Metagenome / Metatranscriptome Family F064574

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064574
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	51 residues
Representative Sequence	FLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA
Number of Associated Samples	111
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.57 %
% of genes near scaffold ends (potentially truncated)	81.25 %
% of genes from short scaffolds (< 2000 bps)	73.44 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.062 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.344 % of family members)
Environment Ontology (ENVO)	Unclassified (42.969 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.13% β-sheet: 0.00% Coil/Unstructured: 44.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00275	EPSP_synthase	82.03
PF02224	Cytidylate_kin	5.47
PF02153	PDH_N	4.69
PF00069	Pkinase	3.12
PF08241	Methyltransf_11	0.78
PF00575	S1	0.78
PF01039	Carboxyl_trans	0.78
PF00572	Ribosomal_L13	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	12.50
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	5.47
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	4.69
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	0.78
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.78
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.78
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	58.59 %
Unclassified	root	N/A	10.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	58.59 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	42.97 %
Unclassified	root	N/A	10.94 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	42.97 %
Unclassified	root	N/A	10.94 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.12 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	42.97 %
Unclassified	root	N/A	10.94 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	42.97 %
Unclassified	root	N/A	10.94 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.34 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	42.97 %
Unclassified	root	N/A	10.94 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.34 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10049877	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300002908\|JGI25382J43887_10031647	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300002912\|JGI25386J43895_10018167	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300005166\|Ga0066674_10322186	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005175\|Ga0066673_10238229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1050	Open in IMG/M
3300005175\|Ga0066673_10776907	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005176\|Ga0066679_11051473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300005179\|Ga0066684_10006436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5357	Open in IMG/M
3300005180\|Ga0066685_10041899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2905	Open in IMG/M
3300005187\|Ga0066675_11327832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	529	Open in IMG/M
3300005440\|Ga0070705_100742810	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005444\|Ga0070694_100982572	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300005536\|Ga0070697_100735555	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005545\|Ga0070695_100578055	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005555\|Ga0066692_10537141	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005558\|Ga0066698_10000736	All Organisms → cellular organisms → Bacteria	13051	Open in IMG/M
3300005558\|Ga0066698_10058372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2457	Open in IMG/M
3300005559\|Ga0066700_10371878	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005561\|Ga0066699_11090731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300005575\|Ga0066702_10549612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	698	Open in IMG/M
3300005586\|Ga0066691_10201560	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005598\|Ga0066706_10355015	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300006031\|Ga0066651_10583961	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300006034\|Ga0066656_10844281	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300006794\|Ga0066658_10123085	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300006797\|Ga0066659_10623608	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006806\|Ga0079220_10876001	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300007076\|Ga0075435_100315242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1338	Open in IMG/M
3300009012\|Ga0066710_101699278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300009038\|Ga0099829_11235645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300009090\|Ga0099827_10732180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	855	Open in IMG/M
3300009090\|Ga0099827_10917068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300009094\|Ga0111539_10221806	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300009100\|Ga0075418_12349025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300009610\|Ga0105340_1151268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	957	Open in IMG/M
3300009804\|Ga0105063_1011947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	936	Open in IMG/M
3300010301\|Ga0134070_10352595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	571	Open in IMG/M
3300010303\|Ga0134082_10120526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1048	Open in IMG/M
3300010304\|Ga0134088_10066330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1672	Open in IMG/M
3300010326\|Ga0134065_10007669	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300010329\|Ga0134111_10148777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	925	Open in IMG/M
3300010329\|Ga0134111_10263202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	711	Open in IMG/M
3300010329\|Ga0134111_10464493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300010333\|Ga0134080_10382961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	647	Open in IMG/M
3300010337\|Ga0134062_10229402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300010403\|Ga0134123_10203594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1687	Open in IMG/M
3300011270\|Ga0137391_10085917	All Organisms → cellular organisms → Bacteria	2718	Open in IMG/M
3300012198\|Ga0137364_10893608	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300012203\|Ga0137399_10174938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1730	Open in IMG/M
3300012207\|Ga0137381_11490274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300012210\|Ga0137378_10699186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	925	Open in IMG/M
3300012210\|Ga0137378_11507907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300012211\|Ga0137377_10564371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1076	Open in IMG/M
3300012285\|Ga0137370_10292711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	971	Open in IMG/M
3300012285\|Ga0137370_10704414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	627	Open in IMG/M
3300012349\|Ga0137387_10585709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	809	Open in IMG/M
3300012350\|Ga0137372_10051536	All Organisms → cellular organisms → Bacteria	3634	Open in IMG/M
3300012354\|Ga0137366_10050375	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M
3300012354\|Ga0137366_10468015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	912	Open in IMG/M
3300012354\|Ga0137366_10861082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300012355\|Ga0137369_10066587	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300012357\|Ga0137384_10259354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1449	Open in IMG/M
3300012357\|Ga0137384_11571623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300012359\|Ga0137385_10483241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1049	Open in IMG/M
3300012360\|Ga0137375_10546924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300012360\|Ga0137375_10711655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300012922\|Ga0137394_10282570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1419	Open in IMG/M
3300012924\|Ga0137413_10272104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1172	Open in IMG/M
3300012925\|Ga0137419_10350075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1142	Open in IMG/M
3300012930\|Ga0137407_11840341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300012972\|Ga0134077_10444485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300012976\|Ga0134076_10043229	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300012977\|Ga0134087_10466527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300014154\|Ga0134075_10512381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300014154\|Ga0134075_10567535	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	513	Open in IMG/M
3300015051\|Ga0137414_1218327	All Organisms → cellular organisms → Bacteria	4021	Open in IMG/M
3300015241\|Ga0137418_10404055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1114	Open in IMG/M
3300015357\|Ga0134072_10376079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300017659\|Ga0134083_10572315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300018054\|Ga0184621_10243039	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	643	Open in IMG/M
3300018071\|Ga0184618_10207338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	821	Open in IMG/M
3300018071\|Ga0184618_10513029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300018078\|Ga0184612_10313880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300018084\|Ga0184629_10200228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1031	Open in IMG/M
3300018468\|Ga0066662_10044953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2765	Open in IMG/M
3300019789\|Ga0137408_1473920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1601	Open in IMG/M
3300020004\|Ga0193755_1043438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1473	Open in IMG/M
3300022195\|Ga0222625_1076525	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300024290\|Ga0247667_1052055	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300025289\|Ga0209002_10624463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025885\|Ga0207653_10160955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300025922\|Ga0207646_10140068	Not Available	2178	Open in IMG/M
3300026298\|Ga0209236_1020367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3713	Open in IMG/M
3300026315\|Ga0209686_1179387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300026316\|Ga0209155_1110215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300026320\|Ga0209131_1157924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1135	Open in IMG/M
3300026324\|Ga0209470_1201759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	841	Open in IMG/M
3300026327\|Ga0209266_1014129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4545	Open in IMG/M
3300026331\|Ga0209267_1100774	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1229	Open in IMG/M
3300026523\|Ga0209808_1060380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1692	Open in IMG/M
3300026524\|Ga0209690_1015857	All Organisms → cellular organisms → Bacteria	3902	Open in IMG/M
3300026524\|Ga0209690_1092820	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300026528\|Ga0209378_1287147	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026530\|Ga0209807_1026187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2821	Open in IMG/M
3300026542\|Ga0209805_1001163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	16173	Open in IMG/M
3300026548\|Ga0209161_10102128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1727	Open in IMG/M
3300026548\|Ga0209161_10505252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300026555\|Ga0179593_1049375	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300027383\|Ga0209213_1078311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300027725\|Ga0209178_1063002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1201	Open in IMG/M
3300028828\|Ga0307312_10100768	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300028884\|Ga0307308_10250132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300030620\|Ga0302046_11128876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300031114\|Ga0308187_10181723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300032770\|Ga0335085_10496196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1394	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.09%
Host-Associated	Host-Associated	3.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.06%
Aquatic	Environmental → Aquatic	7.03%
Plants	Host-Associated → Plants	3.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.06%
Sediment	Environmental → Aquatic → Sediment	5.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.91%
Freshwater	Environmental → Aquatic → Freshwater	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100498771	3300002561	Grasslands Soil	SEPVLWTEILLMNRDELLPALRSLXEPXGELQRALEXGDAAAVTAWLGRAAEWRGRLET*
JGI25382J43887_100316473	3300002908	Grasslands Soil	MNRDELLPALRSLEEPLGELQRALEVGDAAAVTAWLGRAAEWRGRLEP*
JGI25386J43895_100181673	3300002912	Grasslands Soil	ILLMNRDELLPTLRSLEEPLGELQRALEVGDAVAVRAWLGRAAEWRGRLET*
Ga0066674_103221862	3300005166	Soil	WTEILLMNRDEILPALRALEESLGTVERALEVGDATALTAWLTRAAEWRRRIGP*
Ga0066673_102382291	3300005175	Soil	EIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066673_107769071	3300005175	Soil	EIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLARAADWRRSLDP*
Ga0066679_110514731	3300005176	Soil	LPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066684_100064361	3300005179	Soil	EIFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066685_100418994	3300005180	Soil	TEILLLNRDVLLPALRALEEPLGEVERALEAGDPIALRAWLTRAADWRRGLDA*
Ga0066675_113278321	3300005187	Soil	ALWTEIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA*
Ga0070705_1007428101	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	QLWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRALER*
Ga0070694_1009825721	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ*
Ga0070697_1007355552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRALER*
Ga0070695_1005780552	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ*
Ga0066661_106684752	3300005554	Soil	RALEEPLGEVERALEAGDAVALRAWLTRAADWRRGLDA*
Ga0066692_105371412	3300005555	Soil	LWTEILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGS*
Ga0066698_1000073614	3300005558	Soil	FLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA*
Ga0066698_100583724	3300005558	Soil	LNRDVLLPALRALEEPLGEVERALEAGDPIALRAWLTRAADWRRGLDA*
Ga0066700_103718782	3300005559	Soil	MNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0066699_110907311	3300005561	Soil	LLPALRALEEPLGQLERALEAGDAAALTTWLTRAADWRRRLDA*
Ga0066702_105496121	3300005575	Soil	FLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0066691_102015601	3300005586	Soil	RDELLPALRALEEPLGGLERALESGDATSLHALLARAGEWRRKLDG*
Ga0066706_103550151	3300005598	Soil	EIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRGWLTRAADWRRRLDA*
Ga0066651_105839612	3300006031	Soil	EIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066656_108442812	3300006034	Soil	IFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA*
Ga0066658_101230852	3300006794	Soil	MNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGT*
Ga0066659_106236081	3300006797	Soil	ASEPALWTEILLMNRDELLPALRSLEEPLGELQRALEVGDAAAVTAWLGRAAEWRARLDT
Ga0066660_105243832	3300006800	Soil	ALRALEEPLGQLERALEAGDAAALTSWLTQAADWRRRLDP*
Ga0079220_108760012	3300006806	Agricultural Soil	EILLMNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAAHWRRQAEA*
Ga0075421_1011789032	3300006845	Populus Rhizosphere	LRALEEPLGAVERALEAGDGAALAAWLTQAAEWRRAQS*
Ga0075425_1017787822	3300006854	Populus Rhizosphere	LEEPLGAVERALESGDGPALTAWLTQAADWRRRVEP*
Ga0075435_1003152422	3300007076	Populus Rhizosphere	QLWTEILLMNRDELLVALRALEESLGSVERALETGDARALLAWLTRAADWRRGVGQ*
Ga0066710_1016992781	3300009012	Grasslands Soil	ILLMNRDEILPALRALEESLGTVERALEVGDATALTAWLTRAAEWRRRIGP
Ga0099829_112356452	3300009038	Vadose Zone Soil	LLMNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAARWRRQAEA*
Ga0099827_107321801	3300009090	Vadose Zone Soil	SEPTLWTEILLMNRDELLPALRSLEEPLGELQRALEAGDAVAVRAWLGRGAEWRARLET*
Ga0099827_109170682	3300009090	Vadose Zone Soil	ALWTEIFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0111539_102218063	3300009094	Populus Rhizosphere	MNRDEILPALRALEESLGTVERALEVGDAAALTEWLTRAATWRQRLG*
Ga0075418_123490251	3300009100	Populus Rhizosphere	RDQVLPALRALEEPLGAVERALEAGDGPALTKWLTRAAEWRRRVEPEP*
Ga0105340_11512682	3300009610	Soil	WTEILLMNRDVLLPALRALEEPLGELAHALEQGDAPTVTAWLARGAEWRRTIGP*
Ga0105063_10119471	3300009804	Groundwater Sand	MNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRAASWRRRLGGQ*
Ga0134070_103525951	3300010301	Grasslands Soil	ALWTEILLMNRDEILPALRALEESLGTVERALEVGDASALSAWLARAAAWRRRIGGGGSGL*
Ga0134082_101205261	3300010303	Grasslands Soil	TEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0134088_100663301	3300010304	Grasslands Soil	TRLAASEPGLWTEILLMNRDVLLPALRALEEPLGELEHALECGDAGAVAAWLGRGAAWRRRIDA*
Ga0134065_100076694	3300010326	Grasslands Soil	WTEIFLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0134111_101487771	3300010329	Grasslands Soil	MNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTRAADWRRRVEP*
Ga0134111_102632021	3300010329	Grasslands Soil	ILLMNRDEILPALRVLEESLGTVERALEVGDAAALTDWLSRAAAWRRRVAP*
Ga0134111_104644931	3300010329	Grasslands Soil	ALWTEVFLMNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134080_103829611	3300010333	Grasslands Soil	ASEPVLWTEILLMNRDELLPALRSLEEPLGELQRALELGDAAAVTAWLGRAAEWRGRLEP
Ga0134062_102294022	3300010337	Grasslands Soil	MNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134123_102035943	3300010403	Terrestrial Soil	WTEILLMNRDEILPALRALEESLGTVERALETGDAAVLTDWLTRAAAWRRRLG*
Ga0137391_100859171	3300011270	Vadose Zone Soil	DELLPALRALEESLGTVEHALEVGDATALMAWLTRAATWRRRIGGS*
Ga0137364_108936082	3300012198	Vadose Zone Soil	ALWTEIFLMNRDELLPALRSLEEPLGELERALETGNAQAVTAWLSRAAQWRRQADA*
Ga0137399_101749383	3300012203	Vadose Zone Soil	EPALWTEILLMNRDELLPALRSLEEPLGELQRALETGDAVAVRAWLGRAAEWRGRFET*
Ga0137381_114902742	3300012207	Vadose Zone Soil	WAEIFLMNRDELLAALRSLEEPLGELERALESGDAVGLGGWLARGADWRRRLRT*
Ga0137378_101118901	3300012210	Vadose Zone Soil	PALRALEEPLGALERALEAGDAKRVTEWLATAAAWRRRVEA*
Ga0137378_106991862	3300012210	Vadose Zone Soil	WTEILLMNRDEILPALRALEESLGTVERALEVGDAATLTAWLTRAASWRRRIGSE*
Ga0137378_115079072	3300012210	Vadose Zone Soil	LLMNRDELLVALRALEESLGSVERALETGDARALTAWLTRASDWRRGIGP*
Ga0137377_105643712	3300012211	Vadose Zone Soil	FLMNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0137370_102927111	3300012285	Vadose Zone Soil	LLMNRDMLLPALRELEEPLGELERALECGDAPGVAAWLGRAAAWRRRIDA*
Ga0137370_107044141	3300012285	Vadose Zone Soil	LWTEIFLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA*
Ga0137387_105857092	3300012349	Vadose Zone Soil	MNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAATWRRRIGGS*
Ga0137372_100515364	3300012350	Vadose Zone Soil	EILLMNRDELLVALRALEESLGSVERALETGDARALTAWLTRASDWRRGVGP*
Ga0137372_103310772	3300012350	Vadose Zone Soil	PALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA*
Ga0137366_100503754	3300012354	Vadose Zone Soil	MNRDEILPALRALEESLGTVEHALEVGDATALSAWLARAAAWRRRIGGSGL*
Ga0137366_104680152	3300012354	Vadose Zone Soil	LWTEILLMNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRAASWRRRIGNQ*
Ga0137366_108610822	3300012354	Vadose Zone Soil	MNRDELLAALRSLEEPLGELERALESGDAVGLGGWLARGADWRRRLRT*
Ga0137369_100665874	3300012355	Vadose Zone Soil	WAEIFLMNRDEVLTALRALEQPLGELERALETGDAPALIAWLARAAEWRRRLDA*
Ga0137384_102593541	3300012357	Vadose Zone Soil	RDQVLPALRAFEEPLGEVERALEAGDAAALERWLASAAEWRRQAGP*
Ga0137384_115716231	3300012357	Vadose Zone Soil	RDEILPALRALEESLGTVEHALEVGDATALSAWLTRAAVWRRRIGGSGL*
Ga0137385_104832412	3300012359	Vadose Zone Soil	LWTEIFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0137375_105469242	3300012360	Vadose Zone Soil	GLWTEILLMNRDEILPAIRGFEESLGTVARALEVGDAAALTAWLTRVANWRRRIGGS*
Ga0137375_107116552	3300012360	Vadose Zone Soil	RDEVLPALRALEEPLGELERTLETGDAGGLAAWLGRASAWRRKVDG*
Ga0137390_103703882	3300012363	Vadose Zone Soil	ALRALEEPLGALERALEAGDAAAVRGWLARPSEWRRRAEM*
Ga0137396_103042292	3300012918	Vadose Zone Soil	LRALEEPLGEVERALEDGDPVALRAWLTRAADWRRGLDA*
Ga0137394_102825702	3300012922	Vadose Zone Soil	WTEIFLMNRDELLPALRALEEPLGELERALETGNARAVTAWLSRAAQWRRQADA*
Ga0137413_102721041	3300012924	Vadose Zone Soil	PGLWTEILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAANWRRRIGGS*
Ga0137419_103500751	3300012925	Vadose Zone Soil	EILLMNRDEILPALRALEESLGTVQRALEVGDAAALTAWLTRAAIWRRRIGSP*
Ga0137407_118403411	3300012930	Vadose Zone Soil	ILLMNRDEILPALRGLEESLGTVERALEVGDAAALTAWLTRAAKWRRRIGGS*
Ga0134077_104444852	3300012972	Grasslands Soil	LMNRDEILPALRALEESLGTVERALEVGDAAALTAWLTRASAWRRRLG*
Ga0134110_101547632	3300012975	Grasslands Soil	LRALEEPLGQLERALEAGDAAALTTWLTRAGDWRRRLDA*
Ga0134076_100432291	3300012976	Grasslands Soil	LWTEVFLMNRDELLPALRSLEEPLGELERALEAGDAVGLTAWLRRGAEWRRRLDT*
Ga0134087_104665272	3300012977	Grasslands Soil	LWTEIFLMNRDELLPALSSLEEPLGELERALETGNARAVTAWLRRAAQWRRQADA*
Ga0134075_105123812	3300014154	Grasslands Soil	EILLMNRDELLPALRGLEESLGSVERALEAGDAAALTAWLTRAATWRRRIGGA*
Ga0134075_105675351	3300014154	Grasslands Soil	VLLPALRALEEPLGEIERALEAGDATALKAWLATASDWRRGLDA*
Ga0137414_12183278	3300015051	Vadose Zone Soil	MNRDEILPVLRALEEPLGELERALETGNAPALTAWLSRAARWRRQAEA*
Ga0137418_104040551	3300015241	Vadose Zone Soil	VLVMNRREGAAGLGALEEPLGELERALETGNAPALTAWLSRAAQWRRQADA*
Ga0134072_103760791	3300015357	Grasslands Soil	IFLMNRDQLLPALRALEEPLGQLERALEAGDAAALTTWLTRAGDWRRRLDA*
Ga0134083_105723152	3300017659	Grasslands Soil	LLLNRDEVLPALRGLEEPLGELERALETGNATGVTAWLARAAEWRRRADA
Ga0184621_102430391	3300018054	Groundwater Sediment	TEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTGWLTKAAEWRRRVEP
Ga0184618_102073381	3300018071	Groundwater Sediment	GLWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLARAADWRRRVEP
Ga0184618_105130292	3300018071	Groundwater Sediment	LMNRDEVLPALRALEEPLGAVERALEAGDGPALTGWLTRAAEWRRRVGP
Ga0184635_102195521	3300018072	Groundwater Sediment	ALRALEEPLGAVERALEAGDGPALTGWLTKAAEWRRRVEP
Ga0184612_103138802	3300018078	Groundwater Sediment	EVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRIDP
Ga0184629_102002282	3300018084	Groundwater Sediment	LWTEILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTQAADWRRRVEP
Ga0066662_100449534	3300018468	Grasslands Soil	FLMNRDELLPALRSLEEPLGELERALEAGDAAGLTAWLRRGAEWRRRLDA
Ga0137408_14739203	3300019789	Vadose Zone Soil	IFLMNRDELLPALRSLEEPLGELERALETGNARAVTAWLSRAAQWRRQADA
Ga0193713_10901911	3300019882	Soil	LEEPLGAVERALEAGDGPALTAWLTQAADWRRRVDQ
Ga0193755_10434381	3300020004	Soil	LWTEILLMNRDELLVALRALDESLGSVERAIETGDARALMAWLTRAADWRRGVGP
Ga0210382_103265082	3300021080	Groundwater Sediment	RALEEPLGAVERALEAGDGPALTAWLARAADWRRRVEP
Ga0222625_10765252	3300022195	Groundwater Sediment	EILLMNRDEVLPALRALEEPLGAVERALEAGDGPALTAWLTVAADWRRRVDP
Ga0247667_10520552	3300024290	Soil	QLWTEILLLNRDEVLPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRRVEV
Ga0209002_106244631	3300025289	Soil	LLNRDEVLGALRALEEPLGELERALEAGDAGGVAVWLSRAAEWSCLPGCGTL
Ga0207653_101609552	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	ASDPELWTEILLMNRDEILPALRKLEESLGTVERALEVGDAAAFTAWLTRAAEWRRRIAP
Ga0207646_101400682	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LPALRALEEPLGALERALEAGDAKRVAEWLAAAAAWRRRVEA
Ga0209236_10203674	3300026298	Grasslands Soil	LNRDVLLPALRALEEPLGEVERALEAGDAVALRAWLTRAADWRRGLDA
Ga0209686_11793872	3300026315	Soil	TEIFLMNRDELLPALRSLEQPLGELEHALETGNAQAVTAWLSCAAQWRRQADA
Ga0209155_11102152	3300026316	Soil	LWTEIFLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209131_11579241	3300026320	Grasslands Soil	MNRDELLVALRALEESLGSVEHALETGDARALLAWLTRAADWRRGVGP
Ga0209470_12017591	3300026324	Soil	LLMNRDVLLPALRALEEPLGELEHALECGDAGAVAAWLGRGAAWRRRIDA
Ga0209266_10141295	3300026327	Soil	WTEILLMNRDEVLPALRLLEESLGTVERALEAGDAKALTAWLTRAAAWRRRIGP
Ga0209267_11007741	3300026331	Soil	MNRDQLLPALRALEEPLGQLERALEAGDAAALRSWLTRAADWRRRLDA
Ga0209808_10603803	3300026523	Soil	WTEIFLMNRDELLPALRSLEQPLGELERALETGNAQAVTAWLSCAAQWRRQADA
Ga0209690_10158572	3300026524	Soil	MNRDELLPALRSLEEPLGELERALEAGDAAGLAAWLRRGAEWRRRLDA
Ga0209690_10928202	3300026524	Soil	MNRDEILPALRVLEESLGTVERALEVGDAGALSAWLERAAAWRRRIGGSEA
Ga0209378_12871472	3300026528	Soil	MNRDELLPALRSLEAPLGELERALELGDAPALSAWLGSAAAWRRRLDP
Ga0209807_10261874	3300026530	Soil	ALWTEIFLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209805_100116318	3300026542	Soil	NRDQLLPALRALEEPLGQLERALEAGDATALTTWLTRAADWRRGLDA
Ga0209161_101021281	3300026548	Soil	LMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQADA
Ga0209161_105052522	3300026548	Soil	WSEILLLNRDEVLPALRGLEEPLGELERALETGNATGVTAWLTRAAEWRRRADA
Ga0209577_100012561	3300026552	Soil	PALRALEEPLGQLERALEAGDAAALTSWLTQAADWRRRLDP
Ga0179593_10493756	3300026555	Vadose Zone Soil	MNRDEILPVLRALEEPLGELERASRRGTPGPDRVAQPRARWRRQAEA
Ga0209213_10783111	3300027383	Forest Soil	FLMNRDELLPALRSLEEPLGELERALETGNAPAVTAWLSRAAQWRRQAGA
Ga0209178_10630021	3300027725	Agricultural Soil	DEVLPALRALEEPLGQIERALETGDARSLTAWLGQGAEWRRRIDA
Ga0307312_101007683	3300028828	Soil	NRDEILPALRGLGESLGTVERALEAGDAPALTAWLTRAATWRRRIGGS
Ga0307308_102501321	3300028884	Soil	LWTEILLMNRDEILPVLRGLEESLGTVERALEVGDAAALNAWLTRAATWRRRLG
Ga0302046_111288762	3300030620	Soil	PALWTEILLMNRDELLPALRALEESLGTAERAIEMGDAAALTAWLTRAAVWRRRLDGRGDGA
Ga0308187_101817231	3300031114	Soil	VLPALRALEEPLGAVERALEAGDGPALTAWLTVAADWRRRVDP
Ga0335085_104961961	3300032770	Soil	RLWTEILLMNRDEILPALRALEEPLGELERALEAGDAEAVREWLAAASRWRRGLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences