Metagenome / Metatranscriptome Family F064523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	41 residues
Representative Sequence	MAERFGWTPEQVDNLPAGTADWLIAIARTVDEVKAERAAQ
Number of Associated Samples	89
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.41 %
% of genes near scaffold ends (potentially truncated)	27.34 %
% of genes from short scaffolds (< 2000 bps)	62.50 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.375 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (17.188 % of family members)
Environment Ontology (ENVO)	Unclassified (54.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04883	HK97-gp10_like	36.72
PF05709	Sipho_tail	2.34
PF02467	Whib	1.56
PF04233	Phage_Mu_F	1.56
PF00877	NLPC_P60	0.78
PF01844	HNH	0.78
PF06791	TMP_2	0.78
PF01464	SLT	0.78
PF00910	RNA_helicase	0.78
PF01583	APS_kinase	0.78
PF07691	PA14	0.78
PF01391	Collagen	0.78
PF01507	PAPS_reduct	0.78
PF13730	HTH_36	0.78
PF05257	CHAP	0.78
PF14594	Sipho_Gp37	0.78
PF00436	SSB	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	2.34
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.78
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.78
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.78
COG5281	Phage-related minor tail protein	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
All Organisms	root	All Organisms	40.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
cellular organisms	root	All Organisms → cellular organisms	27.34 %
Viruses	superkingdom	All Organisms → Viruses	13.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.69 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.69 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.94 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.69 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.12 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Gammaproteobacteria bacterium LSUCC0112	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	4.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.34 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.34 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Gammaproteobacteria bacterium LSUCC0112	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	4.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.34 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.34 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.56 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Gammaproteobacteria bacterium LSUCC0112	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	4.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.34 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.34 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.16 %
Gammaproteobacteria bacterium LSUCC0112	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	4.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.34 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.34 %
Candidatus Frankia meridionalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	1.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10144362	Not Available	595	Open in IMG/M
3300002206\|metazooDRAFT_1309139	Not Available	606	Open in IMG/M
3300002471\|metazooDRAFT_1483391	Not Available	867	Open in IMG/M
3300002476\|metazooDRAFT_10868124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	797	Open in IMG/M
3300002835\|B570J40625_100003725	All Organisms → cellular organisms → Bacteria	28560	Open in IMG/M
3300003429\|JGI25914J50564_10067869	Not Available	923	Open in IMG/M
3300004054\|Ga0063232_10267096	Not Available	518	Open in IMG/M
3300004448\|Ga0065861_1044914	Not Available	9258	Open in IMG/M
3300004461\|Ga0066223_1191020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1495	Open in IMG/M
3300005527\|Ga0068876_10004294	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10061	Open in IMG/M
3300005528\|Ga0068872_10078196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2009	Open in IMG/M
3300005528\|Ga0068872_10240948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	1018	Open in IMG/M
3300005581\|Ga0049081_10008246	Not Available	3946	Open in IMG/M
3300005581\|Ga0049081_10015134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	2918	Open in IMG/M
3300005582\|Ga0049080_10109965	Not Available	935	Open in IMG/M
3300006110\|Ga0007871_1009901	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1955	Open in IMG/M
3300006802\|Ga0070749_10023959	All Organisms → Viruses → Predicted Viral	3846	Open in IMG/M
3300006802\|Ga0070749_10078484	All Organisms → Viruses → Predicted Viral	1974	Open in IMG/M
3300007516\|Ga0105050_10141101	All Organisms → Viruses → Predicted Viral	1547	Open in IMG/M
3300007541\|Ga0099848_1018472	All Organisms → Viruses → Predicted Viral	2999	Open in IMG/M
3300007541\|Ga0099848_1028308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	2347	Open in IMG/M
3300007541\|Ga0099848_1031167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2223	Open in IMG/M
3300007640\|Ga0070751_1237253	Not Available	697	Open in IMG/M
3300008107\|Ga0114340_1000406	Not Available	41267	Open in IMG/M
3300008107\|Ga0114340_1027583	All Organisms → Viruses → Predicted Viral	3241	Open in IMG/M
3300008107\|Ga0114340_1095417	All Organisms → Viruses → Predicted Viral	1199	Open in IMG/M
3300008107\|Ga0114340_1116091	Not Available	1044	Open in IMG/M
3300008116\|Ga0114350_1001091	All Organisms → cellular organisms → Bacteria	16111	Open in IMG/M
3300008259\|Ga0114841_1229092	Not Available	635	Open in IMG/M
3300008259\|Ga0114841_1276885	Not Available	524	Open in IMG/M
3300008266\|Ga0114363_1095030	Not Available	1083	Open in IMG/M
3300008267\|Ga0114364_1000920	All Organisms → cellular organisms → Bacteria	30497	Open in IMG/M
3300008267\|Ga0114364_1017149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6690	Open in IMG/M
3300008267\|Ga0114364_1047738	Not Available	1556	Open in IMG/M
3300008450\|Ga0114880_1000138	Not Available	40429	Open in IMG/M
3300008450\|Ga0114880_1025728	All Organisms → Viruses → Predicted Viral	2683	Open in IMG/M
3300008450\|Ga0114880_1055380	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1658	Open in IMG/M
3300008450\|Ga0114880_1216069	Not Available	628	Open in IMG/M
3300009068\|Ga0114973_10019288	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4257	Open in IMG/M
3300009151\|Ga0114962_10337807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	830	Open in IMG/M
3300009155\|Ga0114968_10000243	Not Available	40048	Open in IMG/M
3300009158\|Ga0114977_10177834	Not Available	1256	Open in IMG/M
3300009159\|Ga0114978_10028968	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3975	Open in IMG/M
3300009165\|Ga0105102_10265036	Not Available	879	Open in IMG/M
3300009182\|Ga0114959_10031639	Not Available	3215	Open in IMG/M
3300009182\|Ga0114959_10033075	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300009183\|Ga0114974_10188519	All Organisms → Viruses → Predicted Viral	1266	Open in IMG/M
3300009184\|Ga0114976_10205817	Not Available	1082	Open in IMG/M
3300010354\|Ga0129333_10128733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	2329	Open in IMG/M
3300010354\|Ga0129333_10299339	Not Available	1439	Open in IMG/M
3300010354\|Ga0129333_10312641	All Organisms → Viruses → Predicted Viral	1404	Open in IMG/M
3300010354\|Ga0129333_11103276	Not Available	662	Open in IMG/M
3300010885\|Ga0133913_10002944	Not Available	42112	Open in IMG/M
3300010885\|Ga0133913_10019201	Not Available	18224	Open in IMG/M
3300010885\|Ga0133913_10158744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6047	Open in IMG/M
3300010885\|Ga0133913_10608192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2869	Open in IMG/M
3300010885\|Ga0133913_11689425	All Organisms → Viruses → Predicted Viral	1592	Open in IMG/M
3300010885\|Ga0133913_11836489	Not Available	1515	Open in IMG/M
3300010966\|Ga0137675_1000566	Not Available	2795	Open in IMG/M
3300010970\|Ga0137575_10071694	Not Available	549	Open in IMG/M
3300012013\|Ga0153805_1020627	Not Available	1122	Open in IMG/M
3300012013\|Ga0153805_1082456	Not Available	545	Open in IMG/M
3300013004\|Ga0164293_10044883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3594	Open in IMG/M
3300013004\|Ga0164293_10178739	Not Available	1552	Open in IMG/M
3300013093\|Ga0164296_1108581	Not Available	1154	Open in IMG/M
3300014811\|Ga0119960_1009369	Not Available	951	Open in IMG/M
3300014962\|Ga0134315_1028150	Not Available	871	Open in IMG/M
3300017716\|Ga0181350_1127543	Not Available	607	Open in IMG/M
3300017761\|Ga0181356_1125400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	815	Open in IMG/M
3300017761\|Ga0181356_1138291	Not Available	763	Open in IMG/M
3300019784\|Ga0181359_1000100	All Organisms → cellular organisms → Bacteria	16638	Open in IMG/M
3300020162\|Ga0211735_11449076	Not Available	861	Open in IMG/M
3300020172\|Ga0211729_11444303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	5355	Open in IMG/M
3300020506\|Ga0208091_1001873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3244	Open in IMG/M
3300021519\|Ga0194048_10179049	Not Available	790	Open in IMG/M
3300022190\|Ga0181354_1015278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2356	Open in IMG/M
3300022198\|Ga0196905_1023975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1885	Open in IMG/M
3300022407\|Ga0181351_1000304	Not Available	13529	Open in IMG/M
3300022752\|Ga0214917_10002308	All Organisms → cellular organisms → Bacteria	23462	Open in IMG/M
3300022752\|Ga0214917_10003728	All Organisms → cellular organisms → Bacteria	17426	Open in IMG/M
3300023174\|Ga0214921_10001567	Not Available	38666	Open in IMG/M
3300023184\|Ga0214919_10071840	All Organisms → cellular organisms → Bacteria	3118	Open in IMG/M
3300025783\|Ga0208258_1018188	Not Available	1074	Open in IMG/M
3300025889\|Ga0208644_1096553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1466	Open in IMG/M
3300027656\|Ga0209357_1104644	Not Available	797	Open in IMG/M
3300027659\|Ga0208975_1196272	Not Available	541	Open in IMG/M
3300027708\|Ga0209188_1000446	Not Available	40025	Open in IMG/M
3300027708\|Ga0209188_1022062	Not Available	3229	Open in IMG/M
3300027734\|Ga0209087_1025058	Not Available	2899	Open in IMG/M
3300027759\|Ga0209296_1000345	All Organisms → cellular organisms → Bacteria	39601	Open in IMG/M
3300027782\|Ga0209500_10116588	Not Available	1300	Open in IMG/M
3300027793\|Ga0209972_10175709	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300027896\|Ga0209777_11068465	Not Available	547	Open in IMG/M
3300027963\|Ga0209400_1000351	Not Available	40053	Open in IMG/M
3300028025\|Ga0247723_1000190	Not Available	39572	Open in IMG/M
3300028025\|Ga0247723_1138728	Not Available	579	Open in IMG/M
3300028108\|Ga0256305_1174689	Not Available	510	Open in IMG/M
3300031758\|Ga0315907_10048833	All Organisms → Viruses → Predicted Viral	3730	Open in IMG/M
3300031758\|Ga0315907_10672948	Not Available	791	Open in IMG/M
3300031787\|Ga0315900_10614963	Not Available	791	Open in IMG/M
3300031857\|Ga0315909_10005229	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14995	Open in IMG/M
3300031857\|Ga0315909_10521437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	815	Open in IMG/M
3300031857\|Ga0315909_10670965	Not Available	678	Open in IMG/M
3300031857\|Ga0315909_10718009	Not Available	646	Open in IMG/M
3300031857\|Ga0315909_10843809	Not Available	573	Open in IMG/M
3300031951\|Ga0315904_10411699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1222	Open in IMG/M
3300031951\|Ga0315904_10440643	Not Available	1168	Open in IMG/M
3300031951\|Ga0315904_10680736	Not Available	869	Open in IMG/M
3300031963\|Ga0315901_10894128	Not Available	633	Open in IMG/M
3300032050\|Ga0315906_10494861	Not Available	1036	Open in IMG/M
3300032050\|Ga0315906_11283516	Not Available	524	Open in IMG/M
3300032116\|Ga0315903_10582683	Not Available	863	Open in IMG/M
3300032562\|Ga0316226_1256205	Not Available	695	Open in IMG/M
3300033978\|Ga0334977_0546451	Not Available	523	Open in IMG/M
3300033995\|Ga0335003_0209281	Not Available	928	Open in IMG/M
3300033996\|Ga0334979_0261716	Not Available	996	Open in IMG/M
3300034020\|Ga0335002_0605228	Not Available	567	Open in IMG/M
3300034061\|Ga0334987_0303049	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300034062\|Ga0334995_0479956	Not Available	754	Open in IMG/M
3300034062\|Ga0334995_0773815	Not Available	529	Open in IMG/M
3300034064\|Ga0335001_0046735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium LSUCC0112	2516	Open in IMG/M
3300034064\|Ga0335001_0458272	Not Available	680	Open in IMG/M
3300034066\|Ga0335019_0113156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1812	Open in IMG/M
3300034101\|Ga0335027_0006313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10388	Open in IMG/M
3300034104\|Ga0335031_0792395	Not Available	532	Open in IMG/M
3300034106\|Ga0335036_0514396	Not Available	743	Open in IMG/M
3300034283\|Ga0335007_0645170	Not Available	603	Open in IMG/M
3300034356\|Ga0335048_0408699	Not Available	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.44%
Terrestrial	Environmental → Terrestrial	1.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.50%
Marine	Environmental → Aquatic → Marine	10.94%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.56%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	47.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.09%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	12.50%
Coastal	Environmental → Aquatic → Marine → Coastal	10.94%
Ice	Environmental → Aquatic → Freshwater → Ice	2.34%
Pond	Environmental → Aquatic → Freshwater → Pond	1.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
River	Environmental → Aquatic → Freshwater → River	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.66%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.84%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.78%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.19%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	16.41%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	11.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.16%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	8.59%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.25%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.12%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.12%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.12%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	2.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.56%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	1.56%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	1.56%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.56%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.78%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.78%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.78%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.78%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.78%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.78%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002206	Freshwater microbial communities from San Paulo Zoo lake, Brazil - OCT 2012	Environmental	Open in IMG/M
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300002476	Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006110	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300010966	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1bis, april 2016	Environmental	Open in IMG/M
3300010970	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028108	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101443622	3300000756	Freshwater And Sediment	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTEGL*N
metazooDRAFT_13091392	3300002206	Lake	MAERFGWTPDQVDNLPANTADWLIAIGNVVEMARAERLGDK*
metazooDRAFT_14833912	3300002471	Lake	MAERFGWTPEQVDNLPALTADWLLAIARTVEEVKSERLE*
metazooDRAFT_108681243	3300002476	Lake	VYYTMAERFGWTPEQVDNLPANTADWLIAIDNTIQQVKAERAVDK*
B570J40625_10000372510	3300002835	Freshwater	MAERFGWTPEQVDNLPAETADWLLAIARITEEVKAEGAQ*
JGI25914J50564_100678691	3300003429	Freshwater Lake	MADRFGWTPEQVDNLPANAADWLMAIARTVDEVKVERMKD*
Ga0063232_102670962	3300004054	Freshwater Lake	MADRFGWTPEQVDNLPAGTGDWLIAIAGAVEEIKAERAERN*
Ga0065861_10449147	3300004448	Marine	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKAEGLRD*
Ga0066223_11910202	3300004461	Marine	MADRFGWTPEEVDNLPAGTADWILSIAATVGEVKFERAERANK*
Ga0068876_100042947	3300005527	Freshwater Lake	MADKFGWTPEQVDNLPAGTVDWLLAIATVVEQVKAERLKD*
Ga0068872_100781963	3300005528	Freshwater Lake	LAERFGWTPEQVDELPAYTADWLLAIGATIDQVKAEKMEKS*
Ga0068872_102409483	3300005528	Freshwater Lake	ADKFGWTPEQVDNLPGPTADWLLSITALAEEVKAERLDNQL*
Ga0049081_100082467	3300005581	Freshwater Lentic	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTEGLRDG*
Ga0049081_100151342	3300005581	Freshwater Lentic	MAERFGWTPEQVDNLPAYTADWLLAISATIDQVKADNIERS*
Ga0049080_101099652	3300005582	Freshwater Lentic	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTEGL*
Ga0007871_10099013	3300006110	Freshwater	ADRFGWTPEQVDNLPAARADWLLSIADIIEEVKLEQIESRK*
Ga0070749_100239596	3300006802	Aqueous	MAERFGWTPEQVDELPAYTADWLLAIGATIDQVKAEKMENS*
Ga0070749_100784843	3300006802	Aqueous	MYYTMAERFGWTPDQVDNLPANTADWLVAIAGIVEQVKAERAANSDGTP*
Ga0105050_101411011	3300007516	Freshwater	YQMADRFGWTPEQVDNLPAKQAEWLLAIAATVEQIKVDRLGN*
Ga0099848_10184723	3300007541	Aqueous	VYYIAADRFGWTPEQVDDLPANTADWLWAIAAAVDEVKAERAGGS*
Ga0099848_10283083	3300007541	Aqueous	FYYQMADRFGWTPQEVDELPAITADWLLAIAGTIEKIKAERIDRA*
Ga0099848_10311675	3300007541	Aqueous	MAERFGWTPEQVDNLPANLADWLLAIGATIDQVKAEKMENS*
Ga0070751_12372532	3300007640	Aqueous	MADRFGWTPEQVDNLPANTADWLIAIAAAVEEVKAEKAERASK*
Ga0114340_100040663	3300008107	Freshwater, Plankton	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTERLQDG*
Ga0114340_10275831	3300008107	Freshwater, Plankton	YFQFADRFGWTPDQVDELPAGTADWLISIAATVESAKAERASE*
Ga0114340_10954173	3300008107	Freshwater, Plankton	VYYIAADRFGWTPDQVDDLPANTADWLWAIAAVVDEVKAERMERS*
Ga0114340_11160912	3300008107	Freshwater, Plankton	MADRFGWTPDQVDNLPAETADWLLAIAATVEQVRADRSG*
Ga0114350_100109115	3300008116	Freshwater, Plankton	MAERFGWTPEQVDNLPANTADWLIAIGNVVEIARAERMSDQ*
Ga0114841_12290921	3300008259	Freshwater, Plankton	VYYIAADRFGWTPDQVDDLPANTADWLWAIATVVDEVKAE
Ga0114841_12768851	3300008259	Freshwater, Plankton	IAADRFGWTPDQVDDLPANTADWLWAIATVVDEVKAERMERS*
Ga0114363_10950302	3300008266	Freshwater, Plankton	MADKFGWTPEQVDNLPAGTVDWLLAIATVVEQVKAERANG*
Ga0114364_10009207	3300008267	Freshwater, Plankton	MAERFGWTPQQVDDLPAQTADWLIAIARTVDEVKTEGLRE*
Ga0114364_10171492	3300008267	Freshwater, Plankton	MADRFGYTPDEVDNMPAHTADWLIAIGRMVDSVKADRIKGDK*
Ga0114364_10477382	3300008267	Freshwater, Plankton	MYYFNMADRFGWTPEQVDNLPAGTADWLLAIANTVESVKADRSRGE*
Ga0114880_100013820	3300008450	Freshwater Lake	MADRFGWTPEQVDNLPANTADWLLAIARTVDEVKTERLDNG*
Ga0114880_10257283	3300008450	Freshwater Lake	YYIAADRFGWTPDQVDDLPANTADWLWAIAAVVDEVKAERMERS*
Ga0114880_10553803	3300008450	Freshwater Lake	REWYYFQMADRFGYTPEEVDNMPAHTADWLVAIGRMVDSVKADRIKGDK*
Ga0114880_12160691	3300008450	Freshwater Lake	VYYIAADRFGWTPDQVDDLPANTADWLWAIAAVVDE
Ga0114973_100192883	3300009068	Freshwater Lake	MAERFGWTPEQVDNLPAGTADWLIAIARTVDEVKAEGLRE*
Ga0114962_103378072	3300009151	Freshwater Lake	MADRFGWTPEQVDNLPAATADWLLALAGAVQEVKNEKAEKAGG*
Ga0114968_1000024321	3300009155	Freshwater Lake	MADRFGWTPEEVDNLPAGTADWLIAIAGAVEEVKAERAEKASG*
Ga0114977_101778342	3300009158	Freshwater Lake	MADRFGWTPDQVDEIPAGTADWLLAIASTVDEVKVEKAEQARN*
Ga0114978_100289683	3300009159	Freshwater Lake	MADRFGWTPDQVDNLNPITADWLLAIATTVQQVETERMNEQ*
Ga0105102_102650362	3300009165	Freshwater Sediment	MADRFGWTPQQVDDLPAKTADWLIAIARTVDEVKTEGLRE*
Ga0114959_100316392	3300009182	Freshwater Lake	MAERFGWTPEQVDNLPAETADWLIAIGNMVEEIKNERAE*
Ga0114959_100330751	3300009182	Freshwater Lake	QFADRFGWTPDQVDELPAGTADWLISIAATVESAKAERASE*
Ga0114974_101885191	3300009183	Freshwater Lake	YWYYYQMAERFGWTPQQVDELPAITSDWLLAISSMIDRVKAERIERA*
Ga0114976_102058171	3300009184	Freshwater Lake	FGWTPEQVDELPAGQADWLIAIAATVENVKADRLNKQ*
Ga0129333_101287333	3300010354	Freshwater To Marine Saline Gradient	MADRFGWTPDQVDNLSPNLADWLIAIGNTVEQVKAERLNEQ*
Ga0129333_102993393	3300010354	Freshwater To Marine Saline Gradient	MAERFGWTPEQVDNLPASTADWLLAIGKVVDEVKAERLEK*
Ga0129333_103126412	3300010354	Freshwater To Marine Saline Gradient	MAERFGWTPEQVNELPAYTADWLLAIGATIDQVKAEKMEKS*
Ga0129333_111032762	3300010354	Freshwater To Marine Saline Gradient	MAERFGWTPDQVDNLPANTADWLIAIGNVVEIARAERMSDQ
Ga0133913_1000294473	3300010885	Freshwater Lake	MAERFGWTPEQVNNLPAETADWLIAIGNMVEEIKNERAE*
Ga0133913_100192013	3300010885	Freshwater Lake	MAERFGWTPEQVDNLPAGTADWLIAIARTVDEVKAEN*
Ga0133913_101587441	3300010885	Freshwater Lake	ILAERFGWTPTQVDEQPAVTLDWLIAIGNLVDEVKNQRNQ*
Ga0133913_106081921	3300010885	Freshwater Lake	MADRFGWTPQQVDELPAITSDWLLAISSMIDRVKAERIERA*
Ga0133913_116894253	3300010885	Freshwater Lake	MADRFGWTPEQVDNMPAGTADWMLAIAATVEAVKTKRLDN*
Ga0133913_118364893	3300010885	Freshwater Lake	MADRFGWTPEQVDNLPAGTADWLIAIANTVEEVKIERAERESK*
Ga0137675_10005666	3300010966	Pond Fresh Water	MAERFGWTPEQVDNLPASTADWLLAIARTVDEVKTEGL*
Ga0137575_100716942	3300010970	Pond Fresh Water	LFAERFGWTPSQVDNESAVTLDWMLAIGNIVDEVKAEQMK*
Ga0153805_10206272	3300012013	Surface Ice	MADRFGWTPQEVDELPAITSDWLLSISSMIDRVKAERIERA*
Ga0153805_10824562	3300012013	Surface Ice	MADRFGWTPQQVDELPAGTADWLIAIAGAVEEVKAEKAERASG*
Ga0164293_100448835	3300013004	Freshwater	MADRFGWTPEQVDNLPANTADWIMAIAITVDQVKAERQSE*
Ga0164293_101787393	3300013004	Freshwater	MAERFGWTPEQVDNLPAGTADWLLAIARITEEVKAEGAQ*
Ga0164296_11085811	3300013093	Freshwater	FGWTPEQVDNLPATKADWLLAIANAVEEVKIEKMEKR*
Ga0119960_10093692	3300014811	Aquatic	MADRFGWTPDQVDNIPAAQADWLMAIAKTVDEVKAEGLEQR*
Ga0134315_10281501	3300014962	Surface Water	ADRFGWTPEQVDNLPAATADWLISIAQITDEVKAERTENGI*
Ga0181350_11275432	3300017716	Freshwater Lake	MADRFGWTPEQVDNLPAGTGDWLIAIAGAVEEVKAERAERN
Ga0181356_11254002	3300017761	Freshwater Lake	MADRFGWTPEQVDDLPAGTADWLIAIAGAVEEVKAEKTERASG
Ga0181356_11382913	3300017761	Freshwater Lake	FGWTPEQVDNLPVETADWLIAIATTVESVKADRIKDL
Ga0181359_10001006	3300019784	Freshwater Lake	MADRFGWTPEQVDNLPANAADWLMAIARTVDEVKVERMKD
Ga0211735_114490761	3300020162	Freshwater	WTPEQVDNLPARTADWLIAIARTVDEVKTERLQDG
Ga0211729_114443037	3300020172	Freshwater	MAERFGWTPEQVDNLPARTADWLIAIARTVDEVKTERLQDG
Ga0208091_10018733	3300020506	Freshwater	MAERFGWTPEQVDNLPAETADWLLAIARITEEVKAEGAQ
Ga0194048_101790492	3300021519	Anoxic Zone Freshwater	MAERFGWTPEQVDNLPAGTADWLIAIARTVDEVKAEN
Ga0181354_10152783	3300022190	Freshwater Lake	MADRFGWTPEQVDELPAGTADWLIAIAGAVEEVKAEKAERASG
Ga0196905_10239753	3300022198	Aqueous	VYYIAADRFGWTPEQVDDLPANTADWLWAIAAAVDEVKAERAGGS
Ga0181351_10003047	3300022407	Freshwater Lake	MADRFGWTPEQVDNLPAGTGDWLIAIAGAVEEIKAERAERN
Ga0214917_1000230829	3300022752	Freshwater	MADRFGWTPQQVDELPAITSDWLLAISSMIDKVKAERIERA
Ga0214917_100037289	3300022752	Freshwater	MAERFGWTPEQVDNLPADTADWLIAIARTVDEVKAEGLRE
Ga0214921_100015676	3300023174	Freshwater	MADRFGYTPKEVDDLPAQTADWLLAIAATVEEVKIEMAERTK
Ga0214919_100718403	3300023184	Freshwater	MADRFGWTPEQVDELPAGQADWLIAIAATVENVKADRLNKQ
Ga0208258_10181881	3300025783	Freshwater	FADRFGWTPEQVDNLPAARADWLLSIADIIEEVKLEQIESRK
Ga0208644_10965533	3300025889	Aqueous	MAERFGWTPEQVDELPAYTADWLLAIGATIDQVKAEKMENS
Ga0209357_11046441	3300027656	Freshwater Lake	MADRFGWTPEQVDNLPVETADWLIAIATTVESVKADRIKDL
Ga0208975_11962722	3300027659	Freshwater Lentic	MAERFGWTPEQVDNLPAYTADWLLAISATIDQVKADNIERS
Ga0209188_100044660	3300027708	Freshwater Lake	MADRFGWTPEQVDNLPAATADWLLALAGAVQEVKNEKAEKAGG
Ga0209188_10220622	3300027708	Freshwater Lake	MAERFGWTPEQVDNLPAETADWLIAIGNMVEEIKNERAE
Ga0209087_10250582	3300027734	Freshwater Lake	MADRFGWTPDQVDEIPAGTADWLLAIASTVDEVKVEKAEQARN
Ga0209296_100034542	3300027759	Freshwater Lake	MAERFGWTPEQVDNLPAGTADWLIAIARTVDEVKAERAAQ
Ga0209500_101165882	3300027782	Freshwater Lake	MADRFGWTPDQVDNLNPITADWLLAIATTVQQVETERMNEQ
Ga0209972_101757092	3300027793	Freshwater Lake	VYYIAADRFGWTPDQVDDLPANTADWLWAIATVVDEVKAERMERS
Ga0209777_110684651	3300027896	Freshwater Lake Sediment	ADRFGWTPEQVDNLPATKADWLLAIANAVEEVKIEKMEKR
Ga0209400_10003519	3300027963	Freshwater Lake	MADRFGWTPEEVDNLPAGTADWLIAIAGAVEEVKAERAEKASG
Ga0247723_100019063	3300028025	Deep Subsurface Sediment	MAERFGWTPQQVDDLPAQTADWLIAIARTVDEVKTEGLRE
Ga0247723_11387282	3300028025	Deep Subsurface Sediment	MADRFGWTPDQVDNLPAETADWLLAIAATVEQVRADRSG
Ga0256305_11746891	3300028108	Freshwater	MAERFGWTPDQVDNLPANTADWLMAIAVTVEEVKAERIDP
Ga0315907_100488333	3300031758	Freshwater	MAERFGWTPEQVDNLPANTADWLIAIGNVVEIARAERMSDQ
Ga0315907_106729483	3300031758	Freshwater	VYYIAADRFGWTPDQVDDLPANTADWLWAIATVVDEVK
Ga0315900_106149631	3300031787	Freshwater	LAERFGWTPEQVDELPAYTADWLLAIGATIDQVKA
Ga0315909_100052293	3300031857	Freshwater	MADRFGWTPEQVDNLPANTADWLLAIARTVDEVKTERLDNG
Ga0315909_105214371	3300031857	Freshwater	YYYAMAERFGWTPEQVDNLPAYTADWMLAIGATIDQVKAEKMEQ
Ga0315909_106709652	3300031857	Freshwater	MADRFGWTPDQVDNLPAETADWLLAIAATVEQVKADRSG
Ga0315909_107180092	3300031857	Freshwater	MADRFGWTPDIVDNLPARTADWLLAIAGTLERVKADRLSE
Ga0315909_108438091	3300031857	Freshwater	MADRFGYTPEEVDNMPAHTADWLIAIGRMVDSVKADRIKGDK
Ga0315904_104116992	3300031951	Freshwater	MAERFGWTPEQVDNLPAYTADWMLAISATIDQIKAKQMEQS
Ga0315904_104406432	3300031951	Freshwater	MADKFGWTPEQVDNLPAGTVDWLLAIATVVEQVKAERANG
Ga0315904_106807362	3300031951	Freshwater	MADRFGWTPDIVDNLPARTADWLLAIAGTLERVKADGLNP
Ga0315901_108941281	3300031963	Freshwater	DDHWLYYTMAERFGWTPDQVDNLPADTADWLIAIGNVVQSVRAERASDQ
Ga0315906_104948613	3300032050	Freshwater	WFYYQMAERFGWTPDQVDNLPANTADWLMAIAVTVEEVKAERIDPK
Ga0315906_112835161	3300032050	Freshwater	WNYYFMADKFGWTPEQVDNLPAGTVDWLLAIATVVEQVKAERANG
Ga0315903_105826831	3300032116	Freshwater	GWTPDQVDDLPANTADWLWAIATVVDEVKAERMERS
Ga0316226_12562051	3300032562	Freshwater	RFGWTPEQVDNLPAVKADWLLAIADAVEEVKIEKMEKR
Ga0334977_0546451_234_359	3300033978	Freshwater	MAERFGWTPEQVNELPAYTADWLLAIGATIDQVKAEKMEKS
Ga0335003_0209281_125_241	3300033995	Freshwater	MAERFGWTPDQVDNLPAVTADWLIAIARTVDEVKAEGL
Ga0334979_0261716_275_400	3300033996	Freshwater	MADRFGWTPEQVDNLNPLTADWLLSIAHTVQQVEAERMNEQ
Ga0335002_0605228_437_562	3300034020	Freshwater	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTEGLQNG
Ga0334987_0303049_828_950	3300034061	Freshwater	MADRFGWTPEQVDNLPANTADWIMAIAITVDQVKAERQSG
Ga0334995_0479956_139_264	3300034062	Freshwater	MAERFGWTPEQVDNLPANTADWLIAIARTVDEVKTEGLRDG
Ga0334995_0773815_109_231	3300034062	Freshwater	MAERFGWTPQQVDDLPAKTADWLIAIARTVDEVKTEGLRE
Ga0335001_0046735_648_773	3300034064	Freshwater	MAERFGWTPDQVDNLPAVTADWLIAIARTVDEVKAEGLKNG
Ga0335001_0458272_20_139	3300034064	Freshwater	MAERVGWTPEQVDNLPAETADWLLAIARITEEVKAEGAQ
Ga0335019_0113156_56_175	3300034066	Freshwater	MAERFGWTPEQVDNLPAHTADWLLAIAKTVEEVKSERLG
Ga0335027_0006313_497_622	3300034101	Freshwater	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKAEGLGNG
Ga0335031_0792395_427_531	3300034104	Freshwater	MAERFGWTPEQVDNLPAGTADWLMAIARTVDEVKA
Ga0335036_0514396_240_377	3300034106	Freshwater	MYYIAADRFGWTPDQVDDLPANTADWLWAIATVVDEVKAERMDRS
Ga0335007_0645170_143_262	3300034283	Freshwater	MAERFGWTPEQVDNLPAETADWLIAIARTIDEVKAEARE
Ga0335048_0408699_564_671	3300034356	Freshwater	MAERFGWTPEQVDNLPASTADWLIAIARTVDEVKTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences