Metagenome / Metatranscriptome Family F064459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064459
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	69 residues
Representative Sequence	MATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Number of Associated Samples	82
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.41 %
% of genes near scaffold ends (potentially truncated)	60.16 %
% of genes from short scaffolds (< 2000 bps)	95.31 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.688 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.094 % of family members)
Environment Ontology (ENVO)	Unclassified (41.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 94.12% β-sheet: 0.00% Coil/Unstructured: 5.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF08734	GYD	3.12
PF04392	ABC_sub_bind	2.34
PF02518	HATPase_c	2.34
PF03992	ABM	1.56
PF00589	Phage_integrase	1.56
PF13442	Cytochrome_CBB3	1.56
PF06803	DUF1232	1.56
PF01527	HTH_Tnp_1	0.78
PF00083	Sugar_tr	0.78
PF07690	MFS_1	0.78
PF13374	TPR_10	0.78
PF07687	M20_dimer	0.78
PF13560	HTH_31	0.78
PF05974	DUF892	0.78
PF11799	IMS_C	0.78
PF00027	cNMP_binding	0.78
PF08379	Bact_transglu_N	0.78
PF05721	PhyH	0.78
PF01641	SelR	0.78
PF13489	Methyltransf_23	0.78
PF03401	TctC	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.12
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.34
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.56
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.78
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.78
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.69 %
Unclassified	root	N/A	45.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.69 %
Unclassified	root	N/A	45.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.69 %
Unclassified	root	N/A	45.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.38 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.47 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.81 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.69 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.78 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.78 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.12 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.78 %
Pseudooceanicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola	0.78 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	0.78 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.78 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Bradyrhizobium sp. 184	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 184	0.78 %
Mesorhizobium amorphae CCBAU 01583	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	0.78 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.78 %
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	0.78 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02I17G2	Not Available	508	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1057834	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10087475	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10158809	Not Available	541	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10090180	Not Available	650	Open in IMG/M
3300002561\|JGI25384J37096_10211279	Not Available	568	Open in IMG/M
3300004633\|Ga0066395_10684491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300005147\|Ga0066821_1026823	Not Available	515	Open in IMG/M
3300005163\|Ga0066823_10111357	Not Available	572	Open in IMG/M
3300005167\|Ga0066672_10937021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	533	Open in IMG/M
3300005174\|Ga0066680_10535120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300005332\|Ga0066388_101363822	Not Available	1228	Open in IMG/M
3300005332\|Ga0066388_104988856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	674	Open in IMG/M
3300005363\|Ga0008090_10102924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	718	Open in IMG/M
3300005363\|Ga0008090_10204068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2345	Open in IMG/M
3300005363\|Ga0008090_15577176	Not Available	618	Open in IMG/M
3300005557\|Ga0066704_10543086	Not Available	758	Open in IMG/M
3300005713\|Ga0066905_100419284	Not Available	1091	Open in IMG/M
3300005713\|Ga0066905_101432067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300005764\|Ga0066903_100113712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3726	Open in IMG/M
3300005764\|Ga0066903_100409104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2238	Open in IMG/M
3300005764\|Ga0066903_100554403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	1972	Open in IMG/M
3300005764\|Ga0066903_100606987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1898	Open in IMG/M
3300005764\|Ga0066903_102359311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1028	Open in IMG/M
3300005764\|Ga0066903_102860988	Not Available	936	Open in IMG/M
3300005764\|Ga0066903_105643184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	658	Open in IMG/M
3300005764\|Ga0066903_106157861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	627	Open in IMG/M
3300005764\|Ga0066903_106922763	Not Available	588	Open in IMG/M
3300005764\|Ga0066903_107602597	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_108341167	Not Available	529	Open in IMG/M
3300006058\|Ga0075432_10176968	Not Available	833	Open in IMG/M
3300006854\|Ga0075425_102008834	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006935\|Ga0081246_1348710	Not Available	577	Open in IMG/M
3300006953\|Ga0074063_13470504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	596	Open in IMG/M
3300009012\|Ga0066710_103095398	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300009147\|Ga0114129_10564236	Not Available	1479	Open in IMG/M
3300009792\|Ga0126374_10381528	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300010043\|Ga0126380_11925651	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010046\|Ga0126384_11938047	Not Available	562	Open in IMG/M
3300010046\|Ga0126384_12254492	Not Available	525	Open in IMG/M
3300010047\|Ga0126382_10166533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1529	Open in IMG/M
3300010047\|Ga0126382_10173756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1504	Open in IMG/M
3300010048\|Ga0126373_10589844	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300010048\|Ga0126373_11549977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300010358\|Ga0126370_12114026	Not Available	553	Open in IMG/M
3300010359\|Ga0126376_11492495	Not Available	704	Open in IMG/M
3300010361\|Ga0126378_13235264	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010362\|Ga0126377_11376137	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010366\|Ga0126379_10363265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 184	1483	Open in IMG/M
3300010366\|Ga0126379_10690898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300010366\|Ga0126379_10734050	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300010366\|Ga0126379_11172551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300010376\|Ga0126381_103006527	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010376\|Ga0126381_103986454	Not Available	575	Open in IMG/M
3300010398\|Ga0126383_10329822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300010398\|Ga0126383_10950549	Not Available	947	Open in IMG/M
3300010398\|Ga0126383_12657382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300010398\|Ga0126383_12672514	Not Available	582	Open in IMG/M
3300010398\|Ga0126383_12816773	Not Available	568	Open in IMG/M
3300010398\|Ga0126383_12890769	Not Available	561	Open in IMG/M
3300010398\|Ga0126383_13643928	Not Available	503	Open in IMG/M
3300012200\|Ga0137382_10314613	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300012204\|Ga0137374_10890435	Not Available	655	Open in IMG/M
3300012355\|Ga0137369_11098220	Not Available	520	Open in IMG/M
3300012361\|Ga0137360_10709937	Not Available	864	Open in IMG/M
3300012923\|Ga0137359_11329109	Not Available	607	Open in IMG/M
3300014150\|Ga0134081_10156743	Not Available	751	Open in IMG/M
3300016270\|Ga0182036_10614459	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300016319\|Ga0182033_10236993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1475	Open in IMG/M
3300016319\|Ga0182033_11453030	Not Available	618	Open in IMG/M
3300016319\|Ga0182033_11477641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300016341\|Ga0182035_11183648	Not Available	682	Open in IMG/M
3300016357\|Ga0182032_11481149	Not Available	589	Open in IMG/M
3300016371\|Ga0182034_10136011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1824	Open in IMG/M
3300016387\|Ga0182040_10428162	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300017654\|Ga0134069_1099195	Not Available	948	Open in IMG/M
3300021560\|Ga0126371_11496996	Not Available	803	Open in IMG/M
3300025885\|Ga0207653_10025890	Not Available	1878	Open in IMG/M
3300025915\|Ga0207693_10227736	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300026326\|Ga0209801_1280536	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300027846\|Ga0209180_10094788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1696	Open in IMG/M
3300027874\|Ga0209465_10309070	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300027874\|Ga0209465_10437057	Not Available	655	Open in IMG/M
3300027882\|Ga0209590_10756406	Not Available	619	Open in IMG/M
3300028047\|Ga0209526_10080019	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300029636\|Ga0222749_10225811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	945	Open in IMG/M
3300031545\|Ga0318541_10126215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1392	Open in IMG/M
3300031546\|Ga0318538_10081319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1646	Open in IMG/M
3300031561\|Ga0318528_10111855	Not Available	1439	Open in IMG/M
3300031573\|Ga0310915_10100859	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300031573\|Ga0310915_10629871	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031668\|Ga0318542_10293896	Not Available	831	Open in IMG/M
3300031719\|Ga0306917_10139085	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300031719\|Ga0306917_10214393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300031719\|Ga0306917_10251139	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031719\|Ga0306917_11150150	Not Available	603	Open in IMG/M
3300031736\|Ga0318501_10213868	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031748\|Ga0318492_10275423	Not Available	873	Open in IMG/M
3300031793\|Ga0318548_10328377	Not Available	751	Open in IMG/M
3300031797\|Ga0318550_10256393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300031819\|Ga0318568_10560919	Not Available	712	Open in IMG/M
3300031846\|Ga0318512_10416693	Not Available	676	Open in IMG/M
3300031890\|Ga0306925_11303837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300031890\|Ga0306925_11330228	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300031890\|Ga0306925_12035429	Not Available	540	Open in IMG/M
3300031890\|Ga0306925_12191028	Not Available	514	Open in IMG/M
3300031910\|Ga0306923_10327151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1749	Open in IMG/M
3300031910\|Ga0306923_12103373	Not Available	569	Open in IMG/M
3300031912\|Ga0306921_10517379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1386	Open in IMG/M
3300031941\|Ga0310912_10061260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2679	Open in IMG/M
3300031941\|Ga0310912_10426288	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031941\|Ga0310912_11345437	Not Available	540	Open in IMG/M
3300031941\|Ga0310912_11390373	Not Available	530	Open in IMG/M
3300031942\|Ga0310916_10290436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1383	Open in IMG/M
3300031946\|Ga0310910_10413579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300031946\|Ga0310910_11571751	Not Available	503	Open in IMG/M
3300031947\|Ga0310909_11137581	Not Available	633	Open in IMG/M
3300031947\|Ga0310909_11194749	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300031954\|Ga0306926_12539484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300032025\|Ga0318507_10511431	Not Available	522	Open in IMG/M
3300032035\|Ga0310911_10048461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2203	Open in IMG/M
3300032060\|Ga0318505_10455537	Not Available	604	Open in IMG/M
3300032063\|Ga0318504_10245989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	841	Open in IMG/M
3300032076\|Ga0306924_10660671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1177	Open in IMG/M
3300032076\|Ga0306924_10948414	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300032076\|Ga0306924_11922687	Not Available	612	Open in IMG/M
3300032091\|Ga0318577_10493066	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300032261\|Ga0306920_102560164	Not Available	700	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.88%
Host-Associated	Host-Associated	2.34%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.88%
Plants	Host-Associated → Plants	2.34%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.34%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.47%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.12%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006935	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_02909320	2170459016	Switchgrass, Maize And Mischanthus Litter	LTAKELLRHWQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLP
AF_2010_repII_A01DRAFT_10578341	3300000580	Forest Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
AF_2010_repII_A1DRAFT_100874752	3300000597	Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
AF_2010_repII_A1DRAFT_101588091	3300000597	Forest Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGXKQXAARWWLREQELLPYVITXLATLIVGLIAWLK*
AF_2010_repII_A001DRAFT_100901801	3300000793	Forest Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALATLIVGLIAWLK*
JGI25384J37096_102112791	3300002561	Grasslands Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066395_106844912	3300004633	Tropical Forest Soil	EFKSLGIRQVKEREAHSIWHEEKQRAARWWLREQELLPYVLAALGTLIVGLIAWLK*
Ga0066821_10268231	3300005147	Soil	MATWREWRAWCREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066823_101113571	3300005163	Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0066672_109370212	3300005167	Soil	LRHWQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066680_105351201	3300005174	Soil	TEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066388_1013638222	3300005332	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQKAARWWLREQELLPYVLAALATLIVGLIAWLK*
Ga0066388_1049888563	3300005332	Tropical Forest Soil	NRADAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0008090_101029242	3300005363	Tropical Rainforest Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0008090_102040681	3300005363	Tropical Rainforest Soil	GQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQRAARWWLREQELLPYVLAALGTLIVGLIAWLK*
Ga0008090_155771762	3300005363	Tropical Rainforest Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQRAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0066704_105430861	3300005557	Soil	RAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066905_1004192842	3300005713	Tropical Forest Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALATLIVGLIAWLK*
Ga0066905_1014320672	3300005713	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAW
Ga0066903_1001137127	3300005764	Tropical Forest Soil	MATWREWRAWRRVFKSLGIRQVKEREARSIWHQEEQQAARWWLREQELLPYVITALATLIVGLITWLR*
Ga0066903_1004091042	3300005764	Tropical Forest Soil	MASWREWRAWRREFKSLGIQQVKEREARSIWHEEKQQAARWWLREQELLPYIITALATLIVGLIAWLK*
Ga0066903_1005544032	3300005764	Tropical Forest Soil	MATWRQRRAWRREFKSLGIRQVKERVAIASWHEEEGKQEAARRWLRKQELRPAIVTALATIIATIIVGVIAWLGLITWLMKPR*
Ga0066903_1006069872	3300005764	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSTWHEEKQQAARWWLREQELLPYVITALATLIVGLIVWLK*
Ga0066903_1023593112	3300005764	Tropical Forest Soil	RAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYILAALATLIAGLIAWLK*
Ga0066903_1028609883	3300005764	Tropical Forest Soil	VASWRERRAWRREFRSLGIRQTKDREAHSIWHEEKQQEARRWLRERELLPYFITGVATIIAALIAFAGGWL
Ga0066903_1056431841	3300005764	Tropical Forest Soil	RQVTGQMATWREWRAWRREFKSLGVRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0066903_1061578611	3300005764	Tropical Forest Soil	WRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQKLLPYVITALTTLIVGLIAWLR*
Ga0066903_1069227631	3300005764	Tropical Forest Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGL
Ga0066903_1076025971	3300005764	Tropical Forest Soil	RAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQALLPYVLAALATLIVGLIAWLK*
Ga0066903_1083411672	3300005764	Tropical Forest Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQRAARWWLREQELLPYVITGLATLIVGLIAWLK*
Ga0075432_101769681	3300006058	Populus Rhizosphere	MATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITAPATLIVGLIAWLR*
Ga0075425_1020088341	3300006854	Populus Rhizosphere	REFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0081246_13487102	3300006935	Tropical Rainforest Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHEEKQQAALVAREQELLPYVITALATLIVGFIAWLK*
Ga0074063_134705041	3300006953	Soil	WQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0066710_1030953981	3300009012	Grasslands Soil	TEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0114129_105642363	3300009147	Populus Rhizosphere	MATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLTVGLIAWLK*
Ga0126374_103815281	3300009792	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQALLPYVLAALATLIVGLIAWLK*
Ga0126380_119256511	3300010043	Tropical Forest Soil	GQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0126384_119380471	3300010046	Tropical Forest Soil	WRREFKSLGIRQVREREAHSIWHEEKQQAARWWLREQELLPYVLAALATFIVGLIAWLK*
Ga0126384_122544922	3300010046	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0126382_101665331	3300010047	Tropical Forest Soil	MATWREWRAWRREFKTLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLI
Ga0126382_101737561	3300010047	Tropical Forest Soil	TEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARLWLRERELLPYVIIALATLIVGLIAWLK*
Ga0126373_105898441	3300010048	Tropical Forest Soil	MATWREWRAWRRVFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLITWLR*
Ga0126373_115499771	3300010048	Tropical Forest Soil	NAVTGQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQRAARWWLREQELLPYVLAALGTLIVGLIAWLK*
Ga0126370_121140262	3300010358	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0126376_114924951	3300010359	Tropical Forest Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0126378_132352641	3300010361	Tropical Forest Soil	MATWQEWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLI
Ga0126377_113761371	3300010362	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWLAEKQQAARWWLRKQELLPYVITALATLIVGLIAWLK*
Ga0126379_103632653	3300010366	Tropical Forest Soil	EFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYILAALATLIVGLIAWLK*
Ga0126379_106908982	3300010366	Tropical Forest Soil	MATRRERRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARRWLREQELRPYVITALATVIAALIAFIGGWLK*
Ga0126379_107340501	3300010366	Tropical Forest Soil	ANAVTGQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQKAARWWLREQELLPYVLAALATLIVGLIAWLK*
Ga0126379_111725512	3300010366	Tropical Forest Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGFIAWLK*
Ga0126381_1030065271	3300010376	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQKAARWWLREQELLPYALAALATLIVGLIAWLK*
Ga0126381_1039864542	3300010376	Tropical Forest Soil	MGEDAVTGQISTWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0126383_103298222	3300010398	Tropical Forest Soil	WRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0126383_109505492	3300010398	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARLWLRERELLPYVIIALATLIVGLIAWLK*
Ga0126383_126573821	3300010398	Tropical Forest Soil	WRREFKSLGIRQVKEREAHSIWHEEKQLAARWWLREQELLPYVLAALATLIVGLIAWLK*
Ga0126383_126725142	3300010398	Tropical Forest Soil	EFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALGTLIVGLIAWLK*
Ga0126383_128167731	3300010398	Tropical Forest Soil	NRANAVTGQMATWREWRAWRREFKSLGIRQVREREAHSIWLEEKQQAARWWLWEQELLPYVLAALATLIVGLIAWLK*
Ga0126383_128907691	3300010398	Tropical Forest Soil	TWREWRAWRREFKSLGIRQVKEREARSTWHEEKQQAARWWLREQELLPYVITALATLIVGLIVWLK*
Ga0126383_136439281	3300010398	Tropical Forest Soil	TWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK*
Ga0137382_103146132	3300012200	Vadose Zone Soil	WRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0137374_108904351	3300012204	Vadose Zone Soil	MEAVGRREGVRGNPMASWRERRAWRREFRSLGIRQTRERKAHSIWHEEKLQEARRWLREQELRPYVIGALSAIIVGILALISGWLK*
Ga0137369_110982201	3300012355	Vadose Zone Soil	MEAVGRREGVRGNPMASWRERRAWRREFRSLGIRQTREREAHSIWHEEKLQEARRWLREQELRPYVIGALSAIIVGILALTSGWLK*
Ga0137360_107099371	3300012361	Vadose Zone Soil	KSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0137359_113291091	3300012923	Vadose Zone Soil	TWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR*
Ga0134081_101567431	3300014150	Grasslands Soil	LTAKELLRHWQIEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATL
Ga0182036_106144592	3300016270	Soil	MATWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWL
Ga0182033_102369931	3300016319	Soil	MATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALAT
Ga0182033_114530302	3300016319	Soil	FAALANRADAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0182033_114776411	3300016319	Soil	RWPRHWQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0182035_111836481	3300016341	Soil	GQMATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATFIVGLIAWLK
Ga0182032_114811491	3300016357	Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHAEKQQAARWWLREQELLPYVITALATLI
Ga0182034_101360111	3300016371	Soil	MATWREWRAWRREFKSLGIRQVKDREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0182040_104281622	3300016387	Soil	WRREFKSLGIRQVKEREARSIWHGEKQHAARWWLREQELLPYVITALATLVVGLIAWLK
Ga0134069_10991951	3300017654	Grasslands Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHAEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0126371_114969962	3300021560	Tropical Forest Soil	LRHWQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0207653_100258901	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	REWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0207693_102277362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MATWREWHAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0209801_12805362	3300026326	Soil	RRKFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0209180_100947883	3300027846	Vadose Zone Soil	GKTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLVRRQRF
Ga0209465_103090701	3300027874	Tropical Forest Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0209465_104370572	3300027874	Tropical Forest Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALGTLIVGLIAWLK
Ga0209590_107564061	3300027882	Vadose Zone Soil	WQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0209526_100800191	3300028047	Forest Soil	KSLGIRQVKEREARSIWHQEKQQAARWWLREQVLLPYVITALATLIVGLIAWLR
Ga0222749_102258112	3300029636	Soil	MATWREWRAWCREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLTVRIS
Ga0318541_101262154	3300031545	Soil	MATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATFIVGLI
Ga0318538_100813193	3300031546	Soil	MATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATFIVGLIAWLK
Ga0318528_101118555	3300031561	Soil	ELLRHWQTGQVIGQMATWREWRAWRREFKSLGVRQVKEREARSIWHAEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0310915_101008593	3300031573	Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQHAARWWLREQELLPYVITALATLVVGLIAWLK
Ga0310915_106298711	3300031573	Soil	RHWQTEQGTGQMATWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0318542_102938961	3300031668	Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHAEKQQAARWWLREQELLPYVITALATLIVGLIAWL
Ga0306917_101390852	3300031719	Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0306917_102143931	3300031719	Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYILAALATLIVGLIAWLK
Ga0306917_102511392	3300031719	Soil	MATWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0306917_111501501	3300031719	Soil	WRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0318501_102138682	3300031736	Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQHAARWWLREQELLPYVITALATLVVGLIAWLK
Ga0318492_102754232	3300031748	Soil	MTRIQTEQVTAQMATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATFIVGLIAWLK
Ga0318548_103283771	3300031793	Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0318550_102563931	3300031797	Soil	MATWREWRAWRREFKSLGIRQVKDREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAW
Ga0318568_105609191	3300031819	Soil	MATWREWRAWRREFKSLGVRQVKEREARSIWHAEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0318512_104166931	3300031846	Soil	KQRATGQMATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATFIVGLIAWLK
Ga0306925_113038372	3300031890	Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATL
Ga0306925_113302282	3300031890	Soil	WREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALATLIVGLIAWLK
Ga0306925_120354291	3300031890	Soil	GQMATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLVALATLVVGLIAWLK
Ga0306925_121910281	3300031890	Soil	TWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0306923_103271513	3300031910	Soil	AVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQHAARWWLREQELLPYVITALATLVVGLIAWLK
Ga0306923_121033732	3300031910	Soil	AVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0306921_105173794	3300031912	Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLI
Ga0310912_100612605	3300031941	Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLVVGLIAWLK
Ga0310912_104262883	3300031941	Soil	EFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0310912_113454372	3300031941	Soil	ATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0310912_113903731	3300031941	Soil	WREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0310916_102904363	3300031942	Soil	ELLRHRQTEQVTGQMATWREWRAWRREFKSLGIWQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0310910_104135792	3300031946	Soil	MATWREWRAWRREFKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALATLIVGLIAWLK
Ga0310910_115717511	3300031946	Soil	RADAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0310909_111375812	3300031947	Soil	MATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALAALIVGLIAWLK
Ga0310909_111947491	3300031947	Soil	MATWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITAL
Ga0306926_125394842	3300031954	Soil	WRREFKSLGIRQVKEREARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0318507_105114312	3300032025	Soil	KSFCGTQTEQVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0310911_100484611	3300032035	Soil	QMATWREWRAWRREFKTLGIRQVKEREARSIWQEEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0318505_104555372	3300032060	Soil	MATWREWRAWRREFKSLGIRQVKERNEARSIWHEEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0318504_102459892	3300032063	Soil	EQVTGQMATWREWRAWRREFKSLGIRQVKDREARSIWHQEKQQAARWWLREQELLPYVITALATLIVGLIAWLR
Ga0306924_106606711	3300032076	Soil	VTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITALATLIVGLIAWLK
Ga0306924_109484141	3300032076	Soil	REFKSLGIRQVKEREAHSIWHEEKQKAARWWLREQELLPYVLAALATLIVGLIAWLK
Ga0306924_119226871	3300032076	Soil	MGEDAVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQQAARWWLREQELLPYVITA
Ga0318577_104930662	3300032091	Soil	FKSLGIRQVKEREAHSIWHEEKQQAARWWLREQELLPYVLAALATLIVGLIAWLK
Ga0306920_1025601642	3300032261	Soil	SRANGRRPVTGQMATWREWRAWRREFKSLGIRQVKEREARSIWHGEKQRAARWWLREQELLPYVITGLATLIVGLIAWLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences