Metagenome Family F064891

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064891
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	63 residues
Representative Sequence	MKYNKDQWISSFEDAMVRLRPHMSARVLTTIGLMAWNKYGTKDVDPHKAAGEWSKSLDKP
Number of Associated Samples	98
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	56.88 %
% of genes near scaffold ends (potentially truncated)	24.22 %
% of genes from short scaffolds (< 2000 bps)	70.31 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.906 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (11.719 % of family members)
Environment Ontology (ENVO)	Unclassified (60.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (82.812 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.14% β-sheet: 0.00% Coil/Unstructured: 48.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.258.1.1: PG0816-like	d2apla1	2apl	0.67823
c.37.1.20: Extended AAA-ATPase domain	d1in4a2	1in4	0.67271
a.126.1.0: automated matches	d6hn1a1	6hn1	0.67223
a.128.1.0: automated matches	d7kjga_	7kjg	0.66805
a.69.3.1: 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	d2egha1	2egh	0.66766

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00155	Aminotran_1_2	3.91
PF13474	SnoaL_3	3.91
PF02586	SRAP	3.12
PF00072	Response_reg	2.34
PF01757	Acyl_transf_3	2.34
PF00691	OmpA	2.34
PF13545	HTH_Crp_2	1.56
PF13663	DUF4148	1.56
PF07793	DUF1631	1.56
PF08448	PAS_4	1.56
PF07311	Dodecin	1.56
PF13442	Cytochrome_CBB3	1.56
PF00392	GntR	0.78
PF00378	ECH_1	0.78
PF02767	DNA_pol3_beta_2	0.78
PF02630	SCO1-SenC	0.78
PF00768	Peptidase_S11	0.78
PF13676	TIR_2	0.78
PF03330	DPBB_1	0.78
PF01068	DNA_ligase_A_M	0.78
PF01527	HTH_Tnp_1	0.78
PF01814	Hemerythrin	0.78
PF12412	DUF3667	0.78
PF03061	4HBT	0.78
PF12244	DUF3606	0.78
PF07364	DUF1485	0.78
PF06628	Catalase-rel	0.78
PF01209	Ubie_methyltran	0.78
PF00282	Pyridoxal_deC	0.78
PF00702	Hydrolase	0.78
PF02446	Glyco_hydro_77	0.78
PF07369	DUF1488	0.78
PF01145	Band_7	0.78
PF04357	TamB	0.78
PF04392	ABC_sub_bind	0.78
PF14520	HHH_5	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.12
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.56
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.78
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.78
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.78
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.78
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.78
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.78
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.78
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
All Organisms	root	All Organisms	46.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
cellular organisms	root	All Organisms → cellular organisms	46.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	23.44 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3.91 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	3.12 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.56 %
Granulosicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae	0.78 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1.56 %
Schlegelella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Schlegelella	1.56 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.56 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.78 %
Pseudorhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	0.78 %
Granulosicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus	0.78 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.78 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.78 %
unclassified Comamonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Schlegelella koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Schlegelella → Schlegelella koreensis	1.56 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.56 %
unclassified Pseudorhodoferax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax → unclassified Pseudorhodoferax	0.78 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.78 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.78 %
Comamonadaceae bacterium URHA0028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium URHA0028	0.78 %
Granulosicoccus antarcticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus	0.78 %
Aeromonas veronii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	0.78 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.91 %
Schlegelella koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Schlegelella → Schlegelella koreensis	1.56 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.56 %
Burkholderia sp. Bp9131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Bp9131	0.78 %
Methylibium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	0.78 %
Pseudorhodoferax sp. Leaf267	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax → unclassified Pseudorhodoferax → Pseudorhodoferax sp. Leaf267	0.78 %
Granulosicoccus antarcticus IMCC3135	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus → Granulosicoccus antarcticus IMCC3135	0.78 %
Comamonadaceae bacterium URHA0028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium URHA0028	0.78 %
Aeromonas veronii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	0.78 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01ENJS3	Not Available	512	Open in IMG/M
2162886012\|MBSR1b_contig_2693894	Not Available	1285	Open in IMG/M
2170459020\|G1P06HT02FXWG2	Not Available	503	Open in IMG/M
3300002155\|JGI24033J26618_1046444	Not Available	615	Open in IMG/M
3300004157\|Ga0062590_102607955	Not Available	537	Open in IMG/M
3300004463\|Ga0063356_103718187	Not Available	657	Open in IMG/M
3300005328\|Ga0070676_10570156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Schlegelella → Schlegelella koreensis	813	Open in IMG/M
3300005328\|Ga0070676_10852059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	676	Open in IMG/M
3300005333\|Ga0070677_10011205	All Organisms → cellular organisms → Bacteria → Proteobacteria	3085	Open in IMG/M
3300005333\|Ga0070677_10249424	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005335\|Ga0070666_10362009	Not Available	1039	Open in IMG/M
3300005344\|Ga0070661_100491650	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005347\|Ga0070668_101668447	Not Available	585	Open in IMG/M
3300005355\|Ga0070671_101435205	Not Available	610	Open in IMG/M
3300005355\|Ga0070671_101459569	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005356\|Ga0070674_100012857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium URHA0028	5153	Open in IMG/M
3300005356\|Ga0070674_100265586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	1354	Open in IMG/M
3300005367\|Ga0070667_100019527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5624	Open in IMG/M
3300005455\|Ga0070663_101882035	Not Available	537	Open in IMG/M
3300005456\|Ga0070678_101791982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	579	Open in IMG/M
3300005459\|Ga0068867_102159403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300005539\|Ga0068853_100522774	Not Available	1122	Open in IMG/M
3300005539\|Ga0068853_101466778	Not Available	660	Open in IMG/M
3300005617\|Ga0068859_101411026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	768	Open in IMG/M
3300005618\|Ga0068864_100079605	All Organisms → cellular organisms → Bacteria → Proteobacteria	2869	Open in IMG/M
3300005618\|Ga0068864_100149001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2118	Open in IMG/M
3300006177\|Ga0075362_10035565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2175	Open in IMG/M
3300006178\|Ga0075367_10043873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2619	Open in IMG/M
3300006178\|Ga0075367_10248628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax → unclassified Pseudorhodoferax → Pseudorhodoferax sp. Leaf267	1115	Open in IMG/M
3300006178\|Ga0075367_10401726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	867	Open in IMG/M
3300006195\|Ga0075366_10002305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9756	Open in IMG/M
3300006195\|Ga0075366_10004765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	7315	Open in IMG/M
3300006195\|Ga0075366_10048547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2517	Open in IMG/M
3300006195\|Ga0075366_10115696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1615	Open in IMG/M
3300006195\|Ga0075366_10127478	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300006195\|Ga0075366_10515953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	739	Open in IMG/M
3300006195\|Ga0075366_10809213	Not Available	583	Open in IMG/M
3300006237\|Ga0097621_100019185	Not Available	5244	Open in IMG/M
3300006353\|Ga0075370_10129800	Not Available	1470	Open in IMG/M
3300006353\|Ga0075370_10335803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	901	Open in IMG/M
3300006796\|Ga0066665_11473810	Not Available	530	Open in IMG/M
3300009094\|Ga0111539_11709323	Not Available	730	Open in IMG/M
3300009148\|Ga0105243_10015738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5720	Open in IMG/M
3300009156\|Ga0111538_11771690	Not Available	777	Open in IMG/M
3300009551\|Ga0105238_10947124	Not Available	881	Open in IMG/M
3300009551\|Ga0105238_11108331	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009551\|Ga0105238_12046890	Not Available	606	Open in IMG/M
3300009789\|Ga0126307_10781034	Not Available	771	Open in IMG/M
3300012469\|Ga0150984_103832686	Not Available	700	Open in IMG/M
3300012925\|Ga0137419_10557388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	916	Open in IMG/M
3300013104\|Ga0157370_11712146	Not Available	564	Open in IMG/M
3300013296\|Ga0157374_11295142	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300013297\|Ga0157378_10718352	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300013297\|Ga0157378_11004860	Not Available	868	Open in IMG/M
3300013308\|Ga0157375_12062636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Bp9131	678	Open in IMG/M
3300014968\|Ga0157379_12488417	Not Available	517	Open in IMG/M
3300014969\|Ga0157376_10872159	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300015077\|Ga0173483_10820803	Not Available	539	Open in IMG/M
3300015371\|Ga0132258_10883101	All Organisms → cellular organisms → Bacteria → Proteobacteria	2257	Open in IMG/M
3300015371\|Ga0132258_12731911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Granulosicoccaceae → Granulosicoccus → Granulosicoccus antarcticus → Granulosicoccus antarcticus IMCC3135	1231	Open in IMG/M
3300015372\|Ga0132256_101938452	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300015374\|Ga0132255_102378466	Not Available	809	Open in IMG/M
3300017792\|Ga0163161_10015725	All Organisms → cellular organisms → Bacteria → Proteobacteria	5277	Open in IMG/M
3300018067\|Ga0184611_1056649	Not Available	1314	Open in IMG/M
3300018429\|Ga0190272_11833388	Not Available	634	Open in IMG/M
3300018476\|Ga0190274_12059498	Not Available	667	Open in IMG/M
3300018481\|Ga0190271_10931508	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300018482\|Ga0066669_11152195	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300018920\|Ga0190273_10675567	Not Available	796	Open in IMG/M
3300018920\|Ga0190273_11188248	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300020034\|Ga0193753_10216434	Not Available	870	Open in IMG/M
3300023268\|Ga0247765_1107527	Not Available	592	Open in IMG/M
3300024288\|Ga0179589_10174657	Not Available	928	Open in IMG/M
3300025321\|Ga0207656_10143435	Not Available	1127	Open in IMG/M
3300025893\|Ga0207682_10134805	Not Available	1104	Open in IMG/M
3300025893\|Ga0207682_10217282	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300025899\|Ga0207642_10615136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	677	Open in IMG/M
3300025907\|Ga0207645_10042188	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300025907\|Ga0207645_10095757	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300025920\|Ga0207649_11586345	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300025923\|Ga0207681_10807357	Not Available	784	Open in IMG/M
3300025925\|Ga0207650_10535374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	981	Open in IMG/M
3300025925\|Ga0207650_11217003	Not Available	641	Open in IMG/M
3300025930\|Ga0207701_11358193	Not Available	581	Open in IMG/M
3300025932\|Ga0207690_10088192	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300025933\|Ga0207706_10530243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1015	Open in IMG/M
3300025935\|Ga0207709_10018644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3890	Open in IMG/M
3300025941\|Ga0207711_11801309	Not Available	555	Open in IMG/M
3300025961\|Ga0207712_10187966	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300025986\|Ga0207658_10979382	Not Available	771	Open in IMG/M
3300026023\|Ga0207677_12144348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Schlegelella → Schlegelella koreensis	520	Open in IMG/M
3300026041\|Ga0207639_10988157	Not Available	788	Open in IMG/M
3300026089\|Ga0207648_10094489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	2614	Open in IMG/M
3300026095\|Ga0207676_11726328	Not Available	624	Open in IMG/M
3300027866\|Ga0209813_10453832	Not Available	525	Open in IMG/M
3300027907\|Ga0207428_11290247	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300028381\|Ga0268264_10735662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	982	Open in IMG/M
3300028536\|Ga0137415_10923483	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300028754\|Ga0307297_10121139	Not Available	875	Open in IMG/M
3300028786\|Ga0307517_10173517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1411	Open in IMG/M
3300028794\|Ga0307515_10056035	All Organisms → cellular organisms → Bacteria	5740	Open in IMG/M
3300028872\|Ga0307314_10309361	Not Available	506	Open in IMG/M
3300031730\|Ga0307516_10324187	Not Available	1211	Open in IMG/M
3300031731\|Ga0307405_10665740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	858	Open in IMG/M
3300031852\|Ga0307410_12129014	Not Available	502	Open in IMG/M
3300031903\|Ga0307407_11508806	Not Available	532	Open in IMG/M
3300032126\|Ga0307415_101981438	Not Available	567	Open in IMG/M
3300033180\|Ga0307510_10192338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300033180\|Ga0307510_10291606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1097	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	80.47%
Environmental	Environmental	18.75%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	80.47%
Terrestrial	Environmental → Terrestrial	15.62%
Aquatic	Environmental → Aquatic	3.12%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	43.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.31%
Roots	Host-Associated → Plants → Roots	16.41%
Soil	Environmental → Terrestrial → Soil	14.84%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Sediment	Environmental → Aquatic → Sediment	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	25.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.06%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	10.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.56%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Loam	Environmental → Terrestrial → Soil → Loam	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	25.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.41%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	10.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.16%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.72%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	10.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.69%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.34%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002184	Freshwater and sediment microbial communities from Lake Erie, Canada	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_02130390	2067725003	Soil	VTQYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWS
MBSR1b_0108.00003020	2162886012	Miscanthus Rhizosphere	VTQYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK
2NP_01069070	2170459020	Switchgrass, Maize And Mischanthus Litter	MKYNKDQWISSFEDAMVGLRPHITGRVLTSIALLAWHKFGTKDVDPQKAASEWSKSMDKP
JGI24033J26618_10464441	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	QYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK
JGI24770J26754_101169912	3300002184	Freshwater And Sediment	MTTTPRKHNKDQWISSFEDEMLRLRPHMSARVLASIGLMAWSRYGTAGSAPYDAARRWSESMDRESR*
Ga0062590_1026079551	3300004157	Soil	VTQYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK*
Ga0063356_1037181871	3300004463	Arabidopsis Thaliana Rhizosphere	MSMYNKDQWISSFEDAMVKLRPRMSARVLTTIGLMAWNKYGKNDVDPHEAAGAWSRSMDKPA*
Ga0070676_105701562	3300005328	Miscanthus Rhizosphere	MKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKVK*
Ga0070676_108520592	3300005328	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARVR*
Ga0070670_1002361892	3300005331	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASIDGSSPSGP*
Ga0070677_100112051	3300005333	Miscanthus Rhizosphere	VIYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGVDPALAALEWSQSMDKAK*
Ga0070677_102494242	3300005333	Miscanthus Rhizosphere	VKYNKDQWISSFEDAMVKLRPHITMRILTTIGLMAWNQKGTKGVDPALAALEW
Ga0068869_1015616281	3300005334	Miscanthus Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASMDGSSPSGP*
Ga0070666_103620093	3300005335	Switchgrass Rhizosphere	MTQYNKDQWISSFEDAMVKLRPHMGMRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK*
Ga0070661_1004916503	3300005344	Corn Rhizosphere	VKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWHKHGTKDEDPKKAARDWSKAMDAKK*
Ga0070668_1016684471	3300005347	Switchgrass Rhizosphere	VIYDKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGVDPALAALEWSRSMDKAK*
Ga0070671_1014352053	3300005355	Switchgrass Rhizosphere	MTQYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQLAALEWSNSMDRSK*
Ga0070671_1014595692	3300005355	Switchgrass Rhizosphere	MKYNKDQWISSFEDAMVKLRPHMSARVLTTIGLMAWNRYGKNDVDPHKAAGEWSKSMDKPA*
Ga0070674_1000128574	3300005356	Miscanthus Rhizosphere	VKYNKDQWISSFEDAMVKLRPHITMRILTTIGLMAWNQKGTKGVDPALAALEWSNSMDKSK*
Ga0070674_1002655862	3300005356	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARAP*
Ga0070688_1008945292	3300005365	Switchgrass Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHMTARVLASICLMAWSQYGVKGTDPHQAARTWSASMDGSSTPRP*
Ga0070667_1000195277	3300005367	Switchgrass Rhizosphere	MKYNKDQWISSFEDAMVKLRPHTSMRLLTTISLMAWNQRGTKDVDPAVAAAEWSKSMDKSR*
Ga0070667_1004476602	3300005367	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASMDGSSTPRR*
Ga0070663_1018820351	3300005455	Corn Rhizosphere	MAYNKDQWISSFEDAVVKLRPHITMCILTTIGLMAWNQKGTKGVDPALTALEWSKSWTSLK*
Ga0070678_1017919822	3300005456	Miscanthus Rhizosphere	ETACAMKYNKDQWISSFEDALVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARVR*
Ga0068867_1021594031	3300005459	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHLEADEWSKTLDKPPARAR*
Ga0068853_1005227742	3300005539	Corn Rhizosphere	MRVGLTAGRAMYNKDQWISSFEDAMVSLRPHMSARVLASIALLAWNRYGRKEVDPRQAATEWSRTMDAAD*
Ga0068853_1014667782	3300005539	Corn Rhizosphere	MKYNKDQWISSFEDAILKLRPHTTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKAK*
Ga0070665_1000100861	3300005548	Switchgrass Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHMTARVLASICLMAWSQYGVRGADPHQAARTWSATMDGSSTPRP*
Ga0068859_1000845244	3300005617	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTSSASMDGSSPSGP*
Ga0068859_1014110261	3300005617	Switchgrass Rhizosphere	MKYNKDQWISSFEDAMVRLRPHMSARVLTTVGLMAWNKYGTKDVDPHKAAGEWSKLLDKPA*
Ga0068864_1000605314	3300005618	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASMDG
Ga0068864_1000796053	3300005618	Switchgrass Rhizosphere	VIYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMVWNQKGTKGVALALAALEWSQSMDKAK*
Ga0068864_1001490015	3300005618	Switchgrass Rhizosphere	VTQYNKDQWISSFEDAMVQLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK*
Ga0075362_100355652	3300006177	Populus Endosphere	MKYNKDQWMSSFEDAMVRLRPHMSARVLTTIGLMAWNKYGTKDVDPHKAAGEWSKSLDKPA*
Ga0075367_100438732	3300006178	Populus Endosphere	MKYSKDQWISSFEDAMVRLRPHMSARVLTTVGLMAWNKYGTKDVDPHKAAGEWSKLLDKPA*
Ga0075367_102486282	3300006178	Populus Endosphere	QWISSFEDAMVRLRPHMSARVLTTVGLMAWNKYGTKDVDPHKAAGEWSKSLDRTA*
Ga0075367_104017262	3300006178	Populus Endosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSK
Ga0075366_100023056	3300006195	Populus Endosphere	VKYNKDQWISSFEDAMVKLRPHMSARVLTTIGIMAWNKYGKNDVDPHKAAGDWSKSMSKPPQ*
Ga0075366_100047654	3300006195	Populus Endosphere	MKYNKDQWISSFEDAMVRLRPHMSARVLTTVGLMAWNKYGTKDVDPHKAAGEWSKSLDRTA*
Ga0075366_100485472	3300006195	Populus Endosphere	MKYNKDQWISSFEDAMVRLRPHMSARVLTTIGLMAWNKYGTKDVDPHKAAGEWSKSLDKPA*
Ga0075366_101156962	3300006195	Populus Endosphere	MKYNKDQWISSFEDAMVGLRPHMSARVLATICVMAWNRYGKNDVDPRKAAGEWSASMDKPK*
Ga0075366_101274783	3300006195	Populus Endosphere	MSMYNKDQWISSFEDAMVKLRPRMSARVLTTIGLMAWNKYGKNDVDPHEAAGVWSRSMDKPQ*
Ga0075366_105159533	3300006195	Populus Endosphere	MKYNKDQWISSFEDAMVKLRPHMSARVLTTIGLMAWNRYGLKDVDPHKAAGEWS
Ga0075366_108092132	3300006195	Populus Endosphere	WISSFEDVMVRLRPHISARVLTTISLMAWNKYGKNDVDPRKAAGEWSTSMDKPK*
Ga0097621_1000191851	3300006237	Miscanthus Rhizosphere	SSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK*
Ga0075370_101298004	3300006353	Populus Endosphere	SSFEDAMVRLRPHMSARVLTTVGLMAWNKYGTKDVDPHKAAGEWSKLLDKPA*
Ga0075370_103358032	3300006353	Populus Endosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHLAADEWSKTLDKPPARAR*
Ga0066665_114738101	3300006796	Soil	MKYNKDQWTSSFEDAMVGLRPHMTPRVLTTVALMAWHKYGTKDVDPKKAAQEWSKSMDKPA*
Ga0111539_117093233	3300009094	Populus Rhizosphere	MTYNKDQWISSFEDAMVKLRPHIGMRVLTTIGLMAWNQKGTKGVDPALAALDWSKSMEKSK*
Ga0105245_107212642	3300009098	Miscanthus Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHMTARILASICLMAWSQYGVKGTDPHQAARTWSASMDGSSTPRR*
Ga0105243_100157383	3300009148	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRMRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARAP*
Ga0111538_117716901	3300009156	Populus Rhizosphere	KYNKDQWISSFEDAMVKLRPHIGMRVLTTIGLMAWNQKGTKGVDPALAALDWSKSMEKSK
Ga0105248_112256112	3300009177	Switchgrass Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHMTARVLASICLMAWSQYGVKGTDPHQAARTWSATMDGSSTPRP*
Ga0105238_109471241	3300009551	Corn Rhizosphere	MYNKDQWISSFEDAMVTLRPHMSARVLASIALLAWNQYGRQQVEPKK
Ga0105238_111083312	3300009551	Corn Rhizosphere	VKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWHKHGTKDEDPKKVARDWSKAMDAKK*
Ga0105238_120468903	3300009551	Corn Rhizosphere	SSAARAMYNKDQWISSFEDAMVSLRPHMSARVLASIALLAWNRYGRKEVDPRQAATEWSRTMDAAD*
Ga0126307_107810341	3300009789	Serpentine Soil	SPAGAIKYNRDQWISSFEDAMVKLRPHMTMRVLTTIGLMAWNQNGTQGVDPALAALEWSQSMDKAQ*
Ga0150984_1038326861	3300012469	Avena Fatua Rhizosphere	MYNKDQWISSFEDAMVTLRPHMSARVLASIALLAWNRYGRQEVDPKKAATDWSNTMDAAK
Ga0136637_11871622	3300012526	Polar Desert Sand	MIYNKDQWISSFEDVILRLRPHLTARILQTITGMAWQRYGAKGQDPKSAAEEWSTSMDA*
Ga0137419_105573882	3300012925	Vadose Zone Soil	MKYNKDQWISSFEDVMVGLRPHMTARVLTSIALMAWHKYGTKDVDPKKAAGEWSKSMDKPA*
Ga0157370_117121462	3300013104	Corn Rhizosphere	MRVGLTAGRAMYNKDQWISSFEDAMVSLRPHMSARVLASIALLAWNRYGRKDVDPRQAATEWSRTMDAAN*
Ga0157374_112951422	3300013296	Miscanthus Rhizosphere	MTMKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKVK*
Ga0157378_107183524	3300013297	Miscanthus Rhizosphere	MDYNKDQWISSFEDAMVRLRPHMSARLLMTICLMAWNKYGKNDVDPHKAAGEWSKSMDKPS*
Ga0157378_110048601	3300013297	Miscanthus Rhizosphere	MKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKAK*
Ga0163162_108280182	3300013306	Switchgrass Rhizosphere	SSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASIDGSSPSGP*
Ga0157375_120626362	3300013308	Miscanthus Rhizosphere	MKYNKDQWTSSFEDAMVGLRPHMTTRVLTTVALMAWHKYGTKDVDPKKAAQEWSKSMDKPA*
Ga0157379_124884171	3300014968	Switchgrass Rhizosphere	NKDQWISSFEDAMVGLRPHMTGRVLTSIALMAWHKYGTKDVDPKKAAQEWSKSIDKPA*
Ga0157376_108721592	3300014969	Miscanthus Rhizosphere	MKPASAKYNKDQWISSFEDEMVRLRPHMTARVLASICLMAWSQYGVKGTDPHQAARAWSASMDQNKI*
Ga0173483_108208032	3300015077	Soil	LLHECSRVSALRVLRADIAAIAYNKDQWISSFEDAVVKLRPHITMCILTTIGLMAWNQKGTKGVDPALAALEWSKSWTSLK*
Ga0132258_108831011	3300015371	Arabidopsis Rhizosphere	VSYNKDQWISSFEDAMVKLRPHITMRILTTIGLMAWNQKGTKGVDPALAALEWSTSMDKTK*
Ga0132258_127319113	3300015371	Arabidopsis Rhizosphere	MPPAVTKYNKDQWISSFEDAMLKLRPHMTMRILTTIGLMAWNQKGTQGIDPARAAAEWSNSTDKK*
Ga0132256_1019384522	3300015372	Arabidopsis Rhizosphere	VNYNKDQWISSFEDAMVKLRPHITMRILTTIGLMAWNQKGTQGIDPARAAAEWSNSTDKK
Ga0132255_1023784662	3300015374	Arabidopsis Rhizosphere	MKYNKDQWTSSFEDAMVGLRPHMPARVLTTVALMAWHKYGTKDVDPRKAAEEWSKSMDKPAQRRDAWDA*
Ga0163161_1001572511	3300017792	Switchgrass Rhizosphere	DQWISSFEVAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQLAALEWSKSMDKAK
Ga0184611_10566491	3300018067	Groundwater Sediment	ADIAAIAYNKDQWISSFEDAVVKLRPHITMCILTTIGLMAWNQKGTKGVDPALAALEWSKSWTSLK
Ga0190272_118333882	3300018429	Soil	MKYNKDQWISSFEDAMLKLRPHMTVRILTTIGLMAWSQKGIQGIDPALAATEWSTSIDKS
Ga0190274_120594981	3300018476	Soil	WISSFEDAMVKLRPHIGLRVLTTIGLMAWTQKGTKGVDPALAALEWSQSMDKAK
Ga0190271_109315081	3300018481	Soil	VKFNKDQWISSFEDAMVKLRPHVTKRLLTTMGLIAWNQKGTKGVDPAPAALEWSNSMSKSSGPAR
Ga0066669_111521951	3300018482	Grasslands Soil	MKYNKDQWISSFEDAMVGLRPHMAARVLASIALMAWHKYGMKDVDPKKAAGEWSKSMDKP
Ga0190273_106755672	3300018920	Soil	VTYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGVDPQLAALEWSQSMDKA
Ga0190273_111882482	3300018920	Soil	MYNKDQWISSFEDWIVRLRPHTSSRLLATAGIMAWTRYGAKDVAPETAAREWSRTMDGHS
Ga0193753_102164343	3300020034	Soil	ADHGPEAAPRHHVKYNKDQWISTFEDTMVRLRPHMSARVLATVGLMAWNKFGKQDIDPHEAARDWSKSMDRPA
Ga0247765_11075272	3300023268	Plant Litter	MYNKDQWISSFEDAMVTLRPHMSARVLASIALLAWNRYGRKEVDPRQAATEWSRTMDAAN
Ga0179589_101746572	3300024288	Vadose Zone Soil	VKYNKDQWISSFEDTMVRLRPHTSARVLATVGLMAWNKFGKNDIDPHEAARDWSKSMGRP
Ga0207656_101434354	3300025321	Corn Rhizosphere	AAAPAPQVYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQLAALEWSKSMDKVK
Ga0207682_101348053	3300025893	Miscanthus Rhizosphere	VIYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGVDPALAALEWSQSMDKA
Ga0207682_102172822	3300025893	Miscanthus Rhizosphere	VKYNKDQWISSFEDAMVKLRPHITMRILTTIGLMAWNQKGTKGVDPALAALEWS
Ga0207642_106151362	3300025899	Miscanthus Rhizosphere	MKYNKDQWLSSFEDAMLRLRPHMTMRILTTIGLMAWNQKGTKGVDPAQAALEWSNSMDKS
Ga0207642_106447222	3300025899	Miscanthus Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHITARVLASICLMAWSQYGVRGADPHQAARTWSATMDGSSTPRP
Ga0207645_100421884	3300025907	Miscanthus Rhizosphere	MKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKV
Ga0207645_100957573	3300025907	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARVR
Ga0207649_115863452	3300025920	Corn Rhizosphere	ERRCVAESRGHAPTVKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWHKHGTKDEDPKKAARDWSKAMDAKK
Ga0207681_108073572	3300025923	Switchgrass Rhizosphere	MYNKDQWISSFEDAMVTLRPHMSARVLASIALLAWNRYGRQEVDPKEAATDWSNTMDAAK
Ga0207650_101737182	3300025925	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASIDGSSPSGP
Ga0207650_105353742	3300025925	Switchgrass Rhizosphere	VKYNKDQWIFSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGVDPAIAALEWSKSMEKA
Ga0207650_112170032	3300025925	Switchgrass Rhizosphere	MSMYNKDQWISSFEDAMVKLRPRMSARVLTTIGLMAWNKYGKNDVDPHEAAGAWSRSMDKPA
Ga0207701_113581932	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTQYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQLAALEWSNSMDRSK
Ga0207644_108241922	3300025931	Switchgrass Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTWSASMDGSSPSGP
Ga0207690_100881922	3300025932	Corn Rhizosphere	VKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWDKHGTKDEDPKKAARDWSKAMDAK
Ga0207706_105302432	3300025933	Corn Rhizosphere	MKYNKDQWISSFEDAMVRLRPRMSARVLTTIGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARAP
Ga0207709_100186442	3300025935	Miscanthus Rhizosphere	MKYNKDQWISSFEDAMVRMRPRMSARVLTTVGLMAWNRYGTKDVDPHQAADEWSKTLDKPPARAP
Ga0207691_115854032	3300025940	Miscanthus Rhizosphere	MKPTAAKYNKDQWISSFEDEMLRLRPHMTARILASICLMAWSRYGVNGTDPHQAARTSSASMDGSSPSGP
Ga0207711_118013091	3300025941	Switchgrass Rhizosphere	PQVYNKDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQLAALEWSKSMDKAK
Ga0207712_101879662	3300025961	Switchgrass Rhizosphere	MKYNKDQWISSFEDAMVKLRPHMSARVLTTIGLMAWNRYGKNDVDPHKAAGEWSKSMDKP
Ga0207658_109793823	3300025986	Switchgrass Rhizosphere	CVAESRGHAPTVKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWHKHGTKDEDPKKAARDWSKAMDAKK
Ga0207677_121443482	3300026023	Miscanthus Rhizosphere	MKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGVDPALAALEWSQSMDKA
Ga0207639_109881571	3300026041	Corn Rhizosphere	MYNKDQWISSFEDAMVSLRPHMSARVLASIALLAWNRYGRKDVDPRQAATEWSRTMDAAD
Ga0207648_100944893	3300026089	Miscanthus Rhizosphere	MKYNKDQWLSSFEDAMLRLRPHMTMRILTTIGLMAWSQKGTQDIDPALAAAEWSKSMDEK
Ga0207676_117263283	3300026095	Switchgrass Rhizosphere	VTQYNKDQWISSFEDAMVQLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK
Ga0209813_104538322	3300027866	Populus Endosphere	NKDQWISSFEDAMVRLRPHMSARVLTTIGLMAWNKYGTKDVDPHKAAGEWSKLLDKPA
Ga0209023_100212832	3300027870	Freshwater And Sediment	MTTTPRKHNKDQWISSFEDEMLRLRPHMSARVLASIGLMAWSRYGTAGSAPYDAARRWSESMDRESR
Ga0207428_112902472	3300027907	Populus Rhizosphere	HAPTVKYNKDQWISSFEDEMVKLRPHMAARVLVSIGLMAWHKHGTKDEDPKKAARDWSKAMDAKK
Ga0268266_104250672	3300028379	Switchgrass Rhizosphere	MKPTAAKYNKDQWVSSFEDEMVRLRPHMTARVLASICLMAWSQYGVRGADPHQAARTWSATMDGSSTPRP
Ga0268264_107356622	3300028381	Switchgrass Rhizosphere	MKYNKDQWISSFEDAMVRLRPHMSARVLATVGLMAWNKYGTKDVDPHEAAGEWSKLLDKP
Ga0137415_109234831	3300028536	Vadose Zone Soil	MKYNKDQWISSFEDAMVGLRPHMPARVLTSIALMAWNQFGKKDVDPKQAADDWSKSMRSP
Ga0307297_101211393	3300028754	Soil	KDQWISSFEDAMVKLRPHMGLRVLTTIGLMAWNQKGTKGIDPQIAALEWSQSMDKAK
Ga0307517_101109471	3300028786	Ectomycorrhiza	MKPTAAKYNKDQWVSSFEDEMLRLRPHMTARVLASVCLLAWSQYGVKGTDPHQAARTW
Ga0307517_101735172	3300028786	Ectomycorrhiza	MKYNKDQWISSFEDAMVRLRPHMSARVLTTIGLMAWNKYGTKDVDPHKAAGEWSKSLDKP
Ga0307515_1005603510	3300028794	Ectomycorrhiza	MKYNKDQWISSFEDTMVRLRPHMSARVLATVGLMAWNKFGKKDIDPHEAARDWSKSMDRP
Ga0307314_103093611	3300028872	Soil	MKYNKDQWISSFEDAILKLRPHMTMRILTTIGLMAWNKKGTQGIDPALAALEWSQSMDKA
Ga0307516_103241872	3300031730	Ectomycorrhiza	MKYNKDQWISSFEDAMVTLRPHISARVLATICLMAWNKYGAKDVDPTKAAGEWSKSMDKP
Ga0307405_106657402	3300031731	Rhizosphere	MKYNKDQWISSFEDAVIKLWPHVSMRVLTTVGLMAWSSKGTKGVDPALAALEWSQSVDKA
Ga0307410_121290141	3300031852	Rhizosphere	MPSKKSPVRVTPNVQTYNKDQWISSFEDAVVKLRPHVSMRVLTTVGLMAWNSKGTKGVDPALTALEWSQSVDKAR
Ga0307407_115088061	3300031903	Rhizosphere	MPSKKSPVRVTPNVQTYNKDQWISSFEDAVIKLRPHVSMRVLTTVGLMAWNSKGTKGVDPALAALEWSQSVDKAR
Ga0307415_1019814382	3300032126	Rhizosphere	VPGKPQTYNKDQWISSFKEAVIKLRPHVSMKLLTTVGLMAWNSKGTKGVDSALAALEWSQSVDKTKWAFRS
Ga0307510_101923384	3300033180	Ectomycorrhiza	MKYNKDQWISSFEDAMVRLRPHMSARVLATVGLMAWNRFGKHDIDPHEAARDWSKSMDRP
Ga0307510_102916062	3300033180	Ectomycorrhiza	MKYNKDQWISSFEDAMVRLRPHMSPRVLATVGLMAWNRFGKNDIDPHEAARDWSKSMDRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064891

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences