Metagenome Family F064455

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064455
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	50 residues
Representative Sequence	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAV
Number of Associated Samples	95
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.40 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.906 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (70.312 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (73.438 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 1.96% Coil/Unstructured: 68.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF03462	PCRF	11.72
PF00202	Aminotran_3	2.34
PF01668	SmpB	1.56
PF04230	PS_pyruv_trans	0.78
PF00005	ABC_tran	0.78
PF01565	FAD_binding_4	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	11.72
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	11.72
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	1.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
All Organisms	root	All Organisms	21.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
cellular organisms	root	All Organisms → cellular organisms	21.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Candidatus Nanopelagicales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	17.97 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Candidatus Nanopelagicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae	17.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Candidatus Nanopelagicus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	17.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.91 %
Candidatus Nanopelagicus limnes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	4.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003413\|JGI25922J50271_10011810	Not Available	2337	Open in IMG/M
3300003413\|JGI25922J50271_10019994	Not Available	1699	Open in IMG/M
3300005517\|Ga0070374_10482463	Not Available	619	Open in IMG/M
3300005527\|Ga0068876_10084965	Not Available	1896	Open in IMG/M
3300005581\|Ga0049081_10127333	Not Available	940	Open in IMG/M
3300005805\|Ga0079957_1129204	Not Available	1320	Open in IMG/M
3300006863\|Ga0075459_1013765	Not Available	1327	Open in IMG/M
3300006875\|Ga0075473_10072831	Not Available	1344	Open in IMG/M
3300007162\|Ga0079300_10157266	Not Available	613	Open in IMG/M
3300007165\|Ga0079302_1032806	Not Available	1253	Open in IMG/M
3300007546\|Ga0102874_1230301	Not Available	564	Open in IMG/M
3300008114\|Ga0114347_1265557	Not Available	514	Open in IMG/M
3300008261\|Ga0114336_1018711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5965	Open in IMG/M
3300008961\|Ga0102887_1045781	Not Available	1456	Open in IMG/M
3300009068\|Ga0114973_10196559	Not Available	1103	Open in IMG/M
3300009068\|Ga0114973_10277144	Not Available	898	Open in IMG/M
3300009068\|Ga0114973_10307858	Not Available	843	Open in IMG/M
3300009151\|Ga0114962_10444709	Not Available	694	Open in IMG/M
3300009152\|Ga0114980_10245337	Not Available	1046	Open in IMG/M
3300009152\|Ga0114980_10398092	Not Available	790	Open in IMG/M
3300009152\|Ga0114980_10623121	Not Available	608	Open in IMG/M
3300009152\|Ga0114980_10649686	Not Available	593	Open in IMG/M
3300009152\|Ga0114980_10661669	Not Available	587	Open in IMG/M
3300009158\|Ga0114977_10603644	Not Available	591	Open in IMG/M
3300009159\|Ga0114978_10202433	Not Available	1254	Open in IMG/M
3300009182\|Ga0114959_10369683	Not Available	705	Open in IMG/M
3300009183\|Ga0114974_10794391	Not Available	508	Open in IMG/M
3300009184\|Ga0114976_10178380	Not Available	1179	Open in IMG/M
3300009184\|Ga0114976_10491066	Not Available	634	Open in IMG/M
3300009187\|Ga0114972_10401105	Not Available	791	Open in IMG/M
3300010158\|Ga0114960_10067545	Not Available	2063	Open in IMG/M
3300010160\|Ga0114967_10062713	Not Available	2284	Open in IMG/M
3300010160\|Ga0114967_10240677	Not Available	953	Open in IMG/M
3300010160\|Ga0114967_10347273	Not Available	751	Open in IMG/M
3300010354\|Ga0129333_10742783	Not Available	841	Open in IMG/M
3300010354\|Ga0129333_11178068	Not Available	637	Open in IMG/M
3300010885\|Ga0133913_12194923	Not Available	1362	Open in IMG/M
3300010885\|Ga0133913_12388772	Not Available	1293	Open in IMG/M
3300012006\|Ga0119955_1050044	Not Available	1302	Open in IMG/M
3300012013\|Ga0153805_1065878	Not Available	613	Open in IMG/M
3300013004\|Ga0164293_10163399	Not Available	1642	Open in IMG/M
3300013006\|Ga0164294_10168168	Not Available	1573	Open in IMG/M
3300013014\|Ga0164295_11274341	Not Available	570	Open in IMG/M
3300018790\|Ga0187842_1076687	Not Available	1026	Open in IMG/M
3300018815\|Ga0187845_1263064	Not Available	546	Open in IMG/M
3300018868\|Ga0187844_10097459	Not Available	1330	Open in IMG/M
3300018868\|Ga0187844_10266489	Not Available	720	Open in IMG/M
3300019093\|Ga0187843_10102950	Not Available	1280	Open in IMG/M
3300020074\|Ga0194113_10370345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300020205\|Ga0211731_10152280	Not Available	1253	Open in IMG/M
3300020222\|Ga0194125_10272948	Not Available	1140	Open in IMG/M
3300020512\|Ga0207936_1003412	Not Available	2885	Open in IMG/M
3300020518\|Ga0208721_1022431	Not Available	800	Open in IMG/M
3300020525\|Ga0207938_1033555	Not Available	788	Open in IMG/M
3300020561\|Ga0207934_1038888	Not Available	808	Open in IMG/M
3300020563\|Ga0208082_1008965	Not Available	2380	Open in IMG/M
3300021140\|Ga0214168_1094933	Not Available	645	Open in IMG/M
3300021340\|Ga0194041_10142039	Not Available	738	Open in IMG/M
3300021516\|Ga0194045_1110381	Not Available	685	Open in IMG/M
3300021961\|Ga0222714_10175685	Not Available	1259	Open in IMG/M
3300021962\|Ga0222713_10286331	Not Available	1056	Open in IMG/M
3300021962\|Ga0222713_10843852	Not Available	507	Open in IMG/M
3300021963\|Ga0222712_10002418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21402	Open in IMG/M
3300021963\|Ga0222712_10122236	Not Available	1791	Open in IMG/M
3300023174\|Ga0214921_10038332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4494	Open in IMG/M
3300023179\|Ga0214923_10111710	Not Available	1810	Open in IMG/M
3300023184\|Ga0214919_10037702	Not Available	4872	Open in IMG/M
3300023184\|Ga0214919_10234762	Not Available	1333	Open in IMG/M
3300024289\|Ga0255147_1083686	Not Available	595	Open in IMG/M
3300025091\|Ga0209616_1012250	Not Available	888	Open in IMG/M
3300025445\|Ga0208424_1021535	Not Available	756	Open in IMG/M
3300027114\|Ga0208009_1014818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1836	Open in IMG/M
3300027114\|Ga0208009_1026289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1253	Open in IMG/M
3300027150\|Ga0255112_1082021	Not Available	607	Open in IMG/M
3300027153\|Ga0255083_1086358	Not Available	587	Open in IMG/M
3300027155\|Ga0255081_1025630	Not Available	1318	Open in IMG/M
3300027292\|Ga0255134_1060602	Not Available	603	Open in IMG/M
3300027697\|Ga0209033_1067013	Not Available	1243	Open in IMG/M
3300027708\|Ga0209188_1115715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1054	Open in IMG/M
3300027712\|Ga0209499_1095778	Not Available	1134	Open in IMG/M
3300027733\|Ga0209297_1128312	Not Available	1061	Open in IMG/M
3300027733\|Ga0209297_1172034	Not Available	877	Open in IMG/M
3300027734\|Ga0209087_1040850	Not Available	2167	Open in IMG/M
3300027734\|Ga0209087_1143851	Not Available	964	Open in IMG/M
3300027734\|Ga0209087_1185881	Not Available	808	Open in IMG/M
3300027736\|Ga0209190_1351574	Not Available	545	Open in IMG/M
3300027749\|Ga0209084_1088196	Not Available	1390	Open in IMG/M
3300027754\|Ga0209596_1132852	Not Available	1128	Open in IMG/M
3300027756\|Ga0209444_10084714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1332	Open in IMG/M
3300027759\|Ga0209296_1089134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1499	Open in IMG/M
3300027759\|Ga0209296_1112158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1284	Open in IMG/M
3300027760\|Ga0209598_10171004	Not Available	945	Open in IMG/M
3300027785\|Ga0209246_10175527	Not Available	841	Open in IMG/M
3300027806\|Ga0209985_10171942	Not Available	1051	Open in IMG/M
3300027969\|Ga0209191_1035076	Not Available	2381	Open in IMG/M
3300027971\|Ga0209401_1124935	Not Available	1032	Open in IMG/M
3300027973\|Ga0209298_10144921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1003	Open in IMG/M
3300027973\|Ga0209298_10167390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	916	Open in IMG/M
3300027973\|Ga0209298_10327504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	591	Open in IMG/M
3300028027\|Ga0247722_10042804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	1778	Open in IMG/M
3300028027\|Ga0247722_10138260	Not Available	883	Open in IMG/M
3300028066\|Ga0255200_1049369	Not Available	604	Open in IMG/M
3300028091\|Ga0255184_1037494	Not Available	996	Open in IMG/M
3300028394\|Ga0304730_1095172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1306	Open in IMG/M
3300028394\|Ga0304730_1103313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1231	Open in IMG/M
3300028394\|Ga0304730_1120235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1103	Open in IMG/M
3300028394\|Ga0304730_1122721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	1087	Open in IMG/M
3300028394\|Ga0304730_1188533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	792	Open in IMG/M
3300028394\|Ga0304730_1226211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	689	Open in IMG/M
3300031784\|Ga0315899_11104834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	695	Open in IMG/M
3300031784\|Ga0315899_11517190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	560	Open in IMG/M
3300031787\|Ga0315900_11081619	Not Available	518	Open in IMG/M
3300032050\|Ga0315906_10186882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	1964	Open in IMG/M
3300032093\|Ga0315902_10094176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus	3263	Open in IMG/M
3300032093\|Ga0315902_11161468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	559	Open in IMG/M
3300032116\|Ga0315903_11011759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales → Candidatus Nanopelagicaceae → Candidatus Nanopelagicus → Candidatus Nanopelagicus limnes	580	Open in IMG/M
3300033992\|Ga0334992_0194916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	1010	Open in IMG/M
3300033996\|Ga0334979_0185689	Not Available	1235	Open in IMG/M
3300034060\|Ga0334983_0182457	Not Available	1311	Open in IMG/M
3300034062\|Ga0334995_0773465	Not Available	529	Open in IMG/M
3300034121\|Ga0335058_0222264	Not Available	1102	Open in IMG/M
3300034167\|Ga0335017_0318551	Not Available	862	Open in IMG/M
3300034168\|Ga0335061_0293521	Not Available	851	Open in IMG/M
3300034284\|Ga0335013_0513048	Not Available	715	Open in IMG/M
3300034356\|Ga0335048_0244053	Not Available	963	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.31%
Terrestrial	Environmental → Terrestrial	4.69%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.94%
Marine	Environmental → Aquatic → Marine	9.38%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.69%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	61.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.25%
River	Environmental → Aquatic → Freshwater → River	5.47%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.69%
Coastal	Environmental → Aquatic → Marine → Coastal	3.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.56%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	61.72%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	5.47%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.69%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.91%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.91%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	37.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.47%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.47%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	5.47%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.12%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.34%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.34%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.56%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.56%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.56%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.78%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.78%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.78%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007165	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020512	Freshwater microbial communities from Lake Mendota, WI - 19NOV2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020518	Freshwater microbial communities from Lake Mendota, WI - 17AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020525	Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020561	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025445	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027150	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8h	Environmental	Open in IMG/M
3300027153	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h	Environmental	Open in IMG/M
3300027155	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8h	Environmental	Open in IMG/M
3300027292	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028066	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepB_8h	Environmental	Open in IMG/M
3300028091	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0h	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25922J50271_100118105	3300003413	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQI
JGI25922J50271_100199945	3300003413	Freshwater Lake	MIVIKDSTDPRLLLNKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0070374_104824633	3300005517	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAVVI
Ga0068876_100849651	3300005527	Freshwater Lake	MVSKDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQ
Ga0049081_101273334	3300005581	Freshwater Lentic	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVS
Ga0079957_11292041	3300005805	Lake	MVINDSTEPRLFNLSRLRNYLMPPIASRELRNIVVSLGAAIDHI
Ga0075459_10137651	3300006863	Aqueous	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTR
Ga0075473_100728314	3300006875	Aqueous	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTN
Ga0079300_101572663	3300007162	Deep Subsurface	MVSSDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVVIS
Ga0079302_10328064	3300007165	Deep Subsurface	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIP
Ga0102874_12303011	3300007546	Estuarine	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVS
Ga0114344_11553562	3300008111	Freshwater, Plankton	TDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTHPGTSPLLLP*
Ga0114347_12655571	3300008114	Freshwater, Plankton	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTQP
Ga0114336_10187115	3300008261	Freshwater, Plankton	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTSFYHEACDLNWH*
Ga0102887_10457815	3300008961	Estuarine	LGIIVKKDSTDPRDFASKNLRNYLIPPIASKELRKIVVSFGAAIDQMPVTKAVVIK
Ga0114973_101965594	3300009068	Freshwater Lake	MIVIKDSTDPPVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0114973_102771444	3300009068	Freshwater Lake	MNDSTDPRLFPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPV
Ga0114973_103078584	3300009068	Freshwater Lake	MNTCGMIVMKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPV
Ga0114962_104447093	3300009151	Freshwater Lake	MIVMNDSTDPRLFSNKSLRNYLIPPIASKELRKIVVSFGAAIDQIP
Ga0114980_102453374	3300009152	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0114980_102965851	3300009152	Freshwater Lake	MNTCGMIVMKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTSTQPGTSPRL
Ga0114980_103980923	3300009152	Freshwater Lake	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSF
Ga0114980_106231213	3300009152	Freshwater Lake	MKINTCGMIVMKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0114980_106496863	3300009152	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAID
Ga0114980_106616693	3300009152	Freshwater Lake	MKINTCGMIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0114977_106036441	3300009158	Freshwater Lake	MIVIKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTST
Ga0114978_102024331	3300009159	Freshwater Lake	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAI
Ga0114959_103696831	3300009182	Freshwater Lake	MNDSTDPRLFSNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTK
Ga0114974_107943911	3300009183	Freshwater Lake	MIVIKDSTDPPVLPNKSLRNYLIPPIASKELRKIVVSFGAAI
Ga0114976_101783804	3300009184	Freshwater Lake	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGA
Ga0114976_104910663	3300009184	Freshwater Lake	MKINTCGMIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVI
Ga0114972_104011053	3300009187	Freshwater Lake	MNTCGMIVMKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0114960_100675455	3300010158	Freshwater Lake	MIVMNDSTDPRLFSNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIK
Ga0114967_100627135	3300010160	Freshwater Lake	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAV
Ga0114967_102406771	3300010160	Freshwater Lake	MIVIKDSTDPPVLPNKSLRNYLIPPIASKELRKIVVSF
Ga0114967_102643191	3300010160	Freshwater Lake	STDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTSTQPGTSPLLLP*
Ga0114967_103472731	3300010160	Freshwater Lake	MIVIKDSTDPRLFPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0129333_107427833	3300010354	Freshwater To Marine Saline Gradient	MIKKDSTDPRDFESKNLRNYLIPPIASKELRKLVVSFGAAIDHIPVTRAVVIKTTNTQP
Ga0129333_111780681	3300010354	Freshwater To Marine Saline Gradient	MVSNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQI
Ga0133913_121949231	3300010885	Freshwater Lake	MIVIKDSTDPPVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0133913_123887724	3300010885	Freshwater Lake	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQ
Ga0119955_10500441	3300012006	Freshwater	MNTWGITVINDSTDPLLLLNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTST
Ga0153805_10658783	3300012013	Surface Ice	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTQPG
Ga0164293_101633991	3300013004	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSL
Ga0164294_101681685	3300013006	Freshwater	MIVIKDSTDPRLFPNNSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIK
Ga0164295_112743411	3300013014	Freshwater	MIVKNDSTEPRLLPNKSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVVIKTTSTQPGTSPLL
Ga0187842_10766873	3300018790	Freshwater	MIVMKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTK
Ga0187845_12630641	3300018815	Freshwater	MIVIKDSTDPRFLANKNLRNYLIPPIASKELRKIVVSF
Ga0187844_100974594	3300018868	Freshwater	MIVIKASTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTNTQPGT
Ga0187844_102664893	3300018868	Freshwater	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTNTQPGT
Ga0187843_101029504	3300019093	Freshwater	MIVIKASTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0194113_103703454	3300020074	Freshwater Lake	MVINDSTEPRPFDLSRLRNYLMPPIASRELRNIVVSLGAA
Ga0211731_101522804	3300020205	Freshwater	MIVIKDSTDPRLLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIK
Ga0194125_102729481	3300020222	Freshwater Lake	MVINDSTEPRPFDLSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTRAVVIRTTNTQPG
Ga0207936_10034121	3300020512	Freshwater	MVINDSTEPRLFNLSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTR
Ga0208721_10224311	3300020518	Freshwater	MVINDSTEPRLFNLSRLRNYLMPPIASRELRNIVVSLGAAIDH
Ga0207938_10335553	3300020525	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTRAVVIRTT
Ga0207934_10388881	3300020561	Freshwater	MVSSDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVVISTTNTQPGTSP
Ga0208082_10089651	3300020563	Freshwater	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVSFGAAIDQMPVTKAVVIKTTNTQPG
Ga0214168_10949331	3300021140	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSFGAAIDHIP
Ga0194041_101420391	3300021340	Anoxic Zone Freshwater	MIVKNDSTEPRLLPNKSLRNYLIPPIASNELRKIVVSFGAAID
Ga0194045_11103811	3300021516	Anoxic Zone Freshwater	MIVIKDSTDPRLFPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTNT
Ga0222714_101756854	3300021961	Estuarine Water	MVSNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAID
Ga0222713_102863311	3300021962	Estuarine Water	MVSNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAV
Ga0222713_108438521	3300021962	Estuarine Water	MIKNDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQMPV
Ga0222712_100024181	3300021963	Estuarine Water	MIKKDSTDPRDFESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPV
Ga0222712_101222365	3300021963	Estuarine Water	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAVV
Ga0214921_100383328	3300023174	Freshwater	MKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0214923_101117105	3300023179	Freshwater	MIVINDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTT
Ga0214919_100377021	3300023184	Freshwater	MNDSTDPRLFPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTT
Ga0214919_102347621	3300023184	Freshwater	MIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0255147_10836861	3300024289	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSFGAAIDQIPVTNAVV
Ga0209616_10122501	3300025091	Freshwater	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTQ
Ga0208424_10215353	3300025445	Aqueous	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVV
Ga0208009_10148185	3300027114	Deep Subsurface	MIKKDSTDPRDFESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTQPG
Ga0208009_10262894	3300027114	Deep Subsurface	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKILVSLGAAIDQIP
Ga0255112_10820213	3300027150	Freshwater	MVSSDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVVISTTNTQP
Ga0255083_10863581	3300027153	Freshwater	MIVIKDSTDPRLLLNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPV
Ga0255081_10256301	3300027155	Freshwater	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAV
Ga0255134_10606021	3300027292	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTKAVVIKTTNTQPGTSP
Ga0209033_10670134	3300027697	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAI
Ga0209188_11157154	3300027708	Freshwater Lake	MNDSTDPRLFSNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0209499_10957784	3300027712	Freshwater Lake	MIVINDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKA
Ga0209297_11283124	3300027733	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGA
Ga0209297_11720341	3300027733	Freshwater Lake	MIVINDSTDPRSLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTK
Ga0209087_10408505	3300027734	Freshwater Lake	MIVIKDSTDPRLLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIP
Ga0209087_11438514	3300027734	Freshwater Lake	MIVIKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKA
Ga0209087_11858811	3300027734	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAA
Ga0209190_13515743	3300027736	Freshwater Lake	MIVKNDSTEPRLLPNKSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVV
Ga0209084_10881961	3300027749	Freshwater Lake	MKTCGMIVIKDSTDPPVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTTNTQP
Ga0209596_11328524	3300027754	Freshwater Lake	MIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTK
Ga0209444_100847144	3300027756	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAVVIKTTNTQPG
Ga0209296_10891341	3300027759	Freshwater Lake	MIVINDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTK
Ga0209296_11121584	3300027759	Freshwater Lake	MIVINDSTDPRSLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAV
Ga0209598_101710041	3300027760	Freshwater Lake	MKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKTT
Ga0209246_101755271	3300027785	Freshwater Lake	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVV
Ga0209985_101719424	3300027806	Freshwater Lake	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTKAV
Ga0209191_10350761	3300027969	Freshwater Lake	MIVINDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVVIKT
Ga0209401_11249354	3300027971	Freshwater Lake	MIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVV
Ga0209298_101449214	3300027973	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAI
Ga0209298_101673901	3300027973	Freshwater Lake	MIVINDSTDPRSLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVV
Ga0209298_103275043	3300027973	Freshwater Lake	MIVMKDSTDPRFLANKSLRNYLIPPIASNELRKIVVSFGAAIDQIPVTKAVVIKTTSTQPGTSPR
Ga0247722_100428041	3300028027	Deep Subsurface Sediment	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAV
Ga0247722_101382601	3300028027	Deep Subsurface Sediment	KDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIKTTNTHPGTSPLLLP
Ga0255200_10493691	3300028066	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAVVIKTTNTQ
Ga0255184_10374941	3300028091	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPV
Ga0304730_10951721	3300028394	Freshwater Lake	MIVINDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGAAIDQIP
Ga0304730_11033134	3300028394	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAVV
Ga0304730_11202354	3300028394	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVV
Ga0304730_11227214	3300028394	Freshwater Lake	MIVIKDSTDPRFLANKSLRNYLIPPIASKELRKIVVSFGAAIDQIPVTKAV
Ga0304730_11885333	3300028394	Freshwater Lake	MIVMKDSTDPRFLPNKSLRNYLIPPIASKELRKIVVSFGA
Ga0304730_12262111	3300028394	Freshwater Lake	MIVIKDSTDPRVLPNKSLRNYLIPPIASKELRKIVV
Ga0315899_111048341	3300031784	Freshwater	MVSSDSTDPRCWASSSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKA
Ga0315899_115171901	3300031784	Freshwater	MIVIKDSTDPRLLLNKSLRNYLIPPIASKELRKIVVSFGAA
Ga0315900_110816191	3300031787	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSFGAAIDHIPVTKAVVIKTTKTQPGTS
Ga0315906_101868821	3300032050	Freshwater	MVSKDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQMPVTKAVVISTTNTQPG
Ga0315902_100941766	3300032093	Freshwater	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIK
Ga0315902_111614683	3300032093	Freshwater	MVSSDSTDPRCWASSSLRNYLIPPIASNELRKIVVSFGAAIDQIPVTKAV
Ga0315903_110117593	3300032116	Freshwater	MVSKDSTDPRCWASNSLRNYLIPPIASNELRKIVVSFGAAIDQIPVTKAVVISTT
Ga0334992_0194916_2_178	3300033992	Freshwater	MVRNDSTDPRLWASNSLRNYLIPPIASNELRKIVVSLGAAIDQIPVTNAVVIKTTNTQP
Ga0334979_0185689_1_159	3300033996	Freshwater	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQIPVTRAVVIK
Ga0334983_0182457_3_125	3300034060	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSLGAAI
Ga0334995_0773465_344_529	3300034062	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTKAVVIKTTKTQPGTS
Ga0335058_0222264_946_1101	3300034121	Freshwater	MVINDSTEPRLFNLSRLRNYLMPPIASRELRNIVVSLGAAIDHIPVTRAVVI
Ga0335017_0318551_1_177	3300034167	Freshwater	MVINDSTEPRFFELSRLRNYLMPPIASRELRNIVVSFGAAIDHIPVTKAVVIKTTKTQP
Ga0335061_0293521_1_165	3300034168	Freshwater	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVSFGAAIDQMPVTKAVVIKTT
Ga0335013_0513048_582_713	3300034284	Freshwater	MIKKDSTDPRDLESKNLRNYLIPPIASKELRKIVVSFGAAIDQI
Ga0335048_0244053_2_124	3300034356	Freshwater	MIKKDSTDPRELESKNLRNYLIPPIASKELRKIVVSFGAAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences