Metagenome Family F064824

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064824
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	127 residues
Representative Sequence	VWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVRKSDEERMVHAATMGVIAGSSQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDQPKPCSEWR
Number of Associated Samples	88
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.15 %
% of genes near scaffold ends (potentially truncated)	96.09 %
% of genes from short scaffolds (< 2000 bps)	92.19 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.469 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (16.406 % of family members)
Environment Ontology (ENVO)	Unclassified (50.781 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.96% β-sheet: 0.00% Coil/Unstructured: 43.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF06751	EutB	4.69
PF03950	tRNA-synt_1c_C	2.34
PF00749	tRNA-synt_1c	2.34
PF00271	Helicase_C	1.56
PF00144	Beta-lactamase	1.56
PF01381	HTH_3	1.56
PF07993	NAD_binding_4	1.56
PF08241	Methyltransf_11	0.78
PF02357	NusG	0.78
PF14329	DUF4386	0.78
PF00654	Voltage_CLC	0.78
PF12770	CHAT	0.78
PF04191	PEMT	0.78
PF01494	FAD_binding_3	0.78
PF00535	Glycos_transf_2	0.78
PF01738	DLH	0.78
PF00892	EamA	0.78
PF04273	BLH_phosphatase	0.78
PF04255	DUF433	0.78
PF02604	PhdYeFM_antitox	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.69
COG4303	Ethanolamine ammonia-lyase, large subunit	Amino acid transport and metabolism [E]	4.69
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.56
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.56
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.78
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.78
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.78
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.78
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.78
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.78
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.78
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	0.78
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
All Organisms	root	All Organisms	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
cellular organisms	root	All Organisms → cellular organisms	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.56 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.56 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.56 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.78 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.78 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Cylindrospermum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Cylindrospermum	0.78 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
unclassified Cylindrospermum	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Cylindrospermum → unclassified Cylindrospermum	0.78 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Cylindrospermum sp. FACHB-282	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Cylindrospermum → unclassified Cylindrospermum → Cylindrospermum sp. FACHB-282	0.78 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2276809	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1272	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105674848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1389	Open in IMG/M
3300000559\|F14TC_103615214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1005	Open in IMG/M
3300003228\|JGI26300J46817_101315	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300004156\|Ga0062589_100408098	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300004463\|Ga0063356_101474095	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1006	Open in IMG/M
3300004480\|Ga0062592_101523006	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300004643\|Ga0062591_100875223	Not Available	839	Open in IMG/M
3300005289\|Ga0065704_10159759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1363	Open in IMG/M
3300005336\|Ga0070680_100716229	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005341\|Ga0070691_10784635	Not Available	579	Open in IMG/M
3300005344\|Ga0070661_100536525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300005353\|Ga0070669_100561043	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300005353\|Ga0070669_101348219	Not Available	618	Open in IMG/M
3300005364\|Ga0070673_100446219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300005364\|Ga0070673_102167527	Not Available	528	Open in IMG/M
3300005365\|Ga0070688_100988966	Not Available	668	Open in IMG/M
3300005438\|Ga0070701_10260697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300005444\|Ga0070694_100304858	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300005456\|Ga0070678_102199808	Not Available	523	Open in IMG/M
3300005458\|Ga0070681_10598305	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005539\|Ga0068853_100048586	All Organisms → cellular organisms → Bacteria	3645	Open in IMG/M
3300005543\|Ga0070672_101073561	Not Available	715	Open in IMG/M
3300005549\|Ga0070704_100135152	Not Available	1917	Open in IMG/M
3300005564\|Ga0070664_100631292	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005615\|Ga0070702_100166499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300005615\|Ga0070702_101736626	Not Available	520	Open in IMG/M
3300005616\|Ga0068852_102862620	Not Available	500	Open in IMG/M
3300005617\|Ga0068859_102420122	Not Available	578	Open in IMG/M
3300005617\|Ga0068859_102632189	Not Available	553	Open in IMG/M
3300005618\|Ga0068864_100550325	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005618\|Ga0068864_101230823	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300005618\|Ga0068864_101966680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005618\|Ga0068864_102281367	Not Available	548	Open in IMG/M
3300005719\|Ga0068861_100067591	All Organisms → cellular organisms → Bacteria	2759	Open in IMG/M
3300005841\|Ga0068863_101361256	Not Available	717	Open in IMG/M
3300005842\|Ga0068858_100158484	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300005842\|Ga0068858_100180025	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300005843\|Ga0068860_101926043	Not Available	613	Open in IMG/M
3300006237\|Ga0097621_101589626	Not Available	621	Open in IMG/M
3300006755\|Ga0079222_11469121	Not Available	636	Open in IMG/M
3300006806\|Ga0079220_10599175	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	783	Open in IMG/M
3300006852\|Ga0075433_10039507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4081	Open in IMG/M
3300006853\|Ga0075420_101138436	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006871\|Ga0075434_102549664	Not Available	512	Open in IMG/M
3300006881\|Ga0068865_101421522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300006904\|Ga0075424_101982532	Not Available	614	Open in IMG/M
3300006904\|Ga0075424_102298120	Not Available	567	Open in IMG/M
3300006954\|Ga0079219_10233487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300007076\|Ga0075435_100685510	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300009098\|Ga0105245_12791276	Not Available	541	Open in IMG/M
3300009098\|Ga0105245_12874197	Not Available	534	Open in IMG/M
3300009100\|Ga0075418_12696649	Not Available	543	Open in IMG/M
3300009101\|Ga0105247_11514999	Not Available	547	Open in IMG/M
3300009148\|Ga0105243_10802470	Not Available	928	Open in IMG/M
3300009148\|Ga0105243_11460791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009148\|Ga0105243_12906366	Not Available	519	Open in IMG/M
3300009174\|Ga0105241_12135021	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009177\|Ga0105248_11501580	Not Available	763	Open in IMG/M
3300009551\|Ga0105238_11371031	Not Available	734	Open in IMG/M
3300010373\|Ga0134128_10044101	All Organisms → cellular organisms → Bacteria	5189	Open in IMG/M
3300010397\|Ga0134124_10794378	Not Available	945	Open in IMG/M
3300010397\|Ga0134124_10857350	Not Available	912	Open in IMG/M
3300010397\|Ga0134124_11020994	Not Available	840	Open in IMG/M
3300010397\|Ga0134124_11039334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Cylindrospermum → unclassified Cylindrospermum → Cylindrospermum sp. FACHB-282	833	Open in IMG/M
3300010397\|Ga0134124_11307326	Not Available	748	Open in IMG/M
3300010397\|Ga0134124_11720885	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010397\|Ga0134124_11725256	Not Available	659	Open in IMG/M
3300010397\|Ga0134124_12785146	Not Available	533	Open in IMG/M
3300010397\|Ga0134124_12844504	Not Available	528	Open in IMG/M
3300010399\|Ga0134127_11460761	Not Available	756	Open in IMG/M
3300010399\|Ga0134127_11774136	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300010399\|Ga0134127_13102880	Not Available	542	Open in IMG/M
3300010400\|Ga0134122_11224202	Not Available	753	Open in IMG/M
3300010401\|Ga0134121_10614957	Not Available	1018	Open in IMG/M
3300010403\|Ga0134123_10584263	Not Available	1070	Open in IMG/M
3300010403\|Ga0134123_11043770	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012212\|Ga0150985_120501035	Not Available	645	Open in IMG/M
3300012955\|Ga0164298_11217916	Not Available	571	Open in IMG/M
3300012958\|Ga0164299_10885209	Not Available	646	Open in IMG/M
3300012958\|Ga0164299_11573307	Not Available	516	Open in IMG/M
3300013100\|Ga0157373_10734410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300013306\|Ga0163162_10288706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1772	Open in IMG/M
3300014325\|Ga0163163_10062183	All Organisms → cellular organisms → Bacteria	3699	Open in IMG/M
3300014968\|Ga0157379_11792814	Not Available	603	Open in IMG/M
3300014969\|Ga0157376_13051379	Not Available	507	Open in IMG/M
3300015372\|Ga0132256_103134201	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300015372\|Ga0132256_103286540	Not Available	544	Open in IMG/M
3300015374\|Ga0132255_104730987	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300015374\|Ga0132255_105420765	Not Available	540	Open in IMG/M
3300021445\|Ga0182009_10033996	Not Available	2059	Open in IMG/M
3300021445\|Ga0182009_10046717	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300021445\|Ga0182009_10687222	Not Available	553	Open in IMG/M
3300021445\|Ga0182009_10728261	Not Available	539	Open in IMG/M
3300025315\|Ga0207697_10482434	Not Available	548	Open in IMG/M
3300025900\|Ga0207710_10428557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300025908\|Ga0207643_10092678	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300025914\|Ga0207671_11304443	Not Available	565	Open in IMG/M
3300025918\|Ga0207662_10276383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300025918\|Ga0207662_11136409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300025935\|Ga0207709_10864534	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300025935\|Ga0207709_11785935	Not Available	511	Open in IMG/M
3300025938\|Ga0207704_11732970	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300025941\|Ga0207711_10205460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1798	Open in IMG/M
3300025942\|Ga0207689_11404288	Not Available	585	Open in IMG/M
3300025945\|Ga0207679_11688067	Not Available	580	Open in IMG/M
3300025960\|Ga0207651_12120711	Not Available	505	Open in IMG/M
3300026035\|Ga0207703_10170284	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300026035\|Ga0207703_11571168	Not Available	633	Open in IMG/M
3300026075\|Ga0207708_10097754	Not Available	2269	Open in IMG/M
3300026089\|Ga0207648_11130510	Not Available	735	Open in IMG/M
3300026095\|Ga0207676_10437616	Not Available	1230	Open in IMG/M
3300026095\|Ga0207676_11502774	Not Available	670	Open in IMG/M
3300026095\|Ga0207676_12489181	Not Available	514	Open in IMG/M
3300026118\|Ga0207675_100562565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1140	Open in IMG/M
3300026118\|Ga0207675_102705222	Not Available	504	Open in IMG/M
3300027765\|Ga0209073_10440536	Not Available	541	Open in IMG/M
3300027775\|Ga0209177_10137055	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300027907\|Ga0207428_10011967	All Organisms → cellular organisms → Bacteria	7637	Open in IMG/M
3300028380\|Ga0268265_10737758	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300028380\|Ga0268265_11618654	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300031716\|Ga0310813_11065389	Not Available	740	Open in IMG/M
3300031716\|Ga0310813_11968724	Not Available	551	Open in IMG/M
3300031716\|Ga0310813_12229717	Not Available	519	Open in IMG/M
3300031716\|Ga0310813_12253491	Not Available	516	Open in IMG/M
3300031996\|Ga0308176_12220505	Not Available	586	Open in IMG/M
3300032000\|Ga0310903_10753573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.81%
Environmental	Environmental	42.19%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.81%
Terrestrial	Environmental → Terrestrial	42.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	28.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.12%
Roots	Host-Associated → Plants → Roots	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.53%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	24.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	16.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	13.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.12%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003228	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22768091	3300000033	Soil	QPTEIPQVQLPSRSTTSASVLYWRQQLLLIQRAQREYVRKSDEERMVHAATMGVINGASTSAVLESARQARVTAESRKAEIRKRAFVPMATSNGTRPCSEWTVAPR*
INPhiseqgaiiFebDRAFT_1056748483	3300000364	Soil	PTEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATLGVISGTSPSAVFESARQARVIAESRRSEIRKRAFVPVATSSDRPRSCSEWTVNHQ*
F14TC_1036152141	3300000559	Soil	QVFARMKIAEADFRELVRLKSEVEHAEHDARMRITENINRVHQQATEIPKAQLPTRPTTSAGVLYWRQQLLMMQRAQREFVKKSDEERMQHAATMGVIQGGASSSAALESARKARAAAESRKAEIRKRAFVPVRSTSDQPKPC
JGI26300J46817_1013152	3300003228	Soil	ELMWLKSEVEHAEHDARMMITDNINRVDQHPTEIPQAQMPTRATTSAGVRYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVSGSSQSAVLESARQARATAESRQTEIRKRAFVALQTSSDLPKPCSAWATGSR*
Ga0062589_1004080981	3300004156	Soil	ARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVQKSDEERMVHAATMGVINGASQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDQPRPCSEWR*
Ga0063356_1014740951	3300004463	Arabidopsis Thaliana Rhizosphere	GHAEHDARMMITENINRVDQQATEIPQAQLPTRPTTSAGVLYWRQQLLMMQRAQREFVKKSDQERMAHAATMGVIAGGANQSAVLESARKARAAAESRKAEIHKRAFVPARTSSDQPKPCSEWS*
Ga0062592_1015230062	3300004480	Soil	MITDNINRVDQQSTEIPQAQLPTRSTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQTAVLESARLARASAESRKAEIRKRAFVPVTTSSDQPKPCSEWR*
Ga0062591_1008752231	3300004643	Soil	EHAEHDARMMITDNINRVDQQATEIPQAQLPTRPTTSAGVLYWRQQLLLMQRAQREFVKKSDEERMVHAATMGVVSGASQSAVLESARQARATAESRSAEIRRRAFVPVTSSSGQPKSCSEWNR*
Ga0065704_101597591	3300005289	Switchgrass Rhizosphere	RLAKILKNPKTTEALAGMKITEADFRELFWLKSEVEHAEHDARMMITDNINRVDQQSTDIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARQARATAESRRAEIRRRAFVPLTTSSDRPKPCSEWR*
Ga0070680_1007162291	3300005336	Corn Rhizosphere	MITENINRVDQQATEIPQAQLSTRPTNSAGVLYWRQQLLLMQRAQREFVKKSDEERMKHAATMGVIAGGTSQSAMLESARNARAAAESRKVEIRKRAFIPVKTSSDQPKPCSEWT*
Ga0070691_107846351	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GDLRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQVQLPTRPTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASASAVLESARQARATAESRKAEIRKRAFVLVTTSSDQPKPCSEWR*
Ga0070661_1005365251	3300005344	Corn Rhizosphere	AEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSLGVLYWRQQLLLIQRAQREFVRKSDEERMVHAATMGVIAGSSQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDQPKPCSEWR*
Ga0070669_1005610431	3300005353	Switchgrass Rhizosphere	LVWLKSEVEHAEHDARMMITANINRVDQQATEIPQAQLPARPTNSAGVLYWRQQLLLMQRAQIEYVKKSDEERMVHAATMGVVSGTSSSAALESARQARAAAESRRAEIRKRAFVNAVTSGSDRPKPCSELSMGPR*
Ga0070669_1013482191	3300005353	Switchgrass Rhizosphere	DFRELFWLKSEVEHAEHDARMMITENMNRVDQHDTEIPQAQLPTRPTTSAGVRYWRQQLLLIQRAQREFVKKSDQERMIHAASMTVISGGSQSAVFESARLAQAAAESRKAEIRKRAFVPVASSDRLKPCSAWSASLR*
Ga0070673_1004462192	3300005364	Switchgrass Rhizosphere	TQAVAGMMIAEADFLELFWLKSEVEYAEHDARMMITDNINRVDQHETEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVNKSDQERMVHAASMGIISGSSQSAVLESARLARATAESRRAEIRKRAFVPPTTSSDRSKPCSAWSARLG*
Ga0070673_1021675271	3300005364	Switchgrass Rhizosphere	WLKSEVEHAEHDARMMITDNINRVDQQATEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQREFVTKSDKERMVHAATMGVMAGASQSAVLESARQAQATAESRRAEIRKRAFVPVTSPTDRAKPCSEWAMGR*
Ga0070688_1009889662	3300005365	Switchgrass Rhizosphere	RIKIREADLRELVWLKSEVEHAEHDARMMVTDNINRVDHDPTEIPQAQLPTRPSASPAVMYWRQQLLLMQRAQRDFVRKSDAERMTHVPTMGVITGAQPQAAVLESARRARAAAESRKAQIRKRAFIPAATASDPLTSCPG*
Ga0070701_102606972	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LKNPKATQVLAGMKITESDFRELVWLKLEVEHAEHDARMMITDNINRVDQQSTEIPQAQVPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVISGASQSAVLESARLARATAESRKAEIRKRAFVPVITSSDQPKPCSEWR*
Ga0070694_1003048581	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QWTEIPQAKLPTRPTHSAGVLYWREQLLMIQKVQRQFVMKSDQERIKHAATMGVIGGMSQSAVLESARQARATAESRKAEILKRAFVPVTTSSDRPRPCSEWR*
Ga0070678_1021998081	3300005456	Miscanthus Rhizosphere	WLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGSSSSAALESARLARATAESRKAEIRRRAFVPVTSSSDRLRPCSELAAGPR*
Ga0070681_105983052	3300005458	Corn Rhizosphere	QQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVISGASPSAVLESARQARVTAESRKAEIRKRAFVPVTIPSDRPRPCSELASSPR*
Ga0068853_1000485861	3300005539	Corn Rhizosphere	NRVDQQDTEIPQAQVPTRPTRSAGVLYWRQQLLLIQRAQRQFVTKSDEERMVHAATMGVINGASSSAALESARLARAAAESRKAEIRKRAFVPVTTSSNAPKPCSEWR*
Ga0070672_1010735611	3300005543	Miscanthus Rhizosphere	MITDNINRVDQQQTEIPQAQLPTRRTTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVSGASNSAMLESAVTARATAESRKAEIRKRAFVPVKTSSDQPKPCSEWAADLR*
Ga0070704_1001351521	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMITDNINRVDQQPTEIPQVQLPTRSTISAGVLYWRQQLLLMQRAQREYVKKSDEERMVHAATMGVVSGVSQSAVLESARQARATAESRKAEIRKRAFVPMTTSSSEIKPCSEWTVATR*
Ga0070664_1006312922	3300005564	Corn Rhizosphere	MMITDNINRVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARRARATAESRKAEIRKRAFIPVASSSDRQRPCSELAAGPR*
Ga0070702_1001664991	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGVSQSAVLESARLARASAESRKAEIRKRAFVPVTTSSAPAKPCSEWR*
Ga0070702_1017366261	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	QALAGMKITESDFRELVWLKSEVEHAEHDARMMITDNINRVDQQTTEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQREFVKKSDEERMTHAATMGVVGSRASQSAVLESARLARATAEARKLEIRKRAFVPVTTSSDRPKPCSEWK*
Ga0068852_1028626201	3300005616	Corn Rhizosphere	QQPTEVPQAQLPTRPTTSAGVLYWRQQLLLMQRAQREFVKRSDEERMTHAATMGVIEGGTSGAAALESARQARAAAEARKAEIRKRAFVPVTTPSDRPKPCSEWAVSSQ*
Ga0068859_1024201221	3300005617	Switchgrass Rhizosphere	TEIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMEHAATMGVINGTSQSAVLESARQARATAESRKAEIHKRTFVPSPTSSDQPRPCSEWK*
Ga0068859_1026321891	3300005617	Switchgrass Rhizosphere	WLKSEVEHAEHDARIMITENINRVDQQPTEIPQAQVPTGPTNSAGVMYWRQQLLLIQRAQREFVNKSDEERMQHAAKMGVIQGGTSASAALESARIARMAAESRKAEIRKRAFVPVRSASDQRKPCSELN*
Ga0068864_1005503251	3300005618	Switchgrass Rhizosphere	NRVDQHPTEIPQAQMPTRATTSTGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVTGSSQSAVLESARQARATAESRQTEIRKRAFVPLQTSSDLPKPCSAWPMNSR*
Ga0068864_1012308231	3300005618	Switchgrass Rhizosphere	EHAEHDARMMITDNINRVDQQSTEIPQAQLPTRQTRSAGVLYWRQQLLLIQRAQRQFVTKSDEERMVHAATMGVINGSSSSAVLESARQARATAESRKTEIRKRAFVPVTTASGQPKPCSEWAP*
Ga0068864_1019666802	3300005618	Switchgrass Rhizosphere	MITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARVSAESRKAEIRKRAFVPVTTSSDQPKPCSEWR*
Ga0068864_1022813671	3300005618	Switchgrass Rhizosphere	VWLKSEVEHAEHDGRTMITDNINRVDQQQTEIPQAQLPTRRTTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVSGASNSAMLESAVTARATAESRKAEIRKRAFVPVKTSSDQPKPCSEWAADLR*
Ga0068861_1000675911	3300005719	Switchgrass Rhizosphere	VWLKSEVEHAEHDARMMITDNINRVEQQSTEIPQAELPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTTSAVAKPCSEWR*
Ga0068863_1003489651	3300005841	Switchgrass Rhizosphere	QAQLPTRPTTSAGVLYWRQQLLLIQRAQREFVAKSDKERMVHAATMGIIAGGSQSAVLESARQAQATAESRRAEIRKRAFVPVTSSSDRPRPCSQWIVDR*
Ga0068863_1013612561	3300005841	Switchgrass Rhizosphere	KATSAFAAMMITEADFRELIWLKSEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTRSAGVLYWRSQLLLIQRAQREFVRKSDEERMVHAATMGVVSGASQSAVLESARRARATAESRKAEINKRAFVPVKPSSDQPKPCPQWTALR*
Ga0068858_1001584841	3300005842	Switchgrass Rhizosphere	QADFRELIWLKSEVEFAEHDARMMITDNINRVDQHPTEIPQAQLPVRPTTSAGVLYWRQQLLLMQRAQREFVKKSDEERMVHAATMGVINGASSSAVLESARRASATAESRKAEIRKRTFVPSNSNQIRGCTEWAAGGR*
Ga0068858_1001800251	3300005842	Switchgrass Rhizosphere	LVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAELPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTTSAVAKPCSEWR*
Ga0068860_1019260432	3300005843	Switchgrass Rhizosphere	WLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGSSSSAALESARLARATAESRKAEIRRRAFVPVTSSSDRLRPCSELAAGPR*
Ga0097621_1015896261	3300006237	Miscanthus Rhizosphere	AEHDARMMITENINRVDQQPTDIPQAQVPIHPTNSAGVSYWREQLLLIQRAQREFVQKSDLERMAHAAKMGMIAGRTSTSAALESARLAQAAAESRRTEIRKRAFVSAPPSSDRPKPCVEWK*
Ga0079222_114691211	3300006755	Agricultural Soil	DFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTKSAGVLYWRQHLMLIQRVQRQFVKKSDEERMAHTATMGVINGLSPSAVLESARQARASAESRKAEIRKRAFVPVTSSSDMPKPCSEWR*
Ga0079220_105991752	3300006806	Agricultural Soil	NRLDQQFTEIPQAQLPTRPTHSAGVLYWREQLLMIQKVQRQFVMKSDQERIKHAATMGVIGGISQSAVLESAGQARAAAESRKAEILKRAFVPVTTSSERPRPCSEWR*
Ga0075433_100395071	3300006852	Populus Rhizosphere	VWLKSEVEHAEHDARMMITENINRADQHATEIPQAQLPSRSTTSAGVLYWRLQLLLIQKAQREYVRKSDDERMVHAATMGVISGASQSAVLESARQAQARAESRKADIRNRAFVPMATSSNQPKPCSQWAVSPR*
Ga0075420_1011384362	3300006853	Populus Rhizosphere	TTEIPQAQLPTRQTNSAGVLYWRQQLLLMQRAQREFVKKSDEERMKHAATMGVIGGGTSQSAMLESARNARAAAESRKVEIRKRAFIPVKTSSDQPKPCSEWT*
Ga0075434_1025496641	3300006871	Populus Rhizosphere	MMITENINRVDQQATEIPQAQLPTRPTASAGVLYWRQQLLLIQRAQREFVKKSDEERMRHAATMGVIGGGSSQSAVLESARKARAAAESRKAEIRKRAFAPVTTSSDRPKPCSDWS*
Ga0068865_1014215221	3300006881	Miscanthus Rhizosphere	EHAEHDARMMITDNINRVDQQSTEIPQAELPTRSTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTSSAPAKPCSEWR*
Ga0075424_1019825321	3300006904	Populus Rhizosphere	NRADQHATEIPQAQLPSRSTTSAGVLYWRLQLLLIQKAQREFVKKSDEERMVHAATMGVISGASQSAVLESARQAQARAESRKADIRNRAFVPMATSSNQPKPCSQWAVSPR*
Ga0075424_1022981201	3300006904	Populus Rhizosphere	WLKSEVEHAEHDARMMITDNVNRVDQQETEIPQAQLPTRPTTSAGVLYWREQLLLMQRAQKEFVRKSDQERMAHAATMGVIAGTSSSAALESARNAHAAAESRKTEIRKRAFVSVTTSSDQPKPCSEWTVEQR*
Ga0079219_102334872	3300006954	Agricultural Soil	EMKISEGDFRELFWLKSEVEHADHDARMMITANINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLMIQRVQTEFVQKSDEQRMKHAATMAVIGGTSQSAVLQSARQAQAAAESRKADIRRRAFVPAPTSSDQLKPCSVWNKGGD*
Ga0075435_1006855101	3300007076	Populus Rhizosphere	MWLKSEVEHAEHDARMMITDNINRVDQHPTEIPQAQMPTRATTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVITGSNQSAVLQSARQAAATAESRRTEIRKRAFVPLQTSSDLPKPCSAWATSSR*
Ga0105245_127912761	3300009098	Miscanthus Rhizosphere	QHPTEIPQAQMPTRATTSAGVRYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVISGSSQSAVLESARQAQVTAESRRTEIRKRAFVPLQTSSDLPKPCSAWAMSSR*
Ga0105245_128741971	3300009098	Miscanthus Rhizosphere	DNINRADQQPTEIPQAEMPTRATTSAGVLSWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVSGSSSSAVLESARHAWATAESRKAEIRKRAFVPLKTSSDLPKPCSEWAGSR*
Ga0075418_126966491	3300009100	Populus Rhizosphere	DARMMITDNINRVDQQPTEIPQAQLPTRPTTSAGVLYWRQQLLLMQRAQREFVKKSDEERMAHAATMGVVGGRASQSAVLESARQARATAEARKAEIRKRAFVPVTTSSDQPKPCSEWTVSSVNRPG*
Ga0105247_115149991	3300009101	Switchgrass Rhizosphere	AGMKITESDFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARVSAESRKAEIRKRAFVPVTTSSDQPKPCSEWR*
Ga0105243_108024701	3300009148	Miscanthus Rhizosphere	AAMKITEADFRELVWLKSEVEHAEHDARMMITDNINRVDQQATEIPQAQMPTRPTTSAGVWYWRQQLLLIQRAQREFVKKSDDERMAHAATMGVVGSRASQSAVLESARQAKATAEARKAEIRKRAFVPVTTSSDQPKPCSEWTVSSVNRPG*
Ga0105243_114607911	3300009148	Miscanthus Rhizosphere	EVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKSSDEERMVHAATMGVINGVSQSAVLESARLARASAESRKAEIRKRAFVPVTTSSDQPKPCSEWR*
Ga0105243_129063661	3300009148	Miscanthus Rhizosphere	GDFRELFWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGSSSSAALESARLARATAESRKAEIRRRAFVAVTSSSDRPRPCSELAAGPR*
Ga0105241_121350212	3300009174	Corn Rhizosphere	WLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMRVINGASQSAVLESARQARETAESRKAEIRKRAFVPVTPSSDQPKPCSEWR*
Ga0105248_115015802	3300009177	Switchgrass Rhizosphere	MKITESDFRELVWLKSEVEHAEHDARMMITDNINRVDQQDTEIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQRQFVTKSDEERMVHAATMGVINGASSSAALESARLARAAAESRKAEIRKRAFVPVTTSSNAPKPCSEWR*
Ga0105238_113710311	3300009551	Corn Rhizosphere	KSEVEHAEHDARMMITDNINRVDQQSTEIPQSQLPTRPTHSAAVLYWRQQLLLMQRAQREFVKKSDEERMAHAATMGVIGGPSQSAVLESARQARTTAESRKAEIRKRAFVPVTTSSDGPKPCSEWR*
Ga0134128_100441013	3300010373	Terrestrial Soil	EGDFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTQSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASASAVLESARQARASAESRKAEIRKRAFVPVRTSSDQPKPCSEWR*
Ga0134124_107943781	3300010397	Terrestrial Soil	SEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSLGVLYWRQQLLLIQRAQREFVRKSDEERMVHAATMGVIAGSSQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDLPKPCSEWR*
Ga0134124_108573501	3300010397	Terrestrial Soil	RVDQQSTEIPQAQLPTRPTHSAAVLYWRQQLLLMQRAQREFVKKSDEERMAHAATMGVIGGPSQSAVLESARQARTTAESRKAEIRKRAFVPVTTSSDGPKPCSEWR*
Ga0134124_110209942	3300010397	Terrestrial Soil	WLKSEVEHAEHDARMMITDNINRADQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASASAVLESARQARATAESRKAEIRKRAFVLVTTSSDQPKPCSEWR*
Ga0134124_110393342	3300010397	Terrestrial Soil	HDARMMITDNINRVDQQSTDIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVTKSDEERMAHAATMGVIAGSSQSAVLESARQARATAESRKADIRRRAFVPVTTSSSQPKPCSEWR*
Ga0134124_113073261	3300010397	Terrestrial Soil	KAAQAISGMKITEADFRELMWLKSEVEHAEHDARMMITDNINRVDQHPTEIPQAQMPTRATTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVISGSSQSAVLESARQAQATAESRRTEIRKRAFVPLQTSSDLPKPCSAWATSSR*
Ga0134124_117208851	3300010397	Terrestrial Soil	RVDQQSTEIPQAQVPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASQSAVLESARQARAAAESRKAEIRKRAFVSVTTSSDQPKPCSEWR*
Ga0134124_117252562	3300010397	Terrestrial Soil	ALAGMKITEADFRELVWLKSQVEHAEHDARMMITDNINRVDQQPTEIPQVQLPTRSTTSAGVLYWRQQLLLMQRAQREYVKKSDEERMVHAATMGVVSGVSQSAVLESARQARATAESRKAEIRTRAFVPMTTSSSGIKPCSEWTVATR*
Ga0134124_127851462	3300010397	Terrestrial Soil	AEHDARMMITDNINCVDQQSTEIPQAQMPARPTHSAGVLYWRQQLLLIQRAQKEFVTKSDHERMVHAATMGVVAGASQSAVLESARQARATAESRTTEIRKRAFIPVNTSSDRPKPCSEWTVDQR*
Ga0134124_128445041	3300010397	Terrestrial Soil	SEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARRARATAESRKAEIRKRAFIPVASSSDRQRPCSELAAGPR*
Ga0134127_114607612	3300010399	Terrestrial Soil	EADFRELVWLKSEVGHAEHDARMMITDNINRVDQQATEIPQAQLPTRPTASAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVIAGGASQSSVLESARNARAAAESRRVEIRNRAFVPVTTSSDRPKQCSEWAAGLR*
Ga0134127_117741363	3300010399	Terrestrial Soil	ARMMITDNINRVDQQSTEIPQAQLPTRATNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVIAGASQSAVLESARQARATAESRKAEIRKRAFVPVTTPSDRPKPCSEWAANQQE*
Ga0134127_131028801	3300010399	Terrestrial Soil	AGMKITEADFRELVWLKSEVEHAEHDARMMITDNINRVDQQATEIPQAQMPTRPTTSAGVLYWRQQLLLIQRAQREFVKKSDEERMAHAATMGVVGSRASQSAVLESARQAKATAEARKAEIRKRAFVPVTTSSDRPKPCSEWTVASP*
Ga0134122_112242021	3300010400	Terrestrial Soil	AEHDARIMITDNINRVDQQSTEIPQSQLPTRPTHSAAVLYWRQQLLLMQRAQREFVKKSDEERMAHAATMGVIGGPSQSAVLESARQARTTAESRKAEIRKRAFVPVTTSSDGPKPCSEWR*
Ga0134121_106149573	3300010401	Terrestrial Soil	MTISEGDFRELFWLKSEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVTKSDEERMVHAATMGVINGASSSAALESARQARATAESRRAEIRKRAFVPVTSSSDLQRPCSELAAGPR*
Ga0134123_105842631	3300010403	Terrestrial Soil	AEHDARMMITDNINRLDQQPTEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQKEFVTKSDHERMVHAATMGVVAGASQSAVLESARQARATAESRTTEIRKRAFIPVNTSSDRPKPCSEWNELSGRMSRLYD*
Ga0134123_110437701	3300010403	Terrestrial Soil	IITDNVNRVDQHATEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVISGASQSAVLESARQAGATAESRKAEIRKRAFVPVATSSDRPKPCSEWTVDRR*
Ga0150985_1205010351	3300012212	Avena Fatua Rhizosphere	FRELFWLKSEVQYAEHDARMMITENMNRVDQQGTEIPQAQLPTRATNSAGVLYWRHQLLLIQKAQIEYVNQSDQQRMVHAATMGVISGSSSSAALQSARLARMRAESRQAEIRKRAFVPARTSSDQPKSCSELAAG*
Ga0164298_112179161	3300012955	Soil	QAVAGMMITEADFLELFWLKSEVEYAEHDARMMITDNINRVDQHETEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVNKSDQERMVHAATMGVIAGGSQSAVLEAARKARATSESRKLEIRKRAFVPQTTSSDRPKSCSEWATALR*
Ga0164299_108852091	3300012958	Soil	MITDNMNRVDQHETEIPQTQLPTRPTSSMGVLYWRQQLLLIQRAQREFVNNSDHERMVHAATMGVASGVSSSAVLEWARRAQATAESRRAEIRKRAFVAVATSSNQPKPCSEWSTR*
Ga0164299_115733071	3300012958	Soil	MKITEADFRELVWLKSEVEHAEHDAHMMITDNINRVDQQSTEIPQAQLPMRPTESAGVMYWRQQLLLIQKAQREFVNKSDQERMVHAATMGVIAGGSQSAVLESARKARATAESRKLEIRKRAFVPQTTSSDRPKSCSEWATALR*
Ga0157373_107344101	3300013100	Corn Rhizosphere	RELFWLKSEVEYANHDARMMITANINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLMIQRVQREFVQKSDEERMKHAATMAVIGGISPSAVLESARQAQAAAESRKAEIRKRAFVPAPTSSEQPKPCSAWM*
Ga0163162_102887062	3300013306	Switchgrass Rhizosphere	WLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQIQFVKKSDEERMVHAATMGVINGASQSAVLESARQARASAESRKAEIRKRAFVTVTTSSAQPKPCSEWR*
Ga0163163_100621833	3300014325	Switchgrass Rhizosphere	RVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARRARATAESRKAEIRKRAFIPVASSSDRQRPCSELAAGPR*
Ga0157379_117928141	3300014968	Switchgrass Rhizosphere	MITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTTSAVAKPCSEWR*
Ga0157376_130513791	3300014969	Miscanthus Rhizosphere	IPQAQLPTRPTTSAAVLYWRQQLLLMQRAQREYVQKSDTERMAHAARMGIIGGRASASAVLESARRAQTAAESRKAEIRKQAFVPVTPSSDRPKSCSEWK*
Ga0132256_1031342012	3300015372	Arabidopsis Rhizosphere	ARMMITDNINRVDQHPTEIPQAQMPTRATTSAGVRYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVITGSSQSAVLESARQARATAESRQTEIRKRAFVPLPTSSDLPKPCSAWAASSR*
Ga0132256_1032865401	3300015372	Arabidopsis Rhizosphere	INRVDQQPTEIPQAQLPTRPTSSAGVLYWRSQLLLIQRAQREFVRKSDEERMVHAATMGVVSGASQSAVLESARRARATTESRKAEINKRAFVPVKTSSDQPKPCTQWAALR*
Ga0132255_1047309872	3300015374	Arabidopsis Rhizosphere	VEFAGHDAKLMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARASAESRKAEIRKRAFVPVITSSDQPKPCSEWR*
Ga0132255_1054207651	3300015374	Arabidopsis Rhizosphere	SEVEYAEHDARTMITDNINRVDQHETEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVNKSDQERMVHAASMGIISGSSQSAVLESARLARATAESRRAEIRKRAFVPPTTSSDRSKPCSAWSARLG*
Ga0182009_100339962	3300021445	Soil	ITENINRVDQHPTEIPQAQLPTRTTHSAGVLYWRQQLLLIQRAQREFVNKSDEERMAHAATMGVIAGASQSAMLESARQAQAMAESRKMEIRKRAFVPAPTSSDQPKPCSDWR
Ga0182009_100467171	3300021445	Soil	RTMIPANINRLDQQLTEIPQAELPTRPTHSAGVLYWRQQLLLIQRVQREFVQKSDLERMKHAATMAVLGGTSQSAVLESARQARAAAESRKAEIRKRAFVPVPTSSDQPKPCSEWR
Ga0182009_106872221	3300021445	Soil	ARMMITDNINRLDQQWTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRVQREFVAKSDEQRIKHAATMGVIGGTSQSAVLESARRAQANAESRKAEIRKRAFVPVITSSDLPKPCSEWR
Ga0182009_107282612	3300021445	Soil	VDQQSTDIPQAQLPTRPTHSAGVLYWREQLLLIQRAQRDFVRKSDEERMAHAATMGVISGASQSAVLESARQARATAESRRAEIRKRAFVPITTTSDRPRPCSEWR
Ga0207697_104824341	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVRKSDEERMVHAATMGVIAGSSQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDQPKPCSEWR
Ga0207710_104285571	3300025900	Switchgrass Rhizosphere	LVWLKLEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARVSAESRKAEIRKRAFVPVTTSSDQPKPCSEWR
Ga0207643_100926782	3300025908	Miscanthus Rhizosphere	MQITESDFRELVWLKSEVEHAEHDARMMITDNINRVDQQMTEIPQAQLPTRPTRSLGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVISGTSQAAALESARQARVIAESRKAEIRKRAFVAPTTSTDRPKPCSELAQ
Ga0207671_113044431	3300025914	Corn Rhizosphere	ISEGDFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQMPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAVTMGVISGASQSAVLESARQARAIAESRKAEIRKRAFVPVTTASDQPKPCSEWR
Ga0207662_102763832	3300025918	Switchgrass Rhizosphere	EHDARMMITENMNRVDQHDTEIPQAQLPTRPTTSAGVRYWRQQLLLIQRAQREFVKKSDQERMIHAASMTVISGGSQSAVFESARLAQAAAESRKAEIRKRAFVPVASSDRLKPCSAWSASLR
Ga0207662_111364092	3300025918	Switchgrass Rhizosphere	STEIPQAQVPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVISGASQSAVLESARLARASAESRKAEIRKRAFVPVTTSSAPAKPCSEWR
Ga0207709_108645341	3300025935	Miscanthus Rhizosphere	GDFRELFWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPPRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGSSSSAALESARLARATAESRKAEIRRRAFVAVTSSSDRPRPCSELAAGPR
Ga0207709_117859351	3300025935	Miscanthus Rhizosphere	KATQVLAGMKITEGDLRELIWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQRQFVKSSDEERMVHAATMGVINGVSQSAVLESARLARASAESRKAEIRKRAFVPVTTSSDQPKPCSEWR
Ga0207704_117329701	3300025938	Miscanthus Rhizosphere	LKSEVEHAEHDARMMITDNINRVDQQSTEIPQAELPTRSTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTSSAPAKPCSEWR
Ga0207711_102054601	3300025941	Switchgrass Rhizosphere	SEVEHAEHDARMMITDNINRVDQQSTEIPQAQVPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVISGASQSAVLESARLARATAESRKAEIRKRAFVSVTTSSDQPKPCSEWR
Ga0207689_114042881	3300025942	Miscanthus Rhizosphere	DQQSTEIPQVQLPTRPTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASASAVLESARQARATAESRKAEIRKRAFVLVTTSSDQPKPCSEWR
Ga0207679_116880671	3300025945	Corn Rhizosphere	ELFWLNSEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARRARATAESRKAEIRKRAFIPVASSSDRQRPCSELAAGPR
Ga0207651_121207111	3300025960	Switchgrass Rhizosphere	AEHDARMMITDNINRVDQQATEIPQAQLPTRPTTSAGVLYWRQQLLLIQRAQREFVTKSDKERMVHAATMGVMAGASQSAVLESARQAQATAESRRAEIRKRAFVPVTSPTDRAKPCSEWAMGR
Ga0207703_101702842	3300026035	Switchgrass Rhizosphere	LAGMKISEGDFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVKKSDEERMAHAATMGVIAGGSQSAVLESARQARATAESRKAEIRKRAFVPVITSSDRPKPCSEWR
Ga0207703_115711681	3300026035	Switchgrass Rhizosphere	QADFRELIWLKSEVEFAEHDARMMITDNINRVDQHPTEIPQAQLPVRPTTSAGVLYWRQQLLLMQRAQREFVKKSDEERMVHAATMGVINGASSSAVLESARRASATAESRKAEIRKRTFVPSNSNQIRGCTEWAAGGR
Ga0207708_100977541	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	EIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQRQFVTKSDEERMVHAATMGVINGASSSAALESARLARAAAESRKAEIRKRAFVPVTTSSNAPKPCSEWR
Ga0207648_111305102	3300026089	Miscanthus Rhizosphere	EIPQAELPTRPTHSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARLARASAESRKAEIRKRAFVPVTTTSAVAKPCSEWR
Ga0207676_104376162	3300026095	Switchgrass Rhizosphere	GMKIAEADFRELVWLKSEVQHAEHDARIMITENINRVDQQPTEIPQAQVPTGPTNSAGVMYWRQQLLLIQRAQREFVNKSDEERMQHAAKMGVIQGGTSASAALESARIARMAAESRKAEIRKRAFVPVRSASDQRKPCSELN
Ga0207676_115027741	3300026095	Switchgrass Rhizosphere	EADFRELVWLKSEVEHAEHDGRTMITDNINRVDQQQTEIPQAQLPTRRTTSAGVLYWRQQLLLIQRAQREYVKKSDEERMVHAATMGVVSGASNSAMLESAVTARATAESRKAEIRKRAFVPVKTSSDQPKPCSEWAADLR
Ga0207676_124891811	3300026095	Switchgrass Rhizosphere	QAQLPTRPTNSAGVLYWRQQLLLIQRAQRDFVKKSDEERMVHAATMGVVSGTSQSAVLESARQAQAMAESRKAEIRKRAFVPVTTLSDRLKPCPSGP
Ga0207675_1005625651	3300026118	Switchgrass Rhizosphere	VEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQREFVKKSDEERMAHAATMGVIAGGSQSAVLESARQARATAESRKAEIRKRAFVPVITSSDRPKPCSEWR
Ga0207675_1027052221	3300026118	Switchgrass Rhizosphere	DKQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVIAGSSQSAVLESARQARATAESRKAEIRKRAFVPVTTSSDLPKPCSEWR
Ga0209073_104405361	3300027765	Agricultural Soil	AEMKISEGDFRELFWLKSEVEHADHDARMMITANINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLMIQRVQTEFVQKSDEQRMKHAATMAVIGGTSQSAVLQSARQAQAAAESRKADIRRRAFVPAPTSSDQLKPCSVWNKGGD
Ga0209177_101370551	3300027775	Agricultural Soil	EMKISEGDFRELFWLKSEVEHADHDARMMITANINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLMIQRVQTEFVQKSDEQRMKHAATMAVIGGTSQSAVLQSARQAQAAAESRKADIRRRAFVPAPTSSDQLKPCSVWNKGGD
Ga0207428_100119677	3300027907	Populus Rhizosphere	VEHAEHDARMMITDNINRVDQQSTDIPQAQLPTRPTRSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARQARATAESRRAEIRRRAFVPLTPSSDRPKPCSEWR
Ga0268265_107377581	3300028380	Switchgrass Rhizosphere	SEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTNSAGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVISGASPSAVLESARQARVTAESRKAEIRKRAFVPVTIPSDRPRPCSELAQR
Ga0268265_116186541	3300028380	Switchgrass Rhizosphere	NRVDQQSTEIPQAQLPTRPTHSPGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARASAESRKAEIRKRAFVPVTTSSAQPKPCSEWR
Ga0310813_110653891	3300031716	Soil	EGDFRELIWLKLEVEHAEHDARMMITDNINRVDQQSTDIPQAQLPTRPTHSVGVLYWRQQLLLIQRAQRQFVQKSDEERMEHAATMGVISGSSQAAVLESARQARATAESRRAEIRKRAFVPVTTASDQPRPCTEWR
Ga0310813_119687241	3300031716	Soil	DSEIRPVQAAQALAAIRITEADFRELVWLKSEVEHAEHDAKSMITENINRVDQQATEIPQAQVPARPTPSAAVLYWRQQLRLIQKAQRDFVRKSDEERMAHAAASRVIAGGASQAAIVESTRNARVAAESRKTEIRKRALVALQGSSDVPKACSDWK
Ga0310813_122297172	3300031716	Soil	TEADFRELVWLKSEVEHAEHDARMMITDNINRVDQQSTEIPQAQLPTRPTHSPGVLYWRQQLLLIQRAQRQFVKKSDEERMVHAATMGVINGASQSAVLESARQARASAESRKAEIRKRAFVPVTTSSDQPKPCSEWR
Ga0310813_122534911	3300031716	Soil	RELFWLKSEVEHAEHDARMMITDNINRVDQQPTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASSSAALESARRARATAESRKAETRKRAFIPVASSSDRQRPCSELAAGPR
Ga0308176_122205051	3300031996	Soil	GAAQAIARMQITEADFRELFWLKSEVQHAEHDARMMITENITRVDQQPTEIPQAQIPSRPTNSAGVLYWREQLRLIQGAQREFVQKSDLERIAHAAKMGMIAGRTSTSAVLESARLAQAAAESRRTDIRKRAFTPIAPSSDRPKPCVEWK
Ga0310903_107535732	3300032000	Soil	NINRVDQQSTEIPQAQLPTRPTHSAGVLYWRQQLLLIQRAQREFVKKSDEERMVHAATMGVINGASQSVVLESARLARASAESRKAEIRKRAFVPVTTSSAPAKPCSEWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064824

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences