAMIARFVRSTGTTVACYTVEAVTIDDAEMIAAQCELLDEWNIETFSRAVHVALDPEL
Ga0210400_104869191	3300021170	Soil	MPLSSDHKITESHAKFDDAAEMAVFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL
Ga0210396_101865113	3300021180	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0210396_102373832	3300021180	Soil	RKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSDGTEVVCYSVQGLTIDEAEMIAAQCEMLGEWDVDSFSQAVHIALDADI
Ga0210396_112928932	3300021180	Soil	MDRKISESRAKLDDIAQRTLFLAPLPDADDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMIAAQCEMLSEWDVDSFSQAVHIALDPDI
Ga0210388_100248812	3300021181	Soil	MQLPTDRKITESHAQFADAAQMAAFLASIPDADGLQALLMKRKIVSTRTFDDDAMIARFVRSNGTTVVCYTVEAVTIDEAEMITAQCELLDDWNIEAFSHAVHVALDSDPE
Ga0210388_112001452	3300021181	Soil	MQPPTDRKITESHAELADAAKMAAFFASIPDADGLEALLMKRRVVSTRTFDDDAMIARFVRSNGTTVVCYTVEAVTIDEAEMITAQCELLDDWNVETFSRAVHIALDSDPE
Ga0210393_100644711	3300021401	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAE
Ga0210397_106164572	3300021403	Soil	MDCKITASRAKIDDAAQMAAFLAPLPNSDGLKTLLEHRKVVSTRDYEDEEMSALFVRSDGILVVCYKVEGVTIDEGEMIAAQCELLDDWNLESFSRAVHIALDPGIDAIE
Ga0210397_109081351	3300021403	Soil	DHKITESHAKFDDAAEMAIFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL
Ga0210397_111283462	3300021403	Soil	MDHKIFASQASLSDAAQMAVFLDGMPNAADLEKLLMKMKVVSTRDYEDDDMTALFVRSNGTTVACYRVEGVTIDESEMIAAQCELLDDWNVENFSRAVHVALDPGPE
Ga0210389_100234451	3300021404	Soil	MNHKIVALHADLNDASQMTAFLDGMPNAADLEALLMKRKVVSTRDYEDDEMTALFVRSNGRIVACYRVEGVTIDESEMIAAQCELLDDWNVESFSRAVHVALDPVI
Ga0210389_100323377	3300021404	Soil	MQLPTDRKVTESHAKFADAAQMTAFLASIPDADGLQALLMKRKTVSTRTFDDDAMVARFVRSNGATVACYTVEAVTIDEAEMIAAQCELLDEWNLENFSRAVHVALDPDL
Ga0210389_104776152	3300021404	Soil	MQLPTDRKITESHANLADAAQMAAFLAPIPDADGLQALLMKRKIVSTRTFDDDAMIARFVRSTGTTVACYTVEAVTIDDAEMIAAQCELLDEWNIETFSRAVHVALDPDL
Ga0210389_105920251	3300021404	Soil	MDRKITASHAEIDDAAQMALFLERIPNSGDLDALLMKRRVVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDQGEMIAAQCELLDVWSLENFSAAVHVALDPGV
Ga0210387_104688332	3300021405	Soil	MQLPTDRKITESHAQFADAAQMAAFFASIPDADGLQALLMKRKIVSTRTFEDDAMIARFVRSDGTSVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL
Ga0210383_101143872	3300021407	Soil	MQLPSDRRITEAHAKFDDAAQMAVFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSNGTTVACYTVESVTIDEAEMIAAQCELLDDWSVESFSRAVHVALDPD
Ga0210383_114802852	3300021407	Soil	MQPPTDRKITESHAELADAAKMAAFFASIPDADGLEALLVKRRVVSTRTFDDDAMIARFVRSNGTTVVCYTVEAVTIDEAEMITAQCELLDDWNVETFSRAVHIALDSDPE
Ga0210383_117266391	3300021407	Soil	RKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0210384_100132353	3300021432	Soil	MDRKITASQAEIDDAAQMASFLQRIPNSGDLDALLMERRVVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDVWSLENFSAAVHVALDPGV
Ga0210390_116076821	3300021474	Soil	MQLPTDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTGVACYTVEAITIDEAEMIAAQCELLEDWNIESFSRAVHVALDPDL
Ga0210392_101181711	3300021475	Soil	MDCKITASRAKIDDAAQMAAFLAPLPNSDGLKTLLEHRKVVSTRDYEDEEMSALFVRSDGILVVCYKVEGVTIDEGEMIAAQCELLDDWNLESFSRAVHIALDPGMDAIE
Ga0210392_101668882	3300021475	Soil	MDMDHKIAASQAKIDDAAQMAQFLAPIPNAGNLQALLMERKVVSTRSYDDDTMIARFVRSDGKTVVCYAVEEITIDEGEMIAAQCELLKVWNLEDFSRAVHIALDPEI
Ga0210392_101726052	3300021475	Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMIAAQCEMLGEWDVDSFSQAVHIALDPDI
Ga0210392_105962622	3300021475	Soil	MDCQITASHAEIADAAQMAEFLARLPNSDGLKALLEERKVVSTRDYEDEEMSALFVRSDGTTVVCYKVDGVTIDEGEMIAAQCELLDHWNLENFSRAVHIALDPGIDPVA
Ga0210392_107499201	3300021475	Soil	MSLFHVDPEPPSAAVKITESHARLDDAGQMAAFLAPIPNADKLALLLNEKKVVSTRAYEDEAMAARFVRCNGETVACYTVREVTIDESEMIAAQCELLDDWNAESFTRAVHLALDPDPV
Ga0210402_100280343	3300021478	Soil	MDRKISASHAKIDDARQMALFLEQIPNAGNLEALLKERRVVSTRNYDDDAMTARFVRSDGTSVACYTVEEVTIDEGEMIAAQCELLEAWNLENFSSAVHIALDPDL
Ga0210410_102051032	3300021479	Soil	MDRKITASHAEIDDAAQMALFLERIPNSGDLDALLMKRRVVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDVWSLENFSAAVHVALDPEV
Ga0224551_10090513	3300023259	Soil	MQFPPDRKITESHAKFDDAPQMAIFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSNGITVTCYTVEAVTIDEAEMIAAQCELLDDWNVESFSNAVHVALDPEL
Ga0224564_10556632	3300024271	Soil	MQLPIDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTTVACYTVEAITIDEAEMIAAQCELL
Ga0208193_10168592	3300025463	Peatland	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAESFSNAVHVALDPDL
Ga0208220_10842051	3300025627	Arctic Peat Soil	MQFPTDRKITESHAKFADAAQMAAFLASIPDADGLAALLIERRVVSTRTFDDDTMVARFVRSNGTTVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSSAVHLALDPDL
Ga0208480_10013605	3300025633	Arctic Peat Soil	MQLPTDRKITESHAKFDDAAQMAIFLASIPDADGLAALLMERRVVSTRTFDDDTMIARFVRSNGTAVACYAVEAVTIDEAEMIAAQCELLDDWNVESFSNAVHVALDPEL
Ga0208849_11401331	3300025664	Arctic Peat Soil	QRLTVVMENPHDIGILAPMQLPTYRKITESHAKFADAAQMAAFLASIPDADGLAALLIERRVVSTRTFDDDTMVARFVRSNGTTVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSSAVHLALDPDL
Ga0209240_10904231	3300026304	Grasslands Soil	GCASAATDDGAFMDRKITASHAKLDDAAQMALFLERIPNSGDLEALLMERKVVSTRNYDDDAMVARYVRSNGTSVACYAVEDVTIDEGEMIAAQCELLDAWNLENFSSAVHVALDPEV
Ga0209240_12809151	3300026304	Grasslands Soil	KITASHAKIDDAAQMALFLERIPNPGDLEALLMERKAVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDAWNLENFSGAVRVALDPQV
Ga0179587_102064572	3300026557	Vadose Zone Soil	MDRKITASHAKIDDAAQMALFLERIPNPGDLEALLMERKAVSTRNYDDDAMIARFVRSNGTTVACYTVEDVTIDEGEMIAAQCELLDAWNLENFSGAVRVALDPQV
Ga0179587_108412141	3300026557	Vadose Zone Soil	MDQDHEIIATNARLDDAAQMALFLVPIPNAGGLEALLMERKVVSTRTYDDDEMLARFVRSDGKMVACYTVKEVTIDEAEMIAAQCELLDVWNLESFSRAVHIALDPEI
Ga0209110_10276052	3300027002	Forest Soil	MDHKISATHANLNDAAQMSVFLDGMPNAADLQTLLMKMQVVSTRDYEDDEMTALFVRSNGTTVACYRVEGVTIDESEMIAAQCELLDEWNPDSFSRAVHIALDPGVTSA
Ga0208240_10448271	3300027030	Forest Soil	MQLPTDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTSVACYTVEAITIDEAEMIAAQCELLEDWNVENFS
Ga0208986_10288871	3300027031	Forest Soil	MDCKITASHANIDDAAQMAEFLARLPNSDGLKTLLEHRKVVSTRDYEDDEMSALFVRSDGTTVVCYKVEGVTIDEGEMIAAQCELLDAWNLESFSRAVHIALDPGFDAIE
Ga0207777_10563332	3300027330	Tropical Forest Soil	MDRKIIESHAKIDDDSQMGVFLAPIPNADNLEALLMERQAVSTRTYDDDAMTARFVRSNGITVVCYTVEDVTIDEGEMIAAQCELLDDWSVESFSQAVHA
Ga0208987_10140392	3300027496	Forest Soil	MQIPTDRKITESHAQFADAAQMAAFLASIPDADGLQSLLMKRKIVSTRTFDDDAMIARFVRSDGSSVACYAVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL
Ga0208987_10378431	3300027496	Forest Soil	MQLPTDRKITESHAKFADAAQMAAFLASIPDADGLQALLMKRKIVSTRTFDDDAMIARFVRSNGIAVTCYTVEAVTIDEAEMIAAQCELLDEWNTETFSRAVHVALDPEL
Ga0209114_10379032	3300027504	Forest Soil	MQLPTDRKITESHAKFADAGQMAAFLASIPDADGLEALLMKRKIVSTRTFEDDAMIARFVRSDGDTVTCYTVEAVTIDEAEMIAAQCELLHDWNVESFSQAVHIALDPEP
Ga0209218_10655762	3300027505	Forest Soil	MQLPTDRKITESHAQFADAAQMAAFLASIPDADGLQALLMKRKIVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0207761_10589791	3300027516	Tropical Forest Soil	MDRKIIESHAKIDDDSQMGVFLAPIPNADNLEALLMERQAVSTRTYDDDAMTARFVRSNGITVVCYTVEDVTIDEGEMIAAQCELLDDWSVESFSQ
Ga0209113_10008031	3300027517	Forest Soil	AQMSVFLDGMPNAADLQTLLMKMQVVSTRDYEDDEMTALFVRSNGTTVACYRVEGVTIDESEMIAAQCELLDEWNPDSFSRAVHIALDPGVTSA
Ga0208985_10192222	3300027528	Forest Soil	TDRKITESHAQFADAAQMAAFLASIPDADGLQSLLMKRKIVSTRTFDDDAMIARFVRSDGSSVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL
Ga0208985_11084591	3300027528	Forest Soil	MDCKITASRASIEDAAQMTEFLARLPNSDGLKTLLEHRRVVSTRDYEDEEMSALFVRSDGATVVCYKVDGVTIDESEMIAAQCELLEHWNLENFSRAVHIALDPGNDPIE
Ga0209008_10207041	3300027545	Forest Soil	LTDSIDGLTRPAPAGKSARPWYPLVMDLPSNRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0209222_10991651	3300027559	Forest Soil	SIDGLTRPAPAGKSARPWYPLVMDLPSNRKITESRASFDDAAQMAVFLASIPDADDLATLLMGRKVVSTRTFDDDAMLARFVRSNGATVVCYTVEAVTIDEAEMIAAQCELLDDWNVESFSKAVHVALDPEL
Ga0208982_10038904	3300027574	Forest Soil	MDCKITASHANIDDAAQMAEFLARLPNSDGLKALLEHRKAVSTRDYEDDEMSALFVRSDGTTVVCYKVDGVTIDEGEMIAAQCELLDAWNLESFSRAVHIALDPGFDAIE
Ga0209221_10083014	3300027609	Forest Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFTNAVHVALDPDL
Ga0209530_10673212	3300027692	Forest Soil	MQLPSDRKITESHARFEDAVQMAVFLAAIPDADALAALLMERKVVSTRTFDDDAMTARFVRSNGTAVACYTVEAVTIDEAEMIAAQCELLDDWNIESFSRAVHVALDPDL
Ga0209060_104093562	3300027826	Surface Soil	MDHKIIASHARLDDAVQMAAFLTGMPNADDLETLLKNNGVVSTRDYEDEEMTALFVRSDGSTVACYRVEGVTIDESEMIAAQCELLDEWNVETFSHAVHVALDPGA
Ga0209693_100361203	3300027855	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL
Ga0209169_100556464	3300027879	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLD
Ga0209275_100187214	3300027884	Soil	MPLSSDHKITESHARFDDAAEMAIFLASIPDADGLAALLMQRRVVSTRTFDDDRMIARFVRSNGSLVACYAVEAVTIDEAEMIAAQCELLDDWNVENFSNAVHVALDPDL
Ga0209624_104078062	3300027895	Forest Soil	MDLPSNRKITESRASFDDAAQMAVFLASIPDADDLATLLMGRKVVSTRTFDDDAMLARFVRSNGATVVCYTVETVTIDEAEMIAAQCELLDDWNVESFSKAVHVALDPDL
Ga0209624_110673591	3300027895	Forest Soil	MDHKILTSQAVLTDAAQMAAFLDGMPNATDLEALLLKMKVVSTRDYEDDEMTALFVRSNGTLVACYRVEGVTIDESEMIAAQCELLDDWNLESFSRAVHIALDPGPE
Ga0265345_1017521	3300028014	Plant Litter	MDMDHKITASRADLHDSAQMAQFLAPIPNAGNLESLLMERKAVSTRSYDDDTMIARFVRSDGTAVVCYAVEEVTIDEGEMIAAQCELLDFWNLENFARAVHIALDPEI
Ga0265354_10006648	3300028016	Rhizosphere	MQLPTDHRITESQANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMMARFLRSNGTTVTCYTVEAITIDEAEMIAAQCELLEDWNVENFSRAVHVALDPDL
Ga0265357_10003013	3300028023	Rhizosphere	MQLPSDRRITEAHAKFDDAAQMEVFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSDGTSVACYTVESVTIDEAEMIAAQCELLDDWSVESFSSAVHIALDPDL
Ga0265355_10210971	3300028036	Rhizosphere	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAHLLMGRKVVSTRTFDDDAMIARFVRSNGATVTCYTVEAVTIDEAEMIAAQCELLDEWNAE
Ga0209526_100270195	3300028047	Forest Soil	MDQDHEIIATNARLDDAAQMALFLAPIPNASSLEALLRERKVVSTRTYDDDEMLARFVRSDGTMVACYTVKEVTIDEGEMIAAQCELLDIWSLESFSRAVHVALDPEI
Ga0302301_11852061	3300028731	Palsa	MQLPTDRKITESHARFDDAAQMAIFLASIPDADDLAALLLERRVVSTRTFDDDAMIARFVRSNGTVVACYTVEAVTIDEAEMIAAQCELLEDWNVESFSRAVHVALDPDL
Ga0311352_100396761	3300029944	Palsa	MQLPTDRKITESHARFDDAAQMAIFLASIPDADDLAALLLERRVVSTRTFDDDAMIARFVRSNGTVVACYTVEAVTIDEAEMIAAQCELLEDWNVESFSRAVHVALDP
Ga0265745_10197011	3300030759	Soil	KITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMVARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDP
Ga0265741_1077482	3300030814	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAHLLMGRKVVSTRTFDDDAMIARFVRSNGATVTCYTVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0265746_10299481	3300030815	Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAHLLMGRKVVSTRTFDDDAMIARFVRSNGATVTCYKVEAVTIDEAEMIAAQCELLDEWNAENFSNAVHVALDPDL
Ga0170834_1075578342	3300031057	Forest Soil	MDRKITASQAEIDDAAQMALFLERIPNSGDLEALLMQRKAVSTRNYDDDAMIARFVRSNGTTVACYTVEEVTIDEGEMIAAQCELLDVWNLEEFSGAVHVALDPEV
Ga0170834_1100658241	3300031057	Forest Soil	MDRKIEGSHARIDDAAQMAQFLERIPNSGDLEALLMERKVVSTRNYDDDAMIARFVRSNGTTVACYAVEAVTIDEGEMIAAQCELLEIWNLENFSSAVHAALDPEA
Ga0170834_1130092141	3300031057	Forest Soil	MSLFHVDPEPPSAAVKITESHARLDDAGQMAAFLAPIPNADKLALLLNEKKVVSTRAYEDEAMAARFVRCNGETVACYTVREVTIDESEMIAAQCELLDDWNAESFTRAVHLALDPDPILPPQAH
Ga0170823_136353161	3300031128	Forest Soil	MSLFHVDPEPPSAAVKITESHARLDDAGQMAAFLAPIPNADKLALLLNEKKKVVSTRAYEDEAMAARFVRCNGETVACYTVREVTIDESEMIAAQCELLDDWNAESFTRAVHLALDPDPILPPEAR
Ga0170818_1046749343	3300031474	Forest Soil	MSLFHVDPEPPSAAVEITETHARLDDAAQMAAFLAPIPNADKLALLLNEKKVVSTRAYEDEVMAARFVRCNGETVACYTVREVTIDESEMIAAQCELLDDWNAENFTRAVHLALDP
Ga0310686_10333839712	3300031708	Soil	MQILPTDRKITESHARFDDAAQMATFLACIPDADDLAALLMERRVVSTRTFDDDAMIARFVRSNGTSVACYAVEAVTIDEAEMIAAQCELLEDWNRENFSRAVHVALDPDL
Ga0310686_1035938142	3300031708	Soil	MQLPTDRKITESHANFADAAQMAIFLASIPDADNLAALLMERKVVSTRTFDDDAMIARFVRSNGATVACYTVEAVTIDEAEMIAAQCELLEHWNVESFSRAVHVALDPDL
Ga0310686_1071252224	3300031708	Soil	MELPSDRKITESHASFDDAAQMAIFLASIPDADDLAHLLMGRKVVSTRTFDDDAMIARFVRSNGATVTCYSVEAVTIDEAEMIAAQCELLDEWNAANFSNAVHVALDPDP
Ga0310686_1151270112	3300031708	Soil	MQLPIDHRITESHANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTTVACYTVEAITIDEAEMIAAQCELLEDWNMENFSRAVHVALDPDL
Ga0310686_1172275797	3300031708	Soil	MQLPSDRRITEAHAKFDDAAQMALFLASIPDADGLAALLMERRVVSTRTFDDDAMIARFVRSNGTAVACYTVDSVTIDEAEMIAAQCELLDDWSVESFSRAVHVALDPDL
Ga0307476_100023368	3300031715	Hardwood Forest Soil	MQLPTDHRITESRANFADAAQMAIFLASIPDADDLAALLMERRVVSTRTFDDDAMTARFVRSNGTSVACYTVEAITIDEAEMIAAQCELLEDWNVENFSRAVHVALDPDL
Ga0307476_107472981	3300031715	Hardwood Forest Soil	MDRKITASHAKIDDAAQMALFLEPIPNSGDLEALLLERRVVSTRNYDDDAMIARFVRSNGTTVACYTVEEVTIDEGEMIAAQCELLDVWNLENFSGAVHLALDPED
Ga0307476_111467691	3300031715	Hardwood Forest Soil	SPMDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSNGTEVVCYSVQGLTIDEAEMVAAQCEMLGEWDLDSFTRAVHIALDPDI
Ga0307474_1000171014	3300031718	Hardwood Forest Soil	MQLPTDRKITESHAQFADAAQMAAFFASIPDADGLQALLMKRKIVSTRTFDDDAMIARFVRSDGTSVACYTVEAVTIDEAEMIAAQCELLDDWNVESFSRAVHVALDPDL
Ga0307474_100764372	3300031718	Hardwood Forest Soil	MDRKISESRAKLDDAAQRALFLAPLPDAGDLESLLMERKVVSTRTYEDEAMIARFVRSDGTEVVCYSVQGLTIDEAEMIAAQCEMLGEWDVDSFSQAVHIALDPDI
Ga0307474_101659062	3300031718	Hardwood Forest Soil	MELPSDRKITESHASFDDAAQMAVFLASIPDADDLAALLMGRKVVSTRTFDDDAMIARFVRSNGATVTCYTVQAVTIDEAEMIAAQCELLDEWSAENFSNAVHVALDPDL
Ga0306922_117911091	3300032001	Soil	MDRKIIESHAKIDDDSQMGVFLAPIPNADNLETLLMERQAVSTRTYDDDAMTARFVRSNGITVVCYTVEDVTIDEGEMIAAQCELLDDWSVESFSKAVHAALDAEDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064945

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences