Metagenome / Metatranscriptome Family F064872

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064872
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	50 residues
Representative Sequence	GLRFAACTAVCGLLLATGWAHPVALVAGFTVLPCDLIARGLASARTER
Number of Associated Samples	109
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	87.50 %
% of genes from short scaffolds (< 2000 bps)	78.91 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.719 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.969 % of family members)
Environment Ontology (ENVO)	Unclassified (28.125 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00119	ATP-synt_A	85.16
PF06971	Put_DNA-bind_N	7.03
PF00137	ATP-synt_C	5.47
PF02559	CarD_CdnL_TRCF	0.78
PF00528	BPD_transp_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	85.16
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	5.47

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.72 %
Unclassified	root	N/A	13.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.72 %
Unclassified	root	N/A	13.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.72 %
Unclassified	root	N/A	13.28 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	60.94 %
Unclassified	root	N/A	13.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	60.94 %
Unclassified	root	N/A	13.28 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	60.94 %
Unclassified	root	N/A	13.28 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	60.94 %
Unclassified	root	N/A	13.28 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	60.94 %
Unclassified	root	N/A	13.28 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1185260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	982	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100499358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300000956\|JGI10216J12902_105579695	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300000956\|JGI10216J12902_107097906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	936	Open in IMG/M
3300001661\|JGI12053J15887_10300345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300002560\|JGI25383J37093_10107639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300002560\|JGI25383J37093_10151922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300002911\|JGI25390J43892_10012642	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300002912\|JGI25386J43895_10164158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300002912\|JGI25386J43895_10189221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300005174\|Ga0066680_10743103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300005181\|Ga0066678_10120634	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300005332\|Ga0066388_104140821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300005446\|Ga0066686_10733480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300005450\|Ga0066682_10869878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300005454\|Ga0066687_10041465	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300005555\|Ga0066692_10300385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1018	Open in IMG/M
3300005576\|Ga0066708_10375557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300005586\|Ga0066691_10133227	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005586\|Ga0066691_10177140	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005843\|Ga0068860_100382224	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300006034\|Ga0066656_11109568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300006058\|Ga0075432_10190453	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006194\|Ga0075427_10006939	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300006797\|Ga0066659_11375390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300006797\|Ga0066659_11603294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300006844\|Ga0075428_101708952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300006845\|Ga0075421_100758401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1121	Open in IMG/M
3300006854\|Ga0075425_102961025	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006894\|Ga0079215_10264818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	922	Open in IMG/M
3300006969\|Ga0075419_10761542	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009012\|Ga0066710_101206640	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300009148\|Ga0105243_12173984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300009793\|Ga0105077_123269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300009804\|Ga0105063_1023166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300009823\|Ga0105078_1047018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300009836\|Ga0105068_1018736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1167	Open in IMG/M
3300010047\|Ga0126382_10335770	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300010360\|Ga0126372_10596748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1059	Open in IMG/M
3300010361\|Ga0126378_12110213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300010362\|Ga0126377_12853410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300012198\|Ga0137364_10111995	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300012207\|Ga0137381_10389232	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300012207\|Ga0137381_10442223	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300012285\|Ga0137370_10023486	All Organisms → cellular organisms → Bacteria	3125	Open in IMG/M
3300012357\|Ga0137384_10372547	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300012359\|Ga0137385_11669010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300012362\|Ga0137361_10232533	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300012390\|Ga0134054_1226958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300012582\|Ga0137358_10022869	All Organisms → cellular organisms → Bacteria	4041	Open in IMG/M
3300012582\|Ga0137358_10085338	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300012582\|Ga0137358_10491850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300012918\|Ga0137396_10042030	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300012922\|Ga0137394_10732321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	831	Open in IMG/M
3300012927\|Ga0137416_10714068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300012944\|Ga0137410_11016124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300012944\|Ga0137410_12014496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300012972\|Ga0134077_10199792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300012976\|Ga0134076_10198307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300012986\|Ga0164304_10912122	Not Available	688	Open in IMG/M
3300015245\|Ga0137409_10126305	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300015358\|Ga0134089_10003429	All Organisms → cellular organisms → Bacteria	4611	Open in IMG/M
3300015372\|Ga0132256_101384686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300015374\|Ga0132255_101165181	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300016294\|Ga0182041_12157696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300017656\|Ga0134112_10398817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300017659\|Ga0134083_10171487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	886	Open in IMG/M
3300018056\|Ga0184623_10364143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300018468\|Ga0066662_10680850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	978	Open in IMG/M
3300018468\|Ga0066662_10774413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	927	Open in IMG/M
3300018482\|Ga0066669_11610969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300019259\|Ga0184646_1067451	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300025923\|Ga0207681_10027421	All Organisms → cellular organisms → Bacteria	3683	Open in IMG/M
3300026296\|Ga0209235_1231010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300026298\|Ga0209236_1247570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300026322\|Ga0209687_1274983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300026326\|Ga0209801_1228479	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300026327\|Ga0209266_1067246	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300026333\|Ga0209158_1236293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300026333\|Ga0209158_1340941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300026528\|Ga0209378_1205811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300027384\|Ga0209854_1032982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300027880\|Ga0209481_10453217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300027903\|Ga0209488_11218836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300028381\|Ga0268264_10792726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300028536\|Ga0137415_10546939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	967	Open in IMG/M
3300031544\|Ga0318534_10271712	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	977	Open in IMG/M
3300031562\|Ga0310886_10179134	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300031564\|Ga0318573_10075549	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300031682\|Ga0318560_10244455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	963	Open in IMG/M
3300031720\|Ga0307469_10524547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300031720\|Ga0307469_11285407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300031747\|Ga0318502_10500354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300031771\|Ga0318546_10367444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1002	Open in IMG/M
3300031820\|Ga0307473_10783230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300031859\|Ga0318527_10240377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300031879\|Ga0306919_10373848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1091	Open in IMG/M
3300031892\|Ga0310893_10122633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	980	Open in IMG/M
3300031896\|Ga0318551_10055270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2014	Open in IMG/M
3300031908\|Ga0310900_10072691	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300031940\|Ga0310901_10426538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300032055\|Ga0318575_10488276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300032075\|Ga0310890_11358586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300032180\|Ga0307471_100616147	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300033812\|Ga0364926_108050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300034114\|Ga0364938_031500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300034178\|Ga0364934_0043958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1649	Open in IMG/M
3300034417\|Ga0364941_057377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	883	Open in IMG/M
3300034667\|Ga0314792_145505	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300034672\|Ga0314797_017028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1105	Open in IMG/M
3300034676\|Ga0314801_022660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1087	Open in IMG/M
3300034819\|Ga0373958_0119506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.38%
Host-Associated	Host-Associated	15.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.81%
Plants	Host-Associated → Plants	15.62%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.28%
Floodplain	Environmental → Terrestrial → Floodplain	3.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.94%
Sand	Environmental → Terrestrial → Soil → Sand	5.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.12%
Loam	Environmental → Terrestrial → Soil → Loam	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.03%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.47%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009793	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_11852602	2228664022	Soil	AAAWILGAGLRFAACAGACGILLAYGWAHPIALVAGFTVLPCDLIARGLESARTER
INPhiseqgaiiFebDRAFT_1004993582	3300000364	Soil	TAGSGSAAASVWLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
JGI10216J12902_1055796951	3300000956	Soil	LATGWAHPVALVAGFTVLPCDLIARGLESARTER*
JGI10216J12902_1070979061	3300000956	Soil	LRFTACAAACGILLAYGWAHPLALVAGFTVLPCDVIARGLESARRER*
JGI12053J15887_103003452	3300001661	Forest Soil	LATGWAHPIALVAGFTVLPCDVIARGLASARTER*
JGI25383J37093_101076391	3300002560	Grasslands Soil	GAGLRFAACTVACALLLTTGWAHPVALLVGFTVLPCDLIARGLAGARTER*
JGI25383J37093_101519221	3300002560	Grasslands Soil	FAACTAACALLLTTGWAHPVALVAGFTVLPCDLIARGLAASRAER*
JGI25390J43892_100126421	3300002911	Grasslands Soil	ACMAACAWLLSTGWAHPIALMAGFSVLPCDVIARGLALGRGGR*
JGI25386J43895_101641582	3300002912	Grasslands Soil	AWLVGAGLRFAACTVACALLLTTGWAHPVALVAGFTVLPCDLIARGLAAARTER*
JGI25386J43895_101892211	3300002912	Grasslands Soil	GLRFAACTAACALLLTTGWAHPVALVAGFTVLPCDLIARGLAASRAER*
Ga0066397_101282721	3300004281	Tropical Forest Soil	VLSATPGTGSAAASVWLVSSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0066680_107431032	3300005174	Soil	ACALLLTTGWAHPVALVAGFTVLPCDLIARGLAAARTER*
Ga0066678_101206341	3300005181	Soil	FAACTAACGILLATGWAHPVALVAGFTVLPCDLIARGLASARAER*
Ga0065707_104206612	3300005295	Switchgrass Rhizosphere	VLSATAGSGSAAASVWLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0066388_1041408212	3300005332	Tropical Forest Soil	WIIGAGLRFVACAAACGALLAYGWAHPIGLVAGFTVLPCDLVARGLASARMER*
Ga0066686_107334802	3300005446	Soil	GSASAGAWLIGAGLRFAACTLACALLFATGWAYPIPLVMGFTVLPCDLIARGLAAARAER
Ga0066682_108698782	3300005450	Soil	GAGLRFAACAGACGMLLAYGWAHPIALVAGFTVLPCDLIARGLESARTER*
Ga0066687_100414654	3300005454	Soil	CTVACGILLATGWAHPIALVAGFTVLPCDLIARGLASARRER*
Ga0066692_103003853	3300005555	Soil	MVTCALLLKTGWADPIALVAGFTVLPCDVVVRGLTSARGGA*
Ga0066694_101258443	3300005574	Soil	VARAAIVTAAGGAPVSAWVIGAGLRFAACTVACAILLKTGWADPIGLVAGFTVLPCDVVVRGLASARSGA*
Ga0066708_103755572	3300005576	Soil	GAGLRFAACMVACGLLLVSGWAHPVALVAGFSVLPCAVIARGLASARERG*
Ga0066691_101332273	3300005586	Soil	VACGILLATGWAHPVALVAGFTVLPCDLVARGLASARRER*
Ga0066691_101771403	3300005586	Soil	WLIGAGLRFAACTLACALLLATGWAHPIPLVMGFTVLPCDLIARGLAAARAER*
Ga0068860_1003822241	3300005843	Switchgrass Rhizosphere	GACGILLAYGWAHPIALVAGFTVLPCDLIARGLESARTER*
Ga0066656_111095681	3300006034	Soil	GAGLRFAACTLACALLFATGWAYPIPLVMGFTVLPCDLIARGLAAARAER*
Ga0075432_101904532	3300006058	Populus Rhizosphere	TSTAAWLLGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLASARTEG*
Ga0075432_105874072	3300006058	Populus Rhizosphere	LSATAGSGSAAASVWLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0075427_100069391	3300006194	Populus Rhizosphere	CAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG*
Ga0066659_113753902	3300006797	Soil	RFAACMVACGLLLVSGWAHPVALVAGFSVLPCAVIARGLASARERG*
Ga0066659_116032942	3300006797	Soil	LLAAGWGHPLGLVVGFPVLPCALVARGLAAAREGD*
Ga0075428_1017089521	3300006844	Populus Rhizosphere	CTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0075421_1007584013	3300006845	Populus Rhizosphere	WLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0075425_1000500305	3300006854	Populus Rhizosphere	PGAGSAAASVWLVGSGLRFGASLAACTLLLATGWVHPIALLIGFTLLPCDLIVRGLAAARVEG*
Ga0075425_1029610251	3300006854	Populus Rhizosphere	AAWLIGAGLRFGVCAAACAVLLASGWAHPLALLAGFTVLPCDVIARGLAAARADG*
Ga0079215_102648182	3300006894	Agricultural Soil	LFASGWAHPAALLAGFTVLPCAVVAFGLRAAQQEA*
Ga0075424_1017412751	3300006904	Populus Rhizosphere	IATGSGSAAAWVLGAGFRFTVCAAVCGILLAYGWAHPLALVAGFTVLPCDVIARGLESARRER*
Ga0075419_103497421	3300006969	Populus Rhizosphere	RWLVARAFVATSTGSTSATAWLIGAGLRFVACTGACGVLLATGWAHPVALVAGFTVLPCDLIARGLASARTER*
Ga0075419_107615421	3300006969	Populus Rhizosphere	LGSTSTAAWLLGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLASARTEG*
Ga0066710_1012066401	3300009012	Grasslands Soil	LRFTACMAACALLLSTGWAHPIALMAGFSVLPCDVIARGLAMGRRGR
Ga0105243_121739842	3300009148	Miscanthus Rhizosphere	VGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLVVRGLAAARAEG*
Ga0105077_1232692	3300009793	Groundwater Sand	LFLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER*
Ga0105063_10231662	3300009804	Groundwater Sand	AGNTAASAWLVGAGLRFAACTVACVLFLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER*
Ga0105072_11294641	3300009818	Groundwater Sand	LGVLAGGTLAVGNFRWLVARAGLATGTGSVSAGAWLIGAGLRFATCAVACTLLLANGWAHPIALLAGFTVLPCDLVARGLAASRAES*
Ga0105078_10470182	3300009823	Groundwater Sand	LTTGWAHPVALVAGFTVLPCDLIARGLAAARTER*
Ga0105068_10187361	3300009836	Groundwater Sand	LLLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER*
Ga0126382_103357703	3300010047	Tropical Forest Soil	SLAACTLLLATGWAHPIALLVGFTLLPCDLIVRGLAAARVEG*
Ga0126372_105967481	3300010360	Tropical Forest Soil	AGLRFAACAAACGILLAYGWANPVALVAGFTVLPCDLIARGLASARTER*
Ga0126378_121102131	3300010361	Tropical Forest Soil	LTTGSTSAAAWIVGAGLRFAACAAACGALLAYGWAHPIGLVAGFTVLPCDLVARGLASARMER*
Ga0126377_128534102	3300010362	Tropical Forest Soil	ATGGGSAAAWLIGAGLRFTACAAACGILLAYGWAHPLALVAGFTVLPCDVIARGLESARTER*
Ga0137364_101119954	3300012198	Vadose Zone Soil	FAACMVACGLLLVSGWAHPVALVAGFSVLPCAVIARGLASARERG*
Ga0137381_103892321	3300012207	Vadose Zone Soil	IGAGLRFAACMVACAILLKTGWADPIGLVAGFTVLPCDVVVRGLASARRGA*
Ga0137381_104422233	3300012207	Vadose Zone Soil	LAACTLLLATGWAHPIGLLAGFTVLPCDLIVRGLAAARVEG*
Ga0137376_103767263	3300012208	Vadose Zone Soil	ATSTGSASAAAWIVGAGLRFAACTVACAILLKTGWADPIGLVAGFTVLPCDVVVRGLASARSGA*
Ga0137370_100234861	3300012285	Vadose Zone Soil	RFAVCMVACGLLLVSGWAHPVALVAGFSVLPCAVIARGLASARERS*
Ga0137384_103725473	3300012357	Vadose Zone Soil	CAGACGMLLAYGWAHPIALVAGFTVLPCDLIARGLESARTEP*
Ga0137385_116690102	3300012359	Vadose Zone Soil	CGILLATGWAHPVALVAGFTVLPCDLIARGLASARAER*
Ga0137361_102325334	3300012362	Vadose Zone Soil	LRSGWADPIALVAGFTVLPCDVVVRGLLSARRGA*
Ga0134054_12269582	3300012390	Grasslands Soil	AVTCGILLAYGWAHPVALVAGFTVLPCDVIARGLASARAER*
Ga0137358_100228695	3300012582	Vadose Zone Soil	AACAGACGMLLAYGWAHPIALVAGFTVLPCDLIARGLESARTER*
Ga0137358_100853385	3300012582	Vadose Zone Soil	CMAACAWLLSTGWAHPIALMAGFSVLPCDVIARGLALGRGGR*
Ga0137358_104918502	3300012582	Vadose Zone Soil	RFAASLAACTLLLATGWAHPIGLLAGFTVLPCDLIVRGLAAARVEG*
Ga0137396_100420305	3300012918	Vadose Zone Soil	ACTLACALLLATGWAHPIPLVMGFTVLPCDLIARGLAAARAER*
Ga0137394_107323212	3300012922	Vadose Zone Soil	LGAGLRFAACAVVCGTLLATGWAHPVALVAGFTVLPCDLIARGLASAHTER*
Ga0137394_114171112	3300012922	Vadose Zone Soil	GLATGTGSVSAGAWLIGAGLRFAACAVACALLLANGWAHPIALLAGFTVLPCDLVVRGLAASHAES*
Ga0137416_107140682	3300012927	Vadose Zone Soil	AGAWLIGTGLRFAACTLACALLLATGWAHPVPLVMGFTVLPCDLIARGLAAARAER*
Ga0137410_110161242	3300012944	Vadose Zone Soil	SAGAWLLGAELRFAACTLACALLLATGWAHPIPLVMGFTVLPCDLIARGLAAARAER*
Ga0137410_120144961	3300012944	Vadose Zone Soil	VACALLLANGWAHPIALLAGFTVLPCDLVVRGLAASHAES*
Ga0134077_101997922	3300012972	Grasslands Soil	ACALLLTTGWAHPVALLVGFTVLPCDLIARGLAGARTER*
Ga0134076_101983072	3300012976	Grasslands Soil	DAPVSAWVIGAGLRFAACTVACAILLKTGWADPIGLVAGFTVLPCDVVVRGLASARSGA*
Ga0164304_109121222	3300012986	Soil	ATGSASAAAWVLGAALRFVACAGACGLLLAYGWAHPIALVAGFTVLPCDLIARGLESARTEP*
Ga0137409_101263054	3300015245	Vadose Zone Soil	ASLAACTLLLATGWAHPIGLLAGFTVLPCDLIVRGLAAARVEG*
Ga0134089_100034295	3300015358	Grasslands Soil	FVACTAACGILLATGWAHPVALVAGFTVLPCDVIARGLASARAER*
Ga0132256_1013846861	3300015372	Arabidopsis Rhizosphere	SVWLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0132255_1011651813	3300015374	Arabidopsis Rhizosphere	LAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG*
Ga0182041_121576961	3300016294	Soil	AAWIVGAGLRFAACAAACGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0134112_103988172	3300017656	Grasslands Soil	TVACALLLTTGWAHPVALVAGFTVLPCDLIARGLAAARTER
Ga0134083_101714872	3300017659	Grasslands Soil	WLVGAGLRFTVCIVACALLLTTGWAHPIALVAGLTVLPCDLIARGLAGARTER
Ga0187775_100547613	3300017939	Tropical Peatland	AFVATEIGSTSAAAWILGAGLRFAACAGACGVLLACGWAHPLALVAGFTVLPCDVIARGLESARTER
Ga0184623_103641432	3300018056	Groundwater Sediment	ALFLATGWAHPVALVAGFTVLPCDLIARGLAGARTER
Ga0066662_106808501	3300018468	Grasslands Soil	GSASAAAWIVGAGLRFVACTVAWGVLLATGWAHPIALVAGFTVLPCDLIARGLASARRER
Ga0066662_107744131	3300018468	Grasslands Soil	EQASAWLVGAGLRFAACTAACALLLTTGWAHPVALVAGFTVLPCDLIARGLAASRAER
Ga0066669_116109692	3300018482	Grasslands Soil	GLRFAACTAVCGLLLATGWAHPVALVAGFTVLPCDLIARGLASARTER
Ga0184646_10674514	3300019259	Groundwater Sediment	AASAWLVGAGLRFAACTVACALFLATGWAHPVALVAGFTVLPCDLIARGLAGARTGR
Ga0207681_100274211	3300025923	Switchgrass Rhizosphere	LLATGWAHPIALLAGFTLLPCDLVVRGLAAARAEG
Ga0209235_12310101	3300026296	Grasslands Soil	AWLVGAGLRFAACTVACALLLTTGWAHPVALLVGFTVLPCDLIARGLAGARTER
Ga0209236_12475701	3300026298	Grasslands Soil	GLRFVACTVACALLLTTGWAHPVALVAGFTVLPCDLIARGLAAARTER
Ga0209687_12749832	3300026322	Soil	FVACTVACGILLATGWAHPIALVAGFTVLPCDLIARGLASARRER
Ga0209801_12284792	3300026326	Soil	CMVACGLLLVSGWAHPVALVAGFSVLPCAVIARGLASARERG
Ga0209266_10672464	3300026327	Soil	AGLRFAACTVACAILLKTGWADPIGLVAGFTVLPCDVVVRGLASARSGA
Ga0209158_12362931	3300026333	Soil	WLIGAGLRFAACTLACALLLATGWAHPIPLVMGFTVLPCDLIARGLAAARAER
Ga0209158_13409411	3300026333	Soil	ACAALLAAGWGHPLGLVAGFTVLPCALVARGLAAAREGD
Ga0209378_12058111	3300026528	Soil	VGAGLRFAACTAACGILLATGWAHPVALVAGFTVLPCDLIARGLASARAER
Ga0209854_10329822	3300027384	Groundwater Sand	LFLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER
Ga0209854_10601252	3300027384	Groundwater Sand	RVGLATGTGSVSAGAWLIGAGLRFATCAVACALLLANGWAHPIALLAGFTVLPCDLVARGLAASRAES
Ga0209481_102193701	3300027880	Populus Rhizosphere	RWLVARAFVATSTGSTSATAWLIGAGLRFVACTGACGVLLATGWAHPVALVAGFTVLPCDLIARGLASARTER
Ga0209481_104532171	3300027880	Populus Rhizosphere	LGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLASARTEG
Ga0209488_112188362	3300027903	Vadose Zone Soil	AGLRFAACTAACGLLLATGWAHPVALVAGFTVLPCDLIVRGLASARAER
Ga0207428_103257463	3300027907	Populus Rhizosphere	TVLSATAGSGSAAASVWLVGSGLRFGASLAACTLLLATGWAHPIALLAGFTLLPCDLIVRGLAAARAEG
Ga0268264_107927261	3300028381	Switchgrass Rhizosphere	FAACGGACGILLAYGWAHPIALVAGFTVLPCDLIARGLESARTER
Ga0137415_105469391	3300028536	Vadose Zone Soil	AGAWLIGTGLRFAACTLACALLLATGWAHPVPLVMGFTVLPCDLIARGLAAARAER
Ga0318534_102717121	3300031544	Soil	LRFAACAAACGILLAYGWAHPVALVAGFTVLPCDLIARGLESTRTER
Ga0310886_101791341	3300031562	Soil	AGACGLLLAYGWAHPIALVAGFTVLPCDLIARGLESARTEP
Ga0318573_100755491	3300031564	Soil	RGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0318560_102444551	3300031682	Soil	ACGILLAYGWAHPVALVAGFTVLPCDLIARGLESARTER
Ga0307469_105245471	3300031720	Hardwood Forest Soil	AIAWLVGSGLRFGASLAACTLLLATGWAHPIGLLVGFTVLPCDLIVRGLAAARVEG
Ga0307469_112854071	3300031720	Hardwood Forest Soil	AACTLLLASGWAHPIALLVGFTLLPCDLIVRGLAAARAEG
Ga0318502_105003542	3300031747	Soil	GLRFAACAAACGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0318546_103674441	3300031771	Soil	STSAAAWIVGAGLRFAGCAAACGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0307473_103821751	3300031820	Hardwood Forest Soil	AALSATPGTGSAAASVWLVGSGLRFGASLTACTLLLATGWAHPIALLVGFTLLPCDLIVRGLAAARAEG
Ga0307473_107832301	3300031820	Hardwood Forest Soil	AGLRFAACAAVCGTLLATGWAHPVALVAGFTVLPCDLIARGLASARTER
Ga0318527_102403772	3300031859	Soil	AACGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0306919_103738481	3300031879	Soil	CAAACGILLAYGWAHPVALVAGFTVLPCDLIARGLESARTER
Ga0310893_101226332	3300031892	Soil	AILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG
Ga0318551_100552701	3300031896	Soil	GEQRAAACGALLAYGWAHPIALVAGFTVLPCDLIARGLASARTER
Ga0310900_100726914	3300031908	Soil	AGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLTSARTEG
Ga0310901_104265381	3300031940	Soil	AGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG
Ga0310899_102734391	3300032017	Soil	WLVARAFVATELGSTSTAAWILGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG
Ga0318575_104882762	3300032055	Soil	GILLAYGWAHPVALVAGFTVLPCDLIARGLESARTER
Ga0310890_113585862	3300032075	Soil	GASAAAWVLGAALRFVACAGACGLLLAYGWAHPIALVAGFTVLPCDLIARGLESARTEP
Ga0307471_1006161471	3300032180	Hardwood Forest Soil	AALRFLACTAACAALLAAGWGHPLGLVAGFTVLPCALVARGLAAAREGD
Ga0364926_108050_434_577	3300033812	Sediment	LRFAACTVACALFLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER
Ga0364938_031500_2_121	3300034114	Sediment	ACALFLTTGWAHPVALVAGFTVLPCDLIARGLAGARTER
Ga0364934_0043958_1472_1648	3300034178	Sediment	AAASAWLVGAGLRFAACTVACALFLATGWAHPVALVAGFTVLPCDLIARGLAGARTER
Ga0364941_057377_2_181	3300034417	Sediment	SAWIVGSGLRFGASLAACTLLLASGWAHPIALLFGFTLLPCDLIVRGLAAARAEARAEG
Ga0314792_145505_3_164	3300034667	Soil	WILGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG
Ga0314797_017028_949_1104	3300034672	Soil	LGAGLRFAVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG
Ga0314801_022660_931_1086	3300034676	Soil	LGAALRFVACAGACGLLLAYGWAHPIALVAGFTVLPCDLIARGLESARTEP
Ga0373958_0119506_1_135	3300034819	Rhizosphere Soil	AVCTAACAILLATGSAHPLALVAGFTVLPCDLIARGLMSARTEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064872

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences