Metagenome / Metatranscriptome Family F064871

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064871
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	57 residues
Representative Sequence	MHVYMKQQLAADRVAELRADAHRARHQRVRRARRASEASQALARREWRVLVHALLAR
Number of Associated Samples	87
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.75 %
% of genes near scaffold ends (potentially truncated)	12.50 %
% of genes from short scaffolds (< 2000 bps)	77.34 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.375 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.71% β-sheet: 0.00% Coil/Unstructured: 35.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02467	Whib	42.19
PF00892	EamA	41.41
PF00753	Lactamase_B	2.34
PF00581	Rhodanese	1.56
PF00899	ThiF	1.56
PF00580	UvrD-helicase	0.78
PF00355	Rieske	0.78
PF05237	Obsolete Pfam Family	0.78
PF00211	Guanylate_cyc	0.78
PF00082	Peptidase_S8	0.78
PF03704	BTAD	0.78
PF01883	FeS_assembly_P	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.78
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.78
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.78
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.25 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0820058	Not Available	1073	Open in IMG/M
3300000550\|F24TB_10087542	Not Available	526	Open in IMG/M
3300000858\|JGI10213J12805_10610031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	704	Open in IMG/M
3300003203\|JGI25406J46586_10007874	Not Available	4847	Open in IMG/M
3300003373\|JGI25407J50210_10023815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1589	Open in IMG/M
3300005562\|Ga0058697_10087891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300005562\|Ga0058697_10230481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005981\|Ga0081538_10002892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16389	Open in IMG/M
3300005981\|Ga0081538_10003066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15906	Open in IMG/M
3300005981\|Ga0081538_10238691	Not Available	703	Open in IMG/M
3300006049\|Ga0075417_10021298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2585	Open in IMG/M
3300006049\|Ga0075417_10499302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300006194\|Ga0075427_10012456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1291	Open in IMG/M
3300006196\|Ga0075422_10293243	Not Available	695	Open in IMG/M
3300006844\|Ga0075428_100029774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6039	Open in IMG/M
3300006844\|Ga0075428_100531467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300006844\|Ga0075428_101907932	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006845\|Ga0075421_100205483	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300006846\|Ga0075430_100599960	Not Available	908	Open in IMG/M
3300006853\|Ga0075420_100349242	Not Available	1280	Open in IMG/M
3300009147\|Ga0114129_11301116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300009156\|Ga0111538_10013140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10922	Open in IMG/M
3300009789\|Ga0126307_10007316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7868	Open in IMG/M
3300009789\|Ga0126307_10271308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1364	Open in IMG/M
3300009840\|Ga0126313_10014659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5076	Open in IMG/M
3300009840\|Ga0126313_10253627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300009840\|Ga0126313_11439671	Not Available	571	Open in IMG/M
3300010037\|Ga0126304_10756007	Not Available	658	Open in IMG/M
3300010038\|Ga0126315_10454980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300010145\|Ga0126321_1436921	Not Available	547	Open in IMG/M
3300010166\|Ga0126306_10121592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300010999\|Ga0138505_100005902	Not Available	1290	Open in IMG/M
3300014487\|Ga0182000_10083192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300014487\|Ga0182000_10103870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300014487\|Ga0182000_10277028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300014487\|Ga0182000_10517028	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300015265\|Ga0182005_1012573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2388	Open in IMG/M
3300017965\|Ga0190266_10133992	Not Available	1084	Open in IMG/M
3300018000\|Ga0184604_10091184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300018027\|Ga0184605_10071633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502	Open in IMG/M
3300018028\|Ga0184608_10073447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300018051\|Ga0184620_10053836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300018066\|Ga0184617_1002916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2781	Open in IMG/M
3300018072\|Ga0184635_10004474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4451	Open in IMG/M
3300018076\|Ga0184609_10043891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1887	Open in IMG/M
3300018078\|Ga0184612_10038052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2499	Open in IMG/M
3300018081\|Ga0184625_10023094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2990	Open in IMG/M
3300018422\|Ga0190265_10188212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2062	Open in IMG/M
3300018422\|Ga0190265_10997498	Not Available	959	Open in IMG/M
3300018422\|Ga0190265_13718457	Not Available	509	Open in IMG/M
3300018432\|Ga0190275_10369403	Not Available	1434	Open in IMG/M
3300018465\|Ga0190269_10097706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300018465\|Ga0190269_11310858	Not Available	579	Open in IMG/M
3300018466\|Ga0190268_10366369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300018466\|Ga0190268_11320274	Not Available	610	Open in IMG/M
3300018466\|Ga0190268_11565571	Not Available	578	Open in IMG/M
3300018469\|Ga0190270_10480677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300018476\|Ga0190274_10178447	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300018476\|Ga0190274_10634922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300019377\|Ga0190264_10111465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1313	Open in IMG/M
3300019377\|Ga0190264_10328819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	945	Open in IMG/M
3300019767\|Ga0190267_10114607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1103	Open in IMG/M
3300019767\|Ga0190267_10404923	Not Available	763	Open in IMG/M
3300019767\|Ga0190267_10425339	Not Available	752	Open in IMG/M
3300019867\|Ga0193704_1028077	Not Available	1140	Open in IMG/M
3300021080\|Ga0210382_10238441	Not Available	795	Open in IMG/M
3300021445\|Ga0182009_10707526	Not Available	546	Open in IMG/M
3300021951\|Ga0222624_1216137	Not Available	656	Open in IMG/M
3300021951\|Ga0222624_1282207	Not Available	585	Open in IMG/M
3300022534\|Ga0224452_1211347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300026652\|Ga0208713_100862	Not Available	763	Open in IMG/M
3300026665\|Ga0208070_100484	Not Available	671	Open in IMG/M
3300027018\|Ga0208475_1001995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1950	Open in IMG/M
3300027718\|Ga0209795_10186873	Not Available	582	Open in IMG/M
3300027750\|Ga0209461_10063330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300027750\|Ga0209461_10086252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300027750\|Ga0209461_10097729	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300027809\|Ga0209574_10130183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300027873\|Ga0209814_10000449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13394	Open in IMG/M
3300027907\|Ga0207428_10000731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37804	Open in IMG/M
3300027907\|Ga0207428_10114856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2068	Open in IMG/M
3300028587\|Ga0247828_10092713	Not Available	1413	Open in IMG/M
3300028708\|Ga0307295_10098091	Not Available	788	Open in IMG/M
3300028710\|Ga0307322_10127218	Not Available	668	Open in IMG/M
3300028718\|Ga0307307_10178067	Not Available	669	Open in IMG/M
3300028722\|Ga0307319_10096641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	945	Open in IMG/M
3300028722\|Ga0307319_10154335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300028744\|Ga0307318_10190995	Not Available	707	Open in IMG/M
3300028771\|Ga0307320_10110389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300028787\|Ga0307323_10012132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2891	Open in IMG/M
3300028796\|Ga0307287_10171564	Not Available	824	Open in IMG/M
3300028796\|Ga0307287_10258305	Not Available	659	Open in IMG/M
3300028812\|Ga0247825_10363331	Not Available	1018	Open in IMG/M
3300028814\|Ga0307302_10615371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300028878\|Ga0307278_10001597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11222	Open in IMG/M
3300028878\|Ga0307278_10008479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4852	Open in IMG/M
3300030496\|Ga0268240_10136248	Not Available	597	Open in IMG/M
3300030510\|Ga0268243_1003554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2648	Open in IMG/M
3300030510\|Ga0268243_1015324	Not Available	1465	Open in IMG/M
3300030510\|Ga0268243_1024241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300030510\|Ga0268243_1076188	Not Available	756	Open in IMG/M
3300030514\|Ga0268253_10212575	Not Available	634	Open in IMG/M
3300030516\|Ga0268255_10166750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300031548\|Ga0307408_100011090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5952	Open in IMG/M
3300031548\|Ga0307408_100119797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2037	Open in IMG/M
3300031548\|Ga0307408_100525578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031548\|Ga0307408_100733141	Not Available	891	Open in IMG/M
3300031548\|Ga0307408_100755020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031548\|Ga0307408_101827013	Not Available	581	Open in IMG/M
3300031731\|Ga0307405_10007372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5494	Open in IMG/M
3300031824\|Ga0307413_10333289	Not Available	1164	Open in IMG/M
3300031824\|Ga0307413_11162708	Not Available	669	Open in IMG/M
3300031901\|Ga0307406_11804652	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031903\|Ga0307407_10081056	Not Available	1963	Open in IMG/M
3300031903\|Ga0307407_10244274	Not Available	1226	Open in IMG/M
3300031903\|Ga0307407_10335934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300031911\|Ga0307412_10303953	Not Available	1262	Open in IMG/M
3300031995\|Ga0307409_100229932	Not Available	1680	Open in IMG/M
3300031996\|Ga0308176_11832733	Not Available	648	Open in IMG/M
3300032002\|Ga0307416_100273466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1660	Open in IMG/M
3300032005\|Ga0307411_11034110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300032005\|Ga0307411_12102365	Not Available	528	Open in IMG/M
3300032080\|Ga0326721_10034563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2082	Open in IMG/M
3300032080\|Ga0326721_10608952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300033550\|Ga0247829_10110293	Not Available	2086	Open in IMG/M
3300034172\|Ga0334913_004068	All Organisms → cellular organisms → Bacteria	4258	Open in IMG/M
3300034174\|Ga0334932_004377	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300034392\|Ga0334912_054549	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.50%
Host-Associated	Host-Associated	37.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.56%
Plants	Host-Associated → Plants	37.50%
Aquatic	Environmental → Aquatic	10.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.56%
Sediment	Environmental → Aquatic → Sediment	7.81%
Phylloplane	Host-Associated → Plants → Phylloplane	4.69%
Freshwater	Environmental → Aquatic → Freshwater	3.12%
Roots	Host-Associated → Plants → Roots	3.12%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.34%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.69%
Loam	Environmental → Terrestrial → Soil → Loam	3.12%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.34%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.34%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.34%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	14.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.03%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.25%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	3.12%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.34%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.34%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026652	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1117 (SPAdes)	Environmental	Open in IMG/M
3300026665	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN588 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034392	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 8HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08200583	2228664021	Soil	MHPYMMQQLAADHVAELRADAQRTRHQQVRRTQRASEVSQAPARRRWRILVNALFAR
F24TB_100875422	3300000550	Soil	MNDMHVYMKQQLIADHMAELRADAQRARNQRARRALRASEASXAPARRKWRVLVHALLAR
JGI10213J12805_106100312	3300000858	Soil	MHVYMQQQLVEDRVAELRADAQQVRHQRVRRAQRTSEADQSLARRQWRVLVQALMAR*
JGI25406J46586_100078741	3300003203	Tabebuia Heterophylla Rhizosphere	MHVQMKQQLVADHLAELRADAQRARHQRVRRAERSSEASQALARREWRVLVHALLAR*
JGI25407J50210_100238154	3300003373	Tabebuia Heterophylla Rhizosphere	MSHTPAGEVNTMHVYMLQQLADDRVAELRADARRARHQRVRRAQRASEASKAKVEREWRILVHALRER*
Ga0058697_100878912	3300005562	Agave	MHDYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHVLRER*
Ga0058697_102304812	3300005562	Agave	MHPDMQRQLAADRVTELRADAQRARHQRVLRARRAAEAHESQTRREWRTLVHALLAR*
Ga0081538_100028925	3300005981	Tabebuia Heterophylla Rhizosphere	MHVYMKQQLAADRIAELRADAQRARHQRARRARRAAEAGQAFARREWRVLIHALLAR*
Ga0081538_100030662	3300005981	Tabebuia Heterophylla Rhizosphere	MHVDMKYQMAKDHVAELRADADRARHQRVRRARRASEASQALARREWRVLVQALLAR*
Ga0081538_102386911	3300005981	Tabebuia Heterophylla Rhizosphere	MHVYLLQQLAADRVAELRADAQQARHQRARRARRAAEAGQAFARREWRVLLHALLAR*
Ga0075417_100212983	3300006049	Populus Rhizosphere	MHPYMMQQLAADHVAELRADAQRTRHQQVRRTQRASEVGRAPARRRWRILVHALFAR*
Ga0075417_104993022	3300006049	Populus Rhizosphere	MSAHTGGGGEHDMHPYVLQQLLADRAAELRADAQRTRHRQVHPTRRATEVSLALARREWRVLVRALFAR*
Ga0075427_100124562	3300006194	Populus Rhizosphere	MHPYMMQRLAADHVAELRADAQRTRHQQVRRTQRASEVGRAPARRRWRILVHALFAR*
Ga0075422_102932431	3300006196	Populus Rhizosphere	MSPHTGGGGEHDMHPYMMQQLAADHVAELRADAQRTRHQQVRRSQRASEVGRAPARRRWRILVHALFAR*
Ga0075428_1000297742	3300006844	Populus Rhizosphere	MHPYMMQQLAADHVAELRADAQRTRHQQVRRSQRASEVGRAPARRRWRILVHALFAR*
Ga0075428_1005314673	3300006844	Populus Rhizosphere	MHVYYMKQLADDRIAELRADAQRARHQHVRRARLAAEAGQAPARRKWRVLVHALVGR*
Ga0075428_1019079321	3300006844	Populus Rhizosphere	HVQMKQQLVADHLAELRADAQRARHQRVRRAERSSEASQALARRQWRVLVHALLAR*
Ga0075421_1002054831	3300006845	Populus Rhizosphere	MHVYMKQQLAADRVAELRDDAQRARHQRVRRARRASEASQALARREWRVLVHALLAR*
Ga0075430_1005999603	3300006846	Populus Rhizosphere	MHVYMKQQLAADHVAELGDDAHRARHQRVRRARRASEASQALARREWRVLVQALLAR*
Ga0075420_1003492422	3300006853	Populus Rhizosphere	MHVYMKQQLAADHVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVQALLAR*
Ga0114129_113011162	3300009147	Populus Rhizosphere	MHPYVLQQLLADRAAELRADAQRTRHRQVHPTRRATEVSLALARREWRVLVRALFAR*
Ga0111538_100131408	3300009156	Populus Rhizosphere	MHPYMMQQLAADHAAELRADAQRTRHQQVRRSQRASEVGRAPARRRWRILVHALFAR*
Ga0126307_100073164	3300009789	Serpentine Soil	MYVFMNQQLVADRTAELRTDADRARNQRARRTQRASEASQALARREWRVLVQALVAR*
Ga0126307_102713082	3300009789	Serpentine Soil	MHVYMKQQLAVDRVAELRADARRAQHQRVRRARRASEASQALARREWRILVHALLAR*
Ga0126313_100146592	3300009840	Serpentine Soil	MHDYMLQQLAADRAAELRADAQRVRHQRVRRAQRASEASKARIEREWRILVHALRER*
Ga0126313_102536272	3300009840	Serpentine Soil	MHTQMMQQLVADRLAELRADARRSRHQRVRRAERSSAAGQALARREWRVLVHALLAR*
Ga0126313_114396711	3300009840	Serpentine Soil	MHVQMKQQLVADHLAELRTEAQRARHQRARRAQRSSEASSAPARREWRILVNALLAR*
Ga0126304_107560071	3300010037	Serpentine Soil	MYVFMNQQLVADRTAELRTDADRARNQRARRTQRASEASQALARREWRVLVQALVA
Ga0126315_104549802	3300010038	Serpentine Soil	MHDYMLQQLAADRAAELRADAQRVRHQRVRRAQRASEASKARTEREWRMLVHALRER*
Ga0126321_14369212	3300010145	Soil	MHPYVMQQLAADRVAELRADAQRTRHQRVRRAQPISEASQSLARREWRVLLHALRAR*
Ga0126306_101215923	3300010166	Serpentine Soil	MYVDMNQQLVADRKAELRADAHRARNQRARRTQRASEASQALARREWRVLVQALVAR*
Ga0138505_1000059024	3300010999	Soil	VNTMHVYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHALRER
Ga0182000_100831922	3300014487	Soil	MHVHMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRGLVHALRER*
Ga0182000_101038702	3300014487	Soil	MYVDMKHQLAEDRVAELRAEADRARNQRGRRAQRSSETGQALTRRKWRVLVQALTAR*
Ga0182000_102770282	3300014487	Soil	MHSFMQQLADDRLAELRVDAHRARHQRARRAQRASEASQAMARREWRVLVQALMAR*
Ga0182000_105170282	3300014487	Soil	QMKQQLVADHLAELRADAQRARHQRLRRAERSSEAGQALARREWRVLVHALLAR*
Ga0182005_10125734	3300015265	Rhizosphere	MHVYMLQQLAADRVAELRADAQRVRYQRARRDQRASEASKARIEREWRILVHALRER*
Ga0190266_101339923	3300017965	Soil	MHVYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHALRER
Ga0184604_100911842	3300018000	Groundwater Sediment	MHVYMKQQLVEDHVAELRADAQRARHRHDRRVERSSEASQALARREWRVLVHALLAR
Ga0184605_100716332	3300018027	Groundwater Sediment	MHVYMLQQLAADRVAELQADAQRVRHQRVLHARRHAEADQAPVRRKWRVLVHALLAR
Ga0184608_100734472	3300018028	Groundwater Sediment	MHVYMKQQLVENHLAELRADAQRARHQRDRRAERSSEASKALARREWRVLVHALLAR
Ga0184620_100538362	3300018051	Groundwater Sediment	MHVYMKQQLVENHVAELRADAQRARHQRDRRAERSSEASKALARREWRVLVHALLAR
Ga0184617_10029164	3300018066	Groundwater Sediment	MHVDMKYQLAQDRVAELRADAHRARNQRGRRAKRASEASQALARREWRVLVQALVAR
Ga0184635_100044744	3300018072	Groundwater Sediment	MHVYMKQQLAADRVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVHALLTR
Ga0184609_100438912	3300018076	Groundwater Sediment	MHVDMKYQLAQDRVAELRADAHRARNQRARRAQRASEASQALARREWRVLVRALMAR
Ga0184612_100380522	3300018078	Groundwater Sediment	MHVYMKQQLAADRVAELRDDAHRARHQRVRRARRASEASQALARREWRGLVPPPLAR
Ga0184625_100230944	3300018081	Groundwater Sediment	MHVYMKQQLAADRVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVHALLAR
Ga0190265_101882123	3300018422	Soil	MHSFIQQLASDRLAELRVDAHRARHQRARRAQRASEAGQALARREWRVLAQALMAR
Ga0190265_109974981	3300018422	Soil	MHSFMQQLAEDRLAELRVDAHRARHRRARRAQRASEASQAMARREWRVLVQALMAR
Ga0190265_137184572	3300018422	Soil	MHVYMKQQLAEDRVAELRADAHRARHQRVRRAQRASEASQALARREWRVLVQALMAR
Ga0190275_103694034	3300018432	Soil	MSDMHVYTKQQLVADRVAELQADAQRVRHQRARRAQRASQASQSWVRREWRVLVHALLAR
Ga0190269_100977062	3300018465	Soil	MHVYMKQQLAADRVAELRDDAHRARHQRVRRARRASEASQALARREWRVMVHALLAR
Ga0190269_113108581	3300018465	Soil	MHVDMKHQLAEDRVAELRAEADRARNQRGRRTQRSSEASQALARRKWRVLVQALTAR
Ga0190268_103663692	3300018466	Soil	MHVYMKQQLAADRVAELRDDAYRARHQRVRRARRASEASQALARREWRVLVQALLAR
Ga0190268_113202742	3300018466	Soil	MHVYMKQQLASDRVAELRADAHRARHQRVRRAQRASQASQALARREWRVLVQALMAR
Ga0190268_115655712	3300018466	Soil	MHPQMNQQLVADHLAELRADAQRARHQRVLRAQRSSEPGQAPAPRKWRVLVHALLAR
Ga0190270_104806772	3300018469	Soil	MHVYMRQQLAADRVAELRDDAHRARHQRVRRARRASEASQALARREWRVMVHALLAR
Ga0190274_101784473	3300018476	Soil	MHIYMQQQLVQDRVTELRADAQRARHQRVRRAQRTSEADQSLARRQWRVLVQALMAR
Ga0190274_106349222	3300018476	Soil	MHVYMKQQLAADRVAELRADAHRARHQRVRRAQRAAEASQALARREWRVLVHALLAR
Ga0190264_101114652	3300019377	Soil	MHSFMQQLAEDRLAELRVDAHRARHQRARRAQRASEASQAMARREWRVLVQALMAR
Ga0190264_103288192	3300019377	Soil	MHVYMKQQLAADRVAELRADAHRARHQRVRRARRASEASQALARREWRVLVHALLAR
Ga0190267_101146072	3300019767	Soil	MHVFMNQQLVADRKAELRADAHRARNQRARRTQRASEASQALARREWRVLVQALVAR
Ga0190267_104049233	3300019767	Soil	MHDYMLQQLAADRVAELRADAQRVRHQRVRRDQRASEASKARIEREWRMLVHALRER
Ga0190267_104253392	3300019767	Soil	MHVYMKQQLASDRVAELRADAHRARHQRVRRAQRASEASQAIARREWRVLVQALMAR
Ga0193704_10280773	3300019867	Soil	MHVYMKRQLVEDHVAELRADAQRARHQRDRRAERSSEASKALARREWRVLVHALLAR
Ga0210382_102384411	3300021080	Groundwater Sediment	MHVYMNQQLVEDHVAELRADAQRARHRHDRRVERSSEASQALARREWRVLVHALLAR
Ga0182009_107075262	3300021445	Soil	MHVYMLQQLAADRVAELRADAQRVRHQRVRRDQRASEASKARIEREWRMLVHALRER
Ga0222624_12161372	3300021951	Groundwater Sediment	MHVYMLQQLAADRVAELQADAQRARHQRVLHTRRHAEADQAPVRRKWRVLVHALLAR
Ga0222624_12822071	3300021951	Groundwater Sediment	MHVFMNQQLVADRKAELRADAHRARNQRARRAQRASEASQALARREWRVLVQALVAR
Ga0224452_12113472	3300022534	Groundwater Sediment	MHVDMKYQLAQDRVAELRADAHRARNQRGRRAQRASEASQALARREWRVLVQALVAR
Ga0208713_1008621	3300026652	Soil	MHDYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASEARIDREWRMLVHALRER
Ga0208070_1004841	3300026665	Soil	MHVYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWR
Ga0208475_10019953	3300027018	Soil	MHVYMLQQLAADRVAELREDAQRVRHQRVLHARRVEADQTPVRRKWRVLVHALLAR
Ga0209795_101868733	3300027718	Agave	MHVYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVH
Ga0209461_100633302	3300027750	Agave	MHPDMQRQLAADRVTELRADAQRARHQRVLRARRAAEAHESQTRREWRTLVHALLAR
Ga0209461_100862522	3300027750	Agave	MYVYMNQQLAADHIAELRADAQRARHQQVRRAKRASEASQALARREWRILVHALLAR
Ga0209461_100977291	3300027750	Agave	MHTQMKQQLVADHLAELRAEAQRARHLRARRAQRSSEASSALTRREWRVLVHALLAR
Ga0209574_101301832	3300027809	Agave	MHPDMQRQLAADRVAELRADAQRARHQRVLRARRAAEAHEPLARREWRTLVHALLTR
Ga0209814_1000044913	3300027873	Populus Rhizosphere	MHPYMMQQLAADHVAELRADAQRTRHQQVRRTQRASEVGRAPARRRWRILVHALFAR
Ga0207428_100007315	3300027907	Populus Rhizosphere	MHPYMMQQLAADHVAELRADAQRTRHQQVRRSQRASEVGRAPARRRWRILVHALFAR
Ga0207428_101148563	3300027907	Populus Rhizosphere	MHVYYMKQLADDRIAELRADAQRARHQHVRRARLAAEAGQAPARRKWRVLVHALVGR
Ga0247828_100927134	3300028587	Soil	MHVYMKQQLAADHVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVQALLAR
Ga0307295_100980913	3300028708	Soil	MHVYMKRQLVEDHVAELRADAQRARHQRDRRVERTSEASQALARREWRVLVHALLAR
Ga0307322_101272181	3300028710	Soil	MHVYMKQQLVQDHLAELRADAQRARHQRDRRVERSSEASQALARREWRVLVHALLAR
Ga0307307_101780671	3300028718	Soil	MHVYMKQQLVEDHLAELRADAQRARHQRDRRVERSSEASQALARREWRVLVHALLAR
Ga0307319_100966412	3300028722	Soil	MHVFMNQQLVADRKAELRADAHQARNQRARRTQRASEASQALARREWRVLVQALVAR
Ga0307319_101543352	3300028722	Soil	MHVDMKYQLAQDRVAELRADAHRARNQRGRRAQRASEASQALARREWRVLVQSLMAR
Ga0307318_101909952	3300028744	Soil	MHVDMEYQLAQDRVAELRADAHRARNQRGRRAQRASEASQALARREWRVLVQSLMAR
Ga0307320_101103892	3300028771	Soil	MHVFMNQQLVADRKAELRANAHQARNQRARRTQRASEASQALARREWRVLVQALVAR
Ga0307323_100121323	3300028787	Soil	MHVYMKQQLVEDHVAELRADAQRARHQRDRRVERTSEASQALARREWRVLVHALLAR
Ga0307287_101715641	3300028796	Soil	MHVYMKQQLVEDHVAELRADAQRARHQRDRRVERSSEASQALARREWRVLVHALLAR
Ga0307287_102583051	3300028796	Soil	MHVFMNQQLVADRKAELRANAHQARNQRARRTQRASEASQALARREWRVLVQALVA
Ga0247825_103633313	3300028812	Soil	MHVYMKQQLAADHVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVQA
Ga0307302_106153712	3300028814	Soil	VYMKQQLVEDHVAELRADAQRARHQRDRRVERSSEASQALARREWRVLVHALLAR
Ga0307278_100015977	3300028878	Soil	MHVLTKQQLVEDHMARLRADAQRVRHQRDHRAERASEASEALSRREWRVLVQALLAR
Ga0307278_100084793	3300028878	Soil	MHVSMKQQLVDDHLAALRADAQRARHQRARRAEQSSEAGHALEWREWRVLVNALLAR
Ga0268240_101362482	3300030496	Soil	MHVQMNQQLVADHLAELRADAQRARHQRVRRAERSSEASRALARREWRVLVHALLAR
Ga0268243_10035545	3300030510	Soil	MHDYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRVLVHALRER
Ga0268243_10153244	3300030510	Soil	MHMQMNQQLVADHLAELRADAQRARHQRARRSQRSSEAGQALARREWRVLVHALLAR
Ga0268243_10242412	3300030510	Soil	QMKQQLVADHLAELRADAQRARHQRLRRAERSSEAGQALARREWRVLVHALLAR
Ga0268243_10761881	3300030510	Soil	MHSFMQQLADDRLAELRVDAHRARHQRARRAQRASEASQAMARREWRVLVQALMAR
Ga0268253_102125751	3300030514	Agave	MHDYMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHVLRER
Ga0268255_101667502	3300030516	Agave	YMLQQLAADRVAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHALRER
Ga0307408_1000110903	3300031548	Rhizosphere	MHVQMKQQLVADHLAEMRADAHRARHQRARRAERSSEASKALARREWRVLVHALLAR
Ga0307408_1001197973	3300031548	Rhizosphere	MYVFMNQQLVADRTAELRTDADRARNQRARRTQRASEASQALARREWRVLVQALVAR
Ga0307408_1005255782	3300031548	Rhizosphere	MHVYMKQQLAVDRVAELRADARRAQHQRVRRARRASEASQALARREWRILVHALLAR
Ga0307408_1007331413	3300031548	Rhizosphere	MHDYMLQQLAADRAAELRADAQRVRHQRVRRAQRASEASKARIEREWRMLVHALRER
Ga0307408_1007550201	3300031548	Rhizosphere	HDMHVQMTQQLVADHLAELRVDAQRARHQQARRAERSSEAGQALARREWRVLVHALLAR
Ga0307408_1018270132	3300031548	Rhizosphere	MHTQMMQQLVADRLAELRADARRSRHQRVRRAERSSAAGQALARREWRVLVHALLAR
Ga0307405_100073725	3300031731	Rhizosphere	MRDTGGGGEHDMHVQMKQQLVADHLAEMRADAHRARHQRARRAERSSEASKALARREWRVLVHALLAR
Ga0307413_103332891	3300031824	Rhizosphere	MSDMHVYMKQQLVADHMAELRADAQRVRHQHERRAQRASEASQAPARRKWRVLVQALLAR
Ga0307413_111627081	3300031824	Rhizosphere	MHVFMMQQLAADHIAELRADAQRVRHQRVLRAERASEASQTLVRREWRILVHALRAR
Ga0307406_118046522	3300031901	Rhizosphere	MHVYMKQQLAADRVSELRADAHRVRHQRVRRARRASEASQALARREWRVLVQALLAR
Ga0307407_100810564	3300031903	Rhizosphere	MHTQMMQQLVADRLAELRADARRSRHQRVRRAERSSAAGQALARREWR
Ga0307407_102442741	3300031903	Rhizosphere	MHVQMTQQLVADHLAELRVDAQRARHQQARRAERSSEAGQALARREWRVLVHALLAR
Ga0307407_103359342	3300031903	Rhizosphere	MHPQMMQQLAADHMAELRADARRARHQRVLRAQRSSEAGQSLARRQWRVLVHALLAR
Ga0307412_103039534	3300031911	Rhizosphere	MHDYMLQQLAADRAAELRADAQRVRHQRVRRAQRASEASKARTEREWRMLVHALRER
Ga0307409_1002299324	3300031995	Rhizosphere	MHTQMMQQLVADRLAELRADARRSRHQRVRRAERSSAAGQALARREWRVQVHAHLAR
Ga0308176_118327331	3300031996	Soil	MHVYMKQQLVEDHVAELRADAQRARHQRARRVERSAEAGQALGRREWRVLVHALLAR
Ga0307416_1002734664	3300032002	Rhizosphere	MHPQMMQQLAADHVAELRADARRARHQRVLRAQRSSEVGQSLARRQWRVLVHALLAR
Ga0307411_110341102	3300032005	Rhizosphere	MKQQLIADHLAELRADAQRARHQRARRAERSSQAGQALARRQWRVLVHALLAR
Ga0307411_121023652	3300032005	Rhizosphere	MHTQMMQQLVADRLAELRADARRSRHQRVRRAERSSAAGQALARREWRVLVNALLAR
Ga0326721_100345632	3300032080	Soil	MHLQMKQQLVADHLAELRADAQRARHQRVRRAERSSEAGQALARREWRVLVHALLAR
Ga0326721_106089522	3300032080	Soil	MHIYMNQQLAKDRVAELRADAHRARHQRVRRARRASEASQALARREWRILVQALMAR
Ga0247829_101102931	3300033550	Soil	MHVYMKQQLAADHVAELRDDAHRARHQRVRRARRASEASQALARREWRVLVQALLA
Ga0334913_004068_1652_1825	3300034172	Sub-Biocrust Soil	MHVYMNQQLAADHIAELRADAQRARNQRVRRAKRTSEASQALAQREWRILVHALLAR
Ga0334932_004377_738_911	3300034174	Sub-Biocrust Soil	MHVYMLQQLADDRVAELRADAQRVRHQRVRRAQRASEASKAKVEREWRILVHALRER
Ga0334912_054549_371_520	3300034392	Sub-Biocrust Soil	MHTQMKQQLVLDHLAELRADAQRARHQRDRRTERSSEAGQALARRQWRVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences