Metagenome / Metatranscriptome Family F064873

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064873
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	118 residues
Representative Sequence	MPPAKRRVVAVQPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPQGPDEPAVPVRRRRTRARPPAR
Number of Associated Samples	113
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.25 %
% of genes near scaffold ends (potentially truncated)	21.09 %
% of genes from short scaffolds (< 2000 bps)	86.72 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.062 % of family members)
Environment Ontology (ENVO)	Unclassified (21.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.57% β-sheet: 0.00% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00589	Phage_integrase	35.16
PF02899	Phage_int_SAM_1	10.94
PF01609	DDE_Tnp_1	0.78
PF13586	DDE_Tnp_1_2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	10.94
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	10.94
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.25 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.34 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.56 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	0.78 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.34 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	1.56 %
Candidatus Troglogloeales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales	0.78 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	0.78 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.56 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	1.56 %
candidate division Zixibacteria bacterium SM23_81	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM23_81	0.78 %
Candidatus Manganitrophaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales → Candidatus Manganitrophaceae	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	1.56 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.78 %
Candidatus Manganitrophus	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales → Candidatus Manganitrophaceae → Candidatus Manganitrophus	0.78 %
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.78 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.78 %
candidate division Zixibacteria bacterium SM23_81	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM23_81	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
unclassified Candidatus Contendobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter	1.56 %
Candidatus Manganitrophus noduliformans	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales → Candidatus Manganitrophaceae → Candidatus Manganitrophus → Candidatus Manganitrophus noduliformans	0.78 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.78 %
Desulfofustis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis	0.78 %
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	0.78 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.78 %
candidate division Zixibacteria bacterium SM23_81	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM23_81	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Candidatus Contendobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter → Candidatus Contendobacter sp.	1.56 %
Desulfofustis glycolicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → Desulfofustis glycolicus	0.78 %
Candidatus Manganitrophus noduliformans	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales → Candidatus Manganitrophaceae → Candidatus Manganitrophus → Candidatus Manganitrophus noduliformans	0.78 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.78 %
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	0.78 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.78 %
candidate division Zixibacteria bacterium SM23_81	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM23_81	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11373669	Not Available	541	Open in IMG/M
3300004268\|Ga0066398_10096670	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300004268\|Ga0066398_10144178	Not Available	592	Open in IMG/M
3300004463\|Ga0063356_103148416	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300005166\|Ga0066674_10172850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter → Candidatus Contendobacter sp.	1025	Open in IMG/M
3300005179\|Ga0066684_10101493	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005181\|Ga0066678_10647194	Not Available	704	Open in IMG/M
3300005184\|Ga0066671_10284171	Not Available	1032	Open in IMG/M
3300005186\|Ga0066676_11124065	Not Available	517	Open in IMG/M
3300005294\|Ga0065705_10142004	All Organisms → cellular organisms → Bacteria → Acidobacteria	2129	Open in IMG/M
3300005295\|Ga0065707_10180738	All Organisms → cellular organisms → Bacteria → Acidobacteria	1420	Open in IMG/M
3300005332\|Ga0066388_101993312	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300005445\|Ga0070708_100165533	All Organisms → cellular organisms → Bacteria → Proteobacteria	2062	Open in IMG/M
3300005457\|Ga0070662_101172636	Not Available	660	Open in IMG/M
3300005553\|Ga0066695_10423148	Not Available	823	Open in IMG/M
3300005558\|Ga0066698_10204968	All Organisms → cellular organisms → Bacteria → Acidobacteria	1350	Open in IMG/M
3300005560\|Ga0066670_10332204	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300005561\|Ga0066699_10555594	Not Available	823	Open in IMG/M
3300005569\|Ga0066705_10600833	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300005569\|Ga0066705_10774696	Not Available	573	Open in IMG/M
3300005598\|Ga0066706_10075405	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300005719\|Ga0068861_100644996	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005764\|Ga0066903_100424670	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300005981\|Ga0081538_10043871	All Organisms → cellular organisms → Bacteria → Acidobacteria	2799	Open in IMG/M
3300006194\|Ga0075427_10005304	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300006800\|Ga0066660_10611357	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300006844\|Ga0075428_100568685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300006844\|Ga0075428_102384182	Not Available	543	Open in IMG/M
3300006845\|Ga0075421_101056395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	915	Open in IMG/M
3300006847\|Ga0075431_100188718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	2112	Open in IMG/M
3300006847\|Ga0075431_100384250	Not Available	1407	Open in IMG/M
3300006854\|Ga0075425_100346752	All Organisms → cellular organisms → Bacteria → Acidobacteria	1710	Open in IMG/M
3300006880\|Ga0075429_100031760	All Organisms → cellular organisms → Bacteria	4589	Open in IMG/M
3300006880\|Ga0075429_101280117	Not Available	639	Open in IMG/M
3300006904\|Ga0075424_101826327	Not Available	643	Open in IMG/M
3300006969\|Ga0075419_10104684	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300007265\|Ga0099794_10453314	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300009012\|Ga0066710_101720755	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300009012\|Ga0066710_101934241	Not Available	880	Open in IMG/M
3300009089\|Ga0099828_10051545	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300009089\|Ga0099828_10057962	All Organisms → cellular organisms → Bacteria → Proteobacteria	3240	Open in IMG/M
3300009090\|Ga0099827_10217039	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300009094\|Ga0111539_10163718	All Organisms → cellular organisms → Bacteria → Acidobacteria	2601	Open in IMG/M
3300009137\|Ga0066709_100317368	All Organisms → cellular organisms → Bacteria → Acidobacteria	2125	Open in IMG/M
3300009137\|Ga0066709_100649787	Not Available	1510	Open in IMG/M
3300009137\|Ga0066709_101266218	Not Available	1083	Open in IMG/M
3300009147\|Ga0114129_11219834	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300009162\|Ga0075423_10752618	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300009162\|Ga0075423_13141452	Not Available	506	Open in IMG/M
3300009792\|Ga0126374_10026937	All Organisms → cellular organisms → Bacteria → Acidobacteria	2627	Open in IMG/M
3300009821\|Ga0105064_1007085	Not Available	1934	Open in IMG/M
3300009822\|Ga0105066_1051000	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300010038\|Ga0126315_10173471	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300010043\|Ga0126380_10698690	Not Available	815	Open in IMG/M
3300010046\|Ga0126384_10303997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300010304\|Ga0134088_10217231	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300010361\|Ga0126378_10282652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1759	Open in IMG/M
3300010361\|Ga0126378_10705681	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300010376\|Ga0126381_103599103	Not Available	607	Open in IMG/M
3300010398\|Ga0126383_10598182	Not Available	1174	Open in IMG/M
3300011119\|Ga0105246_11993401	Not Available	560	Open in IMG/M
3300012096\|Ga0137389_10500979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300012189\|Ga0137388_10552214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300012205\|Ga0137362_10466943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300012206\|Ga0137380_10537132	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300012210\|Ga0137378_11251395	Not Available	658	Open in IMG/M
3300012212\|Ga0150985_120202259	Not Available	729	Open in IMG/M
3300012351\|Ga0137386_10382753	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300012357\|Ga0137384_10611810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter → Candidatus Contendobacter sp.	889	Open in IMG/M
3300012359\|Ga0137385_10092970	All Organisms → cellular organisms → Bacteria → Acidobacteria	2675	Open in IMG/M
3300012360\|Ga0137375_11181631	Not Available	587	Open in IMG/M
3300012361\|Ga0137360_10156767	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300012363\|Ga0137390_11486393	Not Available	619	Open in IMG/M
3300012404\|Ga0134024_1220992	Not Available	536	Open in IMG/M
3300012405\|Ga0134041_1320863	Not Available	509	Open in IMG/M
3300012469\|Ga0150984_113374662	Not Available	560	Open in IMG/M
3300012948\|Ga0126375_10015687	All Organisms → cellular organisms → Bacteria → Acidobacteria	3378	Open in IMG/M
3300012957\|Ga0164303_11106395	Not Available	572	Open in IMG/M
3300012971\|Ga0126369_10238335	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300012971\|Ga0126369_11595759	Not Available	742	Open in IMG/M
3300014154\|Ga0134075_10331956	Not Available	665	Open in IMG/M
3300015358\|Ga0134089_10165163	Not Available	879	Open in IMG/M
3300015371\|Ga0132258_10729078	All Organisms → cellular organisms → Bacteria → Acidobacteria	2496	Open in IMG/M
3300015372\|Ga0132256_101563555	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300015373\|Ga0132257_100462772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300016270\|Ga0182036_10381797	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM23_81	1093	Open in IMG/M
3300017659\|Ga0134083_10504782	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300017965\|Ga0190266_10368567	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300020003\|Ga0193739_1064754	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300021476\|Ga0187846_10482191	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_13041423	Not Available	568	Open in IMG/M
3300025910\|Ga0207684_10478920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300025933\|Ga0207706_10777075	Not Available	815	Open in IMG/M
3300025972\|Ga0207668_10717741	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300026118\|Ga0207675_100186741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1987	Open in IMG/M
3300026312\|Ga0209153_1030649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	1834	Open in IMG/M
3300026330\|Ga0209473_1336612	Not Available	505	Open in IMG/M
3300027654\|Ga0209799_1091705	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300027873\|Ga0209814_10274336	Not Available	733	Open in IMG/M
3300027875\|Ga0209283_10385088	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300027875\|Ga0209283_10818567	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300027882\|Ga0209590_10305167	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300027909\|Ga0209382_10068413	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300027909\|Ga0209382_11206154	Not Available	773	Open in IMG/M
3300027961\|Ga0209853_1022454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1899	Open in IMG/M
3300028380\|Ga0268265_10706016	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300028809\|Ga0247824_10984456	Not Available	532	Open in IMG/M
3300028814\|Ga0307302_10029802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfofustis → Desulfofustis glycolicus	2503	Open in IMG/M
3300030903\|Ga0308206_1173808	Not Available	532	Open in IMG/M
3300030990\|Ga0308178_1153748	Not Available	531	Open in IMG/M
3300031092\|Ga0308204_10320526	Not Available	525	Open in IMG/M
3300031094\|Ga0308199_1011327	Not Available	1359	Open in IMG/M
3300031095\|Ga0308184_1044707	Not Available	558	Open in IMG/M
3300031114\|Ga0308187_10060310	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Candidatus Troglogloeales → Candidatus Manganitrophaceae → Candidatus Manganitrophus → Candidatus Manganitrophus noduliformans	1074	Open in IMG/M
3300031114\|Ga0308187_10375170	Not Available	555	Open in IMG/M
3300031421\|Ga0308194_10113221	Not Available	796	Open in IMG/M
3300031879\|Ga0306919_11377778	Not Available	533	Open in IMG/M
3300031942\|Ga0310916_10942936	Not Available	722	Open in IMG/M
3300031943\|Ga0310885_10284825	Not Available	849	Open in IMG/M
3300031946\|Ga0310910_11479289	Not Available	521	Open in IMG/M
3300032000\|Ga0310903_10089045	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300032003\|Ga0310897_10653990	Not Available	524	Open in IMG/M
3300032174\|Ga0307470_10335653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300032180\|Ga0307471_103445267	Not Available	560	Open in IMG/M
3300034661\|Ga0314782_143342	Not Available	580	Open in IMG/M
3300034668\|Ga0314793_055192	Not Available	739	Open in IMG/M
3300034676\|Ga0314801_193815	Not Available	516	Open in IMG/M
3300034678\|Ga0314803_091528	Not Available	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	25.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.47%
Cave	Environmental → Terrestrial → Cave	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.84%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Sand	Environmental → Terrestrial → Soil → Sand	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_113736691	3300000550	Soil	MPPAKRRVMAVQSHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATHQAGASPSARAGRPRGPDEPAVPVRRRRTRARP
Ga0066398_100966702	3300004268	Tropical Forest Soil	MPPAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVR
Ga0066398_101441781	3300004268	Tropical Forest Soil	MPPAKRRVVAVQPQEAPPVQATPAPRRRVGRPPGEASTIVNIRLSLSLVAQLDHYRDRLEEQTGLKANRGMITRRALELFLATHQDEASPSARAGQPPGLDQPAVPVRRRRTSARAKAR*
Ga0063356_1031484161	3300004463	Arabidopsis Thaliana Rhizosphere	MSPAKRRVVAVQPHEVPQVQAAPAPQRRVGRPPGEASTIINIRLPLSLVARLDHYLDQLEGQTGLKANRGMIARRALDIFLATHEDEASSSTRTGRLPEPDEPVLPVRRRRTSARPKAR*
Ga0066674_101728502	3300005166	Soil	MPPAKRRVVVVQPQEAPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMIARRALDIFLATHEDEASPSARARRPSGPDQPAVPVRRRRTSARIKAR*
Ga0066684_101014932	3300005179	Soil	MPTAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATHQDEASPSARARRPRGPDEPAVPVRRRRTRARPPAR*
Ga0066678_106471941	3300005181	Soil	MPPAKRRVVATQTPEVPYAQEAPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPKVQ*
Ga0066671_102841712	3300005184	Soil	MPTAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0066676_111240651	3300005186	Soil	MPTAKPCGVAVPAQEGPRAQDAPAPKRRVGRPPGEASTIVNVRLPLSLMARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPCPDAPFVPV
Ga0065705_101420042	3300005294	Switchgrass Rhizosphere	MPPAKRRVMAVQSHEVPPLQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR*
Ga0065707_101807382	3300005295	Switchgrass Rhizosphere	MPPAKRRVMAVQSHEVPPLQATPAPQRRVGRPPGEASTLVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR*
Ga0066388_1019933122	3300005332	Tropical Forest Soil	MPPAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGR
Ga0070708_1001655331	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPPAKRRVVAVQPQEAPPVQATPAPRRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALELFLGTHQDEASPSGRAGRPPGPDQPTVPVRRRRTSARAEAR*
Ga0070662_1011726361	3300005457	Corn Rhizosphere	MPPAKRRVLAVQPQELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAGASPSARAGRPSGPDEPAVPVRRRRTRARPTAR*
Ga0066695_104231481	3300005553	Soil	MPPAKRRVVVVQPQEAPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDRHLARLEQQTGLKANRGMIARRALDIFLATHEDEASPSARARRPPSPDQPAVPVRRRRTSARLKAR*
Ga0066698_102049681	3300005558	Soil	MPPAKRRVVATQTPEVPYAQEAPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPQVQ*
Ga0066670_103322042	3300005560	Soil	MPPAKRRVVAVQPQEMPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0066699_105555942	3300005561	Soil	MPPAKRRVVATQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPKVQ*
Ga0066705_106008331	3300005569	Soil	MPPAKRRVVAVQPQEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQDEASPSARAGRPSGPDEPAVPVRRRRT
Ga0066705_107746961	3300005569	Soil	MPPAKRRVVAAQTPEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPKVQ*
Ga0066706_100754051	3300005598	Soil	MPPAKRRVVATQTPEVLHAQEAPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPQVQ*
Ga0068861_1006449962	3300005719	Switchgrass Rhizosphere	MPPAKRRVMAVQPHELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAGASPSARAGRPSGPDEPAVPVRRRRTRARPTAR*
Ga0066903_1004246703	3300005764	Tropical Forest Soil	MPPAKRRVVAVQTQEVPLVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLAHYLDRLEGQTGLKANRGMIARHALELFLATHEDETTPSARAGRRRGHDEPAISVPRPRSGARAKGQ*
Ga0081538_100438713	3300005981	Tabebuia Heterophylla Rhizosphere	MPPAKRRVVAVQPHEGPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDHYLDRLEEQTGLKANRGMIARRALDIFLATHEDEASPSARARRPSGPDQPAVPVRRRRTSAPSKAR*
Ga0075427_100053041	3300006194	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0066660_106113571	3300006800	Soil	MPPAKRRVVAVQPQEMPPVQAAPAPQRRVGRPPGEASTIVNLRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATHQDEASPSARARRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075428_1005686852	3300006844	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075428_1023841822	3300006844	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075421_1010563952	3300006845	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR*
Ga0075431_1001887183	3300006847	Populus Rhizosphere	QATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075431_1003842502	3300006847	Populus Rhizosphere	MPPAKRRVVAGQPHEVPPVQATPAPRRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075425_1003467522	3300006854	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATYQDEASPPARAGRPSGPDEPAVPVRRRRTSARPTAR*
Ga0075429_1000317606	3300006880	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPQGPDEPAVPVRRRRTRARPPAR*
Ga0075429_1012801171	3300006880	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075424_1018263271	3300006904	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATYQDEASPPARAGRPSGPDEPAVPVRRRRTSARPTAR*
Ga0075419_101046843	3300006969	Populus Rhizosphere	MPPAKRRVVAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR*
Ga0099794_104533142	3300007265	Vadose Zone Soil	MPPAKRRVVAVQPQEVPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPPGPDEPAIPVRRRRTSARPKAR*
Ga0066710_1017207552	3300009012	Grasslands Soil	MPTAKPCGVAVPAQEGPRAQDAPAPKRRVGRPPGEASTIVNVRLPLSLMARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDKASPSARAGRQPRPEAPSVPVRKRRTSARPKAR
Ga0066710_1019342412	3300009012	Grasslands Soil	MPPAKRRVVVVQPQEAPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDRHLARLEQQTGLKANRGMIARRALDIFLATHEDEASPSARARRPSGPDQPAVPVRRRRTSARLKAR
Ga0099828_100515456	3300009089	Vadose Zone Soil	MSPAKRHVAAVQAQEVPQSQEAPAPKRRVGRPPGEASTIVNVRLPLPLVARLDHYLDRLEWQTGLKANRGMIARRALELFLVTHEDEASPSARAGRQPGRDEPSVPVLRRRTGARPKAQ*
Ga0099828_100579625	3300009089	Vadose Zone Soil	MPPAKRRVVAVQPQEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPPGPDEPAVPVRRRRTSARIKAR*
Ga0099827_102170392	3300009090	Vadose Zone Soil	MPAAKRRGAAMPAQEMPAAQEASAPKRRVGRPPGEASTIVNVRLPLPLVARLDRYLDRLEWQMGLKANRGMITRRALELFLRTHEDEALPSAPAGQQPGHNEPAVPVLKRRTGARSKAQ*
Ga0111539_101637182	3300009094	Populus Rhizosphere	MPPAKRRVVAVQPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPQGPDEPAVPVRRRRTRARPPAR*
Ga0066709_1003173682	3300009137	Grasslands Soil	MPPAKRRVVAAQTPEVPYAQEAPVPQRRVGRPPGEASTMVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPKVQ*
Ga0066709_1006497873	3300009137	Grasslands Soil	MTLSTEEKRMPPAKRRVVVVQPQEAPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDRHLARLEQQTGLKANRGMIARRALDIFLATHEDEASPSARARRPPSPDQPAVPVRRRRTSARLKAR*
Ga0066709_1012662181	3300009137	Grasslands Soil	MPTAKHRGVAVPAQEGPRAQDAPAPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDAASPSARAGRQPRPEAPSVPVRKRRTSARPKAR*
Ga0114129_112198341	3300009147	Populus Rhizosphere	MPPAKRRVVAGQPHEVPPVQATPAPRRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARARRPRGPDEPAVPVRRRRTRARPPAR*
Ga0075423_107526181	3300009162	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATYQDEASPPARAGRPSGPDEPAVPVRRRRTRARPTSR*
Ga0075423_131414522	3300009162	Populus Rhizosphere	MPPAKRRVVAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARARRPRGPDEP
Ga0126374_100269373	3300009792	Tropical Forest Soil	MPPAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0105064_10070851	3300009821	Groundwater Sand	MPPAKRRVVAAQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPRPDAPFVPVRKRRTSARPKVQ*
Ga0105066_10510001	3300009822	Groundwater Sand	MPPAKRRVVAAQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPRPDAPFVPVRKRRTSA
Ga0126315_101734712	3300010038	Serpentine Soil	MPPAKRRVVAGQPHEVPPVQAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATYQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR*
Ga0126380_106986901	3300010043	Tropical Forest Soil	MPPAKRRVVAVQPQERPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0126384_103039972	3300010046	Tropical Forest Soil	MAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0134088_102172311	3300010304	Grasslands Soil	MPPAKRRVVATQTPEVPYAQEAPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSYEEAASPSKRARRQPCPDAPFVPVRKRRTSTRPQVQ*
Ga0126378_102826521	3300010361	Tropical Forest Soil	MPPAKRRVMAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0126378_107056812	3300010361	Tropical Forest Soil	MPPAKRRVVAVQPQEGPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHEDEASPSARAGRPPSPDEPARPVRKRRTSALSKAR*
Ga0126381_1035991031	3300010376	Tropical Forest Soil	PAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0126383_105981822	3300010398	Tropical Forest Soil	MPPAKRRVVAVQPQEAPPVQATPAPRRRVGRPPGEASTIVNIRLSLSLVAQLEHYRDRLEEQTGLKANRGMITRRALELFLATHQDEASPSARAGQPPGLDQPAVPVRRRRTSARAKAR*
Ga0105246_119934011	3300011119	Miscanthus Rhizosphere	MPPAKRRVLAVQPHDVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLAPHQDEASPSARAGRPRGPDEPAVPVRRRRPRARPKAR*
Ga0137389_105009792	3300012096	Vadose Zone Soil	MPPAKRRVVAVQPQEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPPGPDEPAIPVRRRRTSARPKAR*
Ga0137388_105522142	3300012189	Vadose Zone Soil	MPPAKRRVVAVQPQEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASSSARAGRPPGPDEPAVPVRRRRTSARPKAR*
Ga0137362_104669431	3300012205	Vadose Zone Soil	MPPAKRRVVAAQTPEVLHAQEVPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSARVGRQPHPDASSVPVRKRRTSARPKAR*
Ga0137380_105371322	3300012206	Vadose Zone Soil	MPPAKRRVVVVQPQEAPPVQAAPAPQRRVGRPPGEASTIVNVRLPLSLVARLDRHLARLEQQTGLKANRGMIARRALDIFLATHEDEASPSARAGRPRGPDEPAVPVRRRRTRARPTAR*
Ga0137378_112513951	3300012210	Vadose Zone Soil	MPPAKRRVVAVQPHEVPPGQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRAHPLAR*
Ga0150985_1202022591	3300012212	Avena Fatua Rhizosphere	MPPAKRRVVAVQPQELPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQDEASPSARAGRPSGPDEPAVPVRRRRTRARPPAR*
Ga0137386_103827532	3300012351	Vadose Zone Soil	MPPAKRRVVAVQPHEVPPGQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLNDYLDRLEGQTGLKANRGMIARRALEIFLATHEDEASPSARARRPPSPDQPAVPVRRRRTS
Ga0137384_106118101	3300012357	Vadose Zone Soil	MPPAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRAHPLAR*
Ga0137385_100929703	3300012359	Vadose Zone Soil	MPAAKHRGVAVPVQEGPRAQDAPAPTRRVGRPPGEASTIVNVRLPLSLVARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDEASPYARAGRQPRPEAPPVPVRKRRTSARLKAR*
Ga0137375_111816311	3300012360	Vadose Zone Soil	MPPAKRRVVAGQPQEVPPVQAASAPQRRVGRPPGEVSTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGQPPGPDEPAVPVRRRRTSARIKAR*
Ga0137360_101567672	3300012361	Vadose Zone Soil	MPPAKRRVVAVQTQQMPQSQETPTPKRRVGRPQGEASTIVNVRLPLPLVARLDRYLDRLEGQTGLKATRGMIARRALELFLVTHEDEASPSARAGRQPGHDEPAVPVLRRRTGARPKAQ*
Ga0137390_114863931	3300012363	Vadose Zone Soil	MPPAKRRVVAVQPQEVPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPPGPDEPAIPVRRRRTRARPTAR*
Ga0134024_12209921	3300012404	Grasslands Soil	NRMPTAKRRVVAVQPHEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLAGQTGLKANRGMIARRALELFLATHQDEASPSARAGRPAGPAEPAVPVRRRRTRVRPTAR*
Ga0134041_13208631	3300012405	Grasslands Soil	MPTAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPAGPAEPAVPVRRRRTRARPTAR*
Ga0150984_1133746621	3300012469	Avena Fatua Rhizosphere	AVQPHEGLPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASRSARAGRPSGPDEPAVPVRRRRTHAHPTAR*
Ga0126375_100156873	3300012948	Tropical Forest Soil	MPPAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMITRRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0164303_111063952	3300012957	Soil	MPPAKRRVLAVQPHEGPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLAPHQDAASPSARAGRPRGPDEPAVPVRGRSTRARPLAR*
Ga0126369_102383352	3300012971	Tropical Forest Soil	MWYNEEIRLFSDVENRMPSAKRRMAAAQTQHLSPPQEAPAPKRRVGRPPGEASTIVNVRLPLALVARLDRYIEQIEQQTGLKANRGMMARRALELFLATHEDEASSSARVGRLPGPDAPSVPVLKRRPSARSKIR*
Ga0126369_115957591	3300012971	Tropical Forest Soil	MPPAKRRVAAVQTQEVPPVQAAPALQRRVGRPPGEASTIVNVRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRTRRTRARP*
Ga0134075_103319561	3300014154	Grasslands Soil	MPPAKRRVVATQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDEASPYARAGRQPRPEAPSVPVRKRRTSARPKAR*
Ga0134089_101651631	3300015358	Grasslands Soil	MPTAKPCGVAVPAQEGPRAQDAPAPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDAASPSARAGRQPRPEAPSVPVRKRRTSARPKAR*
Ga0132258_107290783	3300015371	Arabidopsis Rhizosphere	MPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEVSPSARAGRPPGHDEPAVPVRRRRTSARAKAR*
Ga0132256_1015635552	3300015372	Arabidopsis Rhizosphere	MPPAKHRGVAVQPQEMPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGP
Ga0132257_1004627722	3300015373	Arabidopsis Rhizosphere	MPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEVSPSARAGRPPSHDEPAVPVRRRRTSARAKAR*
Ga0182036_103817972	3300016270	Soil	EVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR
Ga0134083_105047822	3300017659	Grasslands Soil	MPTAKHRGVAVPVQEGPRAQDAPAPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDKASPSARAGRQPRPE
Ga0190266_103685671	3300017965	Soil	MPPAKRRVVAVPPHEGPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEVFLATHQAEASPSARAGRPLGPDEPAVPVRRRRPSARPKAR
Ga0193739_10647542	3300020003	Soil	MPPAKRRVVAARTPEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPRPDAPFVPVRKRRTSARPKVQ
Ga0187846_104821911	3300021476	Biofilm	VVAVQPQEEPYAQEAPVRKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEEEHAPSTRTERQPRPDAPAVPVRKRRTSARPKAR
Ga0126371_130414231	3300021560	Tropical Forest Soil	KSLLEIFYTTIIIYVVKWNICPLAQEENRMPPAKRRVMAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARP
Ga0207684_104789202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPPAKRRVVAVQPQEAPPVQATPAPRRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALELFLGTHQDEASPSGRAGRPPGPDQPTVPVRRRRTSARAEAR
Ga0207706_107770751	3300025933	Corn Rhizosphere	MPPAKRRVLAVQPQELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAGASPSARAGRPSGPDEPAVPVRRRRTRARPTAR
Ga0207668_107177412	3300025972	Switchgrass Rhizosphere	MPPAKRRVMAVQPHELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAEASPSARAGRPSGPDEPAVPVRRRRTRARPTAR
Ga0207675_1001867414	3300026118	Switchgrass Rhizosphere	MPPAKRRVMAVQPHELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAGASPSARAGRPSGPDEPAVPVRRRRTRARPTAR
Ga0209153_10306493	3300026312	Soil	MPTAKRRVMAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALELFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0209473_13366121	3300026330	Soil	HEENRMPPAKRRVVAVQPQEMPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDHYLDRLEGQTGLKANRGMIARRALELFLATHQDEASPSARARRPRGPDEPAVPVRRRRTRARPPAR
Ga0209799_10917052	3300027654	Tropical Forest Soil	MPPAKRRVVAVQPQEAPPVQATPAPRRRVGRPPGEASTIVNIRLSLSLVAQLDHYRDRLEEQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVR
Ga0209814_102743361	3300027873	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0209283_103850881	3300027875	Vadose Zone Soil	MSPAKRHVAAVQAQEVPQSQEAPAPKRRVGRPPGEASTIVNVRLPLPLVARLDHYLDRLEWQTGLKANRGMIARRALELFLVTHEDEASPSARAGRQPGRDEPSVPVLRRRTGARPKAQ
Ga0209283_108185671	3300027875	Vadose Zone Soil	MPPAKRRVVAVQPQEVLPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPAGPAEPAIP
Ga0209590_103051671	3300027882	Vadose Zone Soil	MPAAKRRGAAMPAQEMPAAQEASAPKRRVGRPPGEASTIVNVRLPLPLVARLDRYLDRLEWQMGLKANRGMITRRALELFLRTHEDEALPSAPAGQQPGHNEPAVPVLKRRTGARSKAQ
Ga0209382_100684132	3300027909	Populus Rhizosphere	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0209382_112061541	3300027909	Populus Rhizosphere	MPPAKRRVLAVQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR
Ga0209853_10224543	3300027961	Groundwater Sand	MPPAKRRVVAAQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPRPDAPFVPVRKRRTSARPKVQ
Ga0268265_107060161	3300028380	Switchgrass Rhizosphere	MPPAKRRVLAVQPQELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0247824_109844561	3300028809	Soil	VLWNIGPLAQEENRMPPAKRRVLAVQPQELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQAEASPSARAGRPSGPDEPAVPVRRRRTRARPPAR
Ga0307302_100298021	3300028814	Soil	MPPAKRRVVAAQTPEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSARVGRQPHPDASSVPVRKRRTTSARPKAR
Ga0308206_11738081	3300030903	Soil	MPPAKRRVVAVQPHELPLVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALDLFVATHQDEASPSARAGRPSGPDEPAVPVRRRRTSARPTAR
Ga0308178_11537481	3300030990	Soil	AKRRVVAGQPQEVPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLQANRGMIARRALEIFLATNQDEASPSARAGRPPGPDEPTVPVRRRRTGARPKVR
Ga0308204_103205261	3300031092	Soil	MPPAKRRVVAAQTPEVLHAQEVPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSKRARRQPRPDAPFVPVRKRRTSARPKVQ
Ga0308199_10113271	3300031094	Soil	MPPAKRRVVAAQTQEVPYAQEAPVPKRRVGRPPGEASTIVNVRLPLSLVARLDRYLARLEQQTGLKANRGMMARRALELFLLSHEDAASPSARAGRQPSPDTPSVPGRKRRTSARPKAR
Ga0308184_10447071	3300031095	Soil	MPPAKRRVVAGQPQEVPPVQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDHYLDRLEGQTGLQANRGMIARRALEIFLATHQDEASPSTRAGQPPGPDEPAIPVRRRRTSARPKAR
Ga0308187_100603101	3300031114	Soil	MPPAKRRVVAAQTPEVLHAQEVPVPQRRVGRPPGEASTIVNVRLPLSLVARLDRYLERLEGQTGLKANRGMMARRALELFLLSHEDEASPSARAGRQPSPDTPSVPVRKRRTSARPKAR
Ga0308187_103751701	3300031114	Soil	MPPAKRRVVAVQPQEGLPIQAAPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATHQDEASPSARAGRPSGPDEPAVPVRRRRTSARPKAR
Ga0308194_101132211	3300031421	Soil	MPPAKRRVVAGQPQEVPPVQAAPAPQRRVGRPPGEVSTIVNIRLPLSLVARLDHYLDRLEGQTGLQANRGMIARRALEIFLATHQDEASPSARAGRPPGPDEPTVPVRRRRTGARPKVR
Ga0306919_113777781	3300031879	Soil	MPPAKRRVMAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR
Ga0310916_109429362	3300031942	Soil	PPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR
Ga0310885_102848251	3300031943	Soil	MPPAKRRVVAVQPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPRSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0310910_114792891	3300031946	Soil	PAKRRVMAGQPHEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPLAR
Ga0310903_100890452	3300032000	Soil	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPRSLVARLDDYLDRLVGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPQGPDEPAVPVRRRRTRARPPAR
Ga0310897_106539901	3300032003	Soil	MPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEASPSARAGRPQGPDEPAVPVRRRRTRARPPAR
Ga0307470_103356531	3300032174	Hardwood Forest Soil	MPPAKRRVMAVQPHELSPVHATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALELFLATYQDEASPPARAGRPSGPDEPAVPVRRRRTRARPPAR
Ga0307471_1034452671	3300032180	Hardwood Forest Soil	MPPAKRRVVAVPPQKVPPVQATPAPQRRVGRPPGEASTIVNVRLPLSLVARLDDYLDRLEEQTGLKANRGMIARRALAIFLATHQDEASPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0314782_143342_199_558	3300034661	Soil	MPPAKRRVVAVQPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPRSLVARLDDYLDRLVGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0314793_055192_1_375	3300034668	Soil	QEENRMPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0314801_193815_1_363	3300034676	Soil	RMPPAKRRVVAVPPQEVPPVQATPAPQRRVGRPPGEASTIVNIRLPLSLVARLDDYLDRLEGQTGLKANRGMIARRALEIFLATHQDEAAPSARAGRPRGPDEPAVPVRRRRTRARPPAR
Ga0314803_091528_2_370	3300034678	Soil	ENRMPPAKRRVLAVQPHDVPPVQATPAPQRRVGRPPGEASAIVNIRLPLSLVAQLDDYLDRLEGQTGLKANRGMIARRALEIFLAPHQDEASPSARAGRPRGPDEPAVPVRRRRPRARPKAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064873

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences