Metagenome / Metatranscriptome Family F064822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064822
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	67 residues
Representative Sequence	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV
Number of Associated Samples	93
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.09 %
% of genes near scaffold ends (potentially truncated)	28.91 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.531 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.156 % of family members)
Environment Ontology (ENVO)	Unclassified (39.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.87% β-sheet: 50.79% Coil/Unstructured: 33.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00106	adh_short	10.16
PF13400	Tad	9.38
PF03462	PCRF	7.81
PF07681	DoxX	3.12
PF08305	NPCBM	2.34
PF07811	TadE	1.56
PF00465	Fe-ADH	1.56
PF04185	Phosphoesterase	1.56
PF00482	T2SSF	1.56
PF13561	adh_short_C2	1.56
PF02738	MoCoBD_1	0.78
PF04909	Amidohydro_2	0.78
PF14023	DUF4239	0.78
PF04828	GFA	0.78
PF10604	Polyketide_cyc2	0.78
PF08534	Redoxin	0.78
PF05901	Excalibur	0.78
PF00877	NLPC_P60	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	7.81
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	7.81
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	3.12
COG4270	Uncharacterized membrane protein	Function unknown [S]	3.12
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	1.56
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	1.56
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	1.56
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	1.56
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.84 %
Unclassified	root	N/A	5.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.84 %
Unclassified	root	N/A	5.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	89.06 %
Unclassified	root	N/A	5.47 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	75.00 %
Unclassified	root	N/A	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.91 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.34 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	75.00 %
Unclassified	root	N/A	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.91 %
Demequinaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae	2.34 %
Psychrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	72.66 %
Unclassified	root	N/A	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.91 %
Demequina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina	2.34 %
unclassified Psychrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	50.00 %
Unclassified	root	N/A	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.91 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	2.34 %
Demequina salsinemoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina → Demequina salsinemoris	2.34 %
Psychrobacter sp. PRwf-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PRwf-1	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	50.00 %
Unclassified	root	N/A	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.91 %
Demequina salsinemoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina → Demequina salsinemoris	2.34 %
Nocardioides sp. zg-1230	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. zg-1230	0.78 %
Nocardioides sp. JS614	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	0.78 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.78 %
Psychrobacter sp. PRwf-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PRwf-1	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02JKCO9	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	570	Open in IMG/M
2170459017\|G14TP7Y02FJMSE	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	686	Open in IMG/M
2170459020\|G1P06HT01A8I37	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	549	Open in IMG/M
3300000956\|JGI10216J12902_107703604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1254	Open in IMG/M
3300001686\|C688J18823_10963228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	541	Open in IMG/M
3300002568\|C688J35102_118003421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	522	Open in IMG/M
3300002568\|C688J35102_119368876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PRwf-1	682	Open in IMG/M
3300002568\|C688J35102_120066083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	866	Open in IMG/M
3300002568\|C688J35102_120352882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1009	Open in IMG/M
3300002568\|C688J35102_120528857	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300002568\|C688J35102_120978011	All Organisms → cellular organisms → Bacteria	4425	Open in IMG/M
3300003321\|soilH1_10153851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	2057	Open in IMG/M
3300003323\|rootH1_10356365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1348	Open in IMG/M
3300004081\|Ga0063454_100085130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1440	Open in IMG/M
3300004153\|Ga0063455_100943859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	617	Open in IMG/M
3300004156\|Ga0062589_102816054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	507	Open in IMG/M
3300004479\|Ga0062595_100124270	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300004479\|Ga0062595_100603188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	856	Open in IMG/M
3300004643\|Ga0062591_100958094	Not Available	809	Open in IMG/M
3300005093\|Ga0062594_100568524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300005093\|Ga0062594_102559577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	562	Open in IMG/M
3300005163\|Ga0066823_10009541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1350	Open in IMG/M
3300005329\|Ga0070683_100108179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2622	Open in IMG/M
3300005329\|Ga0070683_101916116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	570	Open in IMG/M
3300005329\|Ga0070683_102008593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	556	Open in IMG/M
3300005343\|Ga0070687_100603492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	754	Open in IMG/M
3300005367\|Ga0070667_100945163	Not Available	803	Open in IMG/M
3300005438\|Ga0070701_10369585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	901	Open in IMG/M
3300005439\|Ga0070711_101700354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	553	Open in IMG/M
3300005466\|Ga0070685_10289269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1100	Open in IMG/M
3300005526\|Ga0073909_10622516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	535	Open in IMG/M
3300005530\|Ga0070679_100002938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	15518	Open in IMG/M
3300005530\|Ga0070679_102088693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	516	Open in IMG/M
3300005535\|Ga0070684_101407904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	657	Open in IMG/M
3300005548\|Ga0070665_100004500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	14627	Open in IMG/M
3300005614\|Ga0068856_101648366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	654	Open in IMG/M
3300005614\|Ga0068856_101736825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300005616\|Ga0068852_102661458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	520	Open in IMG/M
3300005618\|Ga0068864_100269440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1586	Open in IMG/M
3300005713\|Ga0066905_101868404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	555	Open in IMG/M
3300005718\|Ga0068866_10336410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	955	Open in IMG/M
3300005840\|Ga0068870_10234506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1130	Open in IMG/M
3300005843\|Ga0068860_102480170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	538	Open in IMG/M
3300005937\|Ga0081455_10225644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1386	Open in IMG/M
3300006237\|Ga0097621_101982316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	556	Open in IMG/M
3300006358\|Ga0068871_101612937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	614	Open in IMG/M
3300006358\|Ga0068871_101799048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	582	Open in IMG/M
3300006581\|Ga0074048_13343281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300006581\|Ga0074048_13353359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	660	Open in IMG/M
3300006804\|Ga0079221_10724598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	697	Open in IMG/M
3300006806\|Ga0079220_10600801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	782	Open in IMG/M
3300006953\|Ga0074063_14252400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1186	Open in IMG/M
3300009098\|Ga0105245_12002549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	633	Open in IMG/M
3300009098\|Ga0105245_12150092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	612	Open in IMG/M
3300009098\|Ga0105245_13248052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	504	Open in IMG/M
3300009840\|Ga0126313_10199895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1533	Open in IMG/M
3300009840\|Ga0126313_11562211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	549	Open in IMG/M
3300009870\|Ga0131092_10040841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	6492	Open in IMG/M
3300010040\|Ga0126308_10826845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	642	Open in IMG/M
3300010041\|Ga0126312_10777910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	693	Open in IMG/M
3300010044\|Ga0126310_10000278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	16237	Open in IMG/M
3300010044\|Ga0126310_10450721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	929	Open in IMG/M
3300010044\|Ga0126310_10557107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300010371\|Ga0134125_12941344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	517	Open in IMG/M
3300010375\|Ga0105239_11868944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	696	Open in IMG/M
3300012212\|Ga0150985_119592176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300012943\|Ga0164241_10833619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300012948\|Ga0126375_11463991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	582	Open in IMG/M
3300012984\|Ga0164309_11055958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	673	Open in IMG/M
3300013105\|Ga0157369_11831031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	616	Open in IMG/M
3300013297\|Ga0157378_11623472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	693	Open in IMG/M
3300013306\|Ga0163162_13422175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	506	Open in IMG/M
3300013307\|Ga0157372_10416707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1565	Open in IMG/M
3300013307\|Ga0157372_11166597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300013307\|Ga0157372_12587048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	582	Open in IMG/M
3300013308\|Ga0157375_10248338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1940	Open in IMG/M
3300013308\|Ga0157375_10628237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1232	Open in IMG/M
3300013308\|Ga0157375_11342181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300013308\|Ga0157375_13363648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	533	Open in IMG/M
3300014325\|Ga0163163_12732446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	550	Open in IMG/M
3300014497\|Ga0182008_10483059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	678	Open in IMG/M
3300015371\|Ga0132258_10126912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	6074	Open in IMG/M
3300015373\|Ga0132257_103170209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	599	Open in IMG/M
3300017792\|Ga0163161_10415125	Not Available	1082	Open in IMG/M
3300017792\|Ga0163161_10533782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	959	Open in IMG/M
3300017792\|Ga0163161_11908265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	529	Open in IMG/M
3300019767\|Ga0190267_11599915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	509	Open in IMG/M
3300020081\|Ga0206354_11148470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	570	Open in IMG/M
3300020082\|Ga0206353_10885027	All Organisms → cellular organisms → Bacteria	2980	Open in IMG/M
3300025908\|Ga0207643_11116135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	509	Open in IMG/M
3300025912\|Ga0207707_10030786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	4695	Open in IMG/M
3300025918\|Ga0207662_10478885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	855	Open in IMG/M
3300025927\|Ga0207687_10984448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	723	Open in IMG/M
3300025934\|Ga0207686_10622415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300025938\|Ga0207704_11989461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	500	Open in IMG/M
3300025940\|Ga0207691_11611349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	528	Open in IMG/M
3300025942\|Ga0207689_10916137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	740	Open in IMG/M
3300025944\|Ga0207661_10031437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4101	Open in IMG/M
3300025944\|Ga0207661_10605823	Not Available	1005	Open in IMG/M
3300025986\|Ga0207658_10284160	Not Available	1420	Open in IMG/M
3300026041\|Ga0207639_10886388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	834	Open in IMG/M
3300026078\|Ga0207702_11238284	Not Available	740	Open in IMG/M
3300026095\|Ga0207676_10275627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1525	Open in IMG/M
3300027560\|Ga0207981_1019775	Not Available	1213	Open in IMG/M
3300027821\|Ga0209811_10082939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1134	Open in IMG/M
3300028379\|Ga0268266_10143073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2147	Open in IMG/M
3300028381\|Ga0268264_11156282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	783	Open in IMG/M
3300028679\|Ga0302169_10029751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina → Demequina salsinemoris	1259	Open in IMG/M
3300028732\|Ga0302264_1050134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina → Demequina salsinemoris	971	Open in IMG/M
3300028770\|Ga0302258_1046745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina → Demequina salsinemoris	1015	Open in IMG/M
3300028802\|Ga0307503_10124024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1137	Open in IMG/M
3300028803\|Ga0307281_10446129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	500	Open in IMG/M
3300028869\|Ga0302263_10164234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	885	Open in IMG/M
3300030050\|Ga0302255_1036155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. zg-1230	962	Open in IMG/M
3300031938\|Ga0308175_100003565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	10801	Open in IMG/M
3300031938\|Ga0308175_100003717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	10618	Open in IMG/M
3300031938\|Ga0308175_100070018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3120	Open in IMG/M
3300031938\|Ga0308175_100323985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1581	Open in IMG/M
3300031938\|Ga0308175_100874520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	987	Open in IMG/M
3300031938\|Ga0308175_101323268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	803	Open in IMG/M
3300031938\|Ga0308175_102219125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	615	Open in IMG/M
3300031938\|Ga0308175_103057244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300031939\|Ga0308174_10982071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	716	Open in IMG/M
3300031939\|Ga0308174_11383621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	602	Open in IMG/M
3300031996\|Ga0308176_10119978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2352	Open in IMG/M
3300031996\|Ga0308176_11479133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	723	Open in IMG/M
3300032074\|Ga0308173_10757144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	891	Open in IMG/M
3300034268\|Ga0372943_0137654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1473	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.16%
Host-Associated	Host-Associated	37.50%
Engineered	Engineered	2.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.16%
Plants	Host-Associated → Plants	37.50%
Solid Waste	Engineered → Solid Waste	1.56%
Wastewater	Engineered → Wastewater	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.41%
Peat	Environmental → Terrestrial → Peat	3.91%
Roots	Host-Associated → Plants → Roots	3.12%
Grass	Engineered → Solid Waste → Grass	1.56%
Rhizome	Host-Associated → Plants → Rhizome	0.78%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	18.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Composting	Engineered → Solid Waste → Grass → Composting	1.56%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.78%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.03%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.03%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.12%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_04411630	2170459005	Grass Soil	MGDENAGPGKHARVVQVCGDETYERIWDLVRLGAVVSVEFVPAGDRRMLATTTIMDEKGITVDTTVVEV
4ZMR_04417330	2170459017	Switchgrass, Maize And Mischanthus Litter	MGKHRRGVPVHGDETYERIWDLVGQGAVVSTEFVLCGDRQMLATTTIMDDHGITVDQTVVEV
2NP_03412340	2170459020	Switchgrass, Maize And Mischanthus Litter	TEAVLLEEILMAGKHVRVVQLNGDDTYERIWELVKLGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTVVEV
JGI10216J12902_1077036043	3300000956	Soil	MGEENARPGKHARVVQVCGDETYERIWELVRLGAVVSVEFVPAGDRRMCATTTIVDEKGVTVDTTVVEV*
C688J18823_109632282	3300001686	Soil	RRVGMAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
C688J35102_1180034211	3300002568	Soil	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADNRQMLATTTIVDDHGVTVDQTVVEV*
C688J35102_1193688761	3300002568	Soil	MAGKHRRIVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQAVVEV*
C688J35102_1200660831	3300002568	Soil	MAGKHRRVVSVHGDDTYERIYDLVRFGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
C688J35102_1203528822	3300002568	Soil	MAGKHVRVVQFTGDDAYEQIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
C688J35102_1205288572	3300002568	Soil	PTMGLLPLLSWRRTHPEEGRMAGKHRRIVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
C688J35102_1209780112	3300002568	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
soilH1_101538513	3300003321	Sugarcane Root And Bulk Soil	MAGKHRRAVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDH
rootH1_103563651	3300003323	Sugarcane Root And Bulk Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDCTVDE*
Ga0063454_1000851301	3300004081	Soil	MAGKHVRVVQLTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDEHGVTVDQTAVEI*
Ga0063455_1009438592	3300004153	Soil	GRTTRRRVGMAGKHRRVVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0062589_1028160542	3300004156	Soil	VPVHGDETYERIWDLVGEGAVVSTEFVMCGDRQMLATTTIMDDHGITVDQTVVQV*
Ga0062595_1001242702	3300004479	Soil	VVLPLSVTAQHLEKECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0062595_1006031882	3300004479	Soil	VVLPLSMTAQYLEEECQMAGKHVKVVRLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0062591_1009580942	3300004643	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTIVEV*
Ga0062594_1005685242	3300005093	Soil	MGLLPLLSWRHTHPEEGRMEGKHRRVVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0062594_1025595771	3300005093	Soil	MGSSPCSVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
Ga0066823_100095412	3300005163	Soil	MAGKHVRVVQFTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDTTAVEI*
Ga0070683_1001081793	3300005329	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDRTVVEV*
Ga0070683_1019161161	3300005329	Corn Rhizosphere	MAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI*
Ga0070683_1020085931	3300005329	Corn Rhizosphere	MGPSPCSVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
Ga0070687_1006034922	3300005343	Switchgrass Rhizosphere	VVLPLSMTAQYLEEECQMAGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0070667_1009451631	3300005367	Switchgrass Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDH
Ga0070701_103695852	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MEGKHRRVVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0070711_1017003541	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAGKHVRVVQLTGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDTTAVEI*
Ga0070685_102892692	3300005466	Switchgrass Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0073909_106225162	3300005526	Surface Soil	MAGKHVRVVHLNGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTVVEV*
Ga0070679_10000293811	3300005530	Corn Rhizosphere	MAGKHRRVVPVTGDETYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV*
Ga0070679_1020886932	3300005530	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTV
Ga0070684_1014079041	3300005535	Corn Rhizosphere	MAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
Ga0070665_1000045003	3300005548	Switchgrass Rhizosphere	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV*
Ga0068856_1016483662	3300005614	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTV
Ga0068856_1017368252	3300005614	Corn Rhizosphere	RTYDVVLPLSMTAQYLEEECQMTGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0068852_1026614582	3300005616	Corn Rhizosphere	MGSSPCSVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0068864_1002694401	3300005618	Switchgrass Rhizosphere	RVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0066905_1018684042	3300005713	Tropical Forest Soil	MGEEHRPGKHARVVQVCGDETYERIWELVRLGAVVSVEFVPAGDRRMCATTTIVDDKGVTVDTTVVEV*
Ga0068866_103364101	3300005718	Miscanthus Rhizosphere	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0068870_102345061	3300005840	Miscanthus Rhizosphere	MGSSPCSVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTV
Ga0068860_1024801701	3300005843	Switchgrass Rhizosphere	VGNHPEEGRMAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0081455_102256443	3300005937	Tabebuia Heterophylla Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVQFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0097621_1019823162	3300006237	Miscanthus Rhizosphere	PTMGSSPCSVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
Ga0068871_1016129371	3300006358	Miscanthus Rhizosphere	RRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0068871_1017990482	3300006358	Miscanthus Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTAVEM*
Ga0074048_133432812	3300006581	Soil	MAGKHVRVVQLTGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0074048_133533591	3300006581	Soil	MGSSPQLVTAQYLEEECRMAGKHVRVVQLAGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI*
Ga0079221_107245982	3300006804	Agricultural Soil	VVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0079220_106008012	3300006806	Agricultural Soil	MGEEHARPGKHARVVQVCGDETYERIWELVRLGAVVSVEFVPAGDRRMCATTTIVDDKGVTVDTTVVEV*
Ga0074063_142524002	3300006953	Soil	MPDQRVRVVHMRGDDAYERIWELVRLGAVVSVEFVRDGHQRMLATTTIVDDHGVTLDRTVVEV*
Ga0105245_120025491	3300009098	Miscanthus Rhizosphere	MTAQYLEEECQMAGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0105245_121500921	3300009098	Miscanthus Rhizosphere	IHPRRGTMAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADNRQMLATTTIVDDHGVTVDQTVVEV*
Ga0105245_132480521	3300009098	Miscanthus Rhizosphere	MTTQHLEEECRMAGKHVRVVQFTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI*
Ga0126313_101998953	3300009840	Serpentine Soil	VATQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDRTAVEI*
Ga0126313_115622111	3300009840	Serpentine Soil	MAGKHRRAVQVHGDDTYERIWDLVRLGAVVSVEFVLSGDRQMLATTTIVDDHGVTVDQT
Ga0131092_100408415	3300009870	Activated Sludge	MGEEHAKPGKHARVVQVCGDETYERIWELVRLGAVVSVEFVPAGDRRMCATTTIVDEKGVTVDTTVVEV*
Ga0126308_108268451	3300010040	Serpentine Soil	MAGKHRRAVQVHGDDTYERIWDLVRLGAVVSVEFVLSGDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0126312_107779102	3300010041	Serpentine Soil	MAGKHRRAVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDRTAVEI*
Ga0126310_1000027818	3300010044	Serpentine Soil	MAGKHRRVVQVHGDDTYERIWELVRLGAVVGVEFVFSDDRQMLATTTIVDDHGVTVDQTIVEV*
Ga0126310_104507211	3300010044	Serpentine Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDEHGVTVDQTVVEV*
Ga0126310_105571072	3300010044	Serpentine Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV*
Ga0134125_129413442	3300010371	Terrestrial Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLTDERQMLATTTIVDDHGVTVDQTVVEV*
Ga0105239_118689442	3300010375	Corn Rhizosphere	GTMAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0150985_1195921762	3300012212	Avena Fatua Rhizosphere	MAGKQVRVVQLTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDEHGVTVDQTAVEI*
Ga0164241_108336191	3300012943	Soil	IHPRRGVMAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTIVEV*
Ga0126375_114639911	3300012948	Tropical Forest Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSEDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0164309_110559582	3300012984	Soil	MTTQHLEEECRMAGKHVRVVQFTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGGTVDTTAVEI*
Ga0157369_118310313	3300013105	Corn Rhizosphere	MTTQHLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI*
Ga0157378_116234721	3300013297	Miscanthus Rhizosphere	MTAQYLEEECQMAGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTVVEV*
Ga0163162_134221752	3300013306	Switchgrass Rhizosphere	MGEEHAGPGKHARVVQVCGDDTYERIWELVRLGAVVSVEFVPAGDRRMLATTTIMDEKGITVDTTVVEV*
Ga0157372_104167072	3300013307	Corn Rhizosphere	MTTQHLEEECRMAGKHVRVVQFTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDTTAVEI*
Ga0157372_111665972	3300013307	Corn Rhizosphere	VAEQHLEEEVSPMAGKHVRVVRLTGDDAYERIWDLVKVGAVVSVEFVRDGHQRMLATTTIVDEHGVTVDQTAVEV*
Ga0157372_125870482	3300013307	Corn Rhizosphere	VQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDRTAVEV*
Ga0157375_102483386	3300013308	Miscanthus Rhizosphere	VAEQHLEEEVSPMAGKHVRVVQFTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDTTAVEI*
Ga0157375_106282372	3300013308	Miscanthus Rhizosphere	VTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDRTAVEV*
Ga0157375_113421812	3300013308	Miscanthus Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVVDHGATVDQTVVEV*
Ga0157375_133636482	3300013308	Miscanthus Rhizosphere	MAGKHVRVVQLTGDDTYERIWELVKVGAVVSVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEM*
Ga0163163_127324462	3300014325	Switchgrass Rhizosphere	VTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI*
Ga0182008_104830591	3300014497	Rhizosphere	MAGKHRRIVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0132258_101269128	3300015371	Arabidopsis Rhizosphere	LADTHPEEGRMAGKHRRVVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV*
Ga0132257_1031702091	3300015373	Arabidopsis Rhizosphere	MAGKHVRVVQLNGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEG*
Ga0163161_104151252	3300017792	Switchgrass Rhizosphere	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV
Ga0163161_105337822	3300017792	Switchgrass Rhizosphere	VVLPLSMTAQYLEEECQMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDRTAVEI
Ga0163161_119082651	3300017792	Switchgrass Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV
Ga0190267_115999152	3300019767	Soil	AGKHVRVVQLDGDDVYERIWDLVSLGAVESVQFVRDGHQRMLATTTIVDDHGVTVDETAVEI
Ga0206354_111484701	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	PVELDVGTTHRRRSQMAGKHRRVVPVTGDETYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV
Ga0206353_108850273	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MAGKHRRVVPVTGDETYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV
Ga0207643_111161352	3300025908	Miscanthus Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDH
Ga0207707_100307867	3300025912	Corn Rhizosphere	MAGKHRRVVPVTGDETYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQT
Ga0207662_104788852	3300025918	Switchgrass Rhizosphere	VVLPLSMTAQYLEEECQMAGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM
Ga0207687_109844481	3300025927	Miscanthus Rhizosphere	RGTMAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV
Ga0207686_106224151	3300025934	Miscanthus Rhizosphere	MEGKHRRVVSVHGDDTYERIYDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV
Ga0207704_119894612	3300025938	Miscanthus Rhizosphere	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLADNRQMLATTTIVDDHGVTVDQTVVEV
Ga0207691_116113492	3300025940	Miscanthus Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHSVTVDQTVVEV
Ga0207689_109161372	3300025942	Miscanthus Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTIDQTV
Ga0207661_100314372	3300025944	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDRTVVEV
Ga0207661_106058232	3300025944	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTIVEV
Ga0207658_102841602	3300025986	Switchgrass Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTAVEM
Ga0207639_108863881	3300026041	Corn Rhizosphere	VVLPLSMTAQYLEEECQMAGKHVKVVQLNGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTVVEV
Ga0207702_112382841	3300026078	Corn Rhizosphere	MAGKHRRVVQVHGDDTYERIWELVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTV
Ga0207676_102756274	3300026095	Switchgrass Rhizosphere	ERPQHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDQTVVEV
Ga0207981_10197754	3300027560	Soil	MGSSPQLVTAQYLEEECRMAGKHVRVVQLAGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI
Ga0209811_100829392	3300027821	Surface Soil	MAGKHVRVVHLNGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTVVEV
Ga0268266_101430733	3300028379	Switchgrass Rhizosphere	MAGKHRRVVEVHGDDTYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV
Ga0268264_111562822	3300028381	Switchgrass Rhizosphere	MAGKHVRVVQLTGDDTYERIWELVKVGAVVSVVFVRDGHQRMLATTTIVDDHGVTVDQTAVEM
Ga0302169_100297512	3300028679	Fen	MAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI
Ga0302264_10501341	3300028732	Fen	LEEECQMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI
Ga0302258_10467451	3300028770	Fen	LRWTPPPCPVTTQYLEEECRMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI
Ga0307503_101240242	3300028802	Soil	MGEEHAGPGKHARVVQVCGDDTYERIWELVRLGAVVSVEFVPAGDRRMLATTTIMDEKGITVDTTVVEV
Ga0307281_104461292	3300028803	Soil	MGEEHAGPGKHARVVQVCGDDTYERIWELVRLGAVVSVEFVPAGDRRMLATTTIMDEKGITVDTTVVEL
Ga0302263_101642342	3300028869	Fen	MAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDQTAVEI
Ga0302255_10361551	3300030050	Fen	SVITQYLEEECQMAGKHVRVVQLTGDDTYERIWELVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDKTAVEI
Ga0308175_10000356512	3300031938	Soil	MGKHRRGVPVHGDETYERIWDMVGQGAVVSTEFVMCGARQMLATTTIVDDHGVTVDQTVVQV
Ga0308175_10000371712	3300031938	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLSDDRQMLATTTIVDDHGVTVDCTVVEV
Ga0308175_1000700183	3300031938	Soil	MAGKHRRVVQVHGDDTYERIWDIVRLGAVVSVEFVLTDDRQMLATTTIVDDHGVTVDQTVVEV
Ga0308175_1003239852	3300031938	Soil	MGKHRRGVPVHGDETYERIWDLVGQGAVVSTEFVMCGDRQMLATTTIVDDHGVTVDQTVVEV
Ga0308175_1008745201	3300031938	Soil	MGEEHTGPGKHARVVQVCGDDTYERIWDLVRLGAVVSVEFVPSGDRRMLATTTILDEKGITVDTTVVEL
Ga0308175_1013232683	3300031938	Soil	GMAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVLADDRQMLATTTIVDDHGVTVDQTVVEV
Ga0308175_1022191251	3300031938	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVHSDERQMLATTTIVDDHGVTVDRTVVEV
Ga0308175_1030572441	3300031938	Soil	MAGKHVRVVQLTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVD
Ga0308174_109820712	3300031939	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVHSDERQMLATTTIVDDHGVTVDQTVVEV
Ga0308174_113836211	3300031939	Soil	MGEEHARPGKHARVVQVCGDETYERIWELVRLGAVVSVEFVPAGDRRMCATTTIVDDKGVTVDTTVVEV
Ga0308176_101199785	3300031996	Soil	MAGKHVRVVQLTGDDTYERIWDLVKVGAVVTVEFVRDGHQRMLATTTIVDDHGVTVDRTAVEI
Ga0308176_114791331	3300031996	Soil	LPPVELDVGTTHRRRSQMAGKHRRVVPVTGDETYERIWDLVRLGAVVSVEFVLSDERQMLATTTIVDDHGVTVDQTVVEV
Ga0308173_107571442	3300032074	Soil	MAGKHRRVVQVHGDDTYERIWDLVRLGAVVSVEFVHSDERQMLATTTIVDD
Ga0372943_0137654_353_541	3300034268	Soil	MGKHRRGVPVHGDETYELIWDMVGDGAVVSTEFVMCGDRQMLATTTIVDDHGVTVDQTVIQV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064822

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences