Metagenome / Metatranscriptome Family F064705

Basic Information
Family ID	F064705
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	46 residues
Representative Sequence	MSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY
Number of Associated Samples	121
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.25 %
% of genes near scaffold ends (potentially truncated)	41.41 %
% of genes from short scaffolds (< 2000 bps)	92.97 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (97.656 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.062 % of family members)
Environment Ontology (ENVO)	Unclassified (39.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.781 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.17% β-sheet: 0.00% Coil/Unstructured: 63.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00440	TetR_N	59.38
PF04055	Radical_SAM	20.31
PF00106	adh_short	1.56
PF07336	ABATE	1.56
PF13561	adh_short_C2	0.78
PF01694	Rhomboid	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	1.56
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.88 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.88 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	42.97 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	7.81 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	7.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	7.03 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2.34 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	3.12 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Unclassified	root	N/A	2.34 %
Amycolatopsis saalfeldensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.12 %
Frankia sp. EAN1pec	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EAN1pec	2.34 %
Unclassified	root	N/A	2.34 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.78 %
Amycolatopsis saalfeldensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1213254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
2166559006\|FI_contig04002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EAN1pec	1630	Open in IMG/M
2170459016\|G1P06HT01DFAZB	Not Available	607	Open in IMG/M
2170459017\|G14TP7Y01BEO4K	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	583	Open in IMG/M
2189573002\|GZIGXIF02I6SA9	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
2189573002\|GZIGXIF02JZFP5	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
2199352025\|deepsgr__Contig_162845	Not Available	681	Open in IMG/M
3300003659\|JGI25404J52841_10014789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EAN1pec	1694	Open in IMG/M
3300004114\|Ga0062593_101755863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300004803\|Ga0058862_12677421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	538	Open in IMG/M
3300005103\|Ga0066813_1016934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300005158\|Ga0066816_1027701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300005162\|Ga0066814_10022952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300005169\|Ga0066810_10017405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1155	Open in IMG/M
3300005175\|Ga0066673_10282321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300005175\|Ga0066673_10586178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300005177\|Ga0066690_10335836	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005186\|Ga0066676_10357778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300005327\|Ga0070658_10174744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1806	Open in IMG/M
3300005330\|Ga0070690_101669233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300005332\|Ga0066388_100574852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1753	Open in IMG/M
3300005336\|Ga0070680_100834345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300005337\|Ga0070682_100192007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1434	Open in IMG/M
3300005344\|Ga0070661_100081282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2392	Open in IMG/M
3300005356\|Ga0070674_101443585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	617	Open in IMG/M
3300005367\|Ga0070667_100714319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300005434\|Ga0070709_10626736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300005445\|Ga0070708_100227357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1750	Open in IMG/M
3300005451\|Ga0066681_10923626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300005558\|Ga0066698_10878685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300005566\|Ga0066693_10055235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1338	Open in IMG/M
3300005577\|Ga0068857_100676221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300005578\|Ga0068854_102224159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300005617\|Ga0068859_100270217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1792	Open in IMG/M
3300006572\|Ga0074051_11597219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300006573\|Ga0074055_11228481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300006575\|Ga0074053_10012967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300006579\|Ga0074054_12025044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300006581\|Ga0074048_13170598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300006755\|Ga0079222_12396796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300006791\|Ga0066653_10265138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300006804\|Ga0079221_11002005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300006871\|Ga0075434_100538559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300006881\|Ga0068865_100468468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300009162\|Ga0075423_10770565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300010046\|Ga0126384_10276949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1369	Open in IMG/M
3300010152\|Ga0126318_10560713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300010152\|Ga0126318_10949918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300010323\|Ga0134086_10502271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300010326\|Ga0134065_10075369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300010335\|Ga0134063_10744691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300010375\|Ga0105239_10922177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1003	Open in IMG/M
3300010376\|Ga0126381_104931711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300010396\|Ga0134126_11238346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300010396\|Ga0134126_11391754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300010397\|Ga0134124_11945012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300010401\|Ga0134121_12609858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010403\|Ga0134123_10245530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1554	Open in IMG/M
3300012200\|Ga0137382_10286841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300012201\|Ga0137365_10027065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	4421	Open in IMG/M
3300012206\|Ga0137380_10316868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1395	Open in IMG/M
3300012285\|Ga0137370_10698591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300012353\|Ga0137367_10049682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3161	Open in IMG/M
3300012355\|Ga0137369_10940192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300012358\|Ga0137368_10390250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300012360\|Ga0137375_10314858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300012380\|Ga0134047_1145024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	522	Open in IMG/M
3300012488\|Ga0157343_1002143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300012507\|Ga0157342_1002403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1517	Open in IMG/M
3300012532\|Ga0137373_10043630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4228	Open in IMG/M
3300012915\|Ga0157302_10328248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012976\|Ga0134076_10538636	Not Available	538	Open in IMG/M
3300012977\|Ga0134087_10182706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	930	Open in IMG/M
3300012986\|Ga0164304_10701738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300012987\|Ga0164307_10574540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300014326\|Ga0157380_10039931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3652	Open in IMG/M
3300015200\|Ga0173480_11104754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300015264\|Ga0137403_10098601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2931	Open in IMG/M
3300015371\|Ga0132258_11318614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1824	Open in IMG/M
3300015371\|Ga0132258_11319642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1823	Open in IMG/M
3300015373\|Ga0132257_101089907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300018431\|Ga0066655_10147042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300019361\|Ga0173482_10129300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300019883\|Ga0193725_1131978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300019885\|Ga0193747_1024287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1499	Open in IMG/M
3300020001\|Ga0193731_1168307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300020062\|Ga0193724_1069230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	738	Open in IMG/M
3300020070\|Ga0206356_10416711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1287	Open in IMG/M
3300020080\|Ga0206350_11551260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300020082\|Ga0206353_11468737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300020140\|Ga0179590_1165821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300020583\|Ga0210401_10446119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300021403\|Ga0210397_10312649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300021445\|Ga0182009_10299124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300021475\|Ga0210392_10541461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EAN1pec	860	Open in IMG/M
3300022504\|Ga0242642_1039797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300024178\|Ga0247694_1009472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1185	Open in IMG/M
3300024232\|Ga0247664_1114973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300024249\|Ga0247676_1012403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1313	Open in IMG/M
3300025885\|Ga0207653_10140853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	882	Open in IMG/M
3300025904\|Ga0207647_10130556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1477	Open in IMG/M
3300025906\|Ga0207699_10098851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1847	Open in IMG/M
3300025907\|Ga0207645_10150690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1518	Open in IMG/M
3300025908\|Ga0207643_10124577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1529	Open in IMG/M
3300025916\|Ga0207663_11143392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300025920\|Ga0207649_10293272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300025932\|Ga0207690_10299291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1258	Open in IMG/M
3300025935\|Ga0207709_10701733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300026088\|Ga0207641_10330945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1447	Open in IMG/M
3300027058\|Ga0209111_1010741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300027725\|Ga0209178_1079280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1078	Open in IMG/M
3300027725\|Ga0209178_1119933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300027787\|Ga0209074_10057865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300027787\|Ga0209074_10319993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	627	Open in IMG/M
3300028711\|Ga0307293_10168279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300028715\|Ga0307313_10064392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1089	Open in IMG/M
3300028768\|Ga0307280_10011819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2388	Open in IMG/M
3300028872\|Ga0307314_10209300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300031170\|Ga0307498_10059100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1066	Open in IMG/M
3300031184\|Ga0307499_10176709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300031198\|Ga0307500_10109792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300031226\|Ga0307497_10092349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1163	Open in IMG/M
3300031716\|Ga0310813_10681828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031996\|Ga0308176_10107542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300032074\|Ga0308173_10850499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300032205\|Ga0307472_101114516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300032770\|Ga0335085_10088250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4047	Open in IMG/M
3300032898\|Ga0335072_11212761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.12%
Host-Associated	Host-Associated	20.31%
Engineered	Engineered	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.56%
Plants	Host-Associated → Plants	19.53%
Aquatic	Environmental → Aquatic	1.56%
Solid Waste	Engineered → Solid Waste	1.56%
Human	Host-Associated → Human	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.38%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Grass	Engineered → Solid Waste → Grass	1.56%
Digestive System	Host-Associated → Human → Digestive System	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Composting	Engineered → Solid Waste → Grass → Composting	1.56%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.56%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.34%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02532430	2124908045	Soil	MSERVAIADVIEVPAAEPGLAQGELTELAEAELLVEEVSIDGMCG
FI_00073200	2166559006	Grass Soil	MSERVATADVIEVPAAEPELAQSELNELAEAELLVEEVSIDGMCGVY
2ZMR_02214230	2170459016	Switchgrass, Maize And Mischanthus Litter	VHERTRRDRDVIEAPVEEPELAEAELLVEEVSIDGMCGVY
4ZMR_05039830	2170459017	Switchgrass, Maize And Mischanthus Litter	MSERAATVDVIEVPVEEPELAEAELLVEEVSIDGMCGVY
FE1_00294720	2189573002	Grass Soil	TADVIEVPAAEPELAQSELNELAQAELLVEEVSIDGMCGVY
FE1_07192580	2189573002	Grass Soil	MSERVAIADVIEVPAAEPGLAQSELTETGLAEAELLVEEVSIDGMCGVY
deepsgr_02713750	2199352025	Soil	MSERVAIADVIEVPAAEPGLAQSELTETELAEAELLVEEVSIDGMCGVY
JGI25404J52841_100147893	3300003659	Tabebuia Heterophylla Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTGLTELTEAELLVEEVSIDGMCGVY*
Ga0062593_1017558632	3300004114	Soil	MSERVATADVIEVPAAEPGLAQGELSELAEAELLVEEVSIDGMCG
Ga0058862_126774212	3300004803	Host-Associated	MSERVATADVIEVPAAQPGLAQSELTDLAEAELLVEEVSIDGMCGVY*
Ga0066813_10169341	3300005103	Soil	MSERVATADVIEVPAAEPGLAQSELAETELAEAELAEAELLVEEVSIDG
Ga0066816_10277011	3300005158	Soil	MSERVATADVIEVPAAEPGLAQSDPTDLAEAELLVEEVSIDGMCGVY*
Ga0066814_100229522	3300005162	Soil	MSERVATADVIEVPAAEPGLAQSELAETELAETELAEAELAEAELLVEEVSIDGMCGVY*
Ga0066810_100174052	3300005169	Soil	MSERVATADVIEVPAAEPGLAQSEATETELAGTELAEAELLVEEVSIDGMCGVY*
Ga0066673_102823214	3300005175	Soil	ADVIEVPAAEPELAQSELTELAEAELLVEEVSIDGMCGVY*
Ga0066673_105861782	3300005175	Soil	MSERVATADVIEVPAAEPELVQGELTELAEAELLVEEVSIDG
Ga0066690_103358362	3300005177	Soil	MSERVATADVIEVPAAEPGLAQSELTETELTETELTETELTETELTEAELLVEEVSIDG
Ga0066676_103577781	3300005186	Soil	MSERVATADVIEVPAAEPGLAQSELNELAEAELLVEEVSIDGMC
Ga0070658_101747443	3300005327	Corn Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY*
Ga0070690_1016692332	3300005330	Switchgrass Rhizosphere	MSERVATADVIEVPGAEPGMTQGELTDLAEAELLVEEVSIDGMCGVY*
Ga0066388_1005748522	3300005332	Tropical Forest Soil	MSERVATADVIEVPAAEPELAQGELTELAEAELLVEEVSIDGMCGVY*
Ga0070680_1008343452	3300005336	Corn Rhizosphere	MSERVAIADVIEVPAPEPGPAQSKLTETELAEAELLVEEV
Ga0070682_1001920073	3300005337	Corn Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY*
Ga0070661_1000812822	3300005344	Corn Rhizosphere	MSERVAIADVIEVPAAEPGPAQSDPTDLAEAELLVEEVSIDGMCGVY*
Ga0070674_1014435852	3300005356	Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLAQSDLTDLAEAELLVEEVSIDGMCGVY*
Ga0070667_1007143191	3300005367	Switchgrass Rhizosphere	MSERVAIADVIEVPAPEPGPAQSELTETELAEAELLVEEVSI
Ga0070709_106267362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAATVDVIEVPVEEPELAEAELLVEEVSIDGMCGVY*
Ga0070708_1002273572	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLARSELTETELAEAELLVEEVSIDGMCGVY*
Ga0066681_109236262	3300005451	Soil	MSERVATADVIEVPAAEPELTRSELTQTELAEAELLVEEVSIDGMCGVY*
Ga0066698_108786852	3300005558	Soil	MSERVATADVIEVPAAEPGLAQSELNELAEAELLVEEVSIDGMCGVY*
Ga0066693_100552352	3300005566	Soil	MSERVAIADVIEVPPAEPELTQGEPAELAEAELLVEEVSIDGMCGVY*
Ga0068857_1006762213	3300005577	Corn Rhizosphere	MSERAATVDVIEAPEEEPELAEAELLVEEVSIDGMCGVY*
Ga0068854_1022241592	3300005578	Corn Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTDLAEAELLVEE
Ga0068859_1002702173	3300005617	Switchgrass Rhizosphere	MSERVATADVIEVPAAEPGLTQGELTELAEAELLVEEVSIDGMCGVY*
Ga0074051_115972191	3300006572	Soil	MSERVATADVIEVPAAEPGLAQSELTETELAEAELLVEE
Ga0074055_112284812	3300006573	Soil	MSERVATADVIEVPAAEPGLAQSELTETELAEAELLVEEVSIDGMCGVY*
Ga0074053_100129672	3300006575	Soil	MSERVATADVIEVPAAEPGLAQSELPGTELAEAELLVEEVSIDGMCGVY*
Ga0074054_120250442	3300006579	Soil	MSERVATADVIEVPAAEPGLAQSELTETELAEAELAEAELLVEEVSIDGMCGVY*
Ga0074048_131705981	3300006581	Soil	MSERVATADVIEVPAAEPGLAQSELTETELAEAELL
Ga0079222_123967961	3300006755	Agricultural Soil	EESVMSERAATVDVIEVPVEEPELAEAELLVEEVSIDGMCGVY*
Ga0066653_102651382	3300006791	Soil	MSERVAIADVIEVPAAEPELAQSELTELAEAELLVEEVSIDGMCGVY*
Ga0079221_110020052	3300006804	Agricultural Soil	MSERVATADVIEVPAAEPGLAQGELTELAEAELLVEEVSIDGMCGVY*
Ga0075434_1005385592	3300006871	Populus Rhizosphere	MSERVATADVIEVPAAEPGLTQGELAELAEAELLVEEVSIDGMCGVY*
Ga0068865_1004684681	3300006881	Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTDLAEAELLVEEVSI
Ga0075423_107705652	3300009162	Populus Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTETELAEAELLVEEVSIDGM
Ga0126384_102769493	3300010046	Tropical Forest Soil	MSERVATADVIEVPAAEPELAQSELTELAEAELLVEEVSIDGMCGVY*
Ga0126318_105607133	3300010152	Soil	EPGLAQGELAGTELAGTELAEAELLVEEVSIDGMCGVY*
Ga0126318_109499181	3300010152	Soil	IEVPAAGPELTQGELAELAEAELLVEEVSIDGMCGVY*
Ga0134086_105022713	3300010323	Grasslands Soil	VIEVPAAEPELAQSELTDSELAEAELLVEEVSIDGMCGVY*
Ga0134065_100753692	3300010326	Grasslands Soil	MSERVAIADVIEVPAAEPELAQSELTELAEAELLVE
Ga0134063_107446911	3300010335	Grasslands Soil	VIEVPAAEPGLAQSELNELAEAELLVEEVSIDGMCGVY*
Ga0105239_109221773	3300010375	Corn Rhizosphere	DVIEVPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY*
Ga0126381_1049317113	3300010376	Tropical Forest Soil	TVDVIEAPALEGAVEEPELAEAELLVEEVSIDGMCGVY*
Ga0134126_112383462	3300010396	Terrestrial Soil	MSERAATVDVIEAPAEEPELAEAELLVEEVSIDGMCGVY*
Ga0134126_113917543	3300010396	Terrestrial Soil	MSERVATADVIEVPAAEPELAQGELAELAEAELLVEEVSIDGMCGVY*
Ga0134124_119450122	3300010397	Terrestrial Soil	MSERVATADVIEVPGAEPGLAQGELTDLAEAELLVEEVSIDGMCGVY*
Ga0134121_126098583	3300010401	Terrestrial Soil	CAARESAMSERVATADIIEVPAAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY*
Ga0134123_102455302	3300010403	Terrestrial Soil	MSERVATADVIEVPTAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY*
Ga0137382_102868413	3300012200	Vadose Zone Soil	MSERVATADVIEVPAADPELARSELTQTELAEAGLLVEEVSIDGMCGVY*
Ga0137365_100270656	3300012201	Vadose Zone Soil	MSERVAIADVIEVPAAEPGLAQSELTETELAETELAEAELLVEEVSIDGMCGVY*
Ga0137380_103168683	3300012206	Vadose Zone Soil	MSERVAIADVIEVPVAEPGLAQSELTETELAETELAEAELLVEEVSIDGMCGVY*
Ga0137370_106985912	3300012285	Vadose Zone Soil	MSERVAIAEVIEVPAAEPELTQGEPAELAEAELLVEEVSIDGMCGVY*
Ga0137367_100496823	3300012353	Vadose Zone Soil	MSERVAIADVIEVPAAEPGLAQSKLTETELAETELAETELAEAELLVEEVSIDGMCGVY*
Ga0137369_109401921	3300012355	Vadose Zone Soil	MSERVATADVIEVPAAEPGLAQSKLTETELAETELAETELAEAELLVEEVSIDGMCG
Ga0137368_103902501	3300012358	Vadose Zone Soil	MSERVAIADVIEVPAAEPELAQSGLTDSELAEAELLVEEVSIDGMCGVY*
Ga0137375_103148582	3300012360	Vadose Zone Soil	MSERVAIADVIEVPAAEPGLAQSELTETELAETELAETELAEAELLVEEVSIDGMCGVY*
Ga0134047_11450241	3300012380	Grasslands Soil	ATADVIEVPAAEPGLAQSELNELAEAELLVEEVSIDGMCGVY*
Ga0157343_10021433	3300012488	Arabidopsis Rhizosphere	MSERVATADVIEVPAAEPEMTQGELTDLAEAELLVEEVSIDGMCGVY*
Ga0157342_10024033	3300012507	Arabidopsis Rhizosphere	MSERVATADVIEVPAAEPGLAQSELSELAEAELLVEEVSIDGMCGVY*
Ga0137373_100436306	3300012532	Vadose Zone Soil	MSERVAIADVIEVPAAEPGLAQSELTETELAEAELLVEEVSIDGMCGVY*
Ga0157302_103282482	3300012915	Soil	MSERVATADVIEVPAAEPGVAQGELTELAEAELLVEEVSIDGMCGVY*
Ga0134076_105386361	3300012976	Grasslands Soil	MSERVAIADVIEVPAAEPELAQSELTDSELAEAELLVEEVSIDGMC
Ga0134087_101827063	3300012977	Grasslands Soil	ESVMSERVATADVIEVPAAEPGLAQSELTETELTEAELLVEEVSIDGMCGVY*
Ga0164304_107017382	3300012986	Soil	MSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSIDG
Ga0164307_105745402	3300012987	Soil	MSARAATVDVIEAPVEEPELAEAELLVEEVSIDGMCGVY*
Ga0157380_100399315	3300014326	Switchgrass Rhizosphere	MSERVATADVIEVPASEPGLAQSDPTDLAEAELLVEEVSIDGMCGVY*
Ga0173480_111047541	3300015200	Soil	MSERVATADVIEVPGAEPGMTQGELTDLAEAEVLVEEVSIDGMCGVY*
Ga0137403_100986011	3300015264	Vadose Zone Soil	RVATADVIEVPAAEPELTRSELTQTELAEAELLVEEVSIDGMCGVY*
Ga0132258_113186142	3300015371	Arabidopsis Rhizosphere	MSERVAIADVIEVPAAEPELAPGELDELAEAELLVEEVSIDGMCGVY*
Ga0132258_113196421	3300015371	Arabidopsis Rhizosphere	MSERAATVDVIEIPAEEPELADAELLVEEVSIDGMCGVY*
Ga0132257_1010899073	3300015373	Arabidopsis Rhizosphere	VHVCAARESAMSERVAIADVIEVPAAEPELAPGELDELAEAELLVEEVSIDGMCGVY*
Ga0066655_101470422	3300018431	Grasslands Soil	MSERVATADVIEVPAAEPGLAQSELNELAEAELLVEEVSIDGMCGVY
Ga0173482_101293002	3300019361	Soil	MSERVATADVIEVPAAEPGLAQGELSELAEAELLVEEVSIDGMCGVY
Ga0193725_11319782	3300019883	Soil	MSERVAIADVIEVPAPEPGLAQSELAETELAEAELLVEEVSIDGMCGVY
Ga0193747_10242872	3300019885	Soil	MSERVATAVITEVPAAEPELAQGRLGENELAEAELLVEEV
Ga0193731_11683071	3300020001	Soil	MSERVAIADVIEVPAPEPGLAQSELTETELAEAELLVEEVSIDGMCGVY
Ga0193724_10692302	3300020062	Soil	MSERVATADVIEVPAAEPELAQSGLNELAEAELLVEEVSIDGMCGVY
Ga0206356_104167113	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY
Ga0206350_115512601	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VTKSYRRWARVGSEESVMSERAAIVDVIEAPVEEPELAEAELLVEEVSIDGMCGVY
Ga0206353_114687372	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLAQSDPTDLAEAELLVEEVSI
Ga0179590_11658211	3300020140	Vadose Zone Soil	MSERVATADVIEVPVAEPELTRSELTETGLAEAELLVEEVSIDGMCGVY
Ga0210401_104461192	3300020583	Soil	MSERVAIAEITENQAPAVEPELAQDELAQDELAEAELLVEEVSIDGMCGVY
Ga0210397_103126492	3300021403	Soil	MSERVATADVIEVPAAEPGLAPSDLTELAEAELLVEEVSIDGMCGVY
Ga0182009_102991241	3300021445	Soil	MSERVATADVIEVPAAEPGLAQGELTELAEAELLVEEVSIDGMCGVY
Ga0210392_105414613	3300021475	Soil	MSERVATADVIEVPAAEPGLAQSDLTELAEAELLVEEVSIDGMCGVY
Ga0242642_10397973	3300022504	Soil	MSERVAIAEITENQAPAVEPELAQDELAQDELAEAELLVEEVSIDGMCGLY
Ga0247694_10094722	3300024178	Soil	MSERVATADVIEVPAAEPGMTQGELTDLAEAELLVEEVSIDGMCGVY
Ga0247664_11149731	3300024232	Soil	MSERVATADVIEVPAAEPELTQGELTELAEAELLV
Ga0247676_10124031	3300024249	Soil	MSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSI
Ga0207653_101408533	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RESAMSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY
Ga0207647_101305563	3300025904	Corn Rhizosphere	MSERVATADVIEVPAAEPGLAQSDPTDLAEAELLVEEVSIDGMCGVY
Ga0207699_100988513	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSERVATADIIEVPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY
Ga0207645_101506901	3300025907	Miscanthus Rhizosphere	MSERVATADVIEVPAAEPGLAQSDPTDLAEAELLVEEVSIDGMCG
Ga0207643_101245771	3300025908	Miscanthus Rhizosphere	IIEVPAAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY
Ga0207663_111433922	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSERVATADVIEVPAAEPELAQGELAELAEAELLVEEVS
Ga0207649_102932723	3300025920	Corn Rhizosphere	MSERVATADVIEVPAAEPGPAQSDPTDLAEAELLVEEVSIDGMCGVY
Ga0207690_102992913	3300025932	Corn Rhizosphere	AMSERVATADIIEVPAAEPGLAQSELTDLAEAELLVEEVSIDGMCGVY
Ga0207709_107017333	3300025935	Miscanthus Rhizosphere	VPAAEPGLAQSELTELAEAELLVEEVSIDGMCGVY
Ga0207641_103309453	3300026088	Switchgrass Rhizosphere	MSERAATVDVIEVPVEEPELAEAELLVEEVSIEAMCGVYGGTDAGHAGRVRTLRP
Ga0209111_10107412	3300027058	Forest Soil	MSERVAIAEITENQAPAVEPELAQDELAEAELLVEEVSIDGMCGVY
Ga0209178_10792803	3300027725	Agricultural Soil	SEESVMSERAATVDVIEVPVEEPELAEAELLVEEVSIDGMCGVY
Ga0209178_11199331	3300027725	Agricultural Soil	MSERVATADVIEVPAAEPGLAQSELTELAEAELLVEEVSID
Ga0209074_100578651	3300027787	Agricultural Soil	MSERVATADVIEVPAAEPGLAQSELTETELAEAELLVEEVSIDGMCGVY
Ga0209074_103199931	3300027787	Agricultural Soil	CAARESAMSERVATADVIEVPAAEPGLAQGELTELAEAELLVEEVSIDGMCGVY
Ga0307293_101682792	3300028711	Soil	MSERVAIADVIEVPAPEPGLAQSELAETELAEAELLV
Ga0307313_100643923	3300028715	Soil	VPAAEPELAQSELNELAEAELLVEEVSIDGMCGVY
Ga0307280_100118194	3300028768	Soil	APEPGLAQSELAETELAEAELLVEEVSIDGMCGVY
Ga0307314_102093001	3300028872	Soil	MSERVATADVIEVPAAEPELAQSELNELAEAELLVEE
Ga0307498_100591002	3300031170	Soil	MSERVATADVIEVPAAEPELAQSELNELAQAELLVEEVSIDGMCGVY
Ga0307499_101767092	3300031184	Soil	MSERVATADVIEVPAAEPGLAQSELTEPELTEAELLVEEVSIDGMCGVY
Ga0307500_101097921	3300031198	Soil	EVPAAEPGLAQCELTELAEAELLVEEVSIDGMCGVY
Ga0307497_100923492	3300031226	Soil	MSERVAIADVIEVPAAEPELAQSELNELAQAELLVEEVSIDGMCGVY
Ga0310813_106818282	3300031716	Soil	MSERVATADVIEVPATEPGVAQGELTELAEAELLVEEVSIDGMCGVY
Ga0308176_101075421	3300031996	Soil	MSERVAIADVIEVPAAEPELAQSELTELAEAELLVEEVSIDGMCGVY
Ga0308173_108504992	3300032074	Soil	MSERVAIADVIEVPAAEPELAQGELTELAEAELLVEEVSIDGMCGVY
Ga0307472_1011145161	3300032205	Hardwood Forest Soil	MSERVATLDITEATGAEAAEAELAETELAEAELAEAELLVEEVSID
Ga0335085_100882501	3300032770	Soil	MSERVAIADVIEVPAAEPELAQSEPDELAEAELLVEEVSIDGMCGVY
Ga0335072_112127612	3300032898	Soil	MSERVATADVIEVPAAEPELAETELLVEEVSIDGMCGVY

Hidden Markov Model


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