Metagenome / Metatranscriptome Family F064761

Overview

Basic Information

• Family ID: F064761
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 128
• Average Sequence Length: 48 residues
• Representative Sequence: VAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
• Number of Associated Samples: 115
• Number of Associated Scaffolds: 128

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 99.22 %
• % of genes from short scaffolds (< 2000 bps): 96.09 %
• Associated GOLD sequencing projects: 112
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (87.500 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.344 % of family members)
• Environment Ontology (ENVO): Unclassified (18.750 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.562 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 29.73%
  β-sheet: 0.00%
  Coil/Unstructured: 70.27%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04909	Amidohydro_2	16.41
PF01715	IPPT	2.34
PF07282	OrfB_Zn_ribbon	0.78
PF03473	MOSC	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	2.34

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.16 %
Unclassified	root	N/A	12.50 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.16 %
Unclassified	root	N/A	12.50 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.47 %
Unclassified	root	N/A	12.50 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.78 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.78 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
Saccharothrix obliqua	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.78 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001686|C688J18823_10631022	Not Available	683
3300004114|Ga0062593_102716015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564
3300005435|Ga0070714_101791609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599
3300005435|Ga0070714_102051839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557
3300005436|Ga0070713_101206248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732
3300005437|Ga0070710_11344306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532
3300005518|Ga0070699_101339162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657
3300005542|Ga0070732_10323031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	928
3300005556|Ga0066707_10577844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721
3300005764|Ga0066903_105624201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660
3300005840|Ga0068870_10246381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106
3300006034|Ga0066656_11068219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	519
3300006162|Ga0075030_101278127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576
3300006358|Ga0068871_100440387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166
3300006603|Ga0074064_11808775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	589
3300007982|Ga0102924_1338451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585
3300009012|Ga0066710_101695423	Not Available	962
3300010043|Ga0126380_10234266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258
3300010048|Ga0126373_12932598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532
3300010152|Ga0126318_10091354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624
3300010154|Ga0127503_10478475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525
3300010154|Ga0127503_11233793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557
3300010301|Ga0134070_10392629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300010322|Ga0134084_10087757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976
3300010339|Ga0074046_10659807	Not Available	616
3300010364|Ga0134066_10327128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560
3300010371|Ga0134125_12088162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616
3300010373|Ga0134128_10560898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1272
3300010869|Ga0126359_1590164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300011106|Ga0151489_1387367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	965
3300011120|Ga0150983_15641261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570
3300012199|Ga0137383_10520238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	871
3300012205|Ga0137362_11108421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673
3300012209|Ga0137379_10269078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616
3300012210|Ga0137378_10703558	Not Available	921
3300012211|Ga0137377_10815461	Not Available	866
3300012285|Ga0137370_10418705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813
3300012505|Ga0157339_1026842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650
3300012515|Ga0157338_1006090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106
3300012519|Ga0157352_1097892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516
3300012925|Ga0137419_11496292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572
3300013307|Ga0157372_12555357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586
3300014497|Ga0182008_10481348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680
3300016371|Ga0182034_10501043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013
3300017926|Ga0187807_1072132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075
3300017933|Ga0187801_10090611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152
3300017937|Ga0187809_10226877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670
3300017943|Ga0187819_10190982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211
3300017955|Ga0187817_11107237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508
3300017959|Ga0187779_10204437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1237
3300017961|Ga0187778_10873818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617
3300017961|Ga0187778_11210300	All Organisms → cellular organisms → Bacteria	529
3300017973|Ga0187780_10245579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1253
3300017974|Ga0187777_11175486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560
3300017975|Ga0187782_10189534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1537
3300017975|Ga0187782_10663055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803
3300018060|Ga0187765_11012070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571
3300018433|Ga0066667_10366637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152
3300020199|Ga0179592_10166051	Not Available	1007
3300020581|Ga0210399_10135221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua	2031
3300020581|Ga0210399_10491317	Not Available	1021
3300020583|Ga0210401_10274315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546
3300020583|Ga0210401_10533063	Not Available	1036
3300021171|Ga0210405_10641530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824
3300021388|Ga0213875_10065479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1698
3300021388|Ga0213875_10670964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503
3300021401|Ga0210393_10368887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1169
3300021401|Ga0210393_10372435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163
3300021403|Ga0210397_10864344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699
3300021407|Ga0210383_10130263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2130
3300021420|Ga0210394_11715726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526
3300021432|Ga0210384_10499922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094
3300021474|Ga0210390_10511808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010
3300021475|Ga0210392_10286447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1177
3300021478|Ga0210402_11778702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542
3300022527|Ga0242664_1060686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711
3300022528|Ga0242669_1056475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683
3300022716|Ga0242673_1058723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666
3300024227|Ga0228598_1060270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756
3300024310|Ga0247681_1067559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562
3300024323|Ga0247666_1064442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734
3300025900|Ga0207710_10216077	Not Available	951
3300025905|Ga0207685_10772418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528
3300025909|Ga0207705_10380968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089
3300025928|Ga0207700_10623761	Not Available	960
3300026142|Ga0207698_10347152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400
3300026547|Ga0209156_10491440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507
3300026557|Ga0179587_10227981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1187
3300027058|Ga0209111_1041090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590
3300027765|Ga0209073_10526017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502
3300027775|Ga0209177_10085281	Not Available	973
3300027775|Ga0209177_10282455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626
3300027775|Ga0209177_10435264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533
3300027842|Ga0209580_10035759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2274
3300027884|Ga0209275_10184096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122
3300027894|Ga0209068_10710582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300028906|Ga0308309_10541991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008
3300030743|Ga0265461_10041729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655
3300031446|Ga0170820_14117570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592
3300031546|Ga0318538_10007546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4321
3300031681|Ga0318572_10877967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533
3300031715|Ga0307476_10504925	Not Available	896
3300031715|Ga0307476_11070945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592
3300031770|Ga0318521_10710934	Not Available	610
3300031771|Ga0318546_10380285	Not Available	984
3300031805|Ga0318497_10326070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856
3300031819|Ga0318568_10014453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4160
3300031820|Ga0307473_10557460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784
3300031821|Ga0318567_10196923	Not Available	1124
3300031823|Ga0307478_10428332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1098
3300031831|Ga0318564_10215308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854
3300031859|Ga0318527_10322850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658
3300031890|Ga0306925_12055976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300031896|Ga0318551_10223378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047
3300031912|Ga0306921_12623182	All Organisms → cellular organisms → Bacteria	520
3300031941|Ga0310912_10770709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744
3300031942|Ga0310916_11243003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615
3300032025|Ga0318507_10531788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511
3300032054|Ga0318570_10559458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522
3300032063|Ga0318504_10182937	Not Available	974
3300032076|Ga0306924_11273378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791
3300032180|Ga0307471_104132630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513
3300032515|Ga0348332_11677989	All Organisms → cellular organisms → Bacteria	546
3300032515|Ga0348332_11891651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550
3300032897|Ga0335071_10250939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1723
3300032897|Ga0335071_11007769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	779
3300032898|Ga0335072_11060975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736
3300034818|Ga0373950_0113992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.84%
Host-Associated	Host-Associated	10.16%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.25%
Plants	Host-Associated → Plants	10.16%
Aquatic	Environmental → Aquatic	8.59%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.69%
Freshwater	Environmental → Aquatic → Freshwater	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%
Roots	Host-Associated → Plants → Roots	2.34%
Sediment	Environmental → Aquatic → Sediment	1.56%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.16%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.56%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_106310222	3300001686	Soil	IWLVVAVVAVLFAPGTARKLGAALAAREGIVAPGEDDPAPPLTAARDEMT*
Ga0062593_1027160151	3300004114	Soil	IVVIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDETA*
Ga0070714_1017916092	3300005435	Agricultural Soil	WIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0070714_1020518391	3300005435	Agricultural Soil	AVVAVLFAPGTARRLGAALAAREGIVAPGTEDAAAPRLATARDETT*
Ga0070713_1012062481	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WLAVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0070710_113443062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0070699_1013391621	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA*
Ga0070732_103230312	3300005542	Surface Soil	IVAVIVAPGTARKLGAALAAREGIKAPDGTTGQVASPRLATAGDEPA*
Ga0066707_105778441	3300005556	Soil	IWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0066903_1056242012	3300005764	Tropical Forest Soil	IAVIFAAGTARKLGAALAAREGIKAPGTEEPVPKVAAARDETS*
Ga0068870_102463812	3300005840	Miscanthus Rhizosphere	VWPWPTGSAAWIPLTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0066656_110682191	3300006034	Soil	NVWPWPAGVAAWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIRAPGTGEPEPRLAAARDETA*
Ga0075030_1012781271	3300006162	Watersheds	VAVIVAPGTARKLGAALAAREGIAGPGEDAASGGPRLAAVRDEAP*
Ga0068871_1004403871	3300006358	Miscanthus Rhizosphere	SGIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA*
Ga0074064_118087752	3300006603	Soil	RNVWPWPAGSAAWIPSVAGIWLVVAVIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA*
Ga0102924_13384512	3300007982	Iron-Sulfur Acid Spring	IVAVIFAAGTARKLGVALAAREGIKAPGEEQPAAARHRLASARDEAS*
Ga0066710_1016954232	3300009012	Grasslands Soil	AAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0126380_102342661	3300010043	Tropical Forest Soil	NVWPWPAGSAAWIPLTSGIWLVVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPAPRLAAARDETP*
Ga0126373_129325981	3300010048	Tropical Forest Soil	AAGTARKLGAALAAREGIKAPGTEEPAPRLAAARDEAP*
Ga0126318_100913542	3300010152	Soil	AWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPARKVAAARDETP*
Ga0127503_104784752	3300010154	Soil	GTARKLGAALAAREGIKAPGTEEPEPRLAAARDEPA*
Ga0127503_112337931	3300010154	Soil	IWLIVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0134070_103926291	3300010301	Grasslands Soil	SGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKLAAARDETA*
Ga0134084_100877571	3300010322	Grasslands Soil	GSAAWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDESA*
Ga0074046_106598071	3300010339	Bog Forest Soil	TARKLGAALAAREGIAAPGAEEAAPRLTAVRDEAP*
Ga0134066_103271281	3300010364	Grasslands Soil	AAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDETA*
Ga0134125_120881622	3300010371	Terrestrial Soil	LTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0134128_105608982	3300010373	Terrestrial Soil	PGTARRLGAALAAREGIVAPGTEDAAAPRLAAARDETT*
Ga0126359_15901641	3300010869	Boreal Forest Soil	RKLGAALAAREGIVAPGDEDPAPPLTVARDETARGS*
Ga0151489_13873672	3300011106	Soil	IVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDEPA*
Ga0150983_156412612	3300011120	Forest Soil	VAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA*
Ga0137383_105202382	3300012199	Vadose Zone Soil	GSAAWIPLTSGIWLAVAVIAVIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDESA*
Ga0137362_111084212	3300012205	Vadose Zone Soil	VGATLGPRDGVVAVIFAPGTARKLGAALAAREGIVAPGAEEPAPRLAAARDEASS*
Ga0137379_102690781	3300012209	Vadose Zone Soil	RKLGVALAAREGIAAPGAPDAAGRPGLAAVRDEAS*
Ga0137378_107035582	3300012210	Vadose Zone Soil	LTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKLAAARDETA*
Ga0137377_108154611	3300012211	Vadose Zone Soil	VAVIVVIFAAGTARKLGAALAAREGIKPPGIEEPAPRLAAARDETA*
Ga0137370_104187051	3300012285	Vadose Zone Soil	AVIFAAGTARKLGAALAAREGIKAPGTEEPAPRLAAARDETA*
Ga0157339_10268421	3300012505	Arabidopsis Rhizosphere	VAVIVVIFAAGTARKLGAALAAREGIKAPGIEEPEPRLAAARDETA*
Ga0157338_10060902	3300012515	Arabidopsis Rhizosphere	GSAAWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIRAPGTEEPDPRLAAARDETA*
Ga0157352_10978921	3300012519	Unplanted Soil	LVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA*
Ga0137419_114962921	3300012925	Vadose Zone Soil	TARKLGAALAAREGIKAPGTEEPEPRLAAARDETA*
Ga0157372_125553571	3300013307	Corn Rhizosphere	IWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA*
Ga0182008_104813481	3300014497	Rhizosphere	RNVWPWPAGSAAWIPLTSGIWLIVAIIVVIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDETA*
Ga0182034_105010432	3300016371	Soil	FAAGTARKLGAALAAREGIKAPGTEEPVPKVAAAHDETP
Ga0187807_10721321	3300017926	Freshwater Sediment	WLAVAIVAVLAAPGTARKLGAALTAREGIKAPDGTPEQVAAPRLATAGDEPA
Ga0187801_100906111	3300017933	Freshwater Sediment	TARKLGAALALREGIKAPDGTTEQVAAPRLATAGDEPA
Ga0187809_102268772	3300017937	Freshwater Sediment	IVAPRTARKLGAALAAREGIKAPDGETAAEVPAGIATAGDEAS
Ga0187819_101909822	3300017943	Freshwater Sediment	ARKLGAALTAREGIKAPDGTTEQVAAPLATASDESA
Ga0187817_111072372	3300017955	Freshwater Sediment	VAIIAVIVAPRTARKLGAALAAREGIKAPDGETVAEVPAGIATAGDEAS
Ga0187779_102044371	3300017959	Tropical Peatland	VIFAPRTARKLGAALASREGIVAPGAEEPAPRLAAARDEAP
Ga0187778_108738182	3300017961	Tropical Peatland	APRTARKLGAALAAREGIAAPGTEEPAPRLAAARDEAP
Ga0187778_112103002	3300017961	Tropical Peatland	VIAVIFAPRTARKLGAALAAREGIAAPGTEEPAPRLAAARDEAS
Ga0187780_102455792	3300017973	Tropical Peatland	RKLGAALAAREGIKAPDGEAAAEVPAQLAAAGDEAS
Ga0187777_111754861	3300017974	Tropical Peatland	AAWFPVVSGVWLVVAVIAVIFAAGTARKLGAALAAREGIVAPGAEEEKARRGLAVVRDEA
Ga0187782_101895343	3300017975	Tropical Peatland	KLGAALTARAGINAPDGEPEQVPSPRLATAGDESS
Ga0187782_106630551	3300017975	Tropical Peatland	KLGAALTAREGIKAPDGETAADVPAGIATAGDEVS
Ga0187765_110120701	3300018060	Tropical Peatland	VIFAPGTARKLGAALQAREGIAAPGTDEGKHRRRLAAVRDEAP
Ga0066667_103666372	3300018433	Grasslands Soil	VVAIIVVVFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0179592_101660511	3300020199	Vadose Zone Soil	WPWPTGSAGWIPSIAGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0210399_101352211	3300020581	Soil	AGIWLIVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0210399_104913171	3300020581	Soil	WPSGSAKWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKPPGIEEPAPRLAAARDETA
Ga0210401_102743153	3300020583	Soil	GVWLAVAVVAVIVAAGTARKLGAALAAREGIKAPDDTEVPVPSQLAAAGDETS
Ga0210401_105330631	3300020583	Soil	GTARKLGAALAAREGIKAPDEIEVPVPSQLAAAGDEAS
Ga0210405_106415301	3300021171	Soil	VVAGVWLAVAVVAVIVAAGTARKLGAALAAREGIKAPDDTEVPVPSQLAAAGDETS
Ga0213875_100654793	3300021388	Plant Roots	LVVVIVAVLFAPGTARKLGAALAAREGIVAPGTEDAAAPRLAAARDDVP
Ga0213875_106709641	3300021388	Plant Roots	VVSGVWLAVAVVAVIFAPGTARKLGAALAAREGIVAPGAEEADTRRRGLAAVRDEGS
Ga0210393_103688872	3300021401	Soil	AVIVAAGTARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0210393_103724351	3300021401	Soil	IVAAGTARKLGAALAAREGIKAPDDTEVPVPSQLAAAGDETS
Ga0210397_108643441	3300021403	Soil	TARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0210383_101302631	3300021407	Soil	FAPGTARKLGAALQAREGIAAPGTEEAAAPRLASARDDAS
Ga0210394_117157261	3300021420	Soil	TARKLGAALQAREGIAAPGTKEAAAPRLASARDDAS
Ga0210384_104999221	3300021432	Soil	AGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0210390_105118082	3300021474	Soil	VAGVWLAVAVVAVIVAAGTARKLGAALAAREGIKAPDDTEVPVPSQLAAAGDETS
Ga0210392_102864471	3300021475	Soil	IVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0210402_117787022	3300021478	Soil	WPWPAGAAGWIPSVSGIWLAVAVIVVIFAGGTARKLGAALTAREGIRAPGTEEPAPRLAAARDETA
Ga0242664_10606862	3300022527	Soil	AVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0242669_10564752	3300022528	Soil	VAVIVAAGTARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0242673_10587232	3300022716	Soil	GVWLVVAVVAVLVAAGTARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0228598_10602701	3300024227	Rhizosphere	WLVAAVIAVIFAPRTARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0247681_10675591	3300024310	Soil	WIPLTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0247666_10644421	3300024323	Soil	GSAAWIPLTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLASARDET
Ga0207710_102160771	3300025900	Switchgrass Rhizosphere	TSGIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0207685_107724182	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GSAAWIPLTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDET
Ga0207705_103809682	3300025909	Corn Rhizosphere	LIVAVIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0207700_106237612	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	WLVVAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0207698_103471521	3300026142	Corn Rhizosphere	LTSVIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0209156_104914401	3300026547	Soil	IPLTSGIWLAVAVVVVIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDETA
Ga0179587_102279812	3300026557	Vadose Zone Soil	VAGIWLVGAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0209111_10410901	3300027058	Forest Soil	VIFAAGTARKLGAALAAREGIKAPGTEEPEPRLAAARDETA
Ga0209073_105260171	3300027765	Agricultural Soil	VSGIWLAVVVVAVLFAPGTARRLGAALAAREGIVAPGTEDAAAPRLATARDETA
Ga0209177_100852811	3300027775	Agricultural Soil	LAVAIVVVIFAAGTARKLGAALAAREGIRAPGAEEPEPRLAAARDETA
Ga0209177_102824551	3300027775	Agricultural Soil	IFAAGMARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0209177_104352642	3300027775	Agricultural Soil	VAVLFAPGTARRLGAALAAREGIVAPGTEGAAPPKLAAARDDTP
Ga0209580_100357593	3300027842	Surface Soil	VAIVAVIAAPGTARKLGAALAAREGIKAPDGTTGQVASPRLATAGDEPA
Ga0209275_101840962	3300027884	Soil	TARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0209068_107105822	3300027894	Watersheds	GTARKLGAALAAREGIKAPGTEEPAPRLAAAQDETS
Ga0308309_105419912	3300028906	Soil	VAVIVVIFAAGTARKLGAALAAREGIKAPGVEEPAPRLAAARDETA
Ga0265461_100417294	3300030743	Soil	VIFAPGTARKLGAALQAREGIAAPGTEEAAAPRLASARDDAS
Ga0170820_141175701	3300031446	Forest Soil	IWLVVAVIAVIFAAGTARKLGAALAAREGIRAPGTEQPAPKVAAARDETS
Ga0318538_100075461	3300031546	Soil	QVTPGTARKLGLALAAREGIKAPDGTTAAVPVSPLAAAGDEAS
Ga0318572_108779671	3300031681	Soil	GIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKLAAARDETP
Ga0307476_105049252	3300031715	Hardwood Forest Soil	VIVVIFAAGTARKLGAALAAREGIRAPGVEEPAPRLAAARDETA
Ga0307476_110709451	3300031715	Hardwood Forest Soil	IAAAGTARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0318521_107109342	3300031770	Soil	VVSGIWLAVAVIAVIFAAGTARKLGAALAAREGIKAPGTEEPVPKVAAARDETS
Ga0318546_103802851	3300031771	Soil	VIAVIFAPRTARKLGEALAAREGIVAPGTEEAAPRLAAARDEAP
Ga0318497_103260702	3300031805	Soil	SRAAWIPLTSGIWLAVAVIVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKVAAARDET
Ga0318568_100144531	3300031819	Soil	SGIWLVVAVIAVLLAPGTARKLGAALAAREGIEAPGTEEPAPWLAAAHDETP
Ga0307473_105574602	3300031820	Hardwood Forest Soil	IIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0318567_101969231	3300031821	Soil	SGIWLAVAVIAVIFAPGTARKLGAALAAREGIKAPGTEEPVPKVAAAHDETP
Ga0307478_104283322	3300031823	Hardwood Forest Soil	VAVIVAAGTARKLGAALAAREGIKAPDETEVQVPSQLAAAGDEAS
Ga0318564_102153082	3300031831	Soil	VVAGAWLVVAVIAVIWAPRTARKLGAALAAREGIAAPGVEESPRLAAARDEAS
Ga0318527_103228502	3300031859	Soil	FPVVSGIWLAVAVIAVIFAAGTARKLGAALAAREGIKAPGTEEPVPKVAAARDETS
Ga0306925_120559762	3300031890	Soil	AWIPLTSGIWLAVAVVVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKVAAAHDESP
Ga0318551_102233781	3300031896	Soil	VAVIAVIFAAGTARKLGAALAAREGIKAPGTEEPVPKVAAARDETS
Ga0306921_126231821	3300031912	Soil	APGTARKLGLALAAREGIKAPDGTTAEVPASPLATATDETS
Ga0310912_107707091	3300031941	Soil	AVAVIAVIFAPRTARKLGEALAAREGIVAPGTEEAAPRLAAARDEAP
Ga0310916_112430031	3300031942	Soil	GIWLAVAVVVVIFAAGTARKLGAALAAREGIKAPGTEEPAPKLAAARDETP
Ga0318507_105317882	3300032025	Soil	WFPVVAGIWLAVAVIAVIFAPRTARKLGEALAAREGIVAPGTEEAAPRLAAARDEAP
Ga0318570_105594582	3300032054	Soil	VAVIAVIFAPGTARKLGAALAAREGIKAPGTEEPAPKVAAAHDETT
Ga0318504_101829371	3300032063	Soil	FAPRTARKLGAALAAREGIAAPGTEEAVPRLAAARDEAP
Ga0306924_112733782	3300032076	Soil	AAGTARKLGAALAAREGIKAPGTEEPVPKVAAARDETS
Ga0307471_1041326302	3300032180	Hardwood Forest Soil	IVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA
Ga0348332_116779892	3300032515	Plant Litter	ARKLGAALAAREGIKAPDETEVQVPSQLAAAGDEAS
Ga0348332_118916511	3300032515	Plant Litter	ARKLGAALAAREGIKAPDETEVPVPSQLAAAGDEAS
Ga0335071_102509393	3300032897	Soil	IVAVLFAPGTARRLGAALAAREGIVAPGTEGAAPPRLAAARDDTP
Ga0335071_110077691	3300032897	Soil	AVIAVIFAPGTARKLGAALAAREGIKAPGTEEPAPKVAAARDETS
Ga0335072_110609752	3300032898	Soil	WIPLTAGIWLAVAVIVVIFASGTARKLGAALAEREGITAPGTEEPAPRLAAARDETS
Ga0373950_0113992_412_591	3300034818	Rhizosphere Soil	AAWIPLTSGIWLVVAIIVVIFAAGTARKLGAALAAREGIRAPGTEEPEPRLAAARDETA