Metagenome / Metatranscriptome Family F064874

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064874
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	42 residues
Representative Sequence	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP
Number of Associated Samples	66
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.41 %
% of genes near scaffold ends (potentially truncated)	92.97 %
% of genes from short scaffolds (< 2000 bps)	91.41 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.250 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (32.812 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.438 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00872	Transposase_mut	2.34
PF04392	ABC_sub_bind	2.34
PF00106	adh_short	1.56
PF02627	CMD	1.56
PF13359	DDE_Tnp_4	1.56
PF06508	QueC	1.56
PF03050	DDE_Tnp_IS66	1.56
PF01609	DDE_Tnp_1	1.56
PF13358	DDE_3	1.56
PF13613	HTH_Tnp_4	0.78
PF00924	MS_channel	0.78
PF02796	HTH_7	0.78
PF05057	DUF676	0.78
PF13271	DUF4062	0.78
PF00691	OmpA	0.78
PF10134	RPA	0.78
PF12762	DDE_Tnp_IS1595	0.78
PF10282	Lactonase	0.78
PF12704	MacB_PCD	0.78
PF08241	Methyltransf_11	0.78
PF00884	Sulfatase	0.78
PF03683	UPF0175	0.78
PF13524	Glyco_trans_1_2	0.78
PF13614	AAA_31	0.78
PF13551	HTH_29	0.78
PF13005	zf-IS66	0.78
PF00589	Phage_integrase	0.78
PF00264	Tyrosinase	0.78
PF08388	GIIM	0.78
PF13518	HTH_28	0.78
PF02371	Transposase_20	0.78
PF13586	DDE_Tnp_1_2	0.78
PF13612	DDE_Tnp_1_3	0.78
PF14104	DUF4277	0.78
PF13592	HTH_33	0.78
PF13730	HTH_36	0.78
PF09344	Cas_CT1975	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.34
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	1.56
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.56
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.56
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.56
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.56
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.56
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.56
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.56
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.56
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.56
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	1.56
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.56
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.56
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.56
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.56
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.56
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	1.56
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.56
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.78
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
All Organisms	root	All Organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
cellular organisms	root	All Organisms → cellular organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.34 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.12 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.12 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.34 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.56 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	1.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.56 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.12 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.34 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.56 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.56 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.56 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.56 %
Azonexaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.56 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.78 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.78 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.78 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.78 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.56 %
Ferribacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Ferribacterium	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.56 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.78 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.78 %
Scytonemataceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae	0.78 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.78 %
Thiocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis	0.78 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.78 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.78 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Ferribacterium limneticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Ferribacterium → Ferribacterium limneticum	1.56 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.56 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.78 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.78 %
Phormidesmis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis	0.78 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.78 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.78 %
Thiocystis violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	0.78 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.78 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Ferribacterium limneticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Ferribacterium → Ferribacterium limneticum	1.56 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.56 %
Phormidesmis priestleyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis → Phormidesmis priestleyi	0.78 %
Scytonema tolypothrichoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides	0.78 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.78 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.78 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.78 %
Thiocystis violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	0.78 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.78 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111006\|2214758282	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	850	Open in IMG/M
3300005289\|Ga0065704_10342423	Not Available	821	Open in IMG/M
3300005294\|Ga0065705_10152783	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300005294\|Ga0065705_10700303	Not Available	653	Open in IMG/M
3300005294\|Ga0065705_11142376	Not Available	507	Open in IMG/M
3300005295\|Ga0065707_10883596	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005332\|Ga0066388_100865862	Not Available	1487	Open in IMG/M
3300005332\|Ga0066388_101171376	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300005332\|Ga0066388_101463593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1192	Open in IMG/M
3300005332\|Ga0066388_103438397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300005332\|Ga0066388_107140945	Not Available	562	Open in IMG/M
3300005332\|Ga0066388_107706395	Not Available	539	Open in IMG/M
3300005332\|Ga0066388_108758581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300005447\|Ga0066689_10832427	Not Available	573	Open in IMG/M
3300005552\|Ga0066701_10149138	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300005552\|Ga0066701_10825492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	551	Open in IMG/M
3300005558\|Ga0066698_10948187	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005562\|Ga0058697_10093280	Not Available	1236	Open in IMG/M
3300005562\|Ga0058697_10274352	Not Available	795	Open in IMG/M
3300005562\|Ga0058697_10336667	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005562\|Ga0058697_10400198	Not Available	680	Open in IMG/M
3300005562\|Ga0058697_10629506	Not Available	563	Open in IMG/M
3300005568\|Ga0066703_10701606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	582	Open in IMG/M
3300005764\|Ga0066903_100156693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Ferribacterium → Ferribacterium limneticum	3289	Open in IMG/M
3300005764\|Ga0066903_100761378	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005764\|Ga0066903_101127139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	1449	Open in IMG/M
3300005764\|Ga0066903_101470719	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005764\|Ga0066903_103388492	Not Available	860	Open in IMG/M
3300005764\|Ga0066903_104099414	Not Available	780	Open in IMG/M
3300005764\|Ga0066903_104299050	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005764\|Ga0066903_104443412	Not Available	748	Open in IMG/M
3300005764\|Ga0066903_104766158	Not Available	721	Open in IMG/M
3300005764\|Ga0066903_107099940	Not Available	580	Open in IMG/M
3300005764\|Ga0066903_107774625	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005764\|Ga0066903_108977182	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006032\|Ga0066696_10126692	Not Available	1568	Open in IMG/M
3300006049\|Ga0075417_10085316	Not Available	1415	Open in IMG/M
3300006049\|Ga0075417_10090192	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300006049\|Ga0075417_10093370	Not Available	1357	Open in IMG/M
3300006049\|Ga0075417_10170363	Not Available	1020	Open in IMG/M
3300006049\|Ga0075417_10477249	Not Available	624	Open in IMG/M
3300006049\|Ga0075417_10510994	Not Available	604	Open in IMG/M
3300006058\|Ga0075432_10175129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	836	Open in IMG/M
3300006194\|Ga0075427_10004815	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300006194\|Ga0075427_10009284	Not Available	1464	Open in IMG/M
3300006194\|Ga0075427_10031275	Not Available	874	Open in IMG/M
3300006194\|Ga0075427_10036573	Not Available	818	Open in IMG/M
3300006844\|Ga0075428_100161204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2434	Open in IMG/M
3300006844\|Ga0075428_100254110	Not Available	1893	Open in IMG/M
3300006844\|Ga0075428_100257069	Not Available	1881	Open in IMG/M
3300006844\|Ga0075428_100358894	Not Available	1563	Open in IMG/M
3300006844\|Ga0075428_100384132	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300006844\|Ga0075428_100521962	Not Available	1270	Open in IMG/M
3300006844\|Ga0075428_102116601	Not Available	582	Open in IMG/M
3300006844\|Ga0075428_102209832	Not Available	567	Open in IMG/M
3300006845\|Ga0075421_100263290	Not Available	2109	Open in IMG/M
3300006845\|Ga0075421_100455050	Not Available	1528	Open in IMG/M
3300006845\|Ga0075421_100577494	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1324	Open in IMG/M
3300006845\|Ga0075421_100627873	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300006845\|Ga0075421_100980249	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300006846\|Ga0075430_100130980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2090	Open in IMG/M
3300006846\|Ga0075430_101119193	Not Available	648	Open in IMG/M
3300006846\|Ga0075430_101207581	Not Available	622	Open in IMG/M
3300006846\|Ga0075430_101602807	Not Available	534	Open in IMG/M
3300006847\|Ga0075431_100950987	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006847\|Ga0075431_101177373	Not Available	730	Open in IMG/M
3300006847\|Ga0075431_101415999	Not Available	654	Open in IMG/M
3300006852\|Ga0075433_10255773	Not Available	1553	Open in IMG/M
3300006871\|Ga0075434_101803963	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006880\|Ga0075429_100450688	Not Available	1127	Open in IMG/M
3300006880\|Ga0075429_100617871	Not Available	950	Open in IMG/M
3300006904\|Ga0075424_102067624	Not Available	600	Open in IMG/M
3300006969\|Ga0075419_10080488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2073	Open in IMG/M
3300006969\|Ga0075419_10098873	Not Available	1874	Open in IMG/M
3300006969\|Ga0075419_10620338	Not Available	761	Open in IMG/M
3300009038\|Ga0099829_10791001	Not Available	788	Open in IMG/M
3300009090\|Ga0099827_11521061	Not Available	583	Open in IMG/M
3300009100\|Ga0075418_10102911	Not Available	3031	Open in IMG/M
3300009100\|Ga0075418_11305432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Ferribacterium → Ferribacterium limneticum	787	Open in IMG/M
3300009147\|Ga0114129_11991668	Not Available	702	Open in IMG/M
3300010047\|Ga0126382_10544786	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300010145\|Ga0126321_1229865	Not Available	898	Open in IMG/M
3300010398\|Ga0126383_13049921	Not Available	547	Open in IMG/M
3300012199\|Ga0137383_10027147	All Organisms → cellular organisms → Bacteria → Proteobacteria	4002	Open in IMG/M
3300012210\|Ga0137378_10904994	Not Available	795	Open in IMG/M
3300012212\|Ga0150985_101569672	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1397	Open in IMG/M
3300012351\|Ga0137386_11198728	Not Available	531	Open in IMG/M
3300012469\|Ga0150984_112653882	Not Available	656	Open in IMG/M
3300012961\|Ga0164302_11126524	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012971\|Ga0126369_10271352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1681	Open in IMG/M
3300015371\|Ga0132258_11803445	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300015372\|Ga0132256_100011312	All Organisms → cellular organisms → Bacteria	7739	Open in IMG/M
3300015374\|Ga0132255_100009110	All Organisms → cellular organisms → Bacteria	11514	Open in IMG/M
3300015374\|Ga0132255_100897633	Not Available	1325	Open in IMG/M
3300015374\|Ga0132255_100997656	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300015374\|Ga0132255_102067014	Not Available	868	Open in IMG/M
3300015374\|Ga0132255_106145891	Not Available	508	Open in IMG/M
3300016319\|Ga0182033_10202946	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1578	Open in IMG/M
3300016319\|Ga0182033_11387094	Not Available	633	Open in IMG/M
3300016319\|Ga0182033_11813834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300016371\|Ga0182034_10295915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1295	Open in IMG/M
3300016404\|Ga0182037_11998823	Not Available	520	Open in IMG/M
3300016422\|Ga0182039_11028052	Not Available	740	Open in IMG/M
3300026312\|Ga0209153_1047707	Not Available	1511	Open in IMG/M
3300026323\|Ga0209472_1072926	Not Available	1412	Open in IMG/M
3300027874\|Ga0209465_10032563	Not Available	2459	Open in IMG/M
3300028587\|Ga0247828_10432524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	766	Open in IMG/M
3300028587\|Ga0247828_11233499	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031572\|Ga0318515_10078401	Not Available	1709	Open in IMG/M
3300031681\|Ga0318572_10587330	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	664	Open in IMG/M
3300031682\|Ga0318560_10313523	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031748\|Ga0318492_10101460	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300031793\|Ga0318548_10354406	Not Available	720	Open in IMG/M
3300031798\|Ga0318523_10356437	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031833\|Ga0310917_10330939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1032	Open in IMG/M
3300031912\|Ga0306921_11076828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	902	Open in IMG/M
3300031941\|Ga0310912_10949825	Not Available	660	Open in IMG/M
3300031947\|Ga0310909_10155474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema tolypothrichoides	1883	Open in IMG/M
3300031995\|Ga0307409_100229222	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300031995\|Ga0307409_101368667	Not Available	734	Open in IMG/M
3300032054\|Ga0318570_10540408	Not Available	532	Open in IMG/M
3300032060\|Ga0318505_10295240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	764	Open in IMG/M
3300032065\|Ga0318513_10630646	Not Available	525	Open in IMG/M
3300032180\|Ga0307471_101738492	Not Available	777	Open in IMG/M
3300032261\|Ga0306920_104325651	Not Available	510	Open in IMG/M
3300032261\|Ga0306920_104380735	Not Available	506	Open in IMG/M
3300034678\|Ga0314803_016774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis → Phormidesmis priestleyi	1048	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.12%
Host-Associated	Host-Associated	46.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.34%
Plants	Host-Associated → Plants	46.88%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.03%
Phylloplane	Host-Associated → Plants → Phylloplane	3.91%
Freshwater	Environmental → Aquatic → Freshwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.38%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.03%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	32.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.91%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2213772827	2209111006	Arabidopsis Rhizosphere	GQQMMPNNVGYALKAGQLTYDYRYSTMHGMPVTGGRGFRGLKPLRHNSVPP
Ga0065704_103424232	3300005289	Switchgrass Rhizosphere	GYALKAGQLTYDCRYSTIHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0065705_101527834	3300005294	Switchgrass Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP*
Ga0065705_107003031	3300005294	Switchgrass Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGCGFRGLKPLWYNGVPP*
Ga0065705_111423762	3300005294	Switchgrass Rhizosphere	LYILFDGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNG
Ga0065707_108835961	3300005295	Switchgrass Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVIGGRGFRGLKPLWYNGVPP*
Ga0066388_1008658621	3300005332	Tropical Forest Soil	GYLLKVGQLEYDCRYSKMHDMPVTGGRSFRSLKPLWYKGVPP*
Ga0066388_1011713761	3300005332	Tropical Forest Soil	MGPKTGGPGYALKAGQLTYDCRYSTMHGMPVTGGCGFRGLKPLWYNG
Ga0066388_1014635934	3300005332	Tropical Forest Soil	LKAGQWTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0066388_1034383973	3300005332	Tropical Forest Soil	GYPLKAGQLTYDCRYSTMHGMPVTGSRGFRGLKPLWYNGVPP*
Ga0066388_1069517341	3300005332	Tropical Forest Soil	MEPLSPIARGEITGYALKAGQLTYDCRYSTMHGMPVTGGCGFRGLKPLWYNG
Ga0066388_1071409451	3300005332	Tropical Forest Soil	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP*
Ga0066388_1077063951	3300005332	Tropical Forest Soil	GYPLKAGQLGYDCRYSKMHGMPVTGGRGFRGLKPWWYNSVPP*
Ga0066388_1087585812	3300005332	Tropical Forest Soil	LKVGQLEYDCRYSKMYGMPVAGGRGFSALKPLWYKGVPP*
Ga0066689_108324272	3300005447	Soil	GYPLKAGQLEYDRRYSKMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0066701_101491384	3300005552	Soil	MSTHHGYPLKAGQLEYDRRYSKMHGMPVTGGRGFRGLKPLWYNGV
Ga0066701_108254923	3300005552	Soil	QLEYDRRYSKMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0066698_109481872	3300005558	Soil	MSTHHGYPLKAGQLEYDRRYSKMHGMPVTGGRGFRG
Ga0058697_100932801	3300005562	Agave	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRALKPLWYNGVPP*
Ga0058697_102743523	3300005562	Agave	MLTERALGQTGYPLKAGQLTYDCRYSTMHGIPVTGGRGFRGLKPLWYNSVPP*
Ga0058697_103366673	3300005562	Agave	VHGALGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPL
Ga0058697_104001981	3300005562	Agave	AGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP*
Ga0058697_106295061	3300005562	Agave	LKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0066703_107016061	3300005568	Soil	EGYPLKAGQLEYDCRYSKMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0066903_1001566931	3300005764	Tropical Forest Soil	QLEYDCRYSKMHGMPVTGGRGFRSLKPLWYKGVPP*
Ga0066903_1007613783	3300005764	Tropical Forest Soil	GYALKAGQLTYDCRYSTMHGMPVTGGHGFRGLKPLWYNGVPP*
Ga0066903_1011271391	3300005764	Tropical Forest Soil	VFPGYLLKPGQLEYDCRYSTMHGMPVTGGRGFRSLKPLWYNGV
Ga0066903_1014707193	3300005764	Tropical Forest Soil	GYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYHSVPP*
Ga0066903_1033884921	3300005764	Tropical Forest Soil	KAGQLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP*
Ga0066903_1040994141	3300005764	Tropical Forest Soil	MNTGGGPPEGYALKAGQLTYDCRYSTMHGMPVTGGHGFRGLKPLWYNGV
Ga0066903_1042990501	3300005764	Tropical Forest Soil	GYLLKVGQLEYDCRYSKMHGMPVTGGRSFRSLKPLWYKGVPP*
Ga0066903_1044434121	3300005764	Tropical Forest Soil	GYLLKAGQLEYDCRYSTMHGMPVTGGRGFRGLKPWWYNGVPP*
Ga0066903_1047661582	3300005764	Tropical Forest Soil	MGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRGLKPWWYNGVPA*
Ga0066903_1070999401	3300005764	Tropical Forest Soil	LEYDCRYSKMHGMPVTGGRGFRALKPLWYKGVPP*
Ga0066903_1077746251	3300005764	Tropical Forest Soil	LLAGSGYLLKPGQLEYDCRYSTMHGMPVTGGRGFRSLKPLWYNGV
Ga0066903_1089771821	3300005764	Tropical Forest Soil	LRVRGYALKAGQLTYDCHYSAMHGMPVTGGRGFRSLKPLWYNG
Ga0066696_101266923	3300006032	Soil	YALKAGQLTYDCRYSTMHGMPVTGGRGFRDLKPLWYNGVPP*
Ga0075417_100853161	3300006049	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP*
Ga0075417_100901921	3300006049	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGGRGFRGLKPLWDNGVPP*
Ga0075417_100933701	3300006049	Populus Rhizosphere	LTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075417_101703631	3300006049	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGGRGFRGLKPFWYNGVPP*
Ga0075417_104772491	3300006049	Populus Rhizosphere	MGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVP
Ga0075417_105109942	3300006049	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075432_101751293	3300006058	Populus Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWDNGVPP*
Ga0075427_100048151	3300006194	Populus Rhizosphere	VCISAGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWDNG
Ga0075427_100092841	3300006194	Populus Rhizosphere	VVIDIWESAHPGYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYN
Ga0075427_100312752	3300006194	Populus Rhizosphere	MGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP*
Ga0075427_100365731	3300006194	Populus Rhizosphere	MGSYSQWGYVLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075428_1001612041	3300006844	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGRRGFRGLKLLWYNGVPP*
Ga0075428_1002541104	3300006844	Populus Rhizosphere	LTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP*
Ga0075428_1002570694	3300006844	Populus Rhizosphere	MGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP
Ga0075428_1003588941	3300006844	Populus Rhizosphere	EGYALKAGQLTYDCRYSTMHGIPVTGGRGFRGLKPLWYKASQEQ*
Ga0075428_1003841325	3300006844	Populus Rhizosphere	YPTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075428_1005219621	3300006844	Populus Rhizosphere	LTYDCRYSTMHGMPVTGGRGFRGLKPFWYNGVPP*
Ga0075428_1021166012	3300006844	Populus Rhizosphere	QGYALKAGQLTYDCRYSTMHGMSVIGGRGFRGLKSLWYNGVPH*
Ga0075428_1022098321	3300006844	Populus Rhizosphere	QLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP*
Ga0075421_1002632904	3300006845	Populus Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRVLKPLWYNGVPP*
Ga0075421_1004550501	3300006845	Populus Rhizosphere	VVIDIWESAHPGYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLW
Ga0075421_1005774942	3300006845	Populus Rhizosphere	GYALKAGQLTYDCRYSTTHGMPVTGGRGFRGLKSLWYNGVPP*
Ga0075421_1006278731	3300006845	Populus Rhizosphere	IGYALKAGQLTYDCRYSTIHSMLVTGGHGFRGLKPLWYKGVPP*
Ga0075421_1009802492	3300006845	Populus Rhizosphere	MLSAGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPFWYNGV
Ga0075430_1001309803	3300006846	Populus Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPFWYNGVPP*
Ga0075430_1011191931	3300006846	Populus Rhizosphere	VCISAGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGL
Ga0075430_1012075811	3300006846	Populus Rhizosphere	AGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075430_1016028072	3300006846	Populus Rhizosphere	LTYDCRYSTMHGMPVTGGRGFRGLKPLWDNGVPP*
Ga0075431_1009509871	3300006847	Populus Rhizosphere	VGAGRPHATGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNG
Ga0075431_1011773732	3300006847	Populus Rhizosphere	GYALKAGQLTYDCRYSTMHGMPVTGGSGFRGLKPLWYNGVPP*
Ga0075431_1014159992	3300006847	Populus Rhizosphere	PTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075433_102557731	3300006852	Populus Rhizosphere	VVIDIWESAHPGYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVP
Ga0075434_1018039631	3300006871	Populus Rhizosphere	MALRVSGYALKAGQLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGV
Ga0075429_1004506881	3300006880	Populus Rhizosphere	LKAGQLTYDCRYSTMHGMPVTGGRGFGGLKPLWYNSVPP*
Ga0075429_1006178712	3300006880	Populus Rhizosphere	GYALKAGQLTYDCRYSTMHGMPGTGGRGFRSLKPLWYNSVPP*
Ga0075424_1020676241	3300006904	Populus Rhizosphere	VCISAGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWDNGV
Ga0075419_100804883	3300006969	Populus Rhizosphere	GQLTYDCRYSTMHGMPVTGGRGFRGLKPFWYNGVPP*
Ga0075419_100988731	3300006969	Populus Rhizosphere	GQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP*
Ga0075419_106203381	3300006969	Populus Rhizosphere	RQLTYDCRYSTMHGMPVTGRRGFRGLKLLWYNGVPP*
Ga0099829_107910011	3300009038	Vadose Zone Soil	LEYDYRYSKMHGMPVTGGRGLRGLKPLWYNGVPP*
Ga0099827_115210611	3300009090	Vadose Zone Soil	GQLEYDRRYSKMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0075418_101029115	3300009100	Populus Rhizosphere	KAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYKASQEQ*
Ga0075418_113054321	3300009100	Populus Rhizosphere	SGAALTYVSFEGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0114129_119916681	3300009147	Populus Rhizosphere	GQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0126382_105447862	3300010047	Tropical Forest Soil	GYALKAGQLTYDCRYSTMHGMPVTDGRGFRGLQPLWYNGVSP*
Ga0126321_12298651	3300010145	Soil	GQLTYDCRYSTMHGMPVTGGRGFRGLKALWYNGVPP*
Ga0126383_130499211	3300010398	Tropical Forest Soil	VGQLEYDCRYSKMHGMPVTGGRGFRALKSLWYKGVPP*
Ga0137383_100271473	3300012199	Vadose Zone Soil	MSTHHGYPLKAGQLEYDRRYSKMHGMPVTGGHSFRGLKPLWYNGVPP*
Ga0137378_109049941	3300012210	Vadose Zone Soil	AGQLEYDCRYSKMHGIPVTGGRGFRGLKPLWYNGVPP*
Ga0150985_1015696722	3300012212	Avena Fatua Rhizosphere	MPDVLTGYLLKVGQLEYDCRYSKMPGMPVTGGRGFRSLKPLWYKGVPP*
Ga0137386_111987281	3300012351	Vadose Zone Soil	QAGQLEYDCRYAKMHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0150984_1126538821	3300012469	Avena Fatua Rhizosphere	MCVSLGYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYN
Ga0164302_111265242	3300012961	Soil	VSRAKWLPETGYPLKAGQLEYDCRYSTMHGMPVTGGRGFRGLKPLWYNGV
Ga0126369_102713522	3300012971	Tropical Forest Soil	GYALKAGQLTYDCRYSTMHDMPVTGGHGFRGLKPLWYNGVPP*
Ga0132258_118034453	3300015371	Arabidopsis Rhizosphere	QLEYDCRYSTMHGMPVTGGRGFRDLKPLGYKGVPP*
Ga0132256_10001131210	3300015372	Arabidopsis Rhizosphere	MLYSGLSGYALKAGQLTYDYRYSTMHGMPVTGGRGFRGLKPLRHNSV
Ga0132255_1000091101	3300015374	Arabidopsis Rhizosphere	MLYSGLSGYALKAGQLTYDYRYSTMHGMPVTGGRGFRGLKPLRHNSVP
Ga0132255_1008976332	3300015374	Arabidopsis Rhizosphere	GYALKAGQLTYDYRYSTMHGMPVTGGRGFRGLKPLRHNSVPP*
Ga0132255_1009976561	3300015374	Arabidopsis Rhizosphere	GQLEYDCRYSTMHGMPVTGGRGFRDLKPLGYKGVPP*
Ga0132255_1020670141	3300015374	Arabidopsis Rhizosphere	GQWTYDCRYSTIHGMPVTGGRGFRGLKPLWYNGVPP*
Ga0132255_1061458912	3300015374	Arabidopsis Rhizosphere	FEEAGYALKAGQLTYDYRYSTMHGMPVTGGRGFRALKPLRHNSVPP*
Ga0182033_102029461	3300016319	Soil	TDIVRHLKNGYPLKVGQLEYDCRYSKMYGMPVAGGRGFSALKPLWNNGVPP
Ga0182033_113870943	3300016319	Soil	PQLGYLLEVGQLEYDCRYSKMHGMPVTGGRGFRSLKPLWYNGVPP
Ga0182033_118138341	3300016319	Soil	MGTGGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLL
Ga0182034_102959153	3300016371	Soil	MCLCVVSRSAGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGV
Ga0182037_119988231	3300016404	Soil	GQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0182039_110280521	3300016422	Soil	MCLCVVSRSAGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKG
Ga0209153_10477071	3300026312	Soil	KMGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGIPP
Ga0209472_10729262	3300026323	Soil	EGYPLKAGQLEYDCRYSRMHDMPFTGRRGFRGLKPL
Ga0209465_100325631	3300027874	Tropical Forest Soil	MNGFIGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSLKPLWYKGVPP
Ga0247828_104325241	3300028587	Soil	MDVQWGIPPQPEHFDHGYPLKAGQLTYDCHYSTMHGMPVTGGRGFRGLKPLW
Ga0247828_112334991	3300028587	Soil	AGQLEYDCHYSKMHGMPVTGGRSFRGLKPLWYNGVPP
Ga0318515_100784011	3300031572	Soil	FIKFLLVRGGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSLKSLWYNGVPP
Ga0318572_105873301	3300031681	Soil	AGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0318560_103135231	3300031682	Soil	CLFLWLMRGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSLKPLWYKGVPP
Ga0318492_101014601	3300031748	Soil	MVRYGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSLKPLW
Ga0318548_103544061	3300031793	Soil	MVFLGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVP
Ga0318523_103564372	3300031798	Soil	SGKAVAGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0310917_103309392	3300031833	Soil	ADVGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0306921_110768283	3300031912	Soil	GHVGQIEGYALKAGQLTYDCRYSTMHGMPVTGGRGFRSLKPLWYNGVPP
Ga0310912_109498251	3300031941	Soil	MCLCVVSRSAGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVP
Ga0310909_101554741	3300031947	Soil	KAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0307409_1002292225	3300031995	Rhizosphere	GYPLKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNSVPP
Ga0307409_1013686672	3300031995	Rhizosphere	LKAGQLEYDCRYSTMHGMPVTGSRGFRGLQPLWYNGVQP
Ga0318570_105404081	3300032054	Soil	PHPEVMQGGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0318505_102952402	3300032060	Soil	GTVDVSGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSVKLLWYKGVPP
Ga0318513_106306462	3300032065	Soil	IGVEAHVGYLLKAGQLEYDCRYSKMHGMPVTGGRGFRSLKPLWYKGVPP
Ga0307471_1017384921	3300032180	Hardwood Forest Soil	LKAGQLEYDCRYSKMHGMPVTGGRGFRGLKPWWYNGVPA
Ga0306920_1043256512	3300032261	Soil	MGLGYALKAGQLTYDCRYSTMHGMPVTGGRGFRGLKPLWYNGV
Ga0306920_1043807351	3300032261	Soil	ARVFQKLKLGYLLKVGQLEYDCRYSKMHGMPVTSGRGFRSLKPL
Ga0314803_016774_3_149	3300034678	Soil	LIMEFLGYALKAEQLTYDCRYSTMHGMLVTGGRGFRVLKPLWYNGVPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences