Metagenome / Metatranscriptome Family F064925

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064925
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	85 residues
Representative Sequence	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Number of Associated Samples	113
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.12 %
% of genes near scaffold ends (potentially truncated)	23.44 %
% of genes from short scaffolds (< 2000 bps)	74.22 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.406 % of family members)
Environment Ontology (ENVO)	Unclassified (42.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (28.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.86% β-sheet: 7.34% Coil/Unstructured: 57.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00313	CSD	18.75
PF17167	Glyco_hydro_36	17.97
PF08299	Bac_DnaA_C	8.59
PF11638	DnaA_N	5.47
PF07355	GRDB	1.56
PF02639	DUF188	0.78
PF07238	PilZ	0.78
PF01425	Amidase	0.78
PF13185	GAF_2	0.78
PF00694	Aconitase_C	0.78
PF08352	oligo_HPY	0.78
PF02777	Sod_Fe_C	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	8.59
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.78
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	71.09 %
Unclassified	root	N/A	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	71.09 %
Unclassified	root	N/A	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	70.31 %
Unclassified	root	N/A	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
Thermoflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	65.62 %
Unclassified	root	N/A	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
unclassified Thermoflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → unclassified Thermoflexia	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	65.62 %
Unclassified	root	N/A	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
Thermoflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → unclassified Thermoflexia → Thermoflexia bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100202505	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1876	Open in IMG/M
3300002886\|JGI25612J43240_1010441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1360	Open in IMG/M
3300002914\|JGI25617J43924_10128425	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	887	Open in IMG/M
3300005295\|Ga0065707_10606827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300005341\|Ga0070691_10134730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1254	Open in IMG/M
3300005406\|Ga0070703_10020220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1936	Open in IMG/M
3300005444\|Ga0070694_100015147	All Organisms → cellular organisms → Bacteria	4835	Open in IMG/M
3300005444\|Ga0070694_101294090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300005536\|Ga0070697_100300666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1379	Open in IMG/M
3300005549\|Ga0070704_100170815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1729	Open in IMG/M
3300005549\|Ga0070704_101805068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	566	Open in IMG/M
3300005876\|Ga0075300_1000636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2300	Open in IMG/M
3300005878\|Ga0075297_1010555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	892	Open in IMG/M
3300005879\|Ga0075295_1023925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300005890\|Ga0075285_1049631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300006047\|Ga0075024_100070737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1487	Open in IMG/M
3300006050\|Ga0075028_100280567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300006176\|Ga0070765_100263130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1585	Open in IMG/M
3300006354\|Ga0075021_10340064	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300006755\|Ga0079222_10879484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	748	Open in IMG/M
3300009038\|Ga0099829_10000147	All Organisms → cellular organisms → Bacteria	34884	Open in IMG/M
3300009088\|Ga0099830_11319886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → unclassified Thermoflexia → Thermoflexia bacterium	600	Open in IMG/M
3300009143\|Ga0099792_10027445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2605	Open in IMG/M
3300009147\|Ga0114129_10144731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3256	Open in IMG/M
3300009821\|Ga0105064_1122338	Not Available	545	Open in IMG/M
3300010391\|Ga0136847_12044383	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	721	Open in IMG/M
3300010397\|Ga0134124_12210262	Not Available	590	Open in IMG/M
3300010400\|Ga0134122_10946772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300010400\|Ga0134122_13138159	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300011120\|Ga0150983_15415712	Not Available	2511	Open in IMG/M
3300011419\|Ga0137446_1010732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1731	Open in IMG/M
3300011429\|Ga0137455_1114723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	794	Open in IMG/M
3300011438\|Ga0137451_1035657	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1447	Open in IMG/M
3300012096\|Ga0137389_10287013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1391	Open in IMG/M
3300012164\|Ga0137352_1020187	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300012200\|Ga0137382_10566429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300012202\|Ga0137363_11252821	Not Available	629	Open in IMG/M
3300012203\|Ga0137399_10416564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300012359\|Ga0137385_11242699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300012918\|Ga0137396_10405726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300012918\|Ga0137396_11150021	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300012923\|Ga0137359_10274925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1501	Open in IMG/M
3300012925\|Ga0137419_10137177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1750	Open in IMG/M
3300012927\|Ga0137416_11473077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300012929\|Ga0137404_10482029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300012930\|Ga0137407_10185474	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1859	Open in IMG/M
3300012931\|Ga0153915_10172223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2361	Open in IMG/M
3300012931\|Ga0153915_10336930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1693	Open in IMG/M
3300012931\|Ga0153915_10485371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1411	Open in IMG/M
3300012957\|Ga0164303_11239385	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300014881\|Ga0180094_1045140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300014884\|Ga0180104_1025023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1502	Open in IMG/M
3300014885\|Ga0180063_1041718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1304	Open in IMG/M
3300015259\|Ga0180085_1073466	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300015264\|Ga0137403_10957627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300017927\|Ga0187824_10071821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1088	Open in IMG/M
3300017997\|Ga0184610_1000745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7415	Open in IMG/M
3300018000\|Ga0184604_10000228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5240	Open in IMG/M
3300018027\|Ga0184605_10044693	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300018031\|Ga0184634_10080885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1396	Open in IMG/M
3300018052\|Ga0184638_1141685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	871	Open in IMG/M
3300018053\|Ga0184626_10007239	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4268	Open in IMG/M
3300018071\|Ga0184618_10023630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2042	Open in IMG/M
3300018074\|Ga0184640_10111178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1200	Open in IMG/M
3300018422\|Ga0190265_10013493	All Organisms → cellular organisms → Bacteria	6258	Open in IMG/M
3300018422\|Ga0190265_10025817	All Organisms → cellular organisms → Bacteria	4785	Open in IMG/M
3300018422\|Ga0190265_11582589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300018429\|Ga0190272_10142577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1633	Open in IMG/M
3300019249\|Ga0184648_1367565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300019877\|Ga0193722_1046338	Not Available	1106	Open in IMG/M
3300019879\|Ga0193723_1008526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3341	Open in IMG/M
3300019881\|Ga0193707_1004231	All Organisms → cellular organisms → Bacteria	5114	Open in IMG/M
3300019881\|Ga0193707_1114740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300019882\|Ga0193713_1076860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	942	Open in IMG/M
3300019883\|Ga0193725_1000768	All Organisms → cellular organisms → Bacteria	9148	Open in IMG/M
3300020003\|Ga0193739_1011940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2277	Open in IMG/M
3300020063\|Ga0180118_1154053	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	890	Open in IMG/M
3300020067\|Ga0180109_1190335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300020199\|Ga0179592_10395164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300020580\|Ga0210403_10989449	Not Available	659	Open in IMG/M
3300020581\|Ga0210399_10008570	All Organisms → cellular organisms → Bacteria	7996	Open in IMG/M
3300021090\|Ga0210377_10015244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5770	Open in IMG/M
3300021972\|Ga0193737_1041584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300024330\|Ga0137417_1017785	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300025165\|Ga0209108_10100071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1564	Open in IMG/M
3300025324\|Ga0209640_10003606	All Organisms → cellular organisms → Bacteria	13530	Open in IMG/M
3300025885\|Ga0207653_10008900	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300025910\|Ga0207684_11092378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300025922\|Ga0207646_10730675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	884	Open in IMG/M
3300026285\|Ga0209438_1098010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300026358\|Ga0257166_1001768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2088	Open in IMG/M
3300026371\|Ga0257179_1003054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1414	Open in IMG/M
3300026376\|Ga0257167_1015159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1067	Open in IMG/M
3300026469\|Ga0257169_1029377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300026496\|Ga0257157_1006449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1811	Open in IMG/M
3300027511\|Ga0209843_1080488	Not Available	557	Open in IMG/M
3300027875\|Ga0209283_10091171	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1985	Open in IMG/M
3300027894\|Ga0209068_10774349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300027903\|Ga0209488_10174837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1622	Open in IMG/M
3300027915\|Ga0209069_10086587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1501	Open in IMG/M
3300028536\|Ga0137415_10098899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2770	Open in IMG/M
3300028673\|Ga0257175_1079481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300028792\|Ga0307504_10071907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300028792\|Ga0307504_10104997	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	905	Open in IMG/M
3300028792\|Ga0307504_10335638	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300028803\|Ga0307281_10009307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2712	Open in IMG/M
3300028819\|Ga0307296_10405589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1002348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3527	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1032647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1085	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1014082	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300031455\|Ga0307505_10178482	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300031716\|Ga0310813_10207438	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031720\|Ga0307469_10091373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2103	Open in IMG/M
3300031740\|Ga0307468_100028038	All Organisms → cellular organisms → Bacteria	2630	Open in IMG/M
3300031820\|Ga0307473_10263900	Not Available	1063	Open in IMG/M
3300032174\|Ga0307470_10054718	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300032180\|Ga0307471_100356807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1574	Open in IMG/M
3300032770\|Ga0335085_10003380	All Organisms → cellular organisms → Bacteria	27745	Open in IMG/M
3300032782\|Ga0335082_10159082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2179	Open in IMG/M
3300033233\|Ga0334722_10138762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1826	Open in IMG/M
3300033432\|Ga0326729_1058418	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300033433\|Ga0326726_10026375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5054	Open in IMG/M
3300033433\|Ga0326726_10191395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1884	Open in IMG/M
3300033500\|Ga0326730_1011747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1914	Open in IMG/M
3300033500\|Ga0326730_1030873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300033513\|Ga0316628_100101113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3232	Open in IMG/M
3300033513\|Ga0316628_100282844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2052	Open in IMG/M
3300033813\|Ga0364928_0064404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	24.22%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.31%
Sediment	Environmental → Aquatic → Sediment	16.41%
Freshwater	Environmental → Aquatic → Freshwater	7.81%
Peat	Environmental → Terrestrial → Peat	3.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.41%
Loam	Environmental → Terrestrial → Soil → Loam	10.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Sand	Environmental → Terrestrial → Soil → Sand	3.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.12%
Lake	Environmental → Aquatic → Freshwater → Lake	1.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.12%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.12%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002025054	3300002245	Forest Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTXTLRGGRQPCRRCGLXGGARLGAAPSXWDTFLDRTVMAR*
JGI25612J43240_10104411	3300002886	Grasslands Soil	AATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
JGI25617J43924_101284252	3300002914	Grasslands Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDVRLGYIP*
Ga0065707_106068273	3300005295	Switchgrass Rhizosphere	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKQDARRAIAVLFRWPIGLTTILRHGPDP
Ga0070691_101347301	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEELARCHVGAMLRDQPGRYYCAGCLASLAETVAWTKRDARRAVAVLFRWPIGLTITMRRRRPCRGCGQVGEARLGAARLAGGSVAV*
Ga0070703_100202202	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0070694_10001514710	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEELARCHVGAMLRDQPGRYYCAGCLASLAETVAWTKRDARRAIAVLFRWPIGLTITMRRRRPCRGCGQVGGARLGATRLAGGSVAV*
Ga0070694_1012940901	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREVRRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0070697_1003006662	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0070704_1001708153	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKQDARRAIAVLFRWPIGLTTILRHGPDPCGQCGVVGGALLGSV*
Ga0070704_1018050681	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LRDQPGRYYCAGCLASLAETVAWTKRDARRAVAVLFRWPIGLTITMRRRRPCRGCGQVGGARLGATRLAGGSVAV*
Ga0075300_10006366	3300005876	Rice Paddy Soil	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTMTMRRRRPCRGCGQVGGARLGAARVAGASVPV*
Ga0075297_10105553	3300005878	Rice Paddy Soil	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTITMRRRRPCRGCGQVGRARLGAARLAGGSVAV*
Ga0075295_10239251	3300005879	Rice Paddy Soil	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTMTMRRRRPCRGCGQVGRARLGAARLAGGSVAV*
Ga0075285_10496311	3300005890	Rice Paddy Soil	MLGEELARCHVGAMLRDQPGRYYCAGCLASLAETVAWTKRDARRAVAVLFRWPIGLTITMRRRRPCRGCGQVG
Ga0075024_1000707373	3300006047	Watersheds	LIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLGRGRQPCRRCGLVGGARLGSGPSARDTFLDRTVMAR*
Ga0075028_1002805673	3300006050	Watersheds	MIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLGRGRQPCRRCGLVGGARLGSGPSARDTFLDRTVMAR*
Ga0070765_1002631302	3300006176	Soil	MLRSRPGRYYCARCLARLLATTAWTKRDARRAIAVLFLWPIGLSTMVHDRRHPCRDCGQIGGARLGAMGIGAL*
Ga0075021_103400643	3300006354	Watersheds	GAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLGRGRQPCRRCGLVGGARLGSGPSARDTFLDRTVMAR*
Ga0079222_108794842	3300006755	Agricultural Soil	VTLGEELARCHVGAMLRALPGRYYCARCLAGLVEAAAWTKRDARRAIAVLFRWPIGLTIAVGRRRRPCRGCGQVGGARLGVLIHDIR*
Ga0099829_1000014729	3300009038	Vadose Zone Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV*
Ga0099830_113198862	3300009088	Vadose Zone Soil	CAAASPIAVADRPATLTMIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDVRLGYIP*
Ga0099792_100274454	3300009143	Vadose Zone Soil	VAARPLAIADGAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0114129_101447312	3300009147	Populus Rhizosphere	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKQDARRAIAILFRWPIGLTTILRHGPDPCGQCGVVGGALLGSV*
Ga0105064_11223381	3300009821	Groundwater Sand	MMGEELARCHLGALLRTRRGCYYCARCLGRLLGTISWTKRDARRAIAVLFEWPVGLRTLRRPCWDCGHVGGAR
Ga0136847_120443832	3300010391	Freshwater Sediment	MGEELARCHAGAMLRARPGCYYCAPCVARRLGTAAVWTKRDARRAIAALFLGPVGLTAILRHGPDPCGDCGIVGGALLGSV*
Ga0134124_122102621	3300010397	Terrestrial Soil	VAARPLAIADRAATIHMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0134122_109467723	3300010400	Terrestrial Soil	DRPPPLGMIGEELARCHVGAMLRAHPGRYYCARCLAGLLDAAVSTRREARRAIAVLFRWPIGLTITMDRGRQPCRGCGQVGGARLGAGSAASDTFLDRAGAAR*
Ga0134122_131381591	3300010400	Terrestrial Soil	RPGHYYCASCLARRLGPAALWTRRDAHRAIAVLFRSPIRLTATLRDGPDPCGDCGAVGGALLGSM*
Ga0150983_154157121	3300011120	Forest Soil	MLRSRPGRYYCARCLARLLATTAWTKRDARRAIAVLFLWPIGLSTMVHDRRHPCRDCGQIGGARLGAMGIGTLSTAQDIP*
Ga0137446_10107322	3300011419	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFQWPIGLTTALRHRRDPCGDCGQVGGALLGAV*
Ga0137455_11147231	3300011429	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCG
Ga0137451_10356573	3300011438	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV*
Ga0137389_102870132	3300012096	Vadose Zone Soil	MIGEELARCHVGAMLREQPGRYYCAHCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0137352_10201872	3300012164	Soil	MMGEELARCHAGARLRAHPGRYYCARCLARVPETAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV*
Ga0137382_105664293	3300012200	Vadose Zone Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVHFRRPIGLIITLRGGRQLCRRCGLVGGARLGAAPSTWDTFLDRTVMAR*
Ga0137363_112528212	3300012202	Vadose Zone Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDDRLGYIP*
Ga0137399_104165642	3300012203	Vadose Zone Soil	MMGEELARCHAGAMLRARPGHYYCARCLAGLLGSAAVWTERDARRAIAVLFRRPIGLTAILRHGPDSCGHCGAVGGALLGSV*
Ga0137385_112426992	3300012359	Vadose Zone Soil	DRPATLTMIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDVRLGYIP*
Ga0137396_104057263	3300012918	Vadose Zone Soil	HVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGDVRLGYIP*
Ga0137396_111500211	3300012918	Vadose Zone Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGADDVRLGYIP*
Ga0137359_102749254	3300012923	Vadose Zone Soil	VAARPLAIADGAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0137419_101371773	3300012925	Vadose Zone Soil	MMGEELARCHAGAMLRARPGHYYCARCLAGLLGSAAVWTERDARRAIAVLFRRPIGLTAILRHGPDSCGHCGAV
Ga0137416_114730771	3300012927	Vadose Zone Soil	LAIADRAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDVRLGYIP*
Ga0137404_104820292	3300012929	Vadose Zone Soil	MMGEELARCHAGAMLRARPGHYYCARCLAGLLGSAAVWTERDARRAIAVLFRRPIGLTTILRHGPDSCGHCGAVGGALLGSV*
Ga0137407_101854742	3300012930	Vadose Zone Soil	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKQDARRAIAVLFRWPIGLTAILRHGPDPCGQCGVVGGALLGSV*
Ga0153915_101722234	3300012931	Freshwater Wetlands	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTITMRRRRPCPGCGEVSGARLGAARLTAGSEPA*
Ga0153915_103369304	3300012931	Freshwater Wetlands	MLGEELARCHVGAMLRGQPGRYYCARCLARLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQVGGARLGAGAVRLVAGRPTVMI*
Ga0153915_104853713	3300012931	Freshwater Wetlands	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQVGGARLGAVAVRLAGSVPA*
Ga0164303_112393852	3300012957	Soil	IRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGSVLDRAVMAR*
Ga0180094_10451402	3300014881	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVPDTAAWTKRDARRAIAVLFRWPIGLTTALLHRRDPCGDCGQVGGALLGAV*
Ga0180104_10250232	3300014884	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGLTTALRERRDPCGDCGQVGGALLGAV*
Ga0180063_10417182	3300014885	Soil	MGEELARCHAGAMLRARPGHYYCAPCLARLLGTAAVWTKRDARRAIAVLFRWPIGLTAVLRHGADPCGDCGVVGGALLGSV*
Ga0180085_10734662	3300015259	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVPDTAAWTKRDARRAIAMLFRWPIGLTTALRERRDPCGDCGQVGGALLGAV*
Ga0137403_109576271	3300015264	Vadose Zone Soil	LAIADRAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP*
Ga0187824_100718213	3300017927	Freshwater Sediment	MLGEELARCHVGAMLRELPGRYYCARCLAGLVEEAAWTKRDARRAIAVLFRWPIGLTITMGRRRRPCRGCGQIRGARLGALKNMHVYA
Ga0184610_10007452	3300017997	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0184604_100002282	3300018000	Groundwater Sediment	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKGDARWAIAVLFRWPIGLTAILRYGPDPCGHCGVVGGALLGSV
Ga0184605_100446933	3300018027	Groundwater Sediment	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKGDARRAIAVLFRWPIGLTAILRHGPDPCGHCGVVGGALLGSV
Ga0184634_100808852	3300018031	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGVTTALRHRRDPCGDCGQVGGALLGAV
Ga0184638_11416851	3300018052	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGA
Ga0184626_100072393	3300018053	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0184618_100236303	3300018071	Groundwater Sediment	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKGDARRAIAVLFRWPIGLTAILRHGPDPCGQCGVVGGALLGSV
Ga0184640_101111782	3300018074	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTRRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0190265_1001349310	3300018422	Soil	MGEELARCHVGAMLRARPGRYYCAGCLARGLDTAPWTRFEARRAIAALFRRPIGLRTTLRLRHNPCGDCGQLIGARLGAA
Ga0190265_100258172	3300018422	Soil	MMGEELARCHAGAMLRDHPGHYYCAGCLARRLGPPAVWTKRDARRAIAVLFLGPIGLTATLRHGPDPCGDCGVIGGALLGSL
Ga0190265_115825892	3300018422	Soil	MMGEEMARCHAGAMLRARPGHYYCARCLARLLGTAAAWTKRDARRAIAVLFRWPICLTAILRHGPDPCGDCGVVGGALLGSV
Ga0190272_101425774	3300018429	Soil	MGEELARCHAGAMLRARPGRYYCARCVTRLLGTAAVWTKRDARRAIAALFLGPIGLTAILRHGPDPCGDCGIVGGALLGSV
Ga0184648_13675651	3300019249	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDC
Ga0193722_10463383	3300019877	Soil	MIGEELARCHVGAMLRDQPGRYYCARCIVALLDGAVSTKREARRAIAVLFRRPIGLTTTLRGGRQPCRRCGLVGGARLGAAPSTWDTFLDRTVMAR
Ga0193723_10085263	3300019879	Soil	MMGEELARCHAGAMLRARPGHYYCASCLARRLGPAALWTRRDAQRAIAVLFRAPIRLTATLRDGPDPCGDCGAVGGALLGSV
Ga0193707_10042317	3300019881	Soil	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKRDARRAIAVLFQWPIGLTAILRHGPDPCGHCGVVGGALLGSV
Ga0193707_11147401	3300019881	Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLRGGRQPCRRCGLVGGARLGAAPSTWDTFLDRTVMAR
Ga0193713_10768603	3300019882	Soil	MMGEELARCHAGAMLRARPGHYYCAPCLARRLGPAALWTRRDAQRAIAVLFRAPIRLTATLRDGPDPCGDCGAVGGALLGSV
Ga0193725_10007682	3300019883	Soil	MMGEELARCHAGAMLRASPGHYYCARCLAGLLGSAAVWTKRDARRAIAVLFQWPIGLTAILRHGPDPCGHCGVVGGALLGSV
Ga0193739_10119401	3300020003	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTERDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0180118_11540532	3300020063	Groundwater Sediment	MMGEELARCHAGARLRAHPGRYYCARCLARVPETAAWTKRDARRAIAMLFRWPIGLTTALRERRDPCGDCGQVGGALLGAV
Ga0180109_11903352	3300020067	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVPDTAAWTKRDARRAIAMLFRWPIGLSTALRERRDPCGDCGQVGGALLGAV
Ga0179592_103951642	3300020199	Vadose Zone Soil	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRRPIGLTATLRGGRQPCRRCGLVGGARLGAAPSTWDTFLDRTVMAR
Ga0210403_109894492	3300020580	Soil	MLRSRPGRYYCARCLARLLATTAWTKRDARRAIAVLFLWPIGLSTMVHDRRHPCRDCGQIGGARLGAMGIGAL
Ga0210399_100085709	3300020581	Soil	MTSVGEELARCHVGAMLRSRPGRYYCARCLARLLATTAWTKRDARRAIAVLFLWPIGLSTMVCDRRHPCRDCGQIGGARLGAMGIGTLSTAQDIP
Ga0210377_100152445	3300021090	Groundwater Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFQWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0193737_10415842	3300021972	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRGLATAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAV
Ga0137417_10177852	3300024330	Vadose Zone Soil	TSGMMGEELARCHAGAMLRARPGHYYCARCLAGLLGSAAVWTERDARRAIAVLFRRPIGLTAILRHGPDSCGHCGAVGGALLGSV
Ga0209108_101000714	3300025165	Soil	MMGEELARCHVGAMLRERPGRFYCARCLGRLLDTAAWTKREARRAIAGLFRKPIGLKTTLRYRRNPCRDCGQASGARLGAA
Ga0209640_100036067	3300025324	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAMLFRWPIGLTTALREGRDPCGDCGQVGGALLGAV
Ga0207653_100089005	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0207684_110923781	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0207646_107306751	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTTTLRGGRQPCRGCGLVGGARLGAGDVRLGYIP
Ga0209438_10980103	3300026285	Grasslands Soil	PARRPARSQSLTAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0257166_10017681	3300026358	Soil	HVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0257179_10030542	3300026371	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALIGAV
Ga0257167_10151593	3300026376	Soil	ADRAATIRMIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0257169_10293772	3300026469	Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSP
Ga0257157_10064495	3300026496	Soil	MIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTATLRGGRQPCRRCGLVGGARLGAAPSTWDTFLDRTVMAR
Ga0209843_10804882	3300027511	Groundwater Sand	MMGEELARCHLGALLRTRRGCYYCARCLGRLLGTISWTKRDARRAIAVLFEWPVGLRTLRRPCWDCGHVGGARLGVG
Ga0209283_100911714	3300027875	Vadose Zone Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRVLDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDP
Ga0209068_107743491	3300027894	Watersheds	VGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLGRGRQPCRRCGLVGGARLGSGPSARDTFLDRTVMAR
Ga0209488_101748374	3300027903	Vadose Zone Soil	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPYRGCGLVGGARLGAGAVRLGYSP
Ga0209069_100865873	3300027915	Watersheds	LIGEELARCHVGAMLRDQPGRYYCARCLAALLDGAVSTKREARRAIAVLFRRPIGLTTTLGRGRQPCRRCGLVGGARLGSGPSARDTFLDRTVMAR
Ga0137415_100988992	3300028536	Vadose Zone Soil	MMGEELARCHAGAMLRARPGHYYCARCLAGLLGSAAVWTERDARRAIAVLFRRPIGLTAILRHGPDSCGHCGAVGGALLGSV
Ga0257175_10794811	3300028673	Soil	MIGEELARCHVGAMLREQPGRYYCARCLAGLLDGAVSTKREARRAIAVLFRWPIGLTITLRRGRQPCRGCGLVGGARLGAGAVRLGYSPEVSTQD
Ga0307504_100719071	3300028792	Soil	APGMMGEELARCHAGAMLRAHPGRYYCAPCLAGRLGPAAVWTRRDAHRAIAVLFRWPIGLTATLRYGPDRCGDCGAAGGVLLGSV
Ga0307504_101049973	3300028792	Soil	MMGEELARCHAGAMLRARPGHYYCAPCLARRLGPAALWTRRDAHRAIAVLFRAPIRLTATLRDGPDPCGDCGAVGGALLGSA
Ga0307504_103356382	3300028792	Soil	MMGEELARCHAGAMLRARPGHYYCARCLARLLGTAAVWTKRDARRAIAVLFQWPIGLTAVLHHGPDPCGDCGVVGGALLGSA
Ga0307281_100093072	3300028803	Soil	MMGEELARCHAGALLRAHPGRYYCARCLTRILDTAAWTKRDARRAIAVLFRWPIGLTTALRHRRDPCGDCGQVGGALLGAA
Ga0307296_104055891	3300028819	Soil	MMGEELARCHAGAMLRARPGHYYCARCLARLLGSAAVWTKGDARRAIAVLFRWPIGLTAILRHGPDPCGHC
(restricted) Ga0255311_10023485	3300031150	Sandy Soil	VIGEELARCHAGAMLRARPGRYYCAPCLARRLGAAAVWTKRDARRAIGVLFRWPIGLTAILRHGADPCGDCGVVGGALLGSV
(restricted) Ga0255311_10326472	3300031150	Sandy Soil	MMGEELARCHAGAMLRARPGRYCCAPCLAQRLGPMAVWTRRDAYRAIAVLFRWPIGLTATLRYGREPCEDCGGVGGALLGSG
(restricted) Ga0255312_10140823	3300031248	Sandy Soil	MLGEELARCHVGAMLRELPGRYYCARCLAGLVEAAAWTRRDARRAIAVLFRWPIGLTIAMGDRRRPCRGCGQIGGARLGALKNMHVHA
Ga0307505_101784822	3300031455	Soil	MMGEELARCHAGAMLRARPGHYYCAPCLARRLGPAALWTRRDAQRAIAVLFRAPIRLTATLRDGPDPCGDCGAVGGALLGSM
Ga0310813_102074383	3300031716	Soil	MLGEELARCHVGAMLRDRPGRYYCARCLAGLVEAVTWTKRDARRAITVLFRWPIGLTVALRRRQPCRGCGQLGGARLGALVASRGRSGEVNEKMHVYA
Ga0307469_100913734	3300031720	Hardwood Forest Soil	MMGEELARCHAGAMLRARPGHYSCARCLARRLGPAALWTRRDAHRAIAVLFRSPIRLTATLRDGPDPCGDCGAVGGALLGSM
Ga0307468_1000280382	3300031740	Hardwood Forest Soil	MMGEELARCHAGAMLRARPGHYYCARCLARRLGPAALWTRRDAHRAIAVLFRSPIRLTATLRDGPDPCGDCGAVGGALLGSM
Ga0307473_102639001	3300031820	Hardwood Forest Soil	MTSVGEELARCHVGAMLRSRPGRYYCARCLARLLATTAWTKRDARRAIAVLFLWPIGLSTMVRDRRHPCRDCGQIGGARLGAMGIGAL
Ga0307470_100547182	3300032174	Hardwood Forest Soil	MMGEELARCHAGAMLRAHPGHYYCAPCVTRRLGPAAVWTKRDARRAIAGLFRGPIGLTAILCHGPDPCGDCGVVGGALLGSV
Ga0307471_1003568072	3300032180	Hardwood Forest Soil	LRAHPGHYYCAPCVTRRLGPAAVWTKRDARRAIAGLFRGPIGLTAILCHGPDPCGDCGVVGGALLGSV
Ga0335085_100033801	3300032770	Soil	RGRRMIGEELARCHVGSMLRSRRGLYYCARCLARLLDTATWTKREARRAIAALFQRPIGLRTTLCRRRNPCRDCGQVGGARLGAA
Ga0335082_101590822	3300032782	Soil	MIGEELARCHVGSMLRSRRGLYYCARCLARLLDTATWTKREARRAIAALFQRPIGLRTTLCRRRNPCRDCGQVGGARLGAA
Ga0334722_101387623	3300033233	Sediment	MGEELARCHAGAMLRDRPGHYYCARCLARLLGPAAVWTKGDARRAIAVLFRWPIGLTAILRHGPDPCGDCGVIGGALLGSA
Ga0326729_10584181	3300033432	Peat Soil	MLGEELARCHVGAMLRGQPGRYYCARCLARLVEAVAWTKRDARRAISVLFRWPIGLTIAMRRRRQPCRGCGQIGGARLGAVAMAGGS
Ga0326726_100263757	3300033433	Peat Soil	MLGEELARCHVGAMLRGQPGRYYCARCLASLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQ
Ga0326726_101913953	3300033433	Peat Soil	MLGEELARCHVGAMLRGQPGRYYCARCLARLVEAVAWTRRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQIGGARLGAVAMAGGS
Ga0326730_10117474	3300033500	Peat Soil	MLGEELARCHVGAMLRGQPGRYYCARCLARLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQIGGARLGAVAMAGGS
Ga0326730_10308733	3300033500	Peat Soil	MLGEELARCHVGAMLRGQPGRYYCARCLASLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQVGGARLGAVAVRLAGGSVPA
Ga0316628_1001011133	3300033513	Soil	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTITMRRRRPCRGCGEVSGARLGAARLAAGSEPA
Ga0316628_1002828445	3300033513	Soil	MLGEELARCHVGAMLRGQPGRYYCARCLAGLVEAVAWTKRDARRAIAVLFRWPIGLTIAMRRRRQPCRGCGQVGGARLGAVAVRLAGSVPA
Ga0364928_0064404_90_335	3300033813	Sediment	MMGEELARCHAGALLRAHPGRYYCARCLTRVLATAAWTKRDARRAIAVLFRWPIGLTTALRHPRDPCGDCGQVGGALLGAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters