Metagenome / Metatranscriptome Family F064589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	70 residues
Representative Sequence	QPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Number of Associated Samples	92
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	85.94 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (99.219 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.812 % of family members)
Environment Ontology (ENVO)	Unclassified (57.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.69% β-sheet: 0.00% Coil/Unstructured: 12.31%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01040	UbiA	25.00
PF00116	COX2	1.56
PF13450	NAD_binding_8	1.56
PF00033	Cytochrome_B	0.78
PF07992	Pyr_redox_2	0.78
PF00394	Cu-oxidase	0.78
PF01494	FAD_binding_3	0.78
PF03030	H_PPase	0.78
PF01992	vATP-synt_AC39	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.56
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	1.56
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	1.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.78
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.78
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.78
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.78
COG1527	Archaeal/vacuolar-type H+-ATPase subunit C/Vma6	Energy production and conversion [C]	0.78
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	99.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	19.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	15.62 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3.12 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	15.62 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1.56 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	15.62 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1.56 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	15.62 %
Nitrosarchaeum	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	0.78 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.78 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1017679	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1251	Open in IMG/M
3300002558\|JGI25385J37094_10025385	All Organisms → cellular organisms → Archaea	2108	Open in IMG/M
3300002558\|JGI25385J37094_10098367	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	872	Open in IMG/M
3300002558\|JGI25385J37094_10206254	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300002558\|JGI25385J37094_10219873	All Organisms → cellular organisms → Archaea	506	Open in IMG/M
3300002561\|JGI25384J37096_10118759	All Organisms → cellular organisms → Archaea	891	Open in IMG/M
3300002562\|JGI25382J37095_10128524	All Organisms → cellular organisms → Archaea	854	Open in IMG/M
3300002908\|JGI25382J43887_10025132	All Organisms → cellular organisms → Archaea	3199	Open in IMG/M
3300002908\|JGI25382J43887_10077870	All Organisms → cellular organisms → Archaea	1785	Open in IMG/M
3300002908\|JGI25382J43887_10081297	All Organisms → cellular organisms → Archaea	1740	Open in IMG/M
3300002908\|JGI25382J43887_10198577	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	967	Open in IMG/M
3300002908\|JGI25382J43887_10324157	All Organisms → cellular organisms → Archaea	662	Open in IMG/M
3300002908\|JGI25382J43887_10408571	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300002911\|JGI25390J43892_10048511	All Organisms → cellular organisms → Archaea	1006	Open in IMG/M
3300002912\|JGI25386J43895_10174751	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300005167\|Ga0066672_10402710	All Organisms → cellular organisms → Archaea	895	Open in IMG/M
3300005167\|Ga0066672_10552158	All Organisms → cellular organisms → Archaea	746	Open in IMG/M
3300005171\|Ga0066677_10209664	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1094	Open in IMG/M
3300005174\|Ga0066680_10298599	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1028	Open in IMG/M
3300005174\|Ga0066680_10439952	All Organisms → cellular organisms → Archaea	824	Open in IMG/M
3300005175\|Ga0066673_10009986	All Organisms → cellular organisms → Archaea	4023	Open in IMG/M
3300005176\|Ga0066679_10359459	All Organisms → cellular organisms → Archaea	952	Open in IMG/M
3300005177\|Ga0066690_10915532	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	559	Open in IMG/M
3300005180\|Ga0066685_11094335	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	521	Open in IMG/M
3300005447\|Ga0066689_10081110	All Organisms → cellular organisms → Archaea	1821	Open in IMG/M
3300005468\|Ga0070707_101863790	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
3300005536\|Ga0070697_100495230	All Organisms → cellular organisms → Archaea	1068	Open in IMG/M
3300005540\|Ga0066697_10749521	All Organisms → cellular organisms → Archaea	532	Open in IMG/M
3300005555\|Ga0066692_10424730	All Organisms → cellular organisms → Archaea	844	Open in IMG/M
3300005555\|Ga0066692_10523033	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300005556\|Ga0066707_10399465	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	895	Open in IMG/M
3300005557\|Ga0066704_10547425	All Organisms → cellular organisms → Archaea	754	Open in IMG/M
3300005561\|Ga0066699_10355518	All Organisms → cellular organisms → Archaea	1047	Open in IMG/M
3300005586\|Ga0066691_10382580	All Organisms → cellular organisms → Archaea	835	Open in IMG/M
3300006791\|Ga0066653_10295320	All Organisms → cellular organisms → Archaea	818	Open in IMG/M
3300006794\|Ga0066658_10833367	All Organisms → cellular organisms → Archaea	523	Open in IMG/M
3300006797\|Ga0066659_10031809	All Organisms → cellular organisms → Archaea	3166	Open in IMG/M
3300007258\|Ga0099793_10101423	All Organisms → cellular organisms → Archaea	1332	Open in IMG/M
3300007258\|Ga0099793_10526677	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300009012\|Ga0066710_100751247	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300009038\|Ga0099829_11331262	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300009088\|Ga0099830_10181942	All Organisms → cellular organisms → Archaea	1635	Open in IMG/M
3300009088\|Ga0099830_10929683	All Organisms → cellular organisms → Archaea	719	Open in IMG/M
3300009089\|Ga0099828_10215973	All Organisms → cellular organisms → Archaea	1713	Open in IMG/M
3300009089\|Ga0099828_11626424	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
3300009089\|Ga0099828_11812256	All Organisms → cellular organisms → Archaea	536	Open in IMG/M
3300009090\|Ga0099827_11118337	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	684	Open in IMG/M
3300009137\|Ga0066709_101326694	All Organisms → cellular organisms → Archaea	1053	Open in IMG/M
3300009137\|Ga0066709_103116378	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	606	Open in IMG/M
3300009137\|Ga0066709_103524858	All Organisms → cellular organisms → Archaea	568	Open in IMG/M
3300010107\|Ga0127494_1138588	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300010126\|Ga0127482_1127768	All Organisms → cellular organisms → Archaea	794	Open in IMG/M
3300010304\|Ga0134088_10657833	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	524	Open in IMG/M
3300010325\|Ga0134064_10049095	All Organisms → cellular organisms → Archaea	1290	Open in IMG/M
3300010358\|Ga0126370_10073161	All Organisms → cellular organisms → Archaea	2274	Open in IMG/M
3300011270\|Ga0137391_10489013	All Organisms → cellular organisms → Archaea	1043	Open in IMG/M
3300012096\|Ga0137389_11589471	All Organisms → cellular organisms → Archaea	550	Open in IMG/M
3300012202\|Ga0137363_11701475	All Organisms → cellular organisms → Archaea	523	Open in IMG/M
3300012203\|Ga0137399_10698554	All Organisms → cellular organisms → Archaea	854	Open in IMG/M
3300012205\|Ga0137362_10706620	All Organisms → cellular organisms → Archaea	866	Open in IMG/M
3300012206\|Ga0137380_10008933	All Organisms → cellular organisms → Archaea	9060	Open in IMG/M
3300012206\|Ga0137380_10011609	All Organisms → cellular organisms → Archaea	8026	Open in IMG/M
3300012206\|Ga0137380_10130410	All Organisms → cellular organisms → Archaea	2295	Open in IMG/M
3300012206\|Ga0137380_10200321	All Organisms → cellular organisms → Archaea	1811	Open in IMG/M
3300012206\|Ga0137380_11000278	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	715	Open in IMG/M
3300012206\|Ga0137380_11568262	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300012206\|Ga0137380_11643770	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300012207\|Ga0137381_10008632	All Organisms → cellular organisms → Archaea	7701	Open in IMG/M
3300012207\|Ga0137381_10239580	All Organisms → cellular organisms → Archaea	1576	Open in IMG/M
3300012209\|Ga0137379_10425684	All Organisms → cellular organisms → Archaea	1237	Open in IMG/M
3300012349\|Ga0137387_10161481	All Organisms → cellular organisms → Archaea	1600	Open in IMG/M
3300012351\|Ga0137386_10795842	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	679	Open in IMG/M
3300012356\|Ga0137371_10897778	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300012357\|Ga0137384_10216988	All Organisms → cellular organisms → Archaea	1599	Open in IMG/M
3300012359\|Ga0137385_10237696	All Organisms → cellular organisms → Archaea	1581	Open in IMG/M
3300012359\|Ga0137385_10394086	All Organisms → cellular organisms → Archaea	1181	Open in IMG/M
3300012359\|Ga0137385_11413811	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300012359\|Ga0137385_11417583	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	558	Open in IMG/M
3300012359\|Ga0137385_11447362	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300012362\|Ga0137361_10720622	All Organisms → cellular organisms → Archaea	910	Open in IMG/M
3300012363\|Ga0137390_11395287	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	645	Open in IMG/M
3300012386\|Ga0134046_1178151	All Organisms → cellular organisms → Archaea	797	Open in IMG/M
3300012398\|Ga0134051_1182250	All Organisms → cellular organisms → Archaea	1192	Open in IMG/M
3300012403\|Ga0134049_1221759	All Organisms → cellular organisms → Archaea	1042	Open in IMG/M
3300012917\|Ga0137395_10741006	All Organisms → cellular organisms → Archaea	711	Open in IMG/M
3300012918\|Ga0137396_10265975	All Organisms → cellular organisms → Archaea	1266	Open in IMG/M
3300014154\|Ga0134075_10509518	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300015245\|Ga0137409_11422154	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300017656\|Ga0134112_10011538	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2926	Open in IMG/M
3300017656\|Ga0134112_10364074	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	591	Open in IMG/M
3300017659\|Ga0134083_10238942	All Organisms → cellular organisms → Archaea	758	Open in IMG/M
3300017934\|Ga0187803_10086511	All Organisms → cellular organisms → Archaea	1231	Open in IMG/M
3300018431\|Ga0066655_10434149	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	867	Open in IMG/M
3300018468\|Ga0066662_10529627	All Organisms → cellular organisms → Archaea	1082	Open in IMG/M
3300018468\|Ga0066662_11672087	All Organisms → cellular organisms → Archaea	665	Open in IMG/M
3300021046\|Ga0215015_10727311	All Organisms → cellular organisms → Archaea	978	Open in IMG/M
3300025174\|Ga0209324_10065804	All Organisms → cellular organisms → Archaea	2493	Open in IMG/M
3300025313\|Ga0209431_10116795	All Organisms → cellular organisms → Archaea	2105	Open in IMG/M
3300025322\|Ga0209641_10608870	All Organisms → cellular organisms → Archaea	759	Open in IMG/M
3300026295\|Ga0209234_1034574	All Organisms → cellular organisms → Archaea	1923	Open in IMG/M
3300026296\|Ga0209235_1207915	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300026298\|Ga0209236_1034283	All Organisms → cellular organisms → Archaea	2680	Open in IMG/M
3300026298\|Ga0209236_1068818	All Organisms → cellular organisms → Archaea	1685	Open in IMG/M
3300026310\|Ga0209239_1226268	All Organisms → cellular organisms → Archaea	653	Open in IMG/M
3300026313\|Ga0209761_1167707	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1016	Open in IMG/M
3300026316\|Ga0209155_1168837	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	721	Open in IMG/M
3300026317\|Ga0209154_1135880	All Organisms → cellular organisms → Archaea	1032	Open in IMG/M
3300026318\|Ga0209471_1018160	All Organisms → cellular organisms → Archaea	3577	Open in IMG/M
3300026327\|Ga0209266_1258396	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300026331\|Ga0209267_1013881	All Organisms → cellular organisms → Archaea	4244	Open in IMG/M
3300026331\|Ga0209267_1047002	All Organisms → cellular organisms → Archaea	1962	Open in IMG/M
3300026332\|Ga0209803_1039901	All Organisms → cellular organisms → Archaea	2144	Open in IMG/M
3300026332\|Ga0209803_1254236	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300026333\|Ga0209158_1028478	All Organisms → cellular organisms → Archaea	2436	Open in IMG/M
3300026335\|Ga0209804_1269586	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	604	Open in IMG/M
3300026499\|Ga0257181_1020914	All Organisms → cellular organisms → Archaea	972	Open in IMG/M
3300026499\|Ga0257181_1030614	All Organisms → cellular organisms → Archaea	842	Open in IMG/M
3300026524\|Ga0209690_1138363	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	921	Open in IMG/M
3300026530\|Ga0209807_1311804	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	533	Open in IMG/M
3300026537\|Ga0209157_1383525	All Organisms → cellular organisms → Archaea	507	Open in IMG/M
3300026542\|Ga0209805_1155163	All Organisms → cellular organisms → Archaea	1047	Open in IMG/M
3300026542\|Ga0209805_1363112	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300026552\|Ga0209577_10053182	All Organisms → cellular organisms → Archaea	3411	Open in IMG/M
3300027748\|Ga0209689_1076584	All Organisms → cellular organisms → Archaea	1783	Open in IMG/M
3300027846\|Ga0209180_10324124	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	881	Open in IMG/M
3300027862\|Ga0209701_10431322	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	729	Open in IMG/M
3300027882\|Ga0209590_10586764	All Organisms → cellular organisms → Archaea	717	Open in IMG/M
3300027882\|Ga0209590_10764168	All Organisms → cellular organisms → Archaea	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.22%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.22%
Freshwater	Environmental → Aquatic → Freshwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.75%
Loam	Environmental → Terrestrial → Soil → Loam	5.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	21.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10176791	3300002557	Grasslands Soil	RKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
JGI25385J37094_100253851	3300002558	Grasslands Soil	RKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
JGI25385J37094_100983671	3300002558	Grasslands Soil	QPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
JGI25385J37094_102062542	3300002558	Grasslands Soil	KLDALRAAKRPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
JGI25385J37094_102198731	3300002558	Grasslands Soil	EVFSLLGGLLLLQGFLDFSIFRAFLATLNNFALIEIGMVLVAFAATVHIYRVSSQVK*
JGI25384J37096_101187592	3300002561	Grasslands Soil	PYFLSKGEVYALLGGLLLLQAFLDVAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
JGI25382J37095_101285241	3300002562	Grasslands Soil	IPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
JGI25382J43887_100251325	3300002908	Grasslands Soil	ALRAAKRPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
JGI25382J43887_100778701	3300002908	Grasslands Soil	PYRKAQPYLLTKSEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
JGI25382J43887_100812971	3300002908	Grasslands Soil	KPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
JGI25382J43887_101985773	3300002908	Grasslands Soil	WRRAKIDALRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIANLNNFVLLEIGMVLVAFAAAVHIYRISNQAK*
JGI25382J43887_103241572	3300002908	Grasslands Soil	LLNRGEVFSMMGGLLLLQAFLDVAIFRAVLAQLNNFVLIEIGMVLIAFAATVHIYRVSSSKK*
JGI25382J43887_104085711	3300002908	Grasslands Soil	IPYRKVNPYFLSKGEVYSLLGGLLLLQAFLDVAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
JGI25390J43892_100485113	3300002911	Grasslands Soil	KKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
JGI25386J43895_101747512	3300002912	Grasslands Soil	DALRAAKKPIPYRKAQPYLLTKSEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
Ga0066672_104027101	3300005167	Soil	EVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0066672_105521582	3300005167	Soil	LTKGEVYALLGGLLVLQAFLDVAIFRAFLDTLNNFALFEIGMVLVAFAATVHIYRVGAQVK*
Ga0066677_102096643	3300005171	Soil	KVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066680_102985991	3300005174	Soil	GGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066680_104399522	3300005174	Soil	KKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVR*
Ga0066673_100099865	3300005175	Soil	LRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQSK*
Ga0066679_103594593	3300005176	Soil	GGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSIQVK*
Ga0066690_109155321	3300005177	Soil	QPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSKAK*
Ga0066685_110943352	3300005180	Soil	EVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSKAK*
Ga0066689_100811104	3300005447	Soil	RAAKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0070707_1018637901	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RGKIDALRAARKPVPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0070697_1004952302	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LSKGEVYSLLGGLLVLQGFLDVAVFRALLDNLSNFVLLEIGMVLVAFAAAVHIYRVASQTK*
Ga0066697_107495211	3300005540	Soil	KGEVYALLGGLLLLQAFLDVAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
Ga0066692_104247302	3300005555	Soil	PIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066692_105230331	3300005555	Soil	LQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAR*
Ga0066707_103994652	3300005556	Soil	RKVAPYILSKSEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAATVHIYRVTSQAK*
Ga0066704_105474252	3300005557	Soil	KKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066699_103555181	3300005561	Soil	PIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFIDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066691_103825803	3300005586	Soil	RRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0066653_102953201	3300006791	Soil	KGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0066658_108333671	3300006794	Soil	LRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0066659_100318091	3300006797	Soil	KLDALRAAKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFIDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0099793_101014231	3300007258	Vadose Zone Soil	NPYFLSKGEVYSLLGGLLLLQAFLDVAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0099793_105266771	3300007258	Vadose Zone Soil	MFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0066710_1007512473	3300009012	Grasslands Soil	ARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVANLNNFVLLEIGMVLVAFAAAVHIYRISSQAR
Ga0099829_113312622	3300009038	Vadose Zone Soil	GGLVLLQAFLDLAIFRAFLDTLNNFALLEIGMVFVAFAATVHIYRVSVQVKY*
Ga0099830_101819421	3300009088	Vadose Zone Soil	VDLPLRQEVGVHLGKVNPYFLSKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0099830_109296832	3300009088	Vadose Zone Soil	PFRKVQPYLLTKGEVYSMMGGLLLLQGFLDAAIFRAAVAQLNNFVLVEIGMVLVAFAATVHIYRVSSKAK*
Ga0099828_102159731	3300009089	Vadose Zone Soil	RLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVANLNNFVLLEIGMVLIAFAAAVHIYRISNQAK*
Ga0099828_116264242	3300009089	Vadose Zone Soil	KIDALRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVANLNNFVLIEIGMVLVALAAAVHIYRISNQAK*
Ga0099828_118122561	3300009089	Vadose Zone Soil	KPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVANLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0099827_111183372	3300009090	Vadose Zone Soil	SKIDQLRAARKPLPYRKLQPYILSKSEVYSLLGGLLVLQGFLDIAVFRALLDNLNNFALLEIGMVLVAFAATVHIYRVASQTK*
Ga0066709_1013266941	3300009137	Grasslands Soil	GGLLLLQAFLNFSIFKAFISSLQNYALLEIGMVFIAFAATVHIYRVSSQLK*
Ga0066709_1031163782	3300009137	Grasslands Soil	RKPIPFRRLQPYMFSKSEVYSLLGGLLLLQVFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0066709_1035248582	3300009137	Grasslands Soil	LTKREVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0127494_11385881	3300010107	Grasslands Soil	PIPIRRVPPYLLNRGEVFSMMGGLLLLQAFLDVAIFRAVLAQLNNFVLIEIGMVLIAFAATVHIYRVSSSKK*
Ga0127482_11277682	3300010126	Grasslands Soil	YILSKGEIYSLLGGLLLLQAFLDFSIFRAFLFSLQNFALLEIGMVFIAFAATVHIYRVSTHLK*
Ga0134088_106578332	3300010304	Grasslands Soil	SKSEVYSLLGGLLLLQAFLEVSIFQALLENLNNFVLLEIGMVLVAFAAAVHIYRTSSQAK
Ga0134064_100490951	3300010325	Grasslands Soil	KKPLPYRRVQPYLLSRGEVFSLLGGLLLLQGFLDFSIFRAFLATLNNFALIEIGMVLVAFAATVHIYRVSSQVK*
Ga0126370_100731611	3300010358	Tropical Forest Soil	LRANRQPIPIRRVPPYMLNRGEVFSLMGGLLLLQAFLDMAIFRAVLAQLNNFVLVEIGMVLIAFAATVHIYRVSSKAK*
Ga0137391_104890131	3300011270	Vadose Zone Soil	MFSKTEVYSLLGGLLLLQAFLDVSIFRALIDNLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0137389_115894711	3300012096	Vadose Zone Soil	LLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
Ga0137363_117014752	3300012202	Vadose Zone Soil	RAKIDALRAARKPIPYRKLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0137399_106985541	3300012203	Vadose Zone Soil	KKPIPYRKVQPYFLSKGEAYSLLGGLVLLQAFLDLAIFRAFLDTLNNFALLEIGMVFVAFAATVHIYRVSVQVKY*
Ga0137362_107066202	3300012205	Vadose Zone Soil	LSKGEVYALLGGLLLLQTNIDEAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0137380_1000893310	3300012206	Vadose Zone Soil	IPFRRLQPYIMSKGEVYSLVGGLLVLQGFLDVAIFRALLDKLNNFVLLEIGMVLVAFAATVHIYRVANQSK*
Ga0137380_100116099	3300012206	Vadose Zone Soil	IPFRRLQPYIMSKGEVYSLVGGLLVLQGFLDVAIFRALLDRLNNFVLLEIGMVLVAFAATVHIYRVANQSK*
Ga0137380_101304105	3300012206	Vadose Zone Soil	RAARKPLPYRKVAPYILSKSEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAATVHIYRVTSQAK*
Ga0137380_102003214	3300012206	Vadose Zone Soil	AKLDALRAAKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0137380_110002782	3300012206	Vadose Zone Soil	PYILSKGEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLIAFAAAAHIYRVASQTK*
Ga0137380_115682622	3300012206	Vadose Zone Soil	RAKVDALRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0137380_116437701	3300012206	Vadose Zone Soil	LDALRAAKKPIPYRKVQPYFLSKGEVYSLLGGLVLLQAFLDLAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0137381_100086321	3300012207	Vadose Zone Soil	ARKPIPFRRLQPYIMSKGEVYSLVGGLLVLQGFLDVAIFRGLLDKLNNFVLLEIGMVLVAFAATVHIYRVANQSK*
Ga0137381_102395801	3300012207	Vadose Zone Soil	ARKPIPFRRLQPYIMSKGEVYSLVGGLLVLQGFLDVAIFRALLDRLNNFVLLEIGMVLVAFAATVHIYRVANQSK*
Ga0137379_104256842	3300012209	Vadose Zone Soil	AAKKPLPYRRVQPYLLSRGEVFSLLGGLLLLQGFLDFSIFRAFLATLNNFALIEIGMVLVAFAATVHIYRVSSQVK*
Ga0137387_101614813	3300012349	Vadose Zone Soil	YALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0137386_107958422	3300012351	Vadose Zone Soil	YSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAAAAHIYRVASQTR*
Ga0137371_108977782	3300012356	Vadose Zone Soil	QPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0137384_102169884	3300012357	Vadose Zone Soil	AKIDELRAARKPLPYRKVAPYILSKSEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAATVHIYRVTSQAK*
Ga0137385_102376961	3300012359	Vadose Zone Soil	AKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK*
Ga0137385_103940863	3300012359	Vadose Zone Soil	PFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0137385_114138111	3300012359	Vadose Zone Soil	RWRKAKIAQLRANRQPIPFRRVQPYLLTRGEVYSMMGGLLLLQGFLDVAIFRAAIAQLNNFVLVEIGMVLIAFAATVHIYRVSSKAK*
Ga0137385_114175831	3300012359	Vadose Zone Soil	RKPMPFRKLQPYILSKGEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAAAAHIYRVASQTR*
Ga0137385_114473622	3300012359	Vadose Zone Soil	VQPYLLNKSEVYSLLGGLLLLQAFLDFSIFRAFLDSLQNFALLEIGMVFVAFAATAHIYRVSSQAK*
Ga0137361_107206221	3300012362	Vadose Zone Soil	KKPIPYRKVNPYFLSKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0137390_113952871	3300012363	Vadose Zone Soil	IDALRAARKPIPYRKLQPYMFSKTEVYSLLGGLLLLQAFLDVSIFRALIDNLNNFVLLEIGMVLVAFAAAVHIYRISSQAK*
Ga0134046_11781511	3300012386	Grasslands Soil	KGEIYSLLGGLLLLQAFLDFSIFRAFLFSLQNFALLEIGMVFIAFAATVHIYRVSAQVK*
Ga0134051_11822501	3300012398	Grasslands Soil	ILSKGEIYSLLGGLLLLQAFLDFSIFRAFLFSLQNFALLEIGMVFIAFAATVHIYRVSTHLK*
Ga0134049_12217591	3300012403	Grasslands Soil	KGEVYSLLGGLLLLQAFLDFSIFRAFLSSLQNFAILEIGMVFIAFAATVHIYRVSTHLK*
Ga0137395_107410062	3300012917	Vadose Zone Soil	KLDALRAAKKPIPYRKVNPYFLSKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK*
Ga0137396_102659751	3300012918	Vadose Zone Soil	KVQPYFLSKGEVYSLLGGLLLLQAFLDLAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK*
Ga0134075_105095182	3300014154	Grasslands Soil	SKGEVYSLLGGLLLLQAFLDVAVFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVKY*
Ga0137409_114221542	3300015245	Vadose Zone Soil	RAAKKPIPYRKVQPYFLSKGEVYSLLGGLVLFQAFLDLAIFRAFLDTLNNFALLEIGMVFVAFAATVHIYRVSVQVKY*
Ga0134112_100115384	3300017656	Grasslands Soil	LPKGEVYSLLGGLLLLQAFLNFSIFKAFISSLQNYALLEIGMVFIAFAATVHIYRVSSQL
Ga0134112_103640741	3300017656	Grasslands Soil	QPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQSK
Ga0134083_102389422	3300017659	Grasslands Soil	YLLTKGEVYALLGGLLLLQAFLDMAIFRAFLDTHNNFALLEIGMVFVAFAATVHIYRVSVQVKY
Ga0187803_100865111	3300017934	Freshwater Sediment	SKSEVYSLLGGLLLLQAFLDFSIFRAFVLSLQNYALLEIGMVFIAFAATVHIYRVSSQAK
Ga0066655_104341491	3300018431	Grasslands Soil	LLGGLLLLQAFLDVSIFRALVENLNNFVVLEIGMVLVAFAAAVHIYRISSQAK
Ga0066662_105296271	3300018468	Grasslands Soil	PIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK
Ga0066662_116720871	3300018468	Grasslands Soil	KKPIPYRKAQPYLLTKSEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAANVHIYRVSVQVK
Ga0215015_107273112	3300021046	Soil	ALRAAKKPVPYRKVNPYFLSKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Ga0209324_100658041	3300025174	Soil	EQLRANRQPIPIRKVKPYLFSKGEVYSMLGGLLVLQAFLDLAIFRAVLSELNNFVLIEIGLVLVAFAATAHIYRVTSQAK
Ga0209431_101167954	3300025313	Soil	QPIPIRKVKPYLFSKGEVYSMLGGLLVLQAFLDLAIFRAVLSELNNFVLIEIGLVLVAFAATAHIYRVTSQAK
Ga0209641_106088702	3300025322	Soil	RRAKVEQLRANRQPIPIRKVKPYLFSKGEVYSMLGGLLVLQAFLDLAIFRAVLSELNNFVLIEIGLVLVAFAATAHIYRVTSQAK
Ga0209234_10345744	3300026295	Grasslands Soil	GEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK
Ga0209235_12079151	3300026296	Grasslands Soil	AKKPIPYRKVQPYLLNKSEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Ga0209236_10342831	3300026298	Grasslands Soil	RKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK
Ga0209236_10688181	3300026298	Grasslands Soil	RKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALIENLNNFVLLEIGMVLVAFAAAVHIYRISSQAR
Ga0209239_12262681	3300026310	Grasslands Soil	RAAKKAIPYRKVPPYILSKGEVYSLLGGLLLLQAFLDFSIFRAFLSSLQNFAILEIGMVFIAFAATVHIYRVSAQVK
Ga0209761_11677073	3300026313	Grasslands Soil	RKPMPFRKLQPYILSKGEVYSLLGGLLVLQGFLDVAVFRALLDNLNNFALLEIGMVLVAFAAAAHIYRVASQTR
Ga0209155_11688371	3300026316	Soil	AARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQSK
Ga0209154_11358803	3300026317	Soil	KGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Ga0209471_10181601	3300026318	Soil	MLDALRAAKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVR
Ga0209266_12583961	3300026327	Soil	LGGLLLLQAFLDLAIFRAFLETLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Ga0209267_10138815	3300026331	Soil	FRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQAK
Ga0209267_10470021	3300026331	Soil	LGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSAQVK
Ga0209803_10399011	3300026332	Soil	LDALRAAKKPIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVR
Ga0209803_12542362	3300026332	Soil	PLPYRRVQPYLLSRGEVFSLLGGLLLLQGFLDFSIFRAFLATLNNFALIEIGMVLVAFAATVHIYRVSSQVK
Ga0209158_10284785	3300026333	Soil	RKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK
Ga0209804_12695862	3300026335	Soil	RAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSKAK
Ga0257181_10209143	3300026499	Soil	KVNPYFLSKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVSVQVK
Ga0257181_10306142	3300026499	Soil	EVYSLLGGLVLLQAFLDLAIFRAFLDTLNNFALLEIGMVFVAFAATVHIYRVSVQVKY
Ga0209690_11383631	3300026524	Soil	RAARKPIPFRRLQPYIMSKGEVYSLVGGLLVLQGFLDVAIFRALLDKLNNFVLLEIGMVLVAFAATVHIYRVANQSK
Ga0209807_13118041	3300026530	Soil	LRAARKPIPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQSK
Ga0209157_13835251	3300026537	Soil	ALRAAKKPVPYKRVPPYILSKSEVFSLLTGLLILQGFLDFSIFRSLIDSLQNFALLEIGMVFVAFAATVHIYRVANKIK
Ga0209805_11551631	3300026542	Soil	PIPYRKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFIDTLNNFALLEIGMVLVAFAATVHIYRVGAQVK
Ga0209805_13631122	3300026542	Soil	RRVPPYILSKSEVFSLLTGLLILQGFLDFSIFRSLIESLQNFALLEIGMVFVAFAATVHIYRVANKIK
Ga0209577_100531826	3300026552	Soil	IPFRRLQPYMFSKSEVYSLLGGLLLLQAFLDVSIFRALVENLNNFVLLEIGMVLVAFAAAVHIYRISSQSK
Ga0209689_10765841	3300027748	Soil	RKVQPYLLTKGEVYALLGGLLLLQAFLDVAIFRAFLDTLNNFALLEIGMVLVAFAATVHIYRVGAQVR
Ga0209180_103241242	3300027846	Vadose Zone Soil	MFSKTEVYSLLGGLLLLQAFLDVSIFRALIDNLNNFVLLEIGMVLVAFAAAVHIYRISSQAK
Ga0209701_104313222	3300027862	Vadose Zone Soil	SLLGGLLLLQAFLDVSIFRALIDNLNNFVLLEIGMVLVAFAAAVHIYRISSQAK
Ga0209590_105867641	3300027882	Vadose Zone Soil	LDALRAAKKPIPYRKVQPYFLSKGEAYSLLGGLVLLQAFLDLAIFRAFLDTLNNFALLEIGMVFVAFAATVHIYRVSVQVKY
Ga0209590_107641682	3300027882	Vadose Zone Soil	LLGGLLLLQAFLDAAIFRAFLDALNNFALLEIGMVLVAFAATVHIYRVSVQVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences