Metagenome / Metatranscriptome Family F064564

Overview

Basic Information

• Family ID: F064564
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 128
• Average Sequence Length: 42 residues
• Representative Sequence: LGLVPFTSPAPNSPIRANPRRNAAYFFAEGFKVPVTWLFNR
• Number of Associated Samples: 111
• Number of Associated Scaffolds: 128

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 1.56 %
• % of genes near scaffold ends (potentially truncated): 97.66 %
• % of genes from short scaffolds (< 2000 bps): 86.72 %
• Associated GOLD sequencing projects: 108
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (53.906 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (16.406 % of family members)
• Environment Ontology (ENVO): Unclassified (46.094 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (55.469 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 31.88%
  β-sheet: 0.00%
  Coil/Unstructured: 68.12%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00293	NUDIX	77.34
PF08281	Sigma70_r4_2	9.38
PF04542	Sigma70_r2	4.69
PF05188	MutS_II	1.56
PF01541	GIY-YIG	0.78
PF03544	TonB_C	0.78
PF02698	DUF218	0.78
PF13432	TPR_16	0.78
PF05192	MutS_III	0.78
PF13490	zf-HC2	0.78
PF06144	DNA_pol3_delta	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	4.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	4.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	4.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	4.69
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	2.34
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.78
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.78
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.78

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.91 %
Unclassified	root	N/A	46.09 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.91 %
Unclassified	root	N/A	46.09 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.91 %
Unclassified	root	N/A	46.09 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	40.62 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	40.62 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	31.25 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	6.25 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	31.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.25 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	31.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.25 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	22.66 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.25 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.56 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	22.66 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.25 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.56 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001086|JGI12709J13192_1000867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	5000
3300001661|JGI12053J15887_10362489	Not Available	700
3300002560|JGI25383J37093_10112857	All Organisms → cellular organisms → Bacteria	776
3300002562|JGI25382J37095_10052437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1566
3300002908|JGI25382J43887_10276526	Not Available	755
3300004780|Ga0062378_10153967	All Organisms → cellular organisms → Bacteria	610
3300005172|Ga0066683_10285853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1025
3300005177|Ga0066690_10926113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	554
3300005187|Ga0066675_10243336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1282
3300005406|Ga0070703_10415687	Not Available	589
3300005441|Ga0070700_100688330	Not Available	811
3300005444|Ga0070694_100097002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2079
3300005445|Ga0070708_100711655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	945
3300005467|Ga0070706_100746264	Not Available	907
3300005552|Ga0066701_10680689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	619
3300005560|Ga0066670_10215436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1157
3300005561|Ga0066699_10365019	Not Available	1032
3300005895|Ga0075277_1068564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	571
3300006032|Ga0066696_10065990	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2082
3300006034|Ga0066656_10638761	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	687
3300006046|Ga0066652_102094538	Not Available	501
3300006794|Ga0066658_10651397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	577
3300006796|Ga0066665_10311630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1269
3300006800|Ga0066660_11653798	Not Available	509
3300006852|Ga0075433_11253239	Not Available	643
3300006854|Ga0075425_101599493	Not Available	734
3300006854|Ga0075425_103090628	All Organisms → cellular organisms → Bacteria	507
3300006903|Ga0075426_11065164	Not Available	612
3300006914|Ga0075436_100176118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1511
3300006914|Ga0075436_101063807	Not Available	608
3300006918|Ga0079216_10176446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1145
3300006954|Ga0079219_12115002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	539
3300007076|Ga0075435_101015079	Not Available	724
3300009012|Ga0066710_100004517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	12348
3300009012|Ga0066710_100158157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3164
3300009012|Ga0066710_101004857	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1287
3300009038|Ga0099829_11201739	Not Available	628
3300009137|Ga0066709_100639641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1521
3300009137|Ga0066709_100821934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1348
3300009147|Ga0114129_10683383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1321
3300009156|Ga0111538_13100742	Not Available	580
3300009809|Ga0105089_1041396	Not Available	689
3300010087|Ga0127492_1088017	Not Available	617
3300010304|Ga0134088_10155082	All Organisms → cellular organisms → Bacteria	1090
3300010320|Ga0134109_10413612	Not Available	541
3300010323|Ga0134086_10281793	Not Available	641
3300010329|Ga0134111_10021839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2164
3300010329|Ga0134111_10072692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1285
3300010329|Ga0134111_10375340	Not Available	605
3300010336|Ga0134071_10076724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1559
3300010336|Ga0134071_10643045	Not Available	557
3300010337|Ga0134062_10548824	Not Available	588
3300010371|Ga0134125_10971137	Not Available	932
3300010371|Ga0134125_12520419	Not Available	559
3300011270|Ga0137391_11387647	Not Available	549
3300011271|Ga0137393_10371263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1223
3300012199|Ga0137383_10345739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1089
3300012200|Ga0137382_11033991	Not Available	589
3300012202|Ga0137363_10970733	Not Available	721
3300012203|Ga0137399_10182570	All Organisms → cellular organisms → Bacteria	1695
3300012206|Ga0137380_10146370	All Organisms → cellular organisms → Bacteria	2154
3300012207|Ga0137381_10041601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3762
3300012207|Ga0137381_11451979	Not Available	578
3300012211|Ga0137377_11617673	All Organisms → cellular organisms → Bacteria	571
3300012228|Ga0137459_1059454	All Organisms → cellular organisms → Bacteria	1090
3300012349|Ga0137387_10273192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1220
3300012349|Ga0137387_10479116	Not Available	903
3300012356|Ga0137371_10088710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2403
3300012392|Ga0134043_1013409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1130
3300012685|Ga0137397_10595128	Not Available	823
3300012918|Ga0137396_10642021	Not Available	784
3300012922|Ga0137394_11179760	Not Available	630
3300012977|Ga0134087_10210349	Not Available	875
3300014154|Ga0134075_10081602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1357
3300014154|Ga0134075_10265305	Not Available	744
3300014166|Ga0134079_10085847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1176
3300015053|Ga0137405_1422394	Not Available	2869
3300015358|Ga0134089_10524591	Not Available	522
3300015371|Ga0132258_11761969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1561
3300015372|Ga0132256_102914037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	575
3300015373|Ga0132257_101126903	Not Available	991
3300017659|Ga0134083_10358295	Not Available	629
3300017997|Ga0184610_1198989	Not Available	669
3300018064|Ga0187773_11229124	All Organisms → cellular organisms → Bacteria	505
3300018071|Ga0184618_10053296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1478
3300018431|Ga0066655_10052941	All Organisms → cellular organisms → Bacteria	2102
3300018431|Ga0066655_10066717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1914
3300018433|Ga0066667_11204529	Not Available	659
3300018468|Ga0066662_12396555	Not Available	555
3300018476|Ga0190274_12710653	Not Available	592
3300018482|Ga0066669_11015887	Not Available	748
3300019882|Ga0193713_1003986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4733
3300020004|Ga0193755_1027775	All Organisms → cellular organisms → Bacteria	1873
3300020199|Ga0179592_10091177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1399
3300024219|Ga0247665_1003376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1639
3300025160|Ga0209109_10529736	Not Available	530
3300025324|Ga0209640_11369174	Not Available	519
3300025327|Ga0209751_10587597	Not Available	898
3300025915|Ga0207693_10867568	All Organisms → cellular organisms → Bacteria	694
3300026277|Ga0209350_1027601	All Organisms → cellular organisms → Bacteria	1712
3300026295|Ga0209234_1060296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1443
3300026296|Ga0209235_1167329	Not Available	838
3300026297|Ga0209237_1023417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3482
3300026298|Ga0209236_1026663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3144
3300026300|Ga0209027_1093736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1085
3300026301|Ga0209238_1261053	Not Available	517
3300026305|Ga0209688_1022985	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1208
3300026318|Ga0209471_1249943	Not Available	610
3300026334|Ga0209377_1003873	All Organisms → cellular organisms → Bacteria	9518
3300026334|Ga0209377_1227560	Not Available	614
3300026536|Ga0209058_1302658	Not Available	550
3300026540|Ga0209376_1092362	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1575
3300026548|Ga0209161_10008693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7776
3300026548|Ga0209161_10011690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6584
3300026548|Ga0209161_10414968	Not Available	591
3300026551|Ga0209648_10640956	Not Available	582
3300026557|Ga0179587_10812096	Not Available	617
3300027725|Ga0209178_1286052	Not Available	604
3300027821|Ga0209811_10207538	All Organisms → cellular organisms → Bacteria	741
3300027875|Ga0209283_10947239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	517
3300028719|Ga0307301_10080135	All Organisms → cellular organisms → Bacteria	1024
3300028792|Ga0307504_10183177	Not Available	732
3300031820|Ga0307473_10802788	Not Available	671
3300032180|Ga0307471_100407258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1489
3300032180|Ga0307471_100573338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1285
3300032205|Ga0307472_101923025	Not Available	591
3300033407|Ga0214472_10650005	Not Available	963
3300033432|Ga0326729_1071347	All Organisms → cellular organisms → Bacteria	530

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.62%
Host-Associated	Host-Associated	9.38%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	9.38%
Aquatic	Environmental → Aquatic	3.12%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.81%
Sediment	Environmental → Aquatic → Sediment	2.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.56%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001086	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3	Environmental
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12709J13192_10008671	3300001086	Forest Soil	LIIAQRLGLVPYTSPATGSPIHSNVRRNTGYLFAEGFKVPFTWLFQH*
JGI12053J15887_103624892	3300001661	Forest Soil	PFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
JGI25383J37093_101128572	3300002560	Grasslands Soil	MQLASKRLQIIASRLGLMPFTSPAPGSPIHANARRNTGYLFAEGFKVPFTWLFQR*
JGI25382J37095_100524373	3300002562	Grasslands Soil	RLQIIASRLGLMPFTSPAPGSPIHANARRNTGYXFAEGFKVPFTWLFQR*
JGI25382J43887_102765262	3300002908	Grasslands Soil	IIARRLGLTPYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR*
Ga0062378_101539671	3300004780	Wetland Sediment	LRIIAQRLGLVPFTSPAPGSPIHANVRRNAGYLLAEGFKVPFTWLFQR*
Ga0066683_102858531	3300005172	Soil	RIIATRLGLVPFTSPATNSPIRSNPRRNAAYFLAEGFKVPVTWLFNR*
Ga0066690_109261132	3300005177	Soil	GLLPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWLFNH*
Ga0066675_102433363	3300005187	Soil	IIATHLGLIPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0070703_104156872	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ATRLGLVPYTSPAPGSPIRANPRRNAAYFLAEGLKVPVTWLFNH*
Ga0070700_1006883301	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QIIAKRQGLVPYTSPATGSPIHASLRRNTGYLFAEGFKVPFTWLFQL*
Ga0070694_1000970021	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RVGLAPFTSPTPSSPIRSNPRLNASYLLVEGFKVPVTWLFQH*
Ga0070708_1007116553	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LAPFTSPAPNSPIRSNPRRNAAYYFAEGFKVPITWIFNR*
Ga0070706_1007462641	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HRGLIAYTSPAPGSPIRANPRRNAAYTLSEGFKVPITWLLDR*
Ga0066701_106806892	3300005552	Soil	RLGLVPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPLTWAFNR*
Ga0066670_102154363	3300005560	Soil	FTSPAPNSPIRANPRRNAAYFFAEGYKVPVTWLFNR*
Ga0066699_103650193	3300005561	Soil	MLRLQIIATHLGLAPFTSPAPNSPIHANPRRNAAYFFAEGFKVPVTWLFNR*
Ga0075277_10685641	3300005895	Rice Paddy Soil	RLGLVAFTSPAPNSPIRSNPRRNAAYFLAEGLKVPVTWVFNR*
Ga0066696_100659904	3300006032	Soil	ARRLGLTPYTSPATGSPIHASFRRNTGYLFAEGFKVPFTWLFQR*
Ga0066656_106387611	3300006034	Soil	QIIASRLGLVPFTSPTPNSPIHANPRLNAGYLFAEGVKVPLTWLFQH*
Ga0066652_1020945382	3300006046	Soil	SPAPNSPIHANPRRNAAYFFAEGFKVPVTSLFNR*
Ga0066658_106513972	3300006794	Soil	LGLVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH*
Ga0066665_103116303	3300006796	Soil	FTSPAPNSPIHANPRRNAAYFFAEGFKVPVTWLFNR*
Ga0066660_116537982	3300006800	Soil	VPFTSPAPNSPIRANPRRNAAYFFAEGFKVPVTWLFNH*
Ga0075433_112532392	3300006852	Populus Rhizosphere	LTSPAADSPIRASSRRNLAYVVAEGFKVPFTWLFHR*
Ga0075425_1015994931	3300006854	Populus Rhizosphere	LTPYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0075425_1030906282	3300006854	Populus Rhizosphere	PYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0075426_110651641	3300006903	Populus Rhizosphere	SPATGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0075436_1001761183	3300006914	Populus Rhizosphere	FHLLRLKILADHRGLIAYTSPAPGSPIRANPRRNAAYTLSEGFKVPITWLLDR*
Ga0075436_1010638072	3300006914	Populus Rhizosphere	FTSPAPGSPIRASPRRNAGFILAEGVKVPIAWLFQH*
Ga0079216_101764463	3300006918	Agricultural Soil	PFTSPSPSSPIHSNPRRNTGYLFAEGFKVPFTWLFQH*
Ga0079219_121150022	3300006954	Agricultural Soil	LRLRILATRHGLLPFTSPAPGSPIRSNPRRNAAYFLAEGFKVPITWLFNR*
Ga0075435_1010150791	3300007076	Populus Rhizosphere	YTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0066710_1000045171	3300009012	Grasslands Soil	PYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWLFQH
Ga0066710_1001581575	3300009012	Grasslands Soil	FTSPATGSPIHANVRRNTGYLFAEGFKVPFTWLFQH
Ga0066710_1010048573	3300009012	Grasslands Soil	FTSPAPNSPIHANPRRNAAYFFAEGFKVPVTWLFNR
Ga0099829_112017391	3300009038	Vadose Zone Soil	IATRLGLLPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0066709_1006396413	3300009137	Grasslands Soil	TPYTSPAAGSPIHANVRRNAAYLFAEGFKVPFTWLFQR*
Ga0066709_1008219341	3300009137	Grasslands Soil	GLVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH*
Ga0114129_106833833	3300009147	Populus Rhizosphere	SPAPGSPIRASRRRYLTYLAAEGVKVPFSWIFQR*
Ga0111538_131007422	3300009156	Populus Rhizosphere	GLVPFTSPAPGSPIRGSLRRNTAYHLAEGFKVPLTWLFQH*
Ga0105089_10413961	3300009809	Groundwater Sand	TSPAPGSPIRSNPRLNTGYFLAEGIKVPVTWLFNR*
Ga0127492_10880171	3300010087	Grasslands Soil	IIATRLGLQPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0134088_101550821	3300010304	Grasslands Soil	LGLVPYTSPASGSPIHANARRNTGYLFAEGFKVPFTWLFQR*
Ga0134109_104136121	3300010320	Grasslands Soil	TSPAPGSPIRASPRRNAGYLLAEGIKVPLAWLFQH*
Ga0134086_102817931	3300010323	Grasslands Soil	LRIIAERLDLTPYTSPAPGSPIHANVRRNTGYLFAEGFKVPITWLFQR*
Ga0134111_100218394	3300010329	Grasslands Soil	SPATGSPIHANVRRNTGYLFAEGFKVPFTWLFQH*
Ga0134111_100726921	3300010329	Grasslands Soil	MPFTSPAPGSPIHANARRNTGYLFAEGFKVPFTWLFQR*
Ga0134111_103753402	3300010329	Grasslands Soil	ATRLGLQPFTSPAPNSPIRSNPRRNAAYFLTEGFKVPVTWLFNR*
Ga0134071_100767243	3300010336	Grasslands Soil	FTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0134071_106430451	3300010336	Grasslands Soil	THLGLAPFTSPAPNSPIRSNPRRNAAYYFAEGFKVPVTWIFNR*
Ga0134062_105488241	3300010337	Grasslands Soil	TPYTSPAPGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0134125_109711371	3300010371	Terrestrial Soil	IATRLGLLPFTSPAPNSPIRSNPRRNAAYFFAEGFKVPVTWVFNR*
Ga0134125_125204191	3300010371	Terrestrial Soil	LGLVPFTSPAPGSPIHANARRHTGYLFAEGFKVPFTWLFQH*
Ga0137391_113876472	3300011270	Vadose Zone Soil	ATRLGLAPFTSPAPNSPIHANPRRNTTYMLAEGIKVPVAWLFQH*
Ga0137393_103712633	3300011271	Vadose Zone Soil	LTPYTSPAAGSPIHANIRRNTGYLFAEGFKVPFTWLFQH*
Ga0137383_103457391	3300012199	Vadose Zone Soil	QPFTSPAPNSPIRSNPRRNAAYFLTEGFKVPVTWLFNR*
Ga0137382_110339912	3300012200	Vadose Zone Soil	ARRLGLTPYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0137363_109707332	3300012202	Vadose Zone Soil	LRLRIIATRLGLQPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0137399_101825704	3300012203	Vadose Zone Soil	LRLQIIATRLGLVPFTSPAANSPIRANPRRNAAFFFAEGFKVPITWLFNR*
Ga0137380_101463701	3300012206	Vadose Zone Soil	HLGLAPFTSPAPNSPIHANPRRNAAYFFAEGFKVPVTWLFNR*
Ga0137381_100416011	3300012207	Vadose Zone Soil	MLRLQILATRLGLVPFTSPAPNSPIRSSPRRNASYLFAEGFKVPVTWLFNR*
Ga0137381_114519791	3300012207	Vadose Zone Soil	LGLTPYTSPAPGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0137377_116176733	3300012211	Vadose Zone Soil	FTSPTPTSPIHSNPRLNAGYLLAEGVKVPVTWLFQR*
Ga0137459_10594541	3300012228	Soil	RLGLVPFTSPVPNSPIRSNPRLHASYLLVEGLKVPVTWLFQH*
Ga0137387_102731923	3300012349	Vadose Zone Soil	QIIARRLGLVPFTSPATGSPIHANVRRNTGYLFAEGFKVPFTWLFQH*
Ga0137387_104791163	3300012349	Vadose Zone Soil	TSPAPNSPIRSNPRRNAAYYFAEGFKVPVTWIFNR*
Ga0137371_100887101	3300012356	Vadose Zone Soil	TSPAPNSPIRSNPRRNAAYFLTEGFKVPVTWLFNR*
Ga0134043_10134091	3300012392	Grasslands Soil	ATRLGLQPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR*
Ga0137397_105951282	3300012685	Vadose Zone Soil	GMTPYTSPATGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0137396_106420212	3300012918	Vadose Zone Soil	RLGLVGFTSPAPGSPIHANTRLNAGYFFAEGLKVPLAWLYRR*
Ga0137394_111797601	3300012922	Vadose Zone Soil	LRIIATRLGLLPFTSPAPNSPIRSNPRRNAAYFFAEGFKVPVTWVFNR*
Ga0134087_102103492	3300012977	Grasslands Soil	LQIIATHLGLAPFTSPAPNSPIHANPRRNAAYFFAEGFKVPVTWLFNR*
Ga0134075_100816023	3300014154	Grasslands Soil	ARRLGLTPYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWAFQH*
Ga0134075_102653051	3300014154	Grasslands Soil	RIIARRLGLTPYTSPAAGSPIHANVRRNTGYLFAEGFKVPFTWMFQH*
Ga0134079_100858473	3300014166	Grasslands Soil	RLQIIAARLGLVPFTSPAPGSPIHANVRRNTGYLFAEGFKVPFTWLFQR*
Ga0137405_14223945	3300015053	Vadose Zone Soil	LRDGWADAYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR*
Ga0134089_105245912	3300015358	Grasslands Soil	LRLQIIATHLGLAPFTSPAPNSPIRSNPRRNAAYYFAEGFKVPVTWIFNR*
Ga0132258_117619693	3300015371	Arabidopsis Rhizosphere	LQIIAARLGLAGFTSPAPNSPIRSNPRRNAAYFLAEGFKVPITWIFNR*
Ga0132256_1029140372	3300015372	Arabidopsis Rhizosphere	HMLRLQIIAKRQGLVPYTSPATGSPIHASLRRNTGYLFAEGFKVPFTWLFQH*
Ga0132257_1011269033	3300015373	Arabidopsis Rhizosphere	KRQGLVPYTSPATGSPIHASLRRNTGYLFAEGFKVPFTWLFQH*
Ga0134083_103582952	3300017659	Grasslands Soil	FTSPATNSPIHANPRRNTAYMLAEGVKVPVAWLFQH
Ga0184610_11989892	3300017997	Groundwater Sediment	IIARRLGLVPYTSPATGSPIHANLRRNTGYLFAEGFKVPFTWLFQH
Ga0187773_112291241	3300018064	Tropical Peatland	PYTSPATDSPIHASARRNTGYLFAEGFKVPFTWLFQR
Ga0184618_100532961	3300018071	Groundwater Sediment	RRLGLTPYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR
Ga0066655_100529414	3300018431	Grasslands Soil	FTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0066655_100667171	3300018431	Grasslands Soil	RLGLVPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPLTWAFNR
Ga0066667_112045292	3300018433	Grasslands Soil	PFTSPAPNSPIRSSPRRNASYLFAEGFKVPVTWLFNR
Ga0066662_123965551	3300018468	Grasslands Soil	LRLRIIASRLGLMPFTSPAPNSPIRSNPRRNAAYFLTEGFKVPVTWLFNR
Ga0190274_127106532	3300018476	Soil	LGLAPFTSPVASSPIRSNPRLNASYLLVEGLKVPVTWIFQH
Ga0066669_110158872	3300018482	Grasslands Soil	VPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0193713_10039861	3300019882	Soil	TPYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR
Ga0193755_10277751	3300020004	Soil	LGLVPFTSPVPNSPIRSNPRLNASYLLVEGVKVPVTWLFQR
Ga0179592_100911771	3300020199	Vadose Zone Soil	ATRLGLLPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWIFNR
Ga0247665_10033763	3300024219	Soil	TRLGLAPFTSPAPNSPIRSNPRRNAAYYFAEGFKVPITWIFNR
Ga0209109_105297362	3300025160	Soil	VLAARLALEPYTSPAPESPITANRRRHVAYVAAEGIKVPLTWLFQR
Ga0209640_113691741	3300025324	Soil	TPLTSPAPGSPIRASMRRNTAYLLAEGFKVPFTWLFQH
Ga0209751_105875972	3300025327	Soil	PYTSPATGSPIHANLRRNTGYLFAEGFKVPFAWLFQH
Ga0207693_108675681	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LKILATRQGLVPFTSPAPGSPIRANPRRNAAYFLAEGLKVPVTWLFNH
Ga0209350_10276011	3300026277	Grasslands Soil	LLPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWVFNR
Ga0209234_10602963	3300026295	Grasslands Soil	LVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0209235_11673291	3300026296	Grasslands Soil	GLLPFTSPAPNSPIRSNPRRNAAYFLAEGFKVPVTWIFNR
Ga0209237_10234176	3300026297	Grasslands Soil	PYTSPAPGSPIRASPRRNAGFILAEGIKVPIAWLFQH
Ga0209236_10266635	3300026298	Grasslands Soil	LGLAPFTSPATNSPIHANPRRNTAYMLAEGVKVPVAWLFQH
Ga0209027_10937363	3300026300	Grasslands Soil	LATRLGLVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0209238_12610531	3300026301	Grasslands Soil	MLRLQIIASRLGLMPFTSPAPGSPIHANARRNTGYLFAEGFKVPFTWLFQR
Ga0209688_10229853	3300026305	Soil	RLKIIATRLGLVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0209471_12499432	3300026318	Soil	TSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0209377_10038731	3300026334	Soil	LGLVPFTSPTPNSPIHANPRLNAGYLLAEGVKVPLTWLFQH
Ga0209377_12275601	3300026334	Soil	LGLVPFTSPAPNSPIRANPRRNAAYFFAEGFKVPVTWLFNR
Ga0209058_13026581	3300026536	Soil	LRLKIIATRLGLVPFTSPAPGSPIRSNPRRNAAYFLAEGLKVPVTWLFNH
Ga0209376_10923623	3300026540	Soil	FTSPAPGSPIHANARRNTGYLFAEGFKVPFTWLFQR
Ga0209161_100086931	3300026548	Soil	PFTSPTPSSPIHANPRLNAAYLLAEGVKVPLTWLFQH
Ga0209161_100116907	3300026548	Soil	LIATRLGLVPFTSPAPNSPIRANLRRNAAYFFAEGFKVPVTWLLNR
Ga0209161_104149681	3300026548	Soil	LRLRIIATRLGLQPFTSPAPNSPIRSNPRRNAAYFLTEGFKVPVTWLFNR
Ga0209648_106409561	3300026551	Grasslands Soil	IAYTSPAPGSPIRANPRRNAVYMLSEGFKVPITWLLDR
Ga0179587_108120961	3300026557	Vadose Zone Soil	DHRGLIAYTSPAPGSPIRANPRRNAAYTLSEGFKVPITWLLDR
Ga0209178_12860522	3300027725	Agricultural Soil	QIIASRLGLAPFTSPAPNSPIRSNPRRNAAYYFAEGFKVPVTWIFNR
Ga0209811_102075381	3300027821	Surface Soil	HMLRLEIIAERLGLTPYTSPATGSPIHANVRRNTGYLFAEGFKVPVTWLFQR
Ga0209283_109472391	3300027875	Vadose Zone Soil	MLRLRIIARRLGLTPYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR
Ga0307301_100801353	3300028719	Soil	ARRLGLTPYTSPATGSPIHANVRRNAGYLFAEGFKVPFTWLFQR
Ga0307504_101831772	3300028792	Soil	LPFTSPAPNSPIRSNPRRNAAYFFAEGFKVPVTWVFNR
Ga0307473_108027882	3300031820	Hardwood Forest Soil	RLGLLPFTSPAPNSPIRSNPRRNVTYFLAEGFKVPVTWLFNR
Ga0307471_1004072581	3300032180	Hardwood Forest Soil	AYTSPTPSSPIRSNTRLNAGYLLTEGVKVPITWLFQR
Ga0307471_1005733383	3300032180	Hardwood Forest Soil	TSPAPGSPIRANPRRNAAYFLAEGLKVPVTWLFNH
Ga0307472_1019230251	3300032205	Hardwood Forest Soil	MLRLRIIAERLDLTPYTSPAPGSPIHANVRRNTGYLFAEGFKVPITWLFQR
Ga0214472_106500051	3300033407	Soil	LVPLTSPAPGSPIRANLRRNTTYLLAEGFKVPFTWLFQH
Ga0326729_10713471	3300033432	Peat Soil	LRLKIIAARLGLVPFTSPVPNSPIRSNLRLNASYLLVEGLKVPVTWLFQH