Metagenome / Metatranscriptome Family F064544

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	68 residues
Representative Sequence	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKAEPSKQ
Number of Associated Samples	87
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.03 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	67.19 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (45.312 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.656 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.73% β-sheet: 0.00% Coil/Unstructured: 42.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF03264	Cytochrom_NNT	17.19
PF13442	Cytochrome_CBB3	10.16
PF07690	MFS_1	6.25
PF13435	Cytochrome_C554	3.12
PF13620	CarboxypepD_reg	3.12
PF13545	HTH_Crp_2	2.34
PF00005	ABC_tran	2.34
PF12704	MacB_PCD	2.34
PF13533	Biotin_lipoyl_2	1.56
PF13607	Succ_CoA_lig	1.56
PF00589	Phage_integrase	1.56
PF00196	GerE	1.56
PF10431	ClpB_D2-small	0.78
PF14537	Cytochrom_c3_2	0.78
PF13683	rve_3	0.78
PF00146	NADHdh	0.78
PF01261	AP_endonuc_2	0.78
PF13631	Cytochrom_B_N_2	0.78
PF05726	Pirin_C	0.78
PF09699	Paired_CXXCH_1	0.78
PF00356	LacI	0.78
PF02433	FixO	0.78
PF09397	FtsK_gamma	0.78
PF00027	cNMP_binding	0.78
PF09364	XFP_N	0.78
PF13602	ADH_zinc_N_2	0.78
PF00034	Cytochrom_C	0.78
PF00873	ACR_tran	0.78
PF05402	PqqD	0.78
PF02604	PhdYeFM_antitox	0.78
PF11854	MtrB_PioB	0.78
PF00106	adh_short	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	17.19
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.78
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.78
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.78
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.78
COG2993	Cbb3-type cytochrome oxidase, cytochrome c subunit FixO	Energy production and conversion [C]	0.78
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.12 %
Unclassified	root	N/A	21.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.94 %
Unclassified	root	N/A	21.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.19 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.19 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.03 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.03 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.19 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.19 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.78 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101589230	All Organisms → cellular organisms → Bacteria	4760	Open in IMG/M
3300001154\|JGI12636J13339_1008966	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300001867\|JGI12627J18819_10367714	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300002917\|JGI25616J43925_10044036	Not Available	1948	Open in IMG/M
3300004082\|Ga0062384_100440017	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300004091\|Ga0062387_100421950	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300004100\|Ga0058904_1390403	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300004631\|Ga0058899_10013086	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300005166\|Ga0066674_10114083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300005175\|Ga0066673_10016479	All Organisms → cellular organisms → Bacteria	3312	Open in IMG/M
3300005177\|Ga0066690_11011163	Not Available	522	Open in IMG/M
3300005332\|Ga0066388_100421788	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300005332\|Ga0066388_100617120	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300005446\|Ga0066686_10033867	All Organisms → cellular organisms → Bacteria	3009	Open in IMG/M
3300005451\|Ga0066681_10216080	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300005467\|Ga0070706_100458665	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005468\|Ga0070707_100036021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4721	Open in IMG/M
3300006031\|Ga0066651_10006970	All Organisms → cellular organisms → Bacteria	4435	Open in IMG/M
3300006034\|Ga0066656_10506957	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300006797\|Ga0066659_10060253	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300006800\|Ga0066660_10958688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	691	Open in IMG/M
3300006806\|Ga0079220_10427376	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009038\|Ga0099829_10002345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10854	Open in IMG/M
3300009038\|Ga0099829_10027325	All Organisms → cellular organisms → Bacteria	4018	Open in IMG/M
3300009088\|Ga0099830_10017868	All Organisms → cellular organisms → Bacteria	4548	Open in IMG/M
3300009088\|Ga0099830_10221791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300009088\|Ga0099830_10625619	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300009088\|Ga0099830_11299023	Not Available	605	Open in IMG/M
3300009088\|Ga0099830_11423917	Not Available	577	Open in IMG/M
3300009089\|Ga0099828_10026981	All Organisms → cellular organisms → Bacteria	4575	Open in IMG/M
3300009089\|Ga0099828_10117246	All Organisms → cellular organisms → Bacteria → Acidobacteria	2323	Open in IMG/M
3300009089\|Ga0099828_10142820	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300009089\|Ga0099828_10989525	Not Available	749	Open in IMG/M
3300009090\|Ga0099827_10080646	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300009090\|Ga0099827_10521716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300009143\|Ga0099792_10205411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300009792\|Ga0126374_10622986	Not Available	800	Open in IMG/M
3300010043\|Ga0126380_10970542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	713	Open in IMG/M
3300010048\|Ga0126373_10467451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300010337\|Ga0134062_10063589	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300010337\|Ga0134062_10106814	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300010360\|Ga0126372_11149102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300010361\|Ga0126378_10131411	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300010361\|Ga0126378_11928035	Not Available	673	Open in IMG/M
3300011120\|Ga0150983_13406584	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300011120\|Ga0150983_14207507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300011120\|Ga0150983_15547799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300011270\|Ga0137391_10037136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4117	Open in IMG/M
3300011271\|Ga0137393_10316462	Not Available	1330	Open in IMG/M
3300011271\|Ga0137393_10426487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300012189\|Ga0137388_10443631	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300012189\|Ga0137388_11917033	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300012198\|Ga0137364_10008089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5847	Open in IMG/M
3300012199\|Ga0137383_10103779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2066	Open in IMG/M
3300012199\|Ga0137383_10316625	Not Available	1142	Open in IMG/M
3300012199\|Ga0137383_10375827	Not Available	1041	Open in IMG/M
3300012201\|Ga0137365_10026323	All Organisms → cellular organisms → Bacteria → Acidobacteria	4490	Open in IMG/M
3300012201\|Ga0137365_11251474	Not Available	528	Open in IMG/M
3300012202\|Ga0137363_11370183	Not Available	597	Open in IMG/M
3300012205\|Ga0137362_10071866	All Organisms → cellular organisms → Bacteria → Acidobacteria	2866	Open in IMG/M
3300012206\|Ga0137380_10021191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5971	Open in IMG/M
3300012206\|Ga0137380_10045584	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300012206\|Ga0137380_10350290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300012206\|Ga0137380_10388166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1241	Open in IMG/M
3300012206\|Ga0137380_10497259	Not Available	1074	Open in IMG/M
3300012206\|Ga0137380_11401791	Not Available	583	Open in IMG/M
3300012207\|Ga0137381_10060970	All Organisms → cellular organisms → Bacteria	3134	Open in IMG/M
3300012207\|Ga0137381_10395994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300012207\|Ga0137381_11487980	Not Available	569	Open in IMG/M
3300012210\|Ga0137378_10311206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1465	Open in IMG/M
3300012211\|Ga0137377_10263781	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300012211\|Ga0137377_11193043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300012357\|Ga0137384_11604776	Not Available	500	Open in IMG/M
3300012685\|Ga0137397_10317481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300012685\|Ga0137397_10579188	Not Available	835	Open in IMG/M
3300012685\|Ga0137397_10716588	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012917\|Ga0137395_10728966	Not Available	717	Open in IMG/M
3300012929\|Ga0137404_10052808	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300014157\|Ga0134078_10016465	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300015053\|Ga0137405_1399469	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300015241\|Ga0137418_10710418	Not Available	769	Open in IMG/M
3300017975\|Ga0187782_10679602	Not Available	793	Open in IMG/M
3300018431\|Ga0066655_10056529	Not Available	2045	Open in IMG/M
3300018482\|Ga0066669_10158806	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300020004\|Ga0193755_1003669	All Organisms → cellular organisms → Bacteria → Acidobacteria	4884	Open in IMG/M
3300020170\|Ga0179594_10033960	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300020579\|Ga0210407_10025742	All Organisms → cellular organisms → Bacteria	4373	Open in IMG/M
3300020579\|Ga0210407_10587745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300020580\|Ga0210403_10393782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300020581\|Ga0210399_10000315	All Organisms → cellular organisms → Bacteria → Acidobacteria	39304	Open in IMG/M
3300021046\|Ga0215015_10347435	Not Available	1022	Open in IMG/M
3300021046\|Ga0215015_10348548	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300021046\|Ga0215015_10717492	Not Available	1322	Open in IMG/M
3300021178\|Ga0210408_10064594	All Organisms → cellular organisms → Bacteria → Proteobacteria	2860	Open in IMG/M
3300025910\|Ga0207684_10590817	Not Available	949	Open in IMG/M
3300026306\|Ga0209468_1013058	All Organisms → cellular organisms → Bacteria	3060	Open in IMG/M
3300026316\|Ga0209155_1034379	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300026323\|Ga0209472_1236467	Not Available	588	Open in IMG/M
3300026329\|Ga0209375_1075562	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300026343\|Ga0209159_1158530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300026377\|Ga0257171_1008722	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300026490\|Ga0257153_1017776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1448	Open in IMG/M
3300026490\|Ga0257153_1019570	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300026497\|Ga0257164_1063056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300026507\|Ga0257165_1033366	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300026530\|Ga0209807_1285751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300026538\|Ga0209056_10037302	All Organisms → cellular organisms → Bacteria → Acidobacteria	4505	Open in IMG/M
3300026999\|Ga0207949_1011075	Not Available	817	Open in IMG/M
3300027587\|Ga0209220_1000910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8677	Open in IMG/M
3300027645\|Ga0209117_1149845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300027667\|Ga0209009_1137681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300027674\|Ga0209118_1003955	All Organisms → cellular organisms → Bacteria → Acidobacteria	5913	Open in IMG/M
3300027846\|Ga0209180_10000032	All Organisms → cellular organisms → Bacteria	79441	Open in IMG/M
3300027846\|Ga0209180_10010835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4706	Open in IMG/M
3300027862\|Ga0209701_10004071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9586	Open in IMG/M
3300027862\|Ga0209701_10086594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1970	Open in IMG/M
3300027862\|Ga0209701_10159704	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300027862\|Ga0209701_10508372	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300027875\|Ga0209283_10003904	All Organisms → cellular organisms → Bacteria	8477	Open in IMG/M
3300027882\|Ga0209590_10044043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2448	Open in IMG/M
3300027882\|Ga0209590_10122903	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300027882\|Ga0209590_10268729	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300028792\|Ga0307504_10361367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031820\|Ga0307473_11002755	Not Available	610	Open in IMG/M
3300031962\|Ga0307479_10005947	All Organisms → cellular organisms → Bacteria	11169	Open in IMG/M
3300031962\|Ga0307479_10025459	All Organisms → cellular organisms → Bacteria → Acidobacteria	5610	Open in IMG/M
3300031962\|Ga0307479_10225698	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300032205\|Ga0307472_100559898	Not Available	1000	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.44%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.44%
Freshwater	Environmental → Aquatic → Freshwater	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.81%
Loam	Environmental → Terrestrial → Soil → Loam	14.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	45.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015892303	3300000364	Soil	MLSTDPLERKLQLSGIVLILGLVVESLCLLGHGPIAFILFVGLGGILFAVGISLYLYSLPSAGGAPSKQ*
JGI12636J13339_10089661	3300001154	Forest Soil	MLSTAPLERKLQLSGIILILGLVVEALCLLGHGPIAFMVFVGLGGVFFAAGILLYLYSLVSA
JGI12627J18819_103677141	3300001867	Forest Soil	MLSTSPLERKLQLSGIVLILGLLVEGLCLLGHGPIAFMLFAGLGGVLFAVGLLLYLYSLVDDRVEP
JGI25616J43925_100440364	3300002917	Grasslands Soil	MLSKTPFDRKLQLSGILLILGLVVEAVCLLRHGPIAFIIFAGLGGVLFAVGILLYLYSLVSAKVEPSKQ*
Ga0062384_1004400171	3300004082	Bog Forest Soil	MLGTSRLERKLQLSGMLLMLGLVVEAVCLLARGPIAFMVFVGLGGLLFAAGILLYLYSLVSTGVESSGK*
Ga0062387_1004219501	3300004091	Bog Forest Soil	MLGTSRLERKLQLSGMLLMLGLVVEAVCLLARGPIAFMVFVGLGGLLFAAGILLYLYSLVSTGVESS
Ga0058904_13904032	3300004100	Forest Soil	MLRMSPLERKLQLSGITLILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGILLYLYSLVGVKVEPSKQ*
Ga0058899_100130862	3300004631	Forest Soil	MLSSTPFDRKLQLSGIILVLGLVVEAVCLLGHGPIAFIVFAGLGGLLFAVGILLYLYSLVGGKVEPSQR*
Ga0066674_101140832	3300005166	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLNSLVSAKVETSKQ*
Ga0066673_100164792	3300005175	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETLKQ*
Ga0066690_110111632	3300005177	Soil	LSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ*
Ga0066388_1004217881	3300005332	Tropical Forest Soil	MPSANPLDRKLQVSAIILILGLVVEALCLVRGHGPIGFMVFVGLGGVLFAAGILLYLYSLVTAREPRDGVQ*
Ga0066388_1006171202	3300005332	Tropical Forest Soil	MLSTVPLERKLQLSGITLILGLVVEALCLLFGHGPIAFLFFVGLGGFLFAIGILLYLYSLLSTKPESSKQ*
Ga0066686_100338672	3300005446	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ*
Ga0066681_102160802	3300005451	Soil	KLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETLKQ
Ga0070706_1004586651	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKSPLDRKLQLSGILLILGLVVEAVCLLRHGPIAFIVFAGLGGLLLAGGIILYLYSLVATGERL
Ga0070707_1000360212	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKSPLDRKLQLSGILLILGLVVEAVCLLRHGPIAFIVFAGLGGLLLAGGIILYLYSLVATGERLS*
Ga0066651_100069703	3300006031	Soil	RKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETFKQ*
Ga0066656_105069571	3300006034	Soil	PLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ*
Ga0066659_100602534	3300006797	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLNSLVSAKVETSKQYVGV*
Ga0066660_109586882	3300006800	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETL
Ga0079220_104273762	3300006806	Agricultural Soil	MLSINPLERKLQLSGIMLILGLVVEGQCLLGRGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVRPSKQ*
Ga0099829_100023451	3300009038	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFIYLYSLVGAKAEPSKQ*
Ga0099829_100273254	3300009038	Vadose Zone Soil	MLSTSPLERKLQLSGILLILGLVVEALCLLGHGPIAFIVFMNLGGLLFTAGTLVYLYSLVSPNVKTPKQ*
Ga0099830_100178681	3300009088	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVERSKQ*
Ga0099830_102217912	3300009088	Vadose Zone Soil	MLSVSSLERKLQLSGIVVILGLLVEGLCLLGHGPIAFMLFVGLGGGLFAVGILLYLYSLVGAKVEPSKQ*
Ga0099830_106256191	3300009088	Vadose Zone Soil	RREVLEGRQLMLSTSPLERKPQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVSAKVETSKQ*
Ga0099830_112990232	3300009088	Vadose Zone Soil	MLSTSPLEQKLQLSGILLILGLVVEALCLLGHGPIAFIVFMSLGGLLFTAGTLVYLYSLVSANVKTPEQ*
Ga0099830_114239172	3300009088	Vadose Zone Soil	MLSTSPLERKLQLSGILLILGLVVEALCLLGHGPIAFIVFMSLGGLLFTAGTLVYLYSLVSPNVKTPKQ*
Ga0099828_100269811	3300009089	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAK
Ga0099828_101172462	3300009089	Vadose Zone Soil	MLSTSPFDRKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVSAKVETSKQ*
Ga0099828_101428201	3300009089	Vadose Zone Soil	MLSKTPFDRKLQLSGILLILGLVVEAVCLLRHGPIAFIIFAGLGSVLFAVGILLYLYSLVSAKVEPSKQ*
Ga0099828_109895251	3300009089	Vadose Zone Soil	MLSVSSLERKLQLSGIVVILGLLVEGLCLLGHGPIAFMLFVGLGGGLFAVGILLYLYSLV
Ga0099827_100806466	3300009090	Vadose Zone Soil	MASASPLEWRLQISGIILILGLLVEGLCLLGRGPIAFILFVGLGGFLFVVGILLYLYSLVSAKGEPSKE*
Ga0099827_105217162	3300009090	Vadose Zone Soil	MLSTSPLERKLQLSGTILILGLAVEALCLLGHGPIAFMVFMGLGGLLFTAGTLVYLYSLVSANVKYPKQ*
Ga0099792_102054112	3300009143	Vadose Zone Soil	MLSTSPLERKPQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVEPSKQ*
Ga0126374_106229862	3300009792	Tropical Forest Soil	MPSANPLDRKLQVSGIILILGLVVEALCLVRGHGPIGFMVFVGLGGVLFAAGILLYLYSLLSTKPESSKQ*
Ga0126380_109705421	3300010043	Tropical Forest Soil	LDRKLQVSAIILILGLVVEALCLVRGHGPIVFMVFVGLGGVLFAAGILLYLYSLVTARLPSKP*
Ga0126373_104674512	3300010048	Tropical Forest Soil	MLSTDPFDRRLQLSGIILILGLIVEALCLALGHGPIGFMLFVGLGGFLFAIGILLYLYSLVSTKGKSSGHGEDIRTNV*
Ga0134062_100635892	3300010337	Grasslands Soil	MDSTNLLERRLQISGIFVILGLLVEGLCLLGRGPIAFILFVGLGGFLFAAGILLYLYSLLGAQGEPSKQ*
Ga0134062_101068141	3300010337	Grasslands Soil	KLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLNSLVSAKVETSKQ
Ga0126372_111491022	3300010360	Tropical Forest Soil	MPSANPLDRKLQVSAIILILGLVVEALCLVRGHGPIGFMVFVGLGGVLFAAGILLYLYSLVTARLPSKP*
Ga0126378_101314113	3300010361	Tropical Forest Soil	MLSTVPLERKLQLSGITLILGLVVEALCLLFGHGPIAFLFFVSLGGFLFAIGILLYLYSLLSTKPESSKQ*
Ga0126378_119280352	3300010361	Tropical Forest Soil	MLSSIPLERRLQISGIILILGLLAEAVSLFGRGPFAFILFLVLGGVLFAVGILLYLYSLVRGTK*
Ga0150983_134065842	3300011120	Forest Soil	MMLSSTPFDRKLQLSGIILVLGLVVEAVCLLGHGPIAFIVFAGLGGLLFAVGILLYLYSLVGGKVEPSQR*
Ga0150983_142075072	3300011120	Forest Soil	MLRMSPLERKLQLSGITLILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGILLYLYSLVGPKVEPSKQ*
Ga0150983_155477992	3300011120	Forest Soil	MLSASPLERKLQLSGIILILGLVDESLCILGHGPIAFMLFVGLGGVLFAVGILLFLGSLVGPKVAPKQ*
Ga0137391_100371361	3300011270	Vadose Zone Soil	MLSPNLFDRKLQLSGIILILGLVVEALCLLGHGPIAFMLFLGLGGVLFAVGILLYLYSLVGAKVEPSKQ*
Ga0137393_103164623	3300011271	Vadose Zone Soil	MLSTSPLERKLQLSGILLILGLVVEALCLLGHGPIAFIVFMSLGGLLFTAGTLVYLYSLVSANVKTPEQ*
Ga0137393_104264871	3300011271	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKAEPSKQ*
Ga0137388_104436311	3300012189	Vadose Zone Soil	MLSTSPFDRKLQLSGIILILGLLVESLCLLGHGPIAFIVFAGLGGVLFAVGILLYLFSLVGAKAEPSTE*
Ga0137388_119170332	3300012189	Vadose Zone Soil	SGTILILGLVVEALCLLGRGPIAFLVFMGLGGLLFTAGTLIYLYSLVSANVKAPKQ*
Ga0137364_100080897	3300012198	Vadose Zone Soil	MLSTSPLERQLQLSGIILILGLLAEGLCLLGHGPIAFMLFVGVGGILFAVGIFLYLYSLLSAGVAHSKE*
Ga0137383_101037791	3300012199	Vadose Zone Soil	MLSTSPFDRKLQLSGIILILGLVVEALCLLGHGPTAFMLFLGLGGVLFAVGIVLYLYSLIGAQGEPSKQ*
Ga0137383_103166251	3300012199	Vadose Zone Soil	MLSTSPFDRKLQLCGIILILGLLVESLCLLGHGPIAFIVFAGLGGVLFAVGILLYLFSLVGAKAEPSKE*
Ga0137383_103758272	3300012199	Vadose Zone Soil	MLSPNLFDRKLQLSGIILILGLVVEALCLLGHGPIAFMLFLGLGGVLFAVGILLYLYSLVGTKVEPAKQ*
Ga0137365_100263231	3300012201	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLAVESLCLLGHGPIAFMLFLGLGGVLFAVGIVLYLYSLIGAQGEPSKQ*
Ga0137365_112514741	3300012201	Vadose Zone Soil	REVLEGRRLMLSKIPFDRKLQLSGIVLILGLVLEAVCLLRRGPIAFIVFAGLGGALFAVGILLYLYSLVSAKGEPSKE*
Ga0137363_113701831	3300012202	Vadose Zone Soil	MLSTSPLDRRLQISGIIMILGLVVEALCLMLGHGPIAFMVVASLGGALFAVGILLYLYSLVSAKSESPEQ*
Ga0137362_100718663	3300012205	Vadose Zone Soil	MLSTSPLDRKLQISGIILVLGLVVEALCLLLGHGPIAFMVVANLGGALFAVGILLYLYSLVSAKSESPEQ*
Ga0137380_100211912	3300012206	Vadose Zone Soil	MLSTSPLERKLQLSGTILILGLAVEALCLLGHGPIAFIVFVSLGGLLFTAGTLIYLYSLVSANVKSPKQ*
Ga0137380_100455842	3300012206	Vadose Zone Soil	MLSKIPFDRKLQLSGIVLILGLVLEAVCLLRHGPIAFIVFAGLGGALFAVGILLYLYSLVGAKVEPSKQ*
Ga0137380_103502902	3300012206	Vadose Zone Soil	MLSTSPFDRKLQLSGIILILGLAVESLCLLGHGPIAFMLFLGLGGVLFAVGIVLYLYSLIGAQGEPSKQ*
Ga0137380_103881662	3300012206	Vadose Zone Soil	MLSTSPFDRKLQLCGIILILGLLVESLCLLGHGPIAFIVFAGLGGVLFAVGILLYLFSLVGAKTEPSKE*
Ga0137380_104972592	3300012206	Vadose Zone Soil	MLSPNLFDRKLQLSGIILILGLVVEALCLLGHGPIAFMLFLGLGGVLFAVGIHLYLYSLVGAKVEPAKQ*
Ga0137380_114017912	3300012206	Vadose Zone Soil	MLSTSPLERKLQLSGILLILGLVVEALCLLGHGPLAFMVFMGLGGLLFTAGTLVYLYSLVSANVKSPKQ*
Ga0137381_100609704	3300012207	Vadose Zone Soil	MASASPLEWRLQISGIILILGLLVEGLCLLGRGPIAFILFVGLGGFLFVVGILLYLYSLVSVKGEPSKE*
Ga0137381_103959942	3300012207	Vadose Zone Soil	SGIILILGLAVESLCLLGHGPIAFMLFLGLGGVLFAVGIVLYLYSLIGAQGEPSKQ*
Ga0137381_114879801	3300012207	Vadose Zone Soil	NVLEGRSVMFSANPLERRLQISGIILILGLVVEALCLLGHGPIAFIVYVGLGGVLFAVGILLYLYSLASAKVEPSKQ*
Ga0137378_103112062	3300012210	Vadose Zone Soil	MLSPNLFDRKLQLSGIILILGLVVESLCLLGHSPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVEPSKQ*
Ga0137377_102637813	3300012211	Vadose Zone Soil	MLSTSPRERQLQLSGIILILGLLAEGLCLLGHGPIAFMLFVGVGGILFAVGIFLYLYSLLSAGVAHSKE*
Ga0137377_111930432	3300012211	Vadose Zone Soil	MLSKIPFDRKLQLSGIVLILGLVLEAVCLLRHGPIAFIVFAGLGGALFAVGILLYLYSLVSAKGEPSKE*
Ga0137384_116047761	3300012357	Vadose Zone Soil	QLSGIILILGLAVESLCLLGHGPIAFMLFLGLGGVLFAVGIVLYLYSLIGAQGEPSKQ*
Ga0137397_103174812	3300012685	Vadose Zone Soil	MLSTNPFDRKLQLSGIILILSLVVEALCLLLGHGPIAFMVFAGLDGALFVVGILLYLYSLVSAKAEPPSNRRSSMSASRKNEC*
Ga0137397_105791881	3300012685	Vadose Zone Soil	LMLSTDPLERKLQLSGIILILGLVVEAMCLLGHGPIAFMLFVGLGGVLFAVGILLYLYSLVSPKVEPSKQ*
Ga0137397_107165881	3300012685	Vadose Zone Soil	LMLSTDPLERKLQLSGIILILGLVVEAMCLLGHGPIAFMLFVGLGGVLFAIGILLYLHSLVSANVGTSKQ*
Ga0137395_107289661	3300012917	Vadose Zone Soil	KCWRGDISGIILILGLVVDALFLLLGHGPIAFMVVVSLSGALFAVGILLYLYSLVSAKSESPEQ*
Ga0137404_100528082	3300012929	Vadose Zone Soil	MLSTDPLERKLQLSGIILILGLVVEAMCLLGHGPIAFMLFVGLGGVLFAIGILLYLHSLVSANVGTSKQ*
Ga0134078_100164652	3300014157	Grasslands Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPITSVLFVGLGGVLFAAGILVYLYSLVGANAETLKQ*
Ga0137405_13994693	3300015053	Vadose Zone Soil	MLSTDPLERKLQLSGIILILGLVVEAMCLLGHGPIAFMLFVGLGGVLFAVGILLYLYSLVSPKVEPSKQ*
Ga0137418_107104181	3300015241	Vadose Zone Soil	GREVLEGDISGIILILGPVVEALCLLLGHGPIAFMVVAGLGGALFAVGILLYLYSLVSAKSESPEQ*
Ga0187782_106796021	3300017975	Tropical Peatland	NQLMAGQDQLERRLRLSGITLILGLLVESLCLLGRGPVAFMLFAGLGGVLIAAGILVYLYSLVAASPS
Ga0066655_100565292	3300018431	Grasslands Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLNSLVSAKVETSKQ
Ga0066669_101588062	3300018482	Grasslands Soil	MLSTSPLERKVQLSGIILILGLVVESLCLLGHGPIAFMLFAGLGGVLFAVGIFLYLNSLVSDKVETSKQ
Ga0193755_10036691	3300020004	Soil	MLSTDLLERKLQLSGIILILGLVVESLCLLGHGPIAFILFVGLGGILFAVGIFLYLYSLVSAKVEPSKQ
Ga0179594_100339602	3300020170	Vadose Zone Soil	MLSTDPLERKLQLSGIILILGLVVEAMCLLGHGPIAFMLFVGLGGVLFAIGILLYLHSLVSANVGTSKQ
Ga0210407_100257424	3300020579	Soil	MLRMSPLERKLQLSGITLILGLVVESLCLLDHGPIAFMLFVGLGGVLFAVGILLYLYSLVGPKVEPSKQ
Ga0210407_105877452	3300020579	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKAEPSKQ
Ga0210403_103937822	3300020580	Soil	MLSTSPLERKLQLSGIVLILALLVEGLCLLLGHGPIAFMVFAGLSGALFAVGILLYLYSLVSAKAEPSKQ
Ga0210399_1000031534	3300020581	Soil	MLSSTPFDRKLQLSGIILVLGLVVEAVCLLGHGPIAFIVFAGLGGLLFAVGILLYLYSLVGGKVEPSQR
Ga0215015_103474351	3300021046	Soil	MLSTSPFDRKLQLSGIILILGLLVEGLCLLGHGPVAFIVFAGLGGLLFAAGILLYLYSLVGGKVERSKQ
Ga0215015_103485482	3300021046	Soil	MLEHDWKSQLMLSASPLEWKLELSGIILILGLVVESLCLLGHGPIAFMLFVGLSGVLFAVGIFLYLYSLVGPNVEPSKQ
Ga0215015_107174922	3300021046	Soil	MLSTSPFDRKLQLSGILLILGLLVEGLCLLGHGPIAFIVFAGLGGLFFAGGIILYLYSLVATDQRQP
Ga0210408_100645943	3300021178	Soil	MLSTNPLERKLQLSGIILILGLVVEALCLLGRGPIAFIVFAGLGGLLLFAGFVIYLYSLVSVSHPHG
Ga0207684_105908171	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLSKSPLDRKLQLSGILLILGLVVEAVCLLRHGPIAFIVFAGLGGLLLAGGIILYLYSLVATGERLS
Ga0209468_10130582	3300026306	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ
Ga0209155_10343792	3300026316	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETLKQ
Ga0209472_12364672	3300026323	Soil	FEKREVLEGRQLMLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETLKQ
Ga0209375_10755622	3300026329	Soil	PLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ
Ga0209159_11585302	3300026343	Soil	RKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVK
Ga0257171_10087223	3300026377	Soil	MLSPSPLDRKLQLSGIVLILGLVVEALCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVSAKA
Ga0257153_10177763	3300026490	Soil	MLSTSPLDRRLQISGIIMILGLVVEALCLILGHGPIAFMVVASLGGALFAVGILLYLYSLVSAKSESPEQ
Ga0257153_10195702	3300026490	Soil	MLSTNPFDRKLQLSGVILILGLVVEALCLLLGHGPIAFMVFAGLGGALFAVGILLYLYSLVSAKAEPPEQ
Ga0257164_10630562	3300026497	Soil	MLSTSPLDRKLQLSGIVLILGLVVEALCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVSAKA
Ga0257165_10333661	3300026507	Soil	MLSTSPLDRRLQISGIIMILGLVVEALCLMLGHGPIAFMVVASLGGALFAVGILLYLYSLVSAKSESPEQ
Ga0209807_12857511	3300026530	Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAKTFKQ
Ga0209056_100373023	3300026538	Soil	GKQLMLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAAGILVYLYSLVGANAETVKQ
Ga0207949_10110752	3300026999	Forest Soil	MLRMSPLERKLQLSGITLILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGILLYLYSLVGVKV
Ga0209220_10009103	3300027587	Forest Soil	MLSTAPLERKLQLSGIILILGLVVEALCLLGHGPIAFMVFVGLGGVFFAAGILLYLYSLVSANVAPSGQ
Ga0209117_11498451	3300027645	Forest Soil	MLSTSPFDRKLQLSGILLILGLLVEALCLLGHGPIAFIVFAGVGGLLLAGGIILYLYSLVATGQRQP
Ga0209009_11376812	3300027667	Forest Soil	MLSTSPLDRKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLSGVFFAAGILLYLYSLLSAGGAPSKQ
Ga0209118_10039552	3300027674	Forest Soil	MLSRSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMVFVGLGGVFFAAGILLYLYSLLSAGVAPSKQ
Ga0209180_1000003222	3300027846	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFIYLYSLVGAKAEPSKQ
Ga0209180_100108355	3300027846	Vadose Zone Soil	MLSKTPFDRKLQLSGILLILGLVVEAVCLLRHGPIAFIIFAGLGGVLFAVGILLYLYSLVSAKVEPSKQ
Ga0209701_1000407110	3300027862	Vadose Zone Soil	MLSTSPLERKLQLSGILLILGLVVEALCLLGHGPIAFIVFMSLGGLLFTAGTLVYLYSLVSPNVKTPKQ
Ga0209701_100865944	3300027862	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVERSKQ
Ga0209701_101597042	3300027862	Vadose Zone Soil	MLSVSSLERKLQLSGIVVILGLLVEGLCLLGHGPIAFMLFVGLGGGLFAVGILLYLYSLVGAKVEPSKQ
Ga0209701_105083721	3300027862	Vadose Zone Soil	SPFDRKLQLSGIILILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVSAKVETSKQ
Ga0209283_100039042	3300027875	Vadose Zone Soil	MLSTSPLEQKLQLSGILLILGLVVEALCLLGHGPIAFIVFMSLGGLLFTAGTFVYLYSLVSANVKTPEQ
Ga0209590_100440434	3300027882	Vadose Zone Soil	MASASPLEWRLQISGIILILGLLVEGLCLLGRGPIAFILFVGLGGFLFVVGILLYLYSLVSAKGEPSKE
Ga0209590_101229031	3300027882	Vadose Zone Soil	MLSTSPLERKLQLSGIILILGLVVQSLCLLGHGPIAFMLFVGLGGVLFAVGIFIYLYSLVGAKAEPSKQ
Ga0209590_102687292	3300027882	Vadose Zone Soil	MLSTSPLERKLQLSGTILILGLAVEALCLLGHGPIAFMVFMGLGGLLFTAGTLFYLYSLVSANVKSPKQ
Ga0307504_103613671	3300028792	Soil	MLSTSPLDRKLQLSGIVLILGLVVEAVCLLGHGPIAFIIFTGLGGILFAVGIFLYLYSLVSAKA
Ga0307473_110027551	3300031820	Hardwood Forest Soil	MLSTDPVERKLQLSGIILILGLVVESLCLLGQGPIAFILFVGLGGILFAVGISLYLYSLPSAGGAPSKQ
Ga0307479_1000594712	3300031962	Hardwood Forest Soil	MLSTSPLERKLQLSGIILILGLLVEGLCLLGHGPIAFMLFAGLGGVLFAVGLLLYLYSLVGAKVEPSKQ
Ga0307479_100254593	3300031962	Hardwood Forest Soil	MLSTSPFDRKLQLSGILLILGLLVEALCLLGHGPIAFIVFAGLGGFLFVVGILLYLYSLVSARVEPSKQ
Ga0307479_102256984	3300031962	Hardwood Forest Soil	MLSINPLERKLQLSGIMLILGLVVESLCLLGHGPIAFMLFVGLGGVLFAVGIFLYLYSLVGAKVEPSKQ
Ga0307472_1005598981	3300032205	Hardwood Forest Soil	MLSTDPLERKLQLSGIILILGLVVESLCLLGQGPIAFILFVGLGGILFAVGISLYLYSLPSAGGAPSKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences