Metagenome Family F064572

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064572
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	73 residues
Representative Sequence	MGTGRKTKIRIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV
Number of Associated Samples	84
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.66 %
% of genes near scaffold ends (potentially truncated)	26.56 %
% of genes from short scaffolds (< 2000 bps)	86.72 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.062 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.281 % of family members)
Environment Ontology (ENVO)	Unclassified (46.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.469 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 0.00% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF16864	Dimerisation2	15.62
PF08281	Sigma70_r4_2	7.03
PF00891	Methyltransf_2	2.34
PF00092	VWA	2.34
PF07992	Pyr_redox_2	1.56
PF13519	VWA_2	1.56
PF13442	Cytochrome_CBB3	1.56
PF04542	Sigma70_r2	1.56
PF12704	MacB_PCD	0.78
PF00069	Pkinase	0.78
PF13490	zf-HC2	0.78
PF15902	Sortilin-Vps10	0.78
PF12833	HTH_18	0.78
PF01569	PAP2	0.78
PF14310	Fn3-like	0.78
PF09720	Unstab_antitox	0.78
PF00149	Metallophos	0.78
PF13473	Cupredoxin_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.56
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.56
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.56
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	33.59 %
Unclassified	root	N/A	10.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	33.59 %
Unclassified	root	N/A	10.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	33.59 %
Unclassified	root	N/A	10.94 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	33.59 %
Unclassified	root	N/A	10.94 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	33.59 %
Unclassified	root	N/A	10.94 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	33.59 %
Unclassified	root	N/A	10.94 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	33.59 %
Unclassified	root	N/A	10.94 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	33.59 %
Unclassified	root	N/A	10.94 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02J5LFU	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	509	Open in IMG/M
2228664022\|INPgaii200_c1172161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1202	Open in IMG/M
2228664022\|INPgaii200_c1173131	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300000559\|F14TC_106507368	Not Available	703	Open in IMG/M
3300004156\|Ga0062589_101502316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	662	Open in IMG/M
3300005174\|Ga0066680_10302801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1020	Open in IMG/M
3300005293\|Ga0065715_10119337	All Organisms → cellular organisms → Bacteria → Proteobacteria	2289	Open in IMG/M
3300005354\|Ga0070675_101803291	Not Available	564	Open in IMG/M
3300005441\|Ga0070700_100629959	Not Available	844	Open in IMG/M
3300005445\|Ga0070708_100002424	All Organisms → cellular organisms → Bacteria	14457	Open in IMG/M
3300005445\|Ga0070708_100117706	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300005467\|Ga0070706_100371842	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300005467\|Ga0070706_100411706	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005467\|Ga0070706_100626830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	999	Open in IMG/M
3300005467\|Ga0070706_100710874	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005468\|Ga0070707_100263240	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300005468\|Ga0070707_100375868	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300005468\|Ga0070707_101572064	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005471\|Ga0070698_100077125	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300005471\|Ga0070698_100671402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	978	Open in IMG/M
3300005471\|Ga0070698_100680603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	970	Open in IMG/M
3300005471\|Ga0070698_100749374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	920	Open in IMG/M
3300005518\|Ga0070699_100242442	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300005518\|Ga0070699_100336688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1358	Open in IMG/M
3300005518\|Ga0070699_100920994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	801	Open in IMG/M
3300005518\|Ga0070699_101382465	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005536\|Ga0070697_100118690	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005536\|Ga0070697_100179839	All Organisms → cellular organisms → Bacteria → Acidobacteria	1793	Open in IMG/M
3300005536\|Ga0070697_100845888	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005536\|Ga0070697_101263147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	658	Open in IMG/M
3300005536\|Ga0070697_101386609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	627	Open in IMG/M
3300005546\|Ga0070696_100035540	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300005546\|Ga0070696_101432754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	590	Open in IMG/M
3300005598\|Ga0066706_10534304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	933	Open in IMG/M
3300005615\|Ga0070702_101413019	Not Available	569	Open in IMG/M
3300005842\|Ga0068858_100016217	All Organisms → cellular organisms → Bacteria	6999	Open in IMG/M
3300006046\|Ga0066652_101134423	Not Available	740	Open in IMG/M
3300006049\|Ga0075417_10590694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	564	Open in IMG/M
3300006794\|Ga0066658_10188171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1083	Open in IMG/M
3300006800\|Ga0066660_10338493	All Organisms → cellular organisms → Bacteria → Acidobacteria	1217	Open in IMG/M
3300006852\|Ga0075433_10108123	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300006852\|Ga0075433_11505735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	581	Open in IMG/M
3300006854\|Ga0075425_100427541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1525	Open in IMG/M
3300006854\|Ga0075425_102517442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	570	Open in IMG/M
3300006871\|Ga0075434_100311829	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300006871\|Ga0075434_102374132	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006904\|Ga0075424_102668905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	522	Open in IMG/M
3300006914\|Ga0075436_100665955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	770	Open in IMG/M
3300007265\|Ga0099794_10185949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1061	Open in IMG/M
3300007265\|Ga0099794_10364421	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300009038\|Ga0099829_10309802	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300009089\|Ga0099828_11163978	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300009147\|Ga0114129_10539500	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300009148\|Ga0105243_11840593	Not Available	637	Open in IMG/M
3300009162\|Ga0075423_12931023	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010373\|Ga0134128_11189219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	841	Open in IMG/M
3300010397\|Ga0134124_12316091	Not Available	578	Open in IMG/M
3300011269\|Ga0137392_10244310	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300012096\|Ga0137389_11044333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	700	Open in IMG/M
3300012198\|Ga0137364_11289037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	544	Open in IMG/M
3300012199\|Ga0137383_10882069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	653	Open in IMG/M
3300012200\|Ga0137382_11123136	Not Available	561	Open in IMG/M
3300012201\|Ga0137365_10095306	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300012201\|Ga0137365_10208864	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300012201\|Ga0137365_10972160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	617	Open in IMG/M
3300012202\|Ga0137363_10182233	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300012202\|Ga0137363_10628042	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300012202\|Ga0137363_10742327	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012205\|Ga0137362_10328611	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300012205\|Ga0137362_10590510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	958	Open in IMG/M
3300012205\|Ga0137362_10845923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	783	Open in IMG/M
3300012205\|Ga0137362_11469522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	568	Open in IMG/M
3300012210\|Ga0137378_10384792	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300012210\|Ga0137378_10839257	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012349\|Ga0137387_10354061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1063	Open in IMG/M
3300012350\|Ga0137372_10071347	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300012350\|Ga0137372_10200003	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300012350\|Ga0137372_10863525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	645	Open in IMG/M
3300012351\|Ga0137386_11143129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	548	Open in IMG/M
3300012353\|Ga0137367_10050904	All Organisms → cellular organisms → Bacteria	3114	Open in IMG/M
3300012353\|Ga0137367_10584614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	782	Open in IMG/M
3300012355\|Ga0137369_10219622	Not Available	1457	Open in IMG/M
3300012356\|Ga0137371_11423993	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012358\|Ga0137368_10382055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	929	Open in IMG/M
3300012360\|Ga0137375_10690281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	835	Open in IMG/M
3300012361\|Ga0137360_10003224	All Organisms → cellular organisms → Bacteria	9784	Open in IMG/M
3300012361\|Ga0137360_10609764	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012361\|Ga0137360_10688517	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300012361\|Ga0137360_11102999	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012362\|Ga0137361_11191210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	684	Open in IMG/M
3300012362\|Ga0137361_11340932	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012363\|Ga0137390_11999719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	505	Open in IMG/M
3300012582\|Ga0137358_10015501	All Organisms → cellular organisms → Bacteria	4833	Open in IMG/M
3300012917\|Ga0137395_10556946	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012918\|Ga0137396_10364413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300012923\|Ga0137359_10549750	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012923\|Ga0137359_10615628	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300012927\|Ga0137416_11841266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	553	Open in IMG/M
3300012929\|Ga0137404_10000092	All Organisms → cellular organisms → Bacteria	51168	Open in IMG/M
3300012929\|Ga0137404_11185704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	702	Open in IMG/M
3300012930\|Ga0137407_10114687	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300012958\|Ga0164299_10648183	Not Available	730	Open in IMG/M
3300013297\|Ga0157378_12516637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	567	Open in IMG/M
3300013306\|Ga0163162_12873534	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300015374\|Ga0132255_102374674	Not Available	809	Open in IMG/M
3300024310\|Ga0247681_1050939	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300025903\|Ga0207680_11094888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	570	Open in IMG/M
3300025922\|Ga0207646_10521486	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300025922\|Ga0207646_10588423	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300025922\|Ga0207646_10630244	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300025926\|Ga0207659_11822711	Not Available	517	Open in IMG/M
3300025930\|Ga0207701_10019633	All Organisms → cellular organisms → Bacteria → Proteobacteria	6492	Open in IMG/M
3300025936\|Ga0207670_11882608	Not Available	509	Open in IMG/M
3300025939\|Ga0207665_10180279	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300025961\|Ga0207712_10525373	Not Available	1015	Open in IMG/M
3300025961\|Ga0207712_11784925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	551	Open in IMG/M
3300026351\|Ga0257170_1061777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	526	Open in IMG/M
3300027603\|Ga0209331_1022151	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300027655\|Ga0209388_1016766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2023	Open in IMG/M
3300028047\|Ga0209526_10509561	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300031720\|Ga0307469_10835078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	848	Open in IMG/M
3300031754\|Ga0307475_10877995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	709	Open in IMG/M
3300031820\|Ga0307473_10469094	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300032174\|Ga0307470_11442535	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300032180\|Ga0307471_100239243	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300032180\|Ga0307471_101055455	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300032180\|Ga0307471_102975212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	601	Open in IMG/M
3300032205\|Ga0307472_101272006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.81%
Host-Associated	Host-Associated	17.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.81%
Plants	Host-Associated → Plants	17.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Loam	Environmental → Terrestrial → Soil → Loam	26.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_01796680	2065487018	Soil	MGTGRKTQIRIIKQGIVGNIPESQAVPVSGERPKKDPMAELICNVSVRVAEFKERRRPDPRITFQALFKEV
INPgaii200_11721612	2228664022	Soil	MGTGRKTQIRIIKQGIVGNIPESQAVPVSGERPKXDPMAELICNVSVWVAEFKERRRPDPRITFQALFKEV
INPgaii200_11731313	2228664022	Soil	MGTGRKTQIRIIKQGIVGNIPESQAVPVSGERPKKDPMAELICNVSVWVAEFKERRRPDPRITFQALFKEV
F14TC_1065073682	3300000559	Soil	MGTGRIRIIKQGTVSNIPGSQSAPAAKEKLVKDPTAELISNIAGWVTEFKERPRTDPRITFRALFKEA*
Ga0062589_1015023162	3300004156	Soil	MRAGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV*
Ga0066680_103028013	3300005174	Soil	MGTDRIRIIKQGTAGNIPNLQSALVPTEKHVKDPMAELICNISGWVTEFKERPRTDQRITFQALFKEL*
Ga0065715_101193371	3300005293	Miscanthus Rhizosphere	MRAGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKGPRT
Ga0070675_1018032911	3300005354	Miscanthus Rhizosphere	MRTGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV*
Ga0070700_1006299591	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NMRTGRIRIIKPGTMSNIPGSQSAPAPKEKLVKDLTAEVISHISGWVTEFKKRPRTDPRITFQALFKEV*
Ga0070708_1000024244	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTQIRIIKQGIAGNIPESQTPPVSKERPKKDPMAELIGSVSGWVAEFKGRRRPDPRITFQALFKEV*
Ga0070708_1001177066	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSEKIIEVEHMGTGRKTKIRIIKRGTASNIPELPAAPVPGEKPIKDPMAELFSSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0070706_1003718422	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTRIRIIKATPGNIPESQAAPLLGEKPVNDPMAELICSISGWVAEFKERPRPDPRIAFQALFKEV*
Ga0070706_1004117063	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTHIRIIKGTASNIPKTQEVPLPREEPMKDPMAELICSVSGWVAEFKARRGPDPRIAFQALFKEV*
Ga0070706_1006268301	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LSKKMTEVAHMGTGRKTQIRIVKQGTASNVPESQAALVPGAKPMKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKE
Ga0070706_1007108741	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSRKTKIRIIKRGTVSNIHELHAAPVPGEKPIKDPMAELFCVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0070707_1002632402	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTQIRIIKQGIAANIPESQTAPVSKERPKKDPMAELIGSVSGWVAEFKGRRRPDPRITFQALFKEV*
Ga0070707_1003758682	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VETGGKTKIRIIKRGTANSIHELHAAPLPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0070707_1015720642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EVEHMGTGRKTKIRIIKRGTASNIPESPAVPVPGEKPMKDPMAELFCGVSGWVAEFKQRRRPDPWITFQALFKEV*
Ga0070698_1000771254	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTQIRIIKQGIAGNIPESQTAPVSKERPKKDPMAELIGSVSGWVAEFKGRRRPDPRITFQALFKEV*
Ga0070698_1006714022	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LSEKMTEVAHVGTGRKTQIRIIKQGTASNIPESQAAPVPGAKPMKDPMAELFCSVSGWVAEFQQRRRPDPRITFQALFKEVWTSVSEKTLSQG
Ga0070698_1006806032	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGAGNIHELHTAPVPGEKPIKDPMAELFCVSGWVAEFKQRRRPDPRMTFQALFKEV*
Ga0070698_1007493742	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTKIRIIKRGTASNIPESPAVPVPGEKPMKDPMAELFCGVSGWVAEFKQRRRPDPWITFQALFKEV*
Ga0070699_1002424422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LSEKIIEVEHMGTGRKTKIRIIKRGTASNIPELPAAPVPVEKPIKDPMAELFGSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0070699_1003366882	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTKIRIIKQGTASNIPELEAVPVPVKKPKDPMAEWFCSISGWVAEFQQRRRPDPRITFQALFKEV*
Ga0070699_1009209942	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTQIRIIKQGTASNVLESQAAPVPGAKPMKDPMAELFCSVSGWVAEFKQRRRPDPRVTFQALFKEV*
Ga0070699_1013824651	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGGKTKIRIIKRGTVSNIHELHAAPLPVEKPIQDPMAELFCSMSGWVAEFKQRHRPDPKITFQALFKEV*
Ga0070697_1001186903	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRIRIIKQGTAGNIPESQSALVPTEKHVKDPMAELICNISGWVTEFKERPRTDPRITFQALFKEL*
Ga0070697_1001798392	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	METGRKTQIKIIKQETASDTLKSQAAPVPREKPVKDPKAELICSVSGWVAEFKERRRPDPRITFKALFKEV*
Ga0070697_1008458882	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGTRRKTQIRIIKQGIGGIIPESQAAPLSKETPKKDPTAELIRSVSGWVAEFKERRRPDPRITFQALFKEV*
Ga0070697_1012631471	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VIEVEHMGTGRKTQVRIIKQGTASNVPESQAALVPGAKPMKDPMAELFCSVSGWVAEFKQRRRPDPRVTFQALFKEV*
Ga0070697_1013866091	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LSEKIIEVEHMGTDRKTQIRIIKRGTASNIPELPSAPVPGEKPIKDPMAELFCSMSGWVTEFKQRRRPDPRITFQAL
Ga0070696_1000355406	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGGKTKIRIIKRGTVSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPKITFQALFKEV*
Ga0070696_1014327541	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGTGRKTQIRIIKQGIAGKIPESQAASVSRERPKKDPMAELICSVSGWVAEFKERRRPDPKITFQALFKEV*
Ga0066706_105343042	3300005598	Soil	MGTGRIRIIKQGTAGNIPNSQSALVPTEKHVKDPMAELICNISGWVTEFKERPRTDPRITFQALFKEL*
Ga0070702_1014130191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGRIRIIKPGTMSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV*
Ga0068858_1000162176	3300005842	Switchgrass Rhizosphere	MGTGRKTQIRIIKQGIAGSIAEAQAAAVSGERQKSDPMAELICRVSGWVAEFKERRRPDPRITFQALFKKV*
Ga0066652_1011344232	3300006046	Soil	MGTGRIRIIKQGTASNIPGSQSAPVPGEKFVKDPTRELISKIAGWVTEFKERPRTDPRIAFRALFKEV*
Ga0075417_105906941	3300006049	Populus Rhizosphere	MGTSRKTRVRIIKQGTASNIPESQGAPVPGEKPIKDPMAELFCSASGWVAEFKQRHRPDPRITFQALFKKVQTSV*
Ga0066658_101881712	3300006794	Soil	MIEVEDMGTGRKTQIRIIKRGSNIRKSPAAPVPGEKRMKDPMADLFSSVSGWVAEFKQRRRPHPRIIFQALFKEV*
Ga0066660_103384932	3300006800	Soil	MIEVEDMGTGRKTQIRIIKRGSNIRKSPAAPVPGAKRMKDPMADLFSSVSGWVAEFKQRRRPHPRIIFQALFKEV*
Ga0075433_101081234	3300006852	Populus Rhizosphere	LFGKIIEVEHMGTGGKTKIRIIKRGTVSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0075433_115057352	3300006852	Populus Rhizosphere	IRIIKQGIAGNIPESQAAPAPREKPVKDPTAELICGVSGWVTEFKEKRRSDPRITFQALFKEV*
Ga0075425_1004275411	3300006854	Populus Rhizosphere	LFGKIIEVEHMGTGGKTKIRIIKRGTLSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0075425_1025174422	3300006854	Populus Rhizosphere	VTEVRLMGTGKKTQIRVIKGTASNIPEAQEAPLPREKPKKDPMAEMICSVSGWVAEFKERRRPNPRITFQALFKEL*
Ga0075434_1003118292	3300006871	Populus Rhizosphere	MGTGGKTKIRIIKRGTVSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0075434_1023741322	3300006871	Populus Rhizosphere	KVTEVRLMGTGKKTQIRVIKGTASNIPEAQEAPLPREKPKKDPMAEMICSVSGWVAEFKERRRPNPRITFQALFKEL*
Ga0075424_1026689051	3300006904	Populus Rhizosphere	MGTGRKTQIRIIKQRTASNIPASQAAPVPREKPVKDPMTKLICGVSGWVAEFKERRRPDPRIT
Ga0075436_1006659551	3300006914	Populus Rhizosphere	LFGKIIEVEHMGTGGKTKIRIIKRGTLSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPKITFQALFKEV*
Ga0099794_101859492	3300007265	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTANNIPELQAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0099794_103644211	3300007265	Vadose Zone Soil	KMIEVEDMGTGRKTQIRIIKRGSNIRKSPAAPVPGEKRMKDPMADLLSSVSGWVAEFKQRRQPDPRITFQALFKEV*
Ga0099829_103098021	3300009038	Vadose Zone Soil	LFGKIIEVEHMGTGRKTKIRIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0099828_111639782	3300009089	Vadose Zone Soil	MGTGRKTRIRIIKRGTASNIPELQAAPVPAEKPTKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0114129_105395001	3300009147	Populus Rhizosphere	MGTGKKTQIRVIKGTASNIPEAQEAPLPREKPKKDPMAEMICSVSGWVAEFKERRRPNPRITFQALFKEL*
Ga0105243_118405931	3300009148	Miscanthus Rhizosphere	MRTGRIRIIKPGTMSNIPGSQSAPAPKEKLVKDPTAEVISHISGWVTEFKKRPRTDPRITFQALFKEV*
Ga0075423_129310232	3300009162	Populus Rhizosphere	PLFGKIIEVEHMGTGGKTKIRIIKRGTASDIHELHAAPLPGEKPIKDPMAELVCSVSGWVAEFKQHQPDPRITFQALFKEV*
Ga0134128_111892191	3300010373	Terrestrial Soil	QIRIIKRRIAGNIPESQAAPVSRERPKKDPMAALICNVSGWVSEFKERRRPDPGITFQALFKEV*
Ga0134124_123160911	3300010397	Terrestrial Soil	GRIRIIKPGTMSNIPGSQSAPAPKEKLVKDPTAEVISHISGWVTEFKKRPRTDPRITFQALFKEM*
Ga0137392_102443101	3300011269	Vadose Zone Soil	MGTGRKTKIRIIKRTGSNIPESPAAPVPEVKSIKDPMAELFCRVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137389_110443331	3300012096	Vadose Zone Soil	LSEKIIEVEHMGTGRKTKIRIIKRGTASNIHELQAVPVPGEKSTKDPMAELYCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137364_112890372	3300012198	Vadose Zone Soil	KRSSRSNMGTGRRTQIRIIKHGTASNIPESQAAPVPGEKPMKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0137383_108820691	3300012199	Vadose Zone Soil	MGTGRKTQIRIIKQGIAGNIPESQTAPVSKEGPKKDPMAELIGSVSGWVAEFKGRRRPDPRITFQALFKEV*
Ga0137382_111231362	3300012200	Vadose Zone Soil	MGTGRIRIIKQGTASNIPGSQSAPVPGEKFVKDPTQELISKIAAWVTEVKERPGSISASK
Ga0137365_100953062	3300012201	Vadose Zone Soil	MGTGRKTQIRIIKGTASNIPETQEAALPGEKPKKDPMAEMICSVSGWVAEFKERRRPDPRITFQALFKES*
Ga0137365_102088642	3300012201	Vadose Zone Soil	MGTGRIRIIKQGSASNIPESQSALVPREKHVKDPMAELICNISGWVTEFKERPQTDPRDTFQALFKEV*
Ga0137365_109721601	3300012201	Vadose Zone Soil	MGTDRKTQIRIIKQRTARNIPASKAAPVPRKKPVKDPMSELIFSVSGWVAEFKERRRPDPRITFQALFKEL*
Ga0137363_101822332	3300012202	Vadose Zone Soil	MIEVEHMGTGRKTRIRIIKQGTPGNIPESQAAPLRGEKPVNDPMAELIWSISGWVAEFKERPRPDPRIAFQALFKEV*
Ga0137363_106280422	3300012202	Vadose Zone Soil	MIEVEDMGTGRKTQIRIIKRGSNIRKSPAAPVPGEKRMKDPMADLLSSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137363_107423272	3300012202	Vadose Zone Soil	LFGKIVEVEHMGTGGKTKIGIIKRGTASNIHELHAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0137362_103286112	3300012205	Vadose Zone Soil	MGTGRKTKIRIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137362_105905102	3300012205	Vadose Zone Soil	LFGKIIEVEHMGTGEKTKIRIIKRGTASNIHELHAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0137362_108459232	3300012205	Vadose Zone Soil	MIEVEHMGTGRKTRIRIIKQGTPGTIPESQAAPLRGEKPVNDPMAELIWSISGWVAEFKERPRPDPRIAFQALFKEV*
Ga0137362_114695222	3300012205	Vadose Zone Soil	MIEVEDMGTGRKTQIRIIKRGSNIRKSPAAPVPGAKRMKDPMADLFSSVSGWVAEFKQRRRPHPRITFQALFKEV*
Ga0137378_103847921	3300012210	Vadose Zone Soil	IIKQGTARNIPASKAAPVPRKKPVKDPMSELIFSVSGWVAEFKERRRPDPRITFQALFKES*
Ga0137378_108392571	3300012210	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTASNIHELHAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137387_103540611	3300012349	Vadose Zone Soil	MGTGRVRIIKRGTASNINVSQSAPVPREKHVKDPMAELICSVSGWVAEFKERRRPDPKITFQALFKEM*
Ga0137372_100713472	3300012350	Vadose Zone Soil	MGRGRVRIIKRGTASNIEVSQSAPMPREKHVKDPMAELICNVSGWVTEFKERSRPDPRITFQALFKEL*
Ga0137372_102000031	3300012350	Vadose Zone Soil	VQERDSVFWKVIEVKLMERGRVRIIKRGTASNIQVSQSAPVPREKPMKDPMAELIVSLSGWVAEFKERRRTDPRITFQALFK*
Ga0137372_108635251	3300012350	Vadose Zone Soil	VQERDSVFWKVIEVKLMERGRVRIIKRGTASNIQVSQSAPAPREKHVKDPMAELICNVSGWVTEFKERSRPDPRIKFQALFKEV*
Ga0137386_111431291	3300012351	Vadose Zone Soil	TQIRIIKGTASNIPETQEAALPGEKPKKDPMAEMICSVSGWVAEFKERRRPDPKITFQALFKES*
Ga0137367_100509043	3300012353	Vadose Zone Soil	VIEVEHMGTGRKTQIRIIKQATVSNIPESQATPVSREKPMKDPMAELACNVSGWVAEFKERRRPDPKITFQALFKEV*
Ga0137367_105846141	3300012353	Vadose Zone Soil	IEVKLMERGRVRIIKRGTASNIQVSQSAPAPREKHVKDPMAELICNVSGWVTEFKERSRPDPRITFQALFK*
Ga0137369_102196221	3300012355	Vadose Zone Soil	VIEVEHMGTGRKTQIRIIKQATVSNIPESQATPVSREKPMKDPMAELACNVSGWVAEFKEKRRPDPKITFQALFKEV*
Ga0137371_114239931	3300012356	Vadose Zone Soil	SVFWKVTEVKLMGTGRKTQIRIIKGTASNIPETQEAALPGEKPKKDPMAEMICSVSGWVAEFKERRRPDPRITFQALFKES*
Ga0137368_103820551	3300012358	Vadose Zone Soil	MGTGRKTQIRIIKQGTVSNIPESQATPVSREKPMKDPMAELACNVSGWVAEFKERRRPDPKITFQALFKE
Ga0137375_106902811	3300012360	Vadose Zone Soil	VIEVEHMGTGRKTQIRIIKQGTVSNIPESQATPVSREKPMKDPMAELACNVSGWVAEFKERRRPDPKITFQALFKEV*
Ga0137360_100032248	3300012361	Vadose Zone Soil	MGTSRTTKIRIIRRGTASNVPELPAAPVPGEKPAKDPMAELFCSVSGWVAEFKQRRRPDPRITFQGLFKEV*
Ga0137360_106097642	3300012361	Vadose Zone Soil	LFGKIVEVEHMGTGGKTKIRIIKRGTASNIHELHAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0137360_106885172	3300012361	Vadose Zone Soil	MIEVEDMGTGRKTQIRIIKRGSNIRKSPAPPVPGEKRMKDPMADLLSSVSGWVAEFKQRRQPDPRITFQALFKEV*
Ga0137360_111029992	3300012361	Vadose Zone Soil	MIEVEDMGIGRETQIKIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137361_111912101	3300012362	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTASNIHELHAAPVLGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV*
Ga0137361_113409322	3300012362	Vadose Zone Soil	IKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGSVAEFKQRRRPDPRITFQALFKEV
Ga0137390_119997191	3300012363	Vadose Zone Soil	LFGKIIEVEHMGTGRKTKIRIIKRTATNIPESPAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137358_100155012	3300012582	Vadose Zone Soil	MGTGRTIKIRIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137395_105569462	3300012917	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTAGNIPELPAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137396_103644131	3300012918	Vadose Zone Soil	MIEVEHMGTGRKTRIRIIKQATPGNIPESQAAPLPGEKPMKDAMAVLMCNVSGWVAEFKARRRPDPRITFQALFKKA*
Ga0137359_105497502	3300012923	Vadose Zone Soil	MGTGRKTQIRIIKGTASNIPETQEAALPGEKPKKDSMAEMICSVSGWVAEFKERRRPDPRITFQALFKEL*
Ga0137359_106156281	3300012923	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTASNIPELQAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV*
Ga0137416_118412661	3300012927	Vadose Zone Soil	MRTDRRTQIRIIKGSASNITESQAAPLPGEKPMRDAMAVLTCNVSGWVAEFKARRRPDPRITFQALFKKA*
Ga0137404_1000009231	3300012929	Vadose Zone Soil	METGRKTQIRIIKQETASNTLESQAAPVPSEKPVKDPKAELICSVSGWVAEFKERRRPDPRITFKALFKEV*
Ga0137404_111857042	3300012929	Vadose Zone Soil	MRTGRKTQIRIIKQGIASNIPESQAAPVAREKPMKDPMVELICNVSGWVAEFKEGRRPDPRITFQALFKEV*
Ga0137407_101146872	3300012930	Vadose Zone Soil	MRTGRKTQIRIIKQGIASNIPGSQAALISREGPKKDPMAELTCSVSGWVAEFRERRRPDPRITFQALFKEV*
Ga0164299_106481831	3300012958	Soil	MRTGRIRIIKPGTMSNIPGSQSAPAPKEKLVKDPTAEVISHISGWVTEFKKRPRTDPRITFQALFKEM*
Ga0157378_125166371	3300013297	Miscanthus Rhizosphere	MIERSNMRTGRNTQIRIIKQGNARNLTESTVLPVAGAKPMKDPMAELFCRVAGWVAEFKQRRGPDPRVAFRALFKQV*
Ga0163162_128735341	3300013306	Switchgrass Rhizosphere	MIERSNMRTGRNTQIRIIKQGNARNLTESTVLPVAGAKPMKDPMAELFCRVAGWVAEFKQRRGPDPRVAFQALFKQV*
Ga0132255_1023746741	3300015374	Arabidopsis Rhizosphere	MRTGRIRIIKPGTVSNIPGSQSAPAPKEKLVKDPTAESISHISGWVTEFKKRPRTDPRITFQA
Ga0247681_10509391	3300024310	Soil	RIIKRGTVSNIHELHAAPLPVEKPIKDPMAELFCSVSGWVAEFKQRHRPDPKITFQALFKEV
Ga0207680_110948881	3300025903	Switchgrass Rhizosphere	MGTGRKTQIRIIKQGIAGSIAEAQAAAVSGERQKSDPMAELICSVSGWVAEFKERRRPDPRITFQALFKKV
Ga0207646_105214862	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RDNYRREIPLYKKIMEVEHMGTGRKTKIRIIKRGTASNIPESPAVPVPGEKPMKDPMAELFCGVSGWVAEFKQRRRPDPWITFQALFKEV
Ga0207646_105884232	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LFGKIIEVAHVETGGKTKIRIIKRGTANSIHELHAAPLPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV
Ga0207646_106302441	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIEVEHMGTGRKTQIRIIKQGIAANIPESQTAPVSKERPKKDPMAELIGSVSGWVAEFKGRRRPDPRITFQALFKEV
Ga0207659_118227111	3300025926	Miscanthus Rhizosphere	MRTGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV
Ga0207701_100196331	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRAGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV
Ga0207670_118826081	3300025936	Switchgrass Rhizosphere	MRAGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQAL
Ga0207665_101802792	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSRKTKIRIIKQGTASNIPESQGAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV
Ga0207712_105253731	3300025961	Switchgrass Rhizosphere	MGTGRIRIIKQGTVSNIPGSQSAPAPKEKLVKDPTAELISHISGWVTEFKKRPRTDPRITFQALFKEV
Ga0207712_117849251	3300025961	Switchgrass Rhizosphere	IKQRTVRNIRGSQSAPAPGEKLVKDPTAELISHVAGWVTEFKDRPRTDPRITFRALFKA
Ga0257170_10617771	3300026351	Soil	LFGKIIEVEHMGTGEKTKIRIIKRGTASNIHELHAAPVPGEKPTKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV
Ga0209331_10221512	3300027603	Forest Soil	MGTGRKTKIRIIKQGTASNIPESQAAPVPGEKPVKDLMAELFCNVSGWVAEFKQRRRPDPRITFQALFKEV
Ga0209388_10167662	3300027655	Vadose Zone Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTASNIHELHAAPVPGEKPIKDPMAELFCSVSGWVAEFKQRHRPDPRITFQALFKEV
Ga0209526_105095611	3300028047	Forest Soil	LFGKIIEVEHMGTGRKTKIRIIKRGTARHISESQAAAVPRERPMKDPMVDLFCSVSGWVAEFKQRRRPDPRVTFRALFKE
Ga0307469_108350781	3300031720	Hardwood Forest Soil	VIEVEHIGTGRIRIIKQGTAGNIPESQSALVPTEKHVKDPMAELICNISEWVTEFKERPRTDPRITFQALFKEV
Ga0307475_108779951	3300031754	Hardwood Forest Soil	LSENVIEVELMKTGSKTQIRIIKRNASIIPESEAAPPLPRANPNKDPMAELICSVSGWVAEFKERRRPDPRIAFQALFKEV
Ga0307473_104690942	3300031820	Hardwood Forest Soil	LFGKIIEVEHMGTGGKTKIRIIKRGTASNIHELHAAPLPGEKPIKDPMAELFCSVSGWVAEFNARRRPDPRITFQALFKEV
Ga0307470_114425352	3300032174	Hardwood Forest Soil	LEKIIEVEHMGTGGKTRIRIIKRGTASNIHELHAAPLPGGKPIKDPMAELFCSVSGWVAEFKQRRRPDPRITFQALFKEV
Ga0307471_1002392434	3300032180	Hardwood Forest Soil	MGTGRIRIIKQGAAGNIPESQSALVPTEKHVKDPMAELICNISGWVTEFKERPRTDPRITFQALFKEL
Ga0307471_1010554552	3300032180	Hardwood Forest Soil	VIEVEHIGTGRIRIIKQGTAGNIPESQSALVPTEKHVKDPMAELICNISGWVTEFKERPRTDPRITFQALFKEV
Ga0307471_1029752122	3300032180	Hardwood Forest Soil	MGTSRKTQIRIIKQGTASNIPESQAAPVPREKRMKDPMADLFFSVSGWVAEFKQRPRPDPRVTFRALFKEV
Ga0307472_1012720062	3300032205	Hardwood Forest Soil	MGTGRIRIIKQGTASNTPESQSALVPREKDVKDPMAELIRNVSGWVDEFKGRRRPDPRITFQTLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064572

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences