Metagenome / Metatranscriptome Family F064528

Overview

Basic Information

• Family ID: F064528
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 128
• Average Sequence Length: 45 residues
• Representative Sequence: MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGE
• Number of Associated Samples: 95
• Number of Associated Scaffolds: 128

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 82.03 %
• % of genes near scaffold ends (potentially truncated): 98.44 %
• % of genes from short scaffolds (< 2000 bps): 95.31 %
• Associated GOLD sequencing projects: 89
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (94.531 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.062 % of family members)
• Environment Ontology (ENVO): Unclassified (62.500 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (59.375 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 15.28%
  β-sheet: 0.00%
  Coil/Unstructured: 84.72%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04392	ABC_sub_bind	3.91
PF04430	DUF498	1.56
PF00550	PP-binding	0.78
PF07883	Cupin_2	0.78
PF08279	HTH_11	0.78
PF07690	MFS_1	0.78
PF01266	DAO	0.78
PF08042	PqqA	0.78
PF06904	Extensin-like_C	0.78
PF10686	YAcAr	0.78
PF01527	HTH_Tnp_1	0.78
PF12833	HTH_18	0.78
PF01220	DHquinase_II	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.91
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	1.56
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	1.56
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.78
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.78

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.53 %
Unclassified	root	N/A	5.47 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.53 %
Unclassified	root	N/A	5.47 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.53 %
Unclassified	root	N/A	5.47 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.84 %
Unclassified	root	N/A	5.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	85.94 %
Unclassified	root	N/A	5.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 6

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	75.78 %
Unclassified	root	N/A	5.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.12 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.78 %
Unclassified	root	N/A	5.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.34 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.78 %
Unclassified	root	N/A	5.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.34 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.78 %
Unclassified	root	N/A	5.47 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.78 %
Unclassified	root	N/A	5.47 %
Bradyrhizobium sp. NAS96.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2189573000|GPBTN7E02JX5A1	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515
3300000597|AF_2010_repII_A1DRAFT_10032603	All Organisms → cellular organisms → Bacteria	1402
3300000787|JGI11643J11755_11178815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645
3300004268|Ga0066398_10151531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582
3300005163|Ga0066823_10049444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755
3300005181|Ga0066678_11134444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502
3300005332|Ga0066388_102518889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935
3300005332|Ga0066388_102603756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921
3300005558|Ga0066698_10378529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976
3300005713|Ga0066905_101407840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631
3300005764|Ga0066903_102545508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991
3300005764|Ga0066903_107299094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571
3300005764|Ga0066903_108806076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512
3300006032|Ga0066696_10533844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768
3300006800|Ga0066660_10858336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740
3300009137|Ga0066709_100488724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1731
3300009137|Ga0066709_100685382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1472
3300010043|Ga0126380_12277589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502
3300010048|Ga0126373_10768763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024
3300010303|Ga0134082_10182701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855
3300010360|Ga0126372_10940435	All Organisms → cellular organisms → Bacteria → Proteobacteria	871
3300010361|Ga0126378_10059097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3617
3300010366|Ga0126379_11455005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791
3300010366|Ga0126379_12607833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603
3300010376|Ga0126381_104651723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529
3300010398|Ga0126383_10521225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250
3300010403|Ga0134123_11149515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803
3300012201|Ga0137365_10518980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875
3300012948|Ga0126375_11534122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571
3300012948|Ga0126375_11639507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555
3300012951|Ga0164300_11025700	All Organisms → cellular organisms → Bacteria → Proteobacteria	533
3300012971|Ga0126369_10820807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013
3300012971|Ga0126369_12201969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638
3300012971|Ga0126369_12886793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563
3300015372|Ga0132256_102981703	Not Available	569
3300016270|Ga0182036_10273219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1275
3300016270|Ga0182036_10847483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747
3300016270|Ga0182036_11568147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554
3300016294|Ga0182041_10362814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221
3300016294|Ga0182041_11019339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749
3300016294|Ga0182041_11527869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615
3300016319|Ga0182033_10692144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892
3300016319|Ga0182033_10984806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750
3300016319|Ga0182033_12061821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520
3300016341|Ga0182035_11131460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697
3300016357|Ga0182032_10467378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032
3300016357|Ga0182032_12002673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508
3300016371|Ga0182034_11298442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635
3300016404|Ga0182037_10623812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917
3300016404|Ga0182037_11786453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549
3300016422|Ga0182039_10735179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872
3300016445|Ga0182038_10276115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363
3300021178|Ga0210408_10080726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2549
3300021403|Ga0210397_10949066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667
3300021560|Ga0126371_10499375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1365
3300025898|Ga0207692_10359493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899
3300025916|Ga0207663_10427706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017
3300025916|Ga0207663_10711894	All Organisms → cellular organisms → Bacteria → Proteobacteria	795
3300026296|Ga0209235_1147681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941
3300026540|Ga0209376_1096027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1531
3300026547|Ga0209156_10074847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1728
3300026872|Ga0207785_1021566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563
3300027087|Ga0208605_101574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629
3300027174|Ga0207948_1013824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936
3300029636|Ga0222749_10463767	All Organisms → cellular organisms → Bacteria → Proteobacteria	680
3300031545|Ga0318541_10676560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576
3300031561|Ga0318528_10554925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617
3300031573|Ga0310915_10180206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1471
3300031573|Ga0310915_11095173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553
3300031573|Ga0310915_11144667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539
3300031668|Ga0318542_10084812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1507
3300031681|Ga0318572_10293303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960
3300031681|Ga0318572_10356390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868
3300031682|Ga0318560_10123754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355
3300031682|Ga0318560_10204870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054
3300031723|Ga0318493_10830504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521
3300031747|Ga0318502_10613398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655
3300031769|Ga0318526_10297397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660
3300031770|Ga0318521_10985919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516
3300031782|Ga0318552_10629912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547
3300031792|Ga0318529_10210911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901
3300031795|Ga0318557_10377924	Not Available	651
3300031798|Ga0318523_10599642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542
3300031799|Ga0318565_10316977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757
3300031805|Ga0318497_10408827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759
3300031831|Ga0318564_10266329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759
3300031833|Ga0310917_10101954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1848
3300031835|Ga0318517_10116385	All Organisms → cellular organisms → Bacteria	1181
3300031846|Ga0318512_10448609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651
3300031859|Ga0318527_10193921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859
3300031860|Ga0318495_10289568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730
3300031879|Ga0306919_10335072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153
3300031879|Ga0306919_10399499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054
3300031890|Ga0306925_10891703	All Organisms → cellular organisms → Bacteria → Acidobacteria	915
3300031890|Ga0306925_11866244	Not Available	573
3300031894|Ga0318522_10157192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	857
3300031896|Ga0318551_10413936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767
3300031912|Ga0306921_10860270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1032
3300031941|Ga0310912_10094057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2196
3300031942|Ga0310916_11534438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542
3300031945|Ga0310913_10260884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1218
3300031945|Ga0310913_10877383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631
3300031946|Ga0310910_10592649	Not Available	879
3300031954|Ga0306926_11507970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775
3300031954|Ga0306926_11830569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688
3300031954|Ga0306926_12164143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	620
3300031959|Ga0318530_10047364	All Organisms → cellular organisms → Bacteria	1606
3300031981|Ga0318531_10048412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1798
3300032001|Ga0306922_10055251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4117
3300032035|Ga0310911_10872912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519
3300032041|Ga0318549_10101171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256
3300032041|Ga0318549_10452068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578
3300032042|Ga0318545_10125147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908
3300032060|Ga0318505_10451725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607
3300032066|Ga0318514_10402672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726
3300032076|Ga0306924_10117468	Not Available	3023
3300032076|Ga0306924_10638458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1201
3300032076|Ga0306924_11467643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	725
3300032076|Ga0306924_11871188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623
3300032076|Ga0306924_11904037	Not Available	616
3300032076|Ga0306924_12590901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506
3300032089|Ga0318525_10245739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920
3300032091|Ga0318577_10233724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880
3300032094|Ga0318540_10053623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1816
3300032094|Ga0318540_10102780	All Organisms → cellular organisms → Bacteria	1345
3300032261|Ga0306920_100201205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2972
3300033289|Ga0310914_10538722	Not Available	1055
3300033290|Ga0318519_10185182	All Organisms → cellular organisms → Bacteria	1181

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.22%
Plants	Host-Associated → Plants	0.78%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.06%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300015372	Soil combined assembly	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental
3300027087	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF017 (SPAdes)	Environmental
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_07971730	2189573000	Grass Soil	MEIYEVELCHRGRWEQQEARFVAARDADEAAYKVTGKQLRSEGE
AF_2010_repII_A1DRAFT_100326033	3300000597	Forest Soil	MNIYEVELCRRGRWEQQDTRFVAARDADEAAYKVTGEHLHSEGERRKVRLRVR
JGI11643J11755_111788152	3300000787	Soil	MDIYEVELCRRGRWEQQXARFXAAXDXDEAAYKVAGGHLHSEGDP
Ga0066398_101515311	3300004268	Tropical Forest Soil	MDIYEVELCHRGRWEQQDARFVAATDADEAAYKVIGEHLHSEGERKKVRLRVRRL
Ga0066823_100494441	3300005163	Soil	MDIYEVELCHRGRWEQQEARFVAARDADEAAYKVTGRQLRSEGERRKVRLRVRR
Ga0066678_111344441	3300005181	Soil	MGIMDIYEVELCRRARWEQHDARFVAAGDADEAAYKVTGEHLHSEGEHRKV
Ga0066388_1025188891	3300005332	Tropical Forest Soil	MGIMDIYEVELCRRGRWEQQDARFVAAGDADEAAYKVTGEHLHSEGERRKVRLRVR
Ga0066388_1026037561	3300005332	Tropical Forest Soil	MDIYEVELCRRGRWEQQNARFVAAGDADEAAYKVTGEHLHSEGERRR
Ga0066698_103785291	3300005558	Soil	MGIMDIYEVELCRRGRWEQHDARFVAAGDADEAAY*
Ga0066905_1014078401	3300005713	Tropical Forest Soil	MDIYEVELCRRGRWEQQDVRFVAARDADEAAYKVTGEHLHSEGER
Ga0066903_1025455081	3300005764	Tropical Forest Soil	MGILDIYEVDLCRRGRWQDQDARFVAAGDAAEAAYKV
Ga0066903_1072990941	3300005764	Tropical Forest Soil	MVMDIYEIELCRRGRWEQQDARFVAARDADEAAYRVTGEHLHSEGER
Ga0066903_1088060762	3300005764	Tropical Forest Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYRVTGEHL
Ga0066696_105338442	3300006032	Soil	MGIMDIYEVELCRRGRWEQHYARFVAAGDGAITRVC
Ga0066660_108583361	3300006800	Soil	MDIYEVELCRRGRWEQQDARFVAAGDAGEAAYKVARAHLHSEGDRRRIRLRVRRL
Ga0066709_1004887243	3300009137	Grasslands Soil	MDIYEVELCRRGRWEQQDGRFVAAGDADEAAYKVTGEHLR
Ga0066709_1006853822	3300009137	Grasslands Soil	MGIMDIYEVELCRRGRWEQQDGRFVAAGDADEAAY
Ga0126380_122775891	3300010043	Tropical Forest Soil	AKACRGQIYEVELCHRGRRERQDARFVAAGDADEAAYKVVG*
Ga0126373_107687632	3300010048	Tropical Forest Soil	MGIMDIYEVELCRRGRWEQQDARFVAAVNADEAAYKVTGEHLQSEGERRKVR
Ga0134082_101827011	3300010303	Grasslands Soil	MGIMDIYEVELCRRGRWEQHDARFVAAGDADEAAYKVTGEHLHSEGEHRKVRLRVRR
Ga0126372_109404351	3300010360	Tropical Forest Soil	MGIMDIYEVELWCRGRWDQQVARFVAAGDADEAAYKVTGEHLHSEGERRK
Ga0126378_100590971	3300010361	Tropical Forest Soil	MDIYEVELCRGGRWEQQDARFVAATDADEAAYKVTREHLHSEGE
Ga0126379_114550051	3300010366	Tropical Forest Soil	MDIYEVELCRRGRWEQQEVRFVAARDADEAAYKVTGEHLHSEGERGKVRLRVRR
Ga0126379_126078331	3300010366	Tropical Forest Soil	MGSMDIYEVELCRRGRWEEQDARFVAARDADEAACKVTR
Ga0126381_1046517232	3300010376	Tropical Forest Soil	MEIYEVELCQYGRWEQQHARFVAAKDADEAAYKVTGEHLRSEGDRRSVRLRVRRL
Ga0126383_105212253	3300010398	Tropical Forest Soil	MVMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLH
Ga0134123_111495151	3300010403	Terrestrial Soil	MDIYEVELCRRGRWEQQDARFIAAGDADEAAYKVTGEHLHSEGGRRKV
Ga0137365_105189803	3300012201	Vadose Zone Soil	MGIMDIYEVELCRRGRWEQQDARFVAAGDADEAAYKVTGEHLHSDGERR
Ga0126375_115341221	3300012948	Tropical Forest Soil	MGAIDIYEVELCSRGRCEDARFVAAGDADEAAYKVVG*
Ga0126375_116395071	3300012948	Tropical Forest Soil	MGITDIYEVELCRRGRWEQHDARFVAAGDADEAAYRVTGEHLHSEGEG
Ga0164300_110257001	3300012951	Soil	MEIYEVELCHRGRWEQQEARFVAARDADEAAYKVTGEQLRSEGERRKVRLRVRRL
Ga0126369_108208071	3300012971	Tropical Forest Soil	MDIYEVELCRRGRSEQQDARFVAARDADEAAYKVTGEHLHSEGERRKVRLRVRR
Ga0126369_122019692	3300012971	Tropical Forest Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGEHLHSEGER
Ga0126369_128867932	3300012971	Tropical Forest Soil	MDIYEVELCRRGRWEQQEVRFVAARDADEAAYKVTGEHLHSEGERGKVRL
Ga0132256_1029817031	3300015372	Arabidopsis Rhizosphere	MEMYEVQVVPHGRWERQQTRIVAARNEDEAAYKVT
Ga0182036_102732191	3300016270	Soil	MGIMDIYEVELCRRGRWEKQDARFVAARDADEAAYKVTGEHLHSEGE
Ga0182036_108474831	3300016270	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHS
Ga0182036_115681471	3300016270	Soil	MDIYEVELCRRGRWEQQDARFVAAVNADEAAYKVTGEHLQSEGERRKVR
Ga0182041_103628142	3300016294	Soil	MEIYEVALCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKLRLRVK
Ga0182041_110193391	3300016294	Soil	MNIYEVELCRRGRWEQQDVRFVAARDADEAAYKVTGEHLHSEGERRKVRLRV
Ga0182041_115278691	3300016294	Soil	MDIYEVELCRRGHWEQQDARFVAAGDADEAAYKVTGE
Ga0182033_106921441	3300016319	Soil	MNIYEVELCRRGRWEQQDARFVAARDADEAAYKVT
Ga0182033_109848061	3300016319	Soil	MDIYEVELCRRGRWEQQDARFIAAGDADEAAYKVTGEHLHSEGERRKVRLRVRR
Ga0182033_120618211	3300016319	Soil	MDIYEVELCQRGRWEQQHARFSAARDADEAAYKVTGEHLRSEGERKKLRLRV
Ga0182035_111314603	3300016341	Soil	MEIYEVELCQHGRWEQQYARFVAARDADEAAYKVTGEHLRSEGERRKLRLRVK
Ga0182032_104673783	3300016357	Soil	MDIYEVEFCRRGRWEQQDARFVAARDADEAAYKVAGEH
Ga0182032_120026732	3300016357	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTG
Ga0182034_112984422	3300016371	Soil	MEIYEIELCKRGRWEQQHARVVAAQDADEAAYKVTGEHLRSEGE
Ga0182037_106238123	3300016404	Soil	MDIYEVELCRRGRWEPQDARFVAASDAAEAAYKVTGEHLHSEG
Ga0182037_117864531	3300016404	Soil	MEIYEVELCQHGRWERQHARFVAARDADEAAYKVTGEHLRSEGERRKLRLRVKRL
Ga0182039_107351791	3300016422	Soil	MDIYEVELYRRGRWEHQEAHVVAARDADEAAYRVTGKHLRSEGERRKM
Ga0182038_102761153	3300016445	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGE
Ga0210408_100807261	3300021178	Soil	MEIYEVELCHRGRWEQQDARFVAARNADEAAYKVTGIQLRSEGE
Ga0210397_109490662	3300021403	Soil	MDIYEVELCHRGRWGQQDARFVAARDANEAAYNVTGE
Ga0126371_104993751	3300021560	Tropical Forest Soil	MGIMDIYKVELCRRGHWEQQDARFVAAGDADEAAYK
Ga0207692_103594931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDIYEVELCRRGRWEQQDARFIAAGDADEAAYKVTGEHLHSEGGRRKVRL
Ga0207663_104277061	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDIYEVELCRRGEHQPARFVAAGDADEAAYKVTGEHLRSEGERRKIRLRVR
Ga0207663_107118941	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEIYEVELCHRGRWEQQEARFVAARDADEAAYKVTGEQLRSEGERR
Ga0209235_11476811	3300026296	Grasslands Soil	MDIYEVELCRRGRWEQQDGRFVAAGDADEAAYKVTGEHLRS
Ga0209376_10960271	3300026540	Soil	MGIMDIYEVELCRRGRWEQQDGRFVAAGDADEAAYKVTGEHLRSEGE
Ga0209156_100748472	3300026547	Soil	MVMDIYEVELCRRGRWEQQDGRFVAAGDADEAAYKVTGEHLRS
Ga0207785_10215662	3300026872	Tropical Forest Soil	MDIYEVEFYRRGRWEHQEAHVIAARDADEAAYRVTGKHLRSEGERR
Ga0208605_1015741	3300027087	Forest Soil	MDIYEVELCHRGRWEQQDARFVAARNADEAAYKVTGIQLRSEGE
Ga0207948_10138241	3300027174	Forest Soil	MEIYEVELCHRGRWEQQEARFVAARDADEAAHKVTGRQLR
Ga0222749_104637671	3300029636	Soil	MEIYEVKLCHRGRWEQQEARFVAARDADEAAYKVTGEQLRSEGERR
Ga0318541_106765602	3300031545	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEVAYKVTGEHL
Ga0318528_105549251	3300031561	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRSYG
Ga0310915_101802062	3300031573	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGE
Ga0310915_110951732	3300031573	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGE
Ga0310915_111446671	3300031573	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTG
Ga0318542_100848121	3300031668	Soil	MEIYEVALCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKL
Ga0318572_102933033	3300031681	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGERLHSEGERGKVR
Ga0318572_103563902	3300031681	Soil	MEIYEVALCQHGRWEQQHARFVAARDADEAAYKVTGKYLRSEGERGKVR
Ga0318560_101237541	3300031682	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKV
Ga0318560_102048703	3300031682	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGEHLHSEGERGKVRLRV
Ga0318493_108305041	3300031723	Soil	MEIYEVALCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKLR
Ga0318502_106133982	3300031747	Soil	MSTLDIYEVEPCRCGRCDEQDARFVAAGDADEAACKVTGE
Ga0318526_102973971	3300031769	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGEHLH
Ga0318521_109859192	3300031770	Soil	MGIMDIYEVELCRRGRWEKQDARFVAARDADEAAYKVTGE
Ga0318552_106299121	3300031782	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGKHLHSEGERSKVRLR
Ga0318529_102109111	3300031792	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEVAYKVTREHLHS
Ga0318557_103779241	3300031795	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGE
Ga0318523_105996421	3300031798	Soil	MGIMDIYEVELCRRGRWEKQDARFVAARDADEAAYKVTGEHLH
Ga0318565_103169771	3300031799	Soil	MSTLDIYEVEPCRRGRCDEQDARFVAAGDADEAACKVTGEHLH
Ga0318497_104088271	3300031805	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGERLHSEGEQRKVR
Ga0318564_102663291	3300031831	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGEHLHSEGERGKVRL
Ga0310917_101019546	3300031833	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEG
Ga0318517_101163851	3300031835	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGERRQVRLRI
Ga0318512_104486092	3300031846	Soil	MVMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHS
Ga0318527_101939213	3300031859	Soil	MSTLDIYEVEPCRCGRCDEQDARFVAAGDADEAACKVTGEHLHSEGERRK
Ga0318495_102895683	3300031860	Soil	MVMDIYEVELCRRGRWEQQDARFVAARDADEAAYKV
Ga0306919_103350721	3300031879	Soil	MEIYEVELCQHGRWEQQPARFVAARDADEAAYKVTGEHLRSEGERRKLRLRVKRL
Ga0306919_103994992	3300031879	Soil	MEIYEIELCKRGRWEQLHARFVAAQDADEAAYKVT
Ga0306925_108917033	3300031890	Soil	MVMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVT
Ga0306925_118662441	3300031890	Soil	MDIYEVEFYRRGRWDHQEARDVAAGDADEAAYRVIGKHLRSQGER
Ga0318522_101571922	3300031894	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHGEGERRQVRL
Ga0318551_104139361	3300031896	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGER
Ga0306921_108602703	3300031912	Soil	MSTLDIYEVEPCRRGRCEEQDARFVAAGDADEAAY
Ga0310912_100940574	3300031941	Soil	MDIYEVEFCRRGRWEQQDARFVAARDADEAAYKVAGE
Ga0310916_115344381	3300031942	Soil	MDIYEVELCRRGRWEQQDARFVAAIDADEAAYRVAGQHLH
Ga0310913_102608841	3300031945	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHL
Ga0310913_108773831	3300031945	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSDGER
Ga0310910_105926491	3300031946	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKVRLRVKR
Ga0306926_115079701	3300031954	Soil	MVMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGE
Ga0306926_118305691	3300031954	Soil	MEIYEVELCQRGRWEQQHARFVAARDADEAAYKVTGEHLRSEGNRRNVRLRVRRL
Ga0306926_121641432	3300031954	Soil	MDIYEVELCRRGHWEQQDARFVAAGDADEAAYKVTGEY
Ga0318530_100473644	3300031959	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGE
Ga0318531_100484125	3300031981	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHS
Ga0306922_100552511	3300032001	Soil	MDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLH
Ga0310911_108729121	3300032035	Soil	MDIYEVELCRCGRWEQRDARVVAARDAEEAAYNVTGKHLRNEGEPR
Ga0318549_101011714	3300032041	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGERRQARLR
Ga0318549_104520681	3300032041	Soil	MGIMDIYEVELCRRGRWELQDARFVAARDADEAAYKVTGEHLHSEGERGKVRLR
Ga0318545_101251472	3300032042	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERKKLRLR
Ga0318505_104517251	3300032060	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKLRLRV
Ga0318514_104026722	3300032066	Soil	MSTLDIYEVEPCRCGRCDEQDARFVAAGDADEAACKVTGEHLHSEGERRKVR
Ga0306924_101174685	3300032076	Soil	MEIYEVELCQRGRWEQQHARFVAASDADEAAYKVTGEHLRSEGDRR
Ga0306924_106384581	3300032076	Soil	MDIYEVERCRRGRWEQQDARFVAARDADEAAYRVTGGHLHSEGERRKV
Ga0306924_114676431	3300032076	Soil	MEIYEVELCQRGRWEQQYARFVAAKDADEAAYKVTGEHLRSEGNRRNVR
Ga0306924_118711881	3300032076	Soil	MDIYEVELCRRGRWEQQDARFVAAGDADEAAYKATG
Ga0306924_119040372	3300032076	Soil	MDIYEVELCRRGHWEQQDARFVAAGDADEAAYKVTGEYLHSDGERRKV
Ga0306924_125909012	3300032076	Soil	MSSLDIYEVELCRRGRCEQQDARFVAAGDADEAAYKVTG
Ga0318525_102457392	3300032089	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEGERRQVRLR
Ga0318577_102337242	3300032091	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEH
Ga0318540_100536236	3300032094	Soil	MGIMDIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLH
Ga0318540_101027802	3300032094	Soil	MEIYEVELCQHGRWEQQHARFVAARDADEAAYKVTGEHLRSEGERRKLRLRVKR
Ga0306920_1002012051	3300032261	Soil	MNIYEVELCRRGRWEQQDARFVAARDADEAAYKVTGEHLHSEG
Ga0310914_105387221	3300033289	Soil	MDMYEVQLYRQGRWEQQRWRVVAARDEDEAAYKVTGE
Ga0318519_101851821	3300033290	Soil	MDIYEVELCRRGRGEQQDARFVAAIDADEAASRRVT