Metagenome / Metatranscriptome Family F064545

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064545
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	59 residues
Representative Sequence	VQVYALTSSQLLHETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRIVSAN
Number of Associated Samples	90
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.91 %
% of genes near scaffold ends (potentially truncated)	21.88 %
% of genes from short scaffolds (< 2000 bps)	84.38 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.094 % of family members)
Environment Ontology (ENVO)	Unclassified (36.719 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.09% β-sheet: 19.77% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00102	Y_phosphatase	2.34
PF04278	Tic22	1.56
PF01527	HTH_Tnp_1	1.56
PF00089	Trypsin	1.56
PF06803	DUF1232	1.56
PF13683	rve_3	0.78
PF06114	Peptidase_M78	0.78
PF03772	Competence	0.78
PF00069	Pkinase	0.78
PF09851	SHOCT	0.78
PF05711	TylF	0.78
PF08240	ADH_N	0.78
PF00202	Aminotran_3	0.78
PF00857	Isochorismatase	0.78
PF10502	Peptidase_S26	0.78
PF04545	Sigma70_r4	0.78
PF09285	Elong-fact-P_C	0.78
PF03063	Prismane	0.78
PF13365	Trypsin_2	0.78
PF01814	Hemerythrin	0.78
PF14534	DUF4440	0.78
PF13289	SIR2_2	0.78
PF01381	HTH_3	0.78
PF00144	Beta-lactamase	0.78
PF07332	Phage_holin_3_6	0.78
PF06271	RDD	0.78
PF00589	Phage_integrase	0.78
PF13360	PQQ_2	0.78
PF04191	PEMT	0.78
PF00011	HSP20	0.78
PF01828	Peptidase_A4	0.78
PF07849	DUF1641	0.78
PF13651	EcoRI_methylase	0.78
PF04984	Phage_sheath_1	0.78
PF13191	AAA_16	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG2453	Protein-tyrosine phosphatase	Signal transduction mechanisms [T]	2.34
COG5599	Protein tyrosine phosphatase	Signal transduction mechanisms [T]	2.34
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.56
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG1151	Hydroxylamine reductase (hybrid-cluster protein)	Energy production and conversion [C]	0.78
COG1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	Energy production and conversion [C]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.78
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.78
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.78
COG2427	Uncharacterized conserved protein YjgD, DUF1641 family	Function unknown [S]	0.78
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.47 %
Unclassified	root	N/A	43.75 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.47 %
Unclassified	root	N/A	43.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.25 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.56 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.78 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	1.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.78 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.78 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	1.56 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.78 %
unclassified Nitriliruptor	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor	1.56 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.78 %
Nitriliruptor sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor → Nitriliruptor sp.	1.56 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402GWYH5	Not Available	516	Open in IMG/M
2170459014\|G1P06HT02FQ6Q3	Not Available	611	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1864541	Not Available	523	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101229509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300000956\|JGI10216J12902_101867683	Not Available	3363	Open in IMG/M
3300000956\|JGI10216J12902_102006522	Not Available	2104	Open in IMG/M
3300000956\|JGI10216J12902_102256060	All Organisms → cellular organisms → Bacteria	5685	Open in IMG/M
3300000956\|JGI10216J12902_102919832	Not Available	1614	Open in IMG/M
3300000956\|JGI10216J12902_103261180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300000956\|JGI10216J12902_108593012	Not Available	1181	Open in IMG/M
3300000956\|JGI10216J12902_108911572	Not Available	1102	Open in IMG/M
3300000956\|JGI10216J12902_112407780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	549	Open in IMG/M
3300000956\|JGI10216J12902_119630813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300001536\|A1565W1_10079006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300001537\|A2065W1_10159831	Not Available	1016	Open in IMG/M
3300001537\|A2065W1_10616697	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300001537\|A2065W1_11141958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300001538\|A10PFW1_10059059	Not Available	542	Open in IMG/M
3300001538\|A10PFW1_10145329	Not Available	655	Open in IMG/M
3300004114\|Ga0062593_101142470	Not Available	812	Open in IMG/M
3300004114\|Ga0062593_102332371	Not Available	602	Open in IMG/M
3300004479\|Ga0062595_100266102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300004479\|Ga0062595_100984277	Not Available	722	Open in IMG/M
3300004479\|Ga0062595_102036561	Not Available	556	Open in IMG/M
3300005181\|Ga0066678_10401410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300005364\|Ga0070673_100959376	Not Available	795	Open in IMG/M
3300005439\|Ga0070711_100050561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2851	Open in IMG/M
3300005440\|Ga0070705_100408917	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005444\|Ga0070694_100105920	Not Available	1996	Open in IMG/M
3300005455\|Ga0070663_100482497	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005468\|Ga0070707_100019971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6317	Open in IMG/M
3300005468\|Ga0070707_100170775	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300005518\|Ga0070699_100006710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10010	Open in IMG/M
3300005558\|Ga0066698_10154961	Not Available	1550	Open in IMG/M
3300005615\|Ga0070702_101221040	Not Available	607	Open in IMG/M
3300006796\|Ga0066665_11652222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009012\|Ga0066710_100478123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1873	Open in IMG/M
3300009012\|Ga0066710_102368354	Not Available	771	Open in IMG/M
3300009088\|Ga0099830_10390546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1124	Open in IMG/M
3300009137\|Ga0066709_100891716	Not Available	1295	Open in IMG/M
3300009137\|Ga0066709_100989560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1231	Open in IMG/M
3300009148\|Ga0105243_11041423	Not Available	823	Open in IMG/M
3300010321\|Ga0134067_10311578	Not Available	610	Open in IMG/M
3300011003\|Ga0138514_100066571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300011119\|Ga0105246_10600176	Not Available	951	Open in IMG/M
3300011270\|Ga0137391_10369662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1230	Open in IMG/M
3300011270\|Ga0137391_10637835	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300011991\|Ga0120153_1007338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3224	Open in IMG/M
3300011994\|Ga0120157_1030466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300011996\|Ga0120156_1039428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300012003\|Ga0120163_1038413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300012010\|Ga0120118_1013273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2324	Open in IMG/M
3300012011\|Ga0120152_1064216	Not Available	1130	Open in IMG/M
3300012019\|Ga0120139_1041210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1087	Open in IMG/M
3300012189\|Ga0137388_11376178	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012198\|Ga0137364_10026044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3673	Open in IMG/M
3300012199\|Ga0137383_10122994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1893	Open in IMG/M
3300012200\|Ga0137382_10563182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300012200\|Ga0137382_10861286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012201\|Ga0137365_10005625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10028	Open in IMG/M
3300012208\|Ga0137376_10630326	Not Available	927	Open in IMG/M
3300012208\|Ga0137376_10732601	Not Available	852	Open in IMG/M
3300012208\|Ga0137376_10950936	Not Available	737	Open in IMG/M
3300012209\|Ga0137379_10458234	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300012210\|Ga0137378_10142829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2216	Open in IMG/M
3300012210\|Ga0137378_10198014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1869	Open in IMG/M
3300012211\|Ga0137377_10260759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor → Nitriliruptor sp.	1664	Open in IMG/M
3300012211\|Ga0137377_10354984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300012211\|Ga0137377_11208733	Not Available	686	Open in IMG/M
3300012285\|Ga0137370_10090625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → unclassified Nitriliruptor → Nitriliruptor sp.	1709	Open in IMG/M
3300012350\|Ga0137372_10382737	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300012351\|Ga0137386_10868949	Not Available	647	Open in IMG/M
3300012353\|Ga0137367_10735757	Not Available	686	Open in IMG/M
3300012357\|Ga0137384_11445921	Not Available	536	Open in IMG/M
3300012359\|Ga0137385_10361253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1242	Open in IMG/M
3300012359\|Ga0137385_11450584	Not Available	550	Open in IMG/M
3300012359\|Ga0137385_11601063	Not Available	515	Open in IMG/M
3300012975\|Ga0134110_10467450	Not Available	569	Open in IMG/M
3300013763\|Ga0120179_1051676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300013765\|Ga0120172_1072707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300013766\|Ga0120181_1007294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3378	Open in IMG/M
3300013772\|Ga0120158_10304681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300014052\|Ga0120109_1011747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1925	Open in IMG/M
3300014052\|Ga0120109_1164729	Not Available	518	Open in IMG/M
3300018028\|Ga0184608_10110560	Not Available	1156	Open in IMG/M
3300018061\|Ga0184619_10174443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300018071\|Ga0184618_10017021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2317	Open in IMG/M
3300018071\|Ga0184618_10108037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300018071\|Ga0184618_10147237	Not Available	960	Open in IMG/M
3300018071\|Ga0184618_10361626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300018482\|Ga0066669_12151644	Not Available	528	Open in IMG/M
3300019361\|Ga0173482_10310529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300019887\|Ga0193729_1000031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66676	Open in IMG/M
3300019888\|Ga0193751_1051233	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300021080\|Ga0210382_10037682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1850	Open in IMG/M
3300021080\|Ga0210382_10077302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1357	Open in IMG/M
3300021080\|Ga0210382_10093151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300021344\|Ga0193719_10050547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1801	Open in IMG/M
3300022694\|Ga0222623_10033286	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300022756\|Ga0222622_10800577	Not Available	688	Open in IMG/M
3300025898\|Ga0207692_10845556	Not Available	600	Open in IMG/M
3300025922\|Ga0207646_10019162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6362	Open in IMG/M
3300025922\|Ga0207646_10304914	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300025960\|Ga0207651_10919225	Not Available	780	Open in IMG/M
3300027862\|Ga0209701_10077116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2103	Open in IMG/M
3300028710\|Ga0307322_10177624	Not Available	575	Open in IMG/M
3300028711\|Ga0307293_10185768	Not Available	662	Open in IMG/M
3300028711\|Ga0307293_10187151	Not Available	659	Open in IMG/M
3300028715\|Ga0307313_10180988	Not Available	653	Open in IMG/M
3300028718\|Ga0307307_10027999	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300028744\|Ga0307318_10119059	Not Available	899	Open in IMG/M
3300028755\|Ga0307316_10087776	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300028771\|Ga0307320_10143820	Not Available	921	Open in IMG/M
3300028784\|Ga0307282_10073152	Not Available	1561	Open in IMG/M
3300028784\|Ga0307282_10455553	Not Available	621	Open in IMG/M
3300028811\|Ga0307292_10510577	Not Available	516	Open in IMG/M
3300028814\|Ga0307302_10342648	Not Available	737	Open in IMG/M
3300028819\|Ga0307296_10523087	Not Available	649	Open in IMG/M
3300028828\|Ga0307312_10326807	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300028878\|Ga0307278_10000003	All Organisms → cellular organisms → Bacteria	200745	Open in IMG/M
3300028878\|Ga0307278_10029177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2530	Open in IMG/M
3300028878\|Ga0307278_10066250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1629	Open in IMG/M
3300028878\|Ga0307278_10244898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300028884\|Ga0307308_10135941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300028885\|Ga0307304_10078489	Not Available	1282	Open in IMG/M
3300031093\|Ga0308197_10339815	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031740\|Ga0307468_100167220	Not Available	1439	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.31%
Host-Associated	Host-Associated	3.91%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.72%
Aquatic	Environmental → Aquatic	8.59%
Plants	Host-Associated → Plants	3.91%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.94%
Sediment	Environmental → Aquatic → Sediment	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.91%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.12%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.91%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	14.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_03922310	2070309009	Soil	MKVYALTSSQSPSETLDLFLSREAAEAELREILEDERDWVNVLSVVPIELDGQKISVN
2PV_02753990	2170459014	Switchgrass, Maize And Mischanthus Litter	MRFYALTSSQCLHETLDLFLSRDAVEAELREILQDEPDWKDVLRVVRSSLDGGTCR
ICChiseqgaiiDRAFT_18645412	3300000033	Soil	MRPFERIVFVQVYALTSSRCLHEMLDLFLSREAAEAELREILGDEPDWKDVLRVVPIELEGRNVSAN*
INPhiseqgaiiFebDRAFT_1012295091	3300000364	Soil	VQVYALTSSQSLHETLDLFLTREAAAAELREILEDEPDWQDVLRVVPIELDGRNVSAN*
JGI10216J12902_1018676833	3300000956	Soil	VQVYALPSSLALREMLDLFLTREAAEAELREILENERDWEVLRVVPIDLDGRQMSAN*
JGI10216J12902_1020065226	3300000956	Soil	MQVYALTSSQSLRETLDLFLTREAAEAELREILGDEPDWKNVLRVVPIELDLRHVSEN*
JGI10216J12902_1022560602	3300000956	Soil	MRVYALSTSQSPNETLDLFLTREAAEAELGEILLDEPDWRTVLRVVPIELEAGNVSAN*
JGI10216J12902_1029198322	3300000956	Soil	MALSPGVSSSQSPRETLDLFVTREAAEAELREILEDQSDWKDVLRVVPIELDGRVASVN*
JGI10216J12902_1032611802	3300000956	Soil	MQVYAVTSSQSPNETLDLFVTREAAEAELREILEDEPDWKDVLRVMPIELDGRNVSEN*
JGI10216J12902_1085930121	3300000956	Soil	LASSEMLHETLDLFLTREAAEAELREILHDEPDWKEVLRVVPIELDGRNVPVN*
JGI10216J12902_1089115722	3300000956	Soil	MKVYALTSSQSPSETLDLFLSREAAEAELREILEDERDWVNVLSVVPIELDGQKISVN*
JGI10216J12902_1124077802	3300000956	Soil	PEPGRILVVRVYALTSSQSPRETLDLFITWDAAESELREILEDEPDWTDVLRVVPIELDEKQLSDN*
JGI10216J12902_1196308132	3300000956	Soil	MQVYALTSSQCLYETLDLFLTREAAEAELRDILQDEPDWKDVLRIVPIELDGRHTSMN*
A1565W1_100790061	3300001536	Permafrost	VRVYALTSSQVAGETLDLFLTRGAAEAELREILEDEPGWASILSVVPIELDERDVSAN
A2065W1_101598311	3300001537	Permafrost	MRVYALTSSQMRGETLDLFLTREAAESELAEILHDEPEWVDVLGVVAIELDERDVSVN*
A2065W1_106166972	3300001537	Permafrost	VQVFALTSSQLISQTLDLFLTREAVERSYEILEDEPEWVNVLRVVPIALDGRELSAN*
A2065W1_111419582	3300001537	Permafrost	VRVYALASSHVPHETLDLFLTEEAAEAELREILEDEPEWVNVLRVVPIELDERDVSVN*
A10PFW1_100590591	3300001538	Permafrost	MRVYALASSHVPDETLDLFLTEEAAEAELREILQDEPGWVDVLSVVPIELDERSV
A10PFW1_101453291	3300001538	Permafrost	AKTLRMGLRPGRILLVRVYALTSSQVVGETLDLFLTREAAEAELREILLDEPKWKDVLRVVPIGPDLSAN*
Ga0062593_1011424701	3300004114	Soil	MMLIYALTSSQSLHETLDLFLTREAAEEILEDDPPLEDVLRVVPIALDGRQMSAN*
Ga0062593_1023323711	3300004114	Soil	VQVYALTGSQCLYETLDLFLTREAAEAELHEILEDEPDWKDVLRVVLIELDERAISEN*
Ga0062595_1002661023	3300004479	Soil	VLVYALTSSQSLHETLDLFLTREAAEKELREILEDEPDRKDMLRGAIELDGREMSAN*
Ga0062595_1009842771	3300004479	Soil	VHVYALTSSQVPHETLNLFMSREAAEAELREILEDEPQWVNVLRVVPIELDGRNLSGN*
Ga0062595_1020365611	3300004479	Soil	VLVHIYALTSSQSPRETLDLFLTREAAEAELREILEDEPDWRDMLRVVPIE*
Ga0066678_104014102	3300005181	Soil	MQVYALTSSQSLHETLDLFFTREAAEAELREILEDEPDWRDVLRVVPIKLDGRNVSAN*
Ga0070673_1009593761	3300005364	Switchgrass Rhizosphere	MQVYALTSSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0070711_1000505616	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSIAVAPGLERSHRMQVYALTSSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0070705_1004089171	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	YALTSSHIPDETLDLFLIGEAPETELQAILEDEPEWVNVVRVVPIELDARHTSP*
Ga0070694_1001059201	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VSIEAGAGVGASHRMQVYALTNSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0070663_1004824971	3300005455	Corn Rhizosphere	GLERSHRMQVYALTSSRLASETLDLFLTREAAEAELHEILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0070707_1000199716	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYALTSSQLLHETLDLFLTRDAAEEELREILLDQPDWKDVLRVVPIELDEQNVSPN*
Ga0070707_1001707752	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYALTSSLCLHETLDLFVTREAADAELSEILEDEPDWKDVLRVVPIELTLPTLCVIR*
Ga0070699_1000067109	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYALTSSQLLHETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRIVSAN*
Ga0066698_101549612	3300005558	Soil	MQVYALASSQLLHETLDLFLTREAAEAELREILRDEPDWKDVLRIVPIELDERDVSAN*
Ga0070702_1012210401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VIQVYALTSSHIPDETLDLFLIGEAPETELQAILEDEPEWVNVVRVVPIELDARHTSP*
Ga0066665_116522222	3300006796	Soil	VQVYALTTQSLLETLDLFLTREAAEAELREILHDEPDWKDVLRVVPIELDERDVSPN*
Ga0066710_1004781234	3300009012	Grasslands Soil	LSRSREVQVYALTTQSLLETLDLFLTREAAEAELREILHDEPDWKDVLRVVPIELDERDVSPN
Ga0066710_1023683542	3300009012	Grasslands Soil	VVHVYALTSSQVVEKTLDLFLTQQAAEAAPREILNDEPDWKDVLRVVPIELDGPDLSTN
Ga0099830_103905463	3300009088	Vadose Zone Soil	VQVYALTSTQLLHETLDLFLTREAAETELREILQDEPDWKEVLRVIPIELDERDLSAN*
Ga0066709_1008917161	3300009137	Grasslands Soil	VRVYALTSSEMLHETLDLFLTREAAEAELREIIEGERGWKDVLGVVPIELDGRQMSAI*
Ga0066709_1009895602	3300009137	Grasslands Soil	VQVHALTISQCLYGTLDIFLTREAAEAELREILEDEPDWKDVVRVVPIELDQRHVSAS*
Ga0105243_110414232	3300009148	Miscanthus Rhizosphere	MQVYALTNSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0134067_103115781	3300010321	Grasslands Soil	MQVYALTSSQSLHETLDLFLTRDAAEAELREIEDEPDWKDVLRVVPIKLDGRNVSAN*
Ga0138514_1000665711	3300011003	Soil	MILLVQVYALTSSQVAGETLDLFLTQEAAEAELREILEDEPEWVNVLRVVPIELDGRTLSAN*
Ga0105246_106001761	3300011119	Miscanthus Rhizosphere	MQVYALTSSRLASETLDLFLTREAAEAELHEILEDEPEWVNVLRVVPIELDGRELSVN*
Ga0137391_103696623	3300011270	Vadose Zone Soil	VRVYALASSRVAGETLDLFVSREAAEAELQEILQDEPGWVNVLSVVPIEFDEGDISAN*
Ga0137391_106378352	3300011270	Vadose Zone Soil	VQVYALTSTQLLHETLDLFLTREAAETELREILLDEPDWKEVLRVIPIELDERDLSAN*
Ga0120153_10073382	3300011991	Permafrost	MRVYALASSHVPDETLDLFLTEEAAEAELREILQDEPGWVDVLSVVPIELDERSVSVN*
Ga0120157_10304661	3300011994	Permafrost	VQVYALTSSHLRGETLDLFLTREAAQAELREILQDEPGWVDVLRVEPIRLDAQRSSSN*
Ga0120156_10394283	3300011996	Permafrost	VQVFALTSSQLISETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIKLDGRNSSTN*
Ga0120163_10384131	3300012003	Permafrost	QQSMRVYALASSHVPDETLDLFLTEEAAEAELREILQDEPGWVDVLSVVPIELDERSVSVN*
Ga0120118_10132732	3300012010	Permafrost	MRVXXXXVYALASSHVPDETLDLFLTEEAAEAELREILQDEPGWVDVLSVVPIELDERSVSVN*
Ga0120152_10642163	3300012011	Permafrost	LTSSHVPGETLDLFLTREAAEAELREILQDEPDWKDVLRVEPIRLDAQQHPLTRNQLV
Ga0120139_10412101	3300012019	Permafrost	VYALISSQVAGETLDLFLTREAAEAELREILEDEPNWKDVLHVVPIELDGRDVSAN*
Ga0137388_113761781	3300012189	Vadose Zone Soil	LAQVYALTSTQLLHETLDLFLTRAAAEKELREILLDEPDWDDMLRVIPIEPDERDVSAN*
Ga0137364_100260445	3300012198	Vadose Zone Soil	VRVYALTSSQSLHKTLDLFLTREAAEAELREILHDEPDWREVLRVVPIELDGRNVSAN*
Ga0137383_101229942	3300012199	Vadose Zone Soil	MQVYALTSSQSLHETLDLFLTREAAEAELQEILVDEPDWKDVLRVVPIELDGRQMSAN*
Ga0137382_105631821	3300012200	Vadose Zone Soil	VVGWEDPIRLQLYALTSTQLAGETLDLFLTQEAAEAELREILEDEPDWKDVLRVVPIELDGRNLSAN*
Ga0137382_108612861	3300012200	Vadose Zone Soil	MQVYALTSSQLRRETLDLFSTREAAESELREILVDEPDWKDVLGVVPIELDGRQMSRTRE
Ga0137365_100056256	3300012201	Vadose Zone Soil	VQVYALTTSQLLHETLDLFLTKEAAERELREILLDEPDWKDVLRVVPIELDERSVSPN*
Ga0137376_106303262	3300012208	Vadose Zone Soil	VQVYALTSSQIHGETLDLFLSKEATERELRELLLDEPDWKDVLRVAPIELDAQNLSAN*
Ga0137376_107326013	3300012208	Vadose Zone Soil	VGKARSSIQVYAITSTQIAGETLDLFLTQEAAEAELREILEDEPEWVNVLRVVPNRA*
Ga0137376_109509361	3300012208	Vadose Zone Soil	MRVYALTSSQLRDETLDILLTREAAEAELREILLDGPDWRDVLSVIPIELDGREVSAN*
Ga0137379_104582343	3300012209	Vadose Zone Soil	SGLVQVYALSSSQLPNETLDLFVSRQAAEAELLEILEDEPEWVNVLRIVSIELDERDVSAN*
Ga0137378_101428291	3300012210	Vadose Zone Soil	MQVYALLTCSQSLHETLDLFLTREAAEAELREILQDEADWRDVLRVVPIELDARNLSAN*
Ga0137378_101980143	3300012210	Vadose Zone Soil	VQVYALSSSQLPNETLDLFVSRQAAEAELLEILEDEPEWVNVLRIVSIELDERDVSAN*
Ga0137377_102607593	3300012211	Vadose Zone Soil	VRVYALTSSQSLHETLDLFLTREAAEAESREILHDEPDWREVLRVVPIELDGRNVSAN*
Ga0137377_103549841	3300012211	Vadose Zone Soil	MQLYALTSTQLAGETLDLFLTQEAAEAELREILEDEPDWKDVLRVVPIELDGRNLSAN*
Ga0137377_112087331	3300012211	Vadose Zone Soil	MQVYALTSSQSLHETLDLFLTREAAEAELREIEDEPDWKDVLRAVPIKLDGRNVSAN*
Ga0137370_100906253	3300012285	Vadose Zone Soil	RVLATRTACENPLVRVYALTSSQSLHKTLDLFLTREAAEAELREILHDEPDWREVLRVVPIELDGRNVSAN*
Ga0137372_103827372	3300012350	Vadose Zone Soil	VRVYALASSHIPDETLDLFLTREAAEDELREILPDGPEWVNVLRVVPIELDGRHLSAN*
Ga0137386_108689491	3300012351	Vadose Zone Soil	MQVYALTSSQSLHETLDLFLTREAAEAELQEILVDEPGWKDVLRVVPIELDGRQMSAN*
Ga0137367_107357571	3300012353	Vadose Zone Soil	MPLGATPGRILRMQVYALASTQIRGETLDLFLTREAAETELREILEDEPEWANVLHVMPIELDGRNLSAN*
Ga0137384_114459211	3300012357	Vadose Zone Soil	VQVYALTSSQIHGETLDLFLTKEAAERELREILLDEPDWKDVLRVVPLDLDDRNVSPN*
Ga0137385_103612532	3300012359	Vadose Zone Soil	VKVYAVTSTQVAGGKPDLFLTKEAADTELREIRGDEPEWVNVLRVVPIELDER
Ga0137385_114505841	3300012359	Vadose Zone Soil	VRVYALTSSQSLHETLDLFLTREAAEAELREILEDEPDWKDVLRVMPIELDGRQM
Ga0137385_116010631	3300012359	Vadose Zone Soil	SSSQLPNETLDLFVSRQAAEAELLEILEDEPEWVNVLRIVSIELDERDVSAN*
Ga0134110_104674502	3300012975	Grasslands Soil	MQVYALTSSQSLHETLDLFLTRETAEAELREILVDEPDWKDVVRVVPIELDGRKVSENLLVRRILVAATLLL
Ga0134076_105537691	3300012976	Grasslands Soil	LLPSRRAASENPPIQFYALTSSQSLHETLDLFLTREAEADLREILEDEPDWKDVLRVVPIELDGRNLSLN*
Ga0120179_10516761	3300013763	Permafrost	VQVFALTSSQLISQTLGLFLTREAAEAELREILEDEPEWVNVLRVVPIKLDGRNSSTN*
Ga0120172_10727072	3300013765	Permafrost	VRVYALTSSQVVGETLDLFLTREAAEAELREILLDEPKWKDVLRVVPIGPDLSAN*
Ga0120181_10072944	3300013766	Permafrost	ALAPCGGRWRFRLQSMRVYALASSHVPDETLDLFLTEEAAEAELREILQDEPGWVDVLSVVPIELDERSVSVN*
Ga0120158_103046812	3300013772	Permafrost	VRVYALSSSQSLRETLDLFLTREAAEAELREILQDEPDWRDVLRVVPIELDCRNVSEN*
Ga0120109_10117471	3300014052	Permafrost	MRVYALASSHIPDETLDLFLTRGAAEAELREILLDEPDWKDVLRVVPITLFT*
Ga0120109_11647291	3300014052	Permafrost	MKVYALASSHVPSRTLDLFLTCEAAEAELEEILEDEPDWKDVLRSSFN*
Ga0184608_101105601	3300018028	Groundwater Sediment	LQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPEWVNVLRVVPIELHGRDLSAN
Ga0184619_101744432	3300018061	Groundwater Sediment	VQVYALTSTQIAGETLDLFLTQEAAEAELREILEDEPEWVNVLRVVPIELDGRTLSAN
Ga0184618_100170216	3300018071	Groundwater Sediment	VRVYALTSTQVAGETLDLFLTQDAAEAELREILEDEPDWVNVLRVVPIEARREMSEN
Ga0184618_101080372	3300018071	Groundwater Sediment	VQVYAFTTTQLLHETLDLFLTREAAETELREILLDEPDWKDVLRVIPIELDERDVSAN
Ga0184618_101472372	3300018071	Groundwater Sediment	MTLGRRLARIQLMRVYALANSHVPDETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIEFDGRDLST
Ga0184618_103616262	3300018071	Groundwater Sediment	TSSHLLHETLDLFLTREDAEAELREILLDEPDWRDVLRVVPIELDERDMSEN
Ga0066669_121516441	3300018482	Grasslands Soil	MMQVYALTSSQLLHETLDLFVTREAAEAELREILLDEPDWKDVLRVVPIELD
Ga0173482_103105292	3300019361	Soil	LQRFASLQVYALTSSQSLHETLDLFLTREATEAELREILEDEPDWRDVLRVVPIELDGRNVSAN
Ga0193729_10000315	3300019887	Soil	VQVYALTSSRLLHETLDLFLTRGAAETELREILEDEPDWKDVLRVAPIDLDERQLSEN
Ga0193751_10512332	3300019888	Soil	VQVFALTSSQLISETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIALDGRGLSAS
Ga0210382_100376823	3300021080	Groundwater Sediment	VQVYALTSSHLLHETLDLFLTREDAEAELREILLDEPDWRDVLRVVPIELDERDMSEN
Ga0210382_100773023	3300021080	Groundwater Sediment	LVRVYALTSTQVAGETLDLFLTQDAAEAELREILEDEPDWVNVLRVVPIEARREMSEN
Ga0210382_100931512	3300021080	Groundwater Sediment	VHVYALTSSHVPDETFDLFLTQEAAEAELREILEDEPEWVNVLRVVPIEFDGRDLSTN
Ga0193719_100505471	3300021344	Soil	VQVYAFTTTQLLHETLDLFLTREAAETELREILLDEPDWNELLRVVPIELDERDVSAN
Ga0222623_100332861	3300022694	Groundwater Sediment	LQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPEWVNVLRVVPIELDGRDLSAN
Ga0222622_108005771	3300022756	Groundwater Sediment	FAPTVRSSHRLQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPEWVNVLRVVPIELHGRDLSAN
Ga0207692_108455561	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MQVYALTNSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN
Ga0207646_100191625	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYALTSSQLLHETLDLFLTRDAAEEELREILLDQPDWKDVLRVVPIELDEQNVSPN
Ga0207646_103049142	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYALTSSLCLHETLDLFVTREAADAELSEILEDEPDWKDVLRVVPIELTLPTLCVIR
Ga0207651_109192251	3300025960	Switchgrass Rhizosphere	MQVYALTSSRLVSETLDLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN
Ga0209701_100771161	3300027862	Vadose Zone Soil	DPHLQEHAGLVQVYALTSTQLLHETLDLFLTREAAETELREILQDEPDWKEVLRVIPIELDERDLSAN
Ga0307322_101776241	3300028710	Soil	MQVYALTSSRLVSETLNLFLTREAAEAELHEILEDEPEWVNVLRVVPIELDGRELSVN
Ga0307293_101857681	3300028711	Soil	MQVYALTSTRLRHETLDIFLTREAAEAELQEILEDEPDWKDVLRVVPIELDERDVSAN
Ga0307293_101871512	3300028711	Soil	VGRKDDLAVQVYALASAHVPRETLNLFLTEEAAEAELRDILEDEPESVNVVRVVPIELDGRDLSAN
Ga0307313_101809882	3300028715	Soil	VQVYALTSTQLLHETLDLFLTREAAETELREILLDEPDWKDVLRVIPIELDERDVSAN
Ga0307307_100279993	3300028718	Soil	YHFAPTVRSSHRLQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPEWVNVLRVVPIELHGRDLSAN
Ga0307318_101190591	3300028744	Soil	LLQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPEWVNVLRVVPIELHGRDLSAN
Ga0307316_100877763	3300028755	Soil	LQIYALTSSQLLRETLNLFLSREAAEAELQEILVDEPELVNVLRVVPIELHGRDLSAN
Ga0307320_101438201	3300028771	Soil	MQVYALTSTRLRHETLDIFLTREAAEAELQEILEDEPDWKDVLRVVPIELDESDVSAN
Ga0307282_100731521	3300028784	Soil	VQVYALASAHVPRETLNLFLTEEAAEAELRDILEDEPESVNVVRVVPIELDGRDLSAN
Ga0307282_104555531	3300028784	Soil	MQVYALTSSRLVSETLDLFLTREAADAELREILEDEPEWVNVLRVVPIELDGRELSVN
Ga0307292_105105771	3300028811	Soil	MQVYALTSSRLVSETLNLFLTREAAEAELREILEDEPEWVNVLRVVPIELDGRELSVN
Ga0307302_103426482	3300028814	Soil	VRPPERIPRCRSYALTSSRLLHGTLDLFLTEEAAEAELQEILVDEPEWLNVLRVVPIELDERDLSAN
Ga0307296_105230871	3300028819	Soil	MQVYALTSTRLRHETLDLFLTREDAEAELEEILEDEPEWVNVLRVVPIELDERDLPAN
Ga0307312_103268072	3300028828	Soil	VKVYALTSSKLLHETLDLFLTREAAEEELREILLDEPDWKEVLRVVPIELDERNVSAN
Ga0307278_10000003209	3300028878	Soil	VQVYALTSTQIASETLDLFLTQEAAEAELREILEDEPEWVNVLRVVPIELDGRSLSAN
Ga0307278_100291772	3300028878	Soil	MQVYVLTSSELLRETLDLFITREAAEDELEEVLPDEPDWKDVLRVVPIELDERNVSAN
Ga0307278_100662502	3300028878	Soil	MFDGQSCNDSSVEAYALTSSQCLYETLDLFLTEEAAETELHEILEDEPAWVNVLRVVPIQLDENRTSLN
Ga0307278_102448982	3300028878	Soil	VLVYALTSSQCLYETLDLLLTRDAAEAELREILEDEPQWVNVLRVVPIELDERDLSAN
Ga0307308_101359412	3300028884	Soil	VQVYAFTSTQLLHETLDLFLTQEAAETELREILLDEPDWKDVLRVIPIELDERNVSAN
Ga0307304_100784892	3300028885	Soil	MQLYALTSSQLPNETLDLFLTREAAEAELREILVDEPDWKDVLRVVPIELDGRDMSAN
Ga0308197_103398152	3300031093	Soil	VQVYALTSSNLPTETLDLFLTQEAAEAELREILEDEPEWVNVLRVVPIELNGRNVSAN
Ga0307468_1001672202	3300031740	Hardwood Forest Soil	VIQVYALTSSHIPDETLDLFLTGEAAETELQEILEDEPEWVNVVRVVSIELDAPHTSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064545

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences