Metagenome Family F064435

Overview

Basic Information

• Family ID: F064435
• Family Type: Metagenome
• Number of Sequences: 128
• Average Sequence Length: 48 residues
• Representative Sequence: MAPSRRTPQSSQGDVPDIARAIEAMVAAMTQQSTAMMQQHEASMQR
• Number of Associated Samples: 8
• Number of Associated Scaffolds: 128

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 6
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (89.844 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules (52.344 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 47.30%
  β-sheet: 0.00%
  Coil/Unstructured: 52.70%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF08284	RVP_2	24.22
PF03732	Retrotrans_gag	16.41
PF00078	RVT_1	13.28
PF00665	rve	3.91
PF01501	Glyco_transf_8	1.56
PF07727	RVT_2	1.56
PF14223	Retrotran_gag_2	1.56
PF13976	gag_pre-integrs	1.56
PF13966	zf-RVT	0.78
PF13960	DUF4218	0.78
PF00069	Pkinase	0.78
PF05834	Lycopene_cycl	0.78
PF00982	Glyco_transf_20	0.78
PF03081	Exo70	0.78
PF13963	Transpos_assoc	0.78
PF02992	Transposase_21	0.78
PF00098	zf-CCHC	0.78
PF00108	Thiolase_N	0.78
PF15159	PIG-Y	0.78
PF00293	NUDIX	0.78
PF05970	PIF1	0.78
PF00201	UDPGT	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	3.91
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	3.91
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	3.91
COG4584	Transposase	Mobilome: prophages, transposons [X]	3.91
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG1442	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.56
COG5597	N-acetylglucosaminyl transferase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.78
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.78
COG0507	ATPase/5’-3’ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.78

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
All Organisms	root	All Organisms	10.16 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
cellular organisms	root	All Organisms → cellular organisms	10.16 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	10.16 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	10.16 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	10.16 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	10.16 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	10.16 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	10.16 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	10.16 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	10.16 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	10.16 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	10.16 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	10.16 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	10.16 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	10.16 %

Level 16

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	10.16 %

Level 17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	10.16 %

Level 18

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	10.16 %

Level 19

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	10.16 %

Level 20

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	10.16 %

Level 21

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	10.16 %

Level 22

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
NPAAA clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade	10.16 %

Level 23

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
indigoferoid/millettioid clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade	10.16 %

Level 24

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Phaseoleae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	10.16 %

Level 25

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Vigna	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	8.59 %
Glycine	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine	0.78 %

Level 26

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Vigna unguiculata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	8.59 %
Glycine subgen. Soja	subgenus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja	0.78 %

Level 27

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.84 %
Vigna unguiculata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	8.59 %
Glycine max	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	0.78 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300006943|Ga0099822_1002133	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	24287
3300006943|Ga0099822_1007500	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	14098
3300006943|Ga0099822_1041126	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	2514
3300021320|Ga0214544_1000091	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	117959
3300021320|Ga0214544_1000172	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	100458
3300021320|Ga0214544_1000313	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	83289
3300021320|Ga0214544_1004045	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	29735
3300021320|Ga0214544_1006100	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	22633
3300021320|Ga0214544_1006170	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	22415
3300021320|Ga0214544_1007578	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	18907
3300021320|Ga0214544_1015812	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	7639
3300021320|Ga0214544_1018224	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	5927
3300021321|Ga0214542_1004571	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	27326

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Category

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	52.34%
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	47.66%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300006943	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW	Host-Associated
3300006944	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW	Host-Associated
3300021320	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3	Host-Associated
3300021321	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1	Host-Associated
3300021324	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4	Host-Associated
3300021327	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2	Host-Associated
3300027296	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes)	Host-Associated
3300027357	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099822_100194026	3300006943	Root Nodules	MAPHRRTSQCSQGDAPDIARALEVMVVVMTQQSTAMMQQ*
Ga0099822_10021338	3300006943	Root Nodules	VIMAPPRRTYQSSQGNVPDIARAIEELVAVMTQQSIAMMQQHGA*
Ga0099822_100487512	3300006943	Root Nodules	MAPHRRNAQSSQGDAPDIARAIEAMVATMAQQSTAMMQQHEASMQRQAVSLE*
Ga0099822_100632324	3300006943	Root Nodules	MAPPRKTPQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHEASMQR
Ga0099822_100691015	3300006943	Root Nodules	MAPPCRTSQSSQGDVPDIARAIETMVETMTQQSTAMIQQHEALMQR*
Ga0099822_10070239	3300006943	Root Nodules	MAPPCRTSQSSQGDVPDIARAIEAMVTAMTQQSTAMMQQHETSMQR*
Ga0099822_10075002	3300006943	Root Nodules	MAPPRRTSQVSQGDVPDIARAIETLVVAMTQQSTAMMQ*
Ga0099822_100790613	3300006943	Root Nodules	MTPQRRNSQPSQDDAPDIARAIEAMVAAMAQQSTVMMQQHEASMQRQAASLEQ*
Ga0099822_100940417	3300006943	Root Nodules	MAPHHRTSQSSQGDVPNIARAIEVMMAAMTQQSTTMMQQHEASM*
Ga0099822_101024912	3300006943	Root Nodules	MAPPCRDTQPSQDDVPDIARAIEAMVAAMTQQSMAMMQQHEASM*
Ga0099822_10122719	3300006943	Root Nodules	MAPSRRTPQSSQGDVPDIAKAIEVMVAAMTQQSTTMMQ*
Ga0099822_10145132	3300006943	Root Nodules	MVFYVPVIMAPPRRDSQSSQGDVPDIARAIEAMVATMTQQSTVMMQQHEA*
Ga0099822_10158487	3300006943	Root Nodules	MVFFSVCQSIMAPHRRTSQSSQGDVPNIARAIEAMVAAMTQQSTTMIQQHEASMQRQVASL*
Ga0099822_10160071	3300006943	Root Nodules	MVPHRRTSQSSQGDAPDIARAIEAMVTAITQQSTAMMQQHEASMQRQAVSLEQE*
Ga0099822_101642714	3300006943	Root Nodules	MAPPCKTSQSSQGDEPDIARAIEAMVAAMTQQSTVMMQQHEDSMQQQAASLK*
Ga0099822_10179304	3300006943	Root Nodules	MVFSMPMTMAPPRRTSQSSLGDVPDIARAIEAMVAAMTQQSTTMMQQHEASIQR*
Ga0099822_10196827	3300006943	Root Nodules	MAPHRRNAQSSQGDAPDIARAIEAMVAAMAQQSTAMMQQHEASM*
Ga0099822_10202471	3300006943	Root Nodules	MAPSRRTPQSSQGDVRGIDRAIEAMVAAMTQQSTTMMQHHEALMQRQAGRLSNNS*
Ga0099822_102111211	3300006943	Root Nodules	MAPSRRTPQSSQGDVPDIARAIEAMVAAMTQQSTAMMQQHEASMQR*
Ga0099822_10215361	3300006943	Root Nodules	MAPHRKNSQSSQGDAPDIARAIEAMVAAMTQQSMAMMQ*
Ga0099822_10232832	3300006943	Root Nodules	MTPHRRNSQSSQGDVIDITKAIEAMVAAMTQQSMTMMQQHEASMQRHTASLEQQQLVM*
Ga0099822_10258255	3300006943	Root Nodules	MAPHRRTSQSSQGDAPDIARAIEAMVAAMTQQSTAMMQQHEASIQR*
Ga0099822_10277742	3300006943	Root Nodules	MAPQRRNSQPSQGDAPDIAKAIEAMVTAMTQQSTTMMQQHEASMQRQAASLEQQ*
Ga0099822_10316206	3300006943	Root Nodules	MAPSHRIPQSSQGDVQDIARAIEAMVAAMTHQSTVMMQQHEASMQ*
Ga0099822_10326836	3300006943	Root Nodules	MAPPRTTSQSSQGDVPDIAKAIEAIVAAMTQQSTAMMQ*
Ga0099822_10338351	3300006943	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVATMAQQSAAMMQQHEASM*
Ga0099822_10350352	3300006943	Root Nodules	MAPHHRTSQSSQGDAPDIARAIEAMVAAMIQQSTTMMQQHEASM*
Ga0099822_10359802	3300006943	Root Nodules	MAPPRRNSQSSQGDVPDIARAIEALMAAMTQHSTTMMQQHEASMQRHVASLE*
Ga0099822_10395782	3300006943	Root Nodules	MAPQRRNSQSSQGDALDIARAIEAMVAAMTQQSTSMMQQHEASMQ*
Ga0099822_10411261	3300006943	Root Nodules	MALPRRASQSSQGDTPDIARAIEAMVAAMAQQSTAMMQHHEASMQRQAASLEQ*
Ga0099822_10428744	3300006943	Root Nodules	MAPHRRTSQSSQGDAHDIARAIKAMVAAMTEQSMAMMQQHEASMQ*
Ga0099822_10475954	3300006943	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVAAMAQQSAAMMQ
Ga0099822_10497422	3300006943	Root Nodules	MAPPRRTPQSSQGDVPDIARAIEAMVVAMTQQRTAMMQ*
Ga0099822_10497693	3300006943	Root Nodules	MAPSRRTPQSSQGDLLDIARAIEAIVATMTQQSTTMMQQHEASMQRRAATIEQQQLVM*
Ga0099822_10535613	3300006943	Root Nodules	PQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHEASMQRQAASLEQQ*
Ga0099822_10547542	3300006943	Root Nodules	MIPPRRTPQSSQGDVPDITRVIEAMVATIMQQSTAMMHQHEASVQRQAASLE
Ga0099822_10578392	3300006943	Root Nodules	MTPPRRTSQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHGASMQRQATSLEQQ*
Ga0099822_10647404	3300006943	Root Nodules	RTQQFSPGNVPDISRAIEAMVSAMTQQSTTMMQQHEASM*
Ga0099822_10676532	3300006943	Root Nodules	MCQWTMAPPRRTSQSSQGDAPDIARAIEAMVATMAQQSAAMMQQHEASMQRQAASLEQQ*
Ga0099822_10678142	3300006943	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVAAMTQQSAAMMQQHEASMQRQAASLE*
Ga0099822_10723941	3300006943	Root Nodules	MGPHRKTSQSSQGDAPDIGKAIEEMLAAMTQESTTMMQQYEASMQRQAALLK*
Ga0099822_10786201	3300006943	Root Nodules	MAPPRRTPQSSQGDVPDIARAIEAMVAAMAQQGAAMMQQHEASMQRQA
Ga0099822_10822602	3300006943	Root Nodules	MAPPRRASQSSQGDTPDIARAIEAMVAAMTQQSAAMMQQHEASMQRQAASFEQ
Ga0099822_11114681	3300006943	Root Nodules	MAPPRRTPQSSEGDVPDITRVIEAMVATIMQQSTAMMHQHEASVQRQAASLE
Ga0099822_11142211	3300006943	Root Nodules	MCQRTMAPPRRTSQSSQGDTSDIARAMEAMVAAMTQQSAVMMQQHEASMQRQAAS
Ga0099823_10126047	3300006944	Root Nodules	MTPSRRTPQSSQGNVPDIARAIEAMVAAMTQQSTTMMQQHKASMQGQATALEQQQLVM*
Ga0099823_101451412	3300006944	Root Nodules	MAPSRRTPQSSQGDVPDIARAIEAMVAAMTQQSTTMMQ*
Ga0099823_10221112	3300006944	Root Nodules	MAPHRRTSQSSHGDAPDIARAIKAMVAVMTQQSTTMMQQHEASMQRQATSLEQ*
Ga0099823_10466642	3300006944	Root Nodules	MAPQRTSQGDAPDIIRAIEAMVAAMTQQSTSMMQQHEASMQ*
Ga0099823_10570221	3300006944	Root Nodules	VCQWTMAPPRRTSQSSQGDVPDIARAIEAMVATMAQQSAAMMQQHEASM*
Ga0099823_10574975	3300006944	Root Nodules	VCQWTMAPPRRASQSSQGDAPDIARAMEAMVAAMAQQSAAMMQQHEASMQQ*
Ga0099823_10778361	3300006944	Root Nodules	MAPQHRNFQPSQGDAPDIARAIEAMVAAMAQQSTTMMQ*
Ga0099823_11038942	3300006944	Root Nodules	MAPPRRTPQSSQGDVPDIARAIEAMVAAMAQQGAAMMQQHEASMQRQAASL
Ga0099823_11118391	3300006944	Root Nodules	MAPPRRTSQSSQGDAPDIARAIEAMVAPMAQQSAAMMQQHEASMQRQAASLEQ*
Ga0099823_11339633	3300006944	Root Nodules	RTQQFSPGNVPDISRAIEAMVSAMTQQSTTMMQQHEASMQ*
Ga0214544_10000913	3300021320	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVAAMTQQSRAMMQQHETSM
Ga0214544_100017249	3300021320	Root Nodules	MVPHRRTSQSSQGDAPDIARAIEAMVTAITQQSTAMMQQHEASMQRQAVSLEQE
Ga0214544_100022123	3300021320	Root Nodules	MAPPCRTPQSSQGDVPDIAMKIEAMVAAMMQQSTTMMQQHEASMQRQAASLELQ
Ga0214544_100024113	3300021320	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVGAMAQQSAAMMQQHEASMQR
Ga0214544_100031354	3300021320	Root Nodules	MAPHRRNTQSSQGDAPDIARAIKAMVAAMTQQSTAMMQQHEASMQRQAASLEQQLFCNAINGSC
Ga0214544_100034519	3300021320	Root Nodules	MTPPRRTSQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHEASMQ
Ga0214544_100057460	3300021320	Root Nodules	MAPSRRTPQSSQGDVRGIDRAIEAMVAAMTQQSTTMMQHHEALMQRQAGRLSNNS
Ga0214544_100121729	3300021320	Root Nodules	MAPHRRTSQCSQGDAPDIARALEVMVVVMTQQSTAMMQQ
Ga0214544_100161734	3300021320	Root Nodules	MAPPHKTQQSSQGDVPNIARAIEAMVAAMTQQSTTMM
Ga0214544_100193733	3300021320	Root Nodules	MAPPRRASQSSQGDVPDIARAIETMVAAMAQQSAAMMQQHEASMQR
Ga0214544_100240518	3300021320	Root Nodules	MTPQRRNSQPSQDDAPDIARAIEAMVAAMAQQSTVMMQQHEASMQRQAASLEQ
Ga0214544_100251629	3300021320	Root Nodules	MAPPRRNSQSSQGDVPDIARAIEALMAAMTQHSTTMMQQHEASMQRHVASLE
Ga0214544_100259022	3300021320	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVAAMAQQSAAMMQQHEASMQR
Ga0214544_10032801	3300021320	Root Nodules	MAPHRRTSQSSHGDAPDIARAIKAMVAVMTQQSTTMMQQHEASMQRQATSLEQ
Ga0214544_10036638	3300021320	Root Nodules	MAPSRRTPQSSQGDVPDIARAIEAMVAAMTQQSTTMMQ
Ga0214544_10040451	3300021320	Root Nodules	MAPPRRTSQVSQGDVPDIARAIETLVVAMTQQSTAMMQ
Ga0214544_100449210	3300021320	Root Nodules	MAPPRRTSQSSQGDAPDIAKAIEEMVAAMAQQSVTMM
Ga0214544_10049756	3300021320	Root Nodules	MVFYVPVIMAPPRRDSQSSQGDVPDIARAIEAMVATMTQQSTVMMQQHEA
Ga0214544_100523125	3300021320	Root Nodules	MAPPCRTSQSSQGDVPDIARAIEAMVTAMTQQSTAMMQQHETSMQR
Ga0214544_100528915	3300021320	Root Nodules	VTPHRRTSQFSQGDAPDIARAIEAMVAAMTQQNMAMM
Ga0214544_100541915	3300021320	Root Nodules	MAPHRRNAQSSQGDAPDIARAIEAMVATMAQQSTAMMQQHEASMQRQAVSLE
Ga0214544_100580711	3300021320	Root Nodules	MAPSRRTPQSSQGDVPDIAKAIEVMVAAMTQQSTTMMQ
Ga0214544_100606015	3300021320	Root Nodules	MAPPRKTPQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHEASMQRQAASLEQQ
Ga0214544_100609113	3300021320	Root Nodules	MAPSRRTLQSSQGDVSNIARAIEAMVAAMTQQSTVMMQQHEASMQR
Ga0214544_10061003	3300021320	Root Nodules	MAPSRRTPQSSQGDVPDIARAIEAMVAAMTQQSTAMMQQHEASMQR
Ga0214544_100617019	3300021320	Root Nodules	MAPHHRTSQSSQGDAPDIARAIEAMVAAMIQQSTTMMQQHEASM
Ga0214544_10062631	3300021320	Root Nodules	MAPRHRASQSSQGDAPYIARAIKAMVAAMAQQSAAMMQQHEASMQ
Ga0214544_100684513	3300021320	Root Nodules	MARYRRTPQSSQGDVPDIARAIEAMVAAMTQQSTTMMQQHEASMQR
Ga0214544_10072547	3300021320	Root Nodules	MAPPCRDTQPSQDDVPDIARAIEAMVAAMTQQSMAMMQQHEASM
Ga0214544_100757813	3300021320	Root Nodules	MAPPRRASQSSQGDAPDIARAMEAMVAAMAQQSAAMMQQHEASMQQ
Ga0214544_100779811	3300021320	Root Nodules	MCQWTMAPPRRTSQSSQGDAPDIARAIEAMVATMAQQSAAMMQQHEASMQRQAASLEQQ
Ga0214544_10086588	3300021320	Root Nodules	MVFFSVCQSIMAPHRRTSQSSQGDVPNIARAIEAMVAAMTQQSTTMIQQHEASMQRQVAS
Ga0214544_10089824	3300021320	Root Nodules	MAPLRRTFQPSQGDVPDIAKAIEAMVAAMTQQSMTMMQ
Ga0214544_10091262	3300021320	Root Nodules	MAPPRRASQSSQGDAPDIARAIEVMVAAMAQQSAAMMQQYETSMQRQTASLE
Ga0214544_10093235	3300021320	Root Nodules	MAPPCRTSQSSQGDVPDIARAIETMVETMTQQSTAMIQQHEALMQR
Ga0214544_10106265	3300021320	Root Nodules	MVFCVPVTMTPPCRTPQSSHYDVQDIAREIEAMVAAMTQQSTVIMQQHEASMQRQAPSLE
Ga0214544_101270417	3300021320	Root Nodules	MAPPCKTSQSSQGDEPDIARAIEAMVAAMTQQSTVMMQQHEDSMQQQAASLK
Ga0214544_10133691	3300021320	Root Nodules	MAPPRRTSQLSQGDVPDIAKAIEAMVAAMTQQSTAMMQQHKASMQRQTTSLEQ
Ga0214544_10134585	3300021320	Root Nodules	MAPHRRTSQSSQGDAHDIARAIKAMVAAMTEQSMAMMQQHEASMQ
Ga0214544_101374510	3300021320	Root Nodules	MAPQRTSQGDAPDIIRAIEAMVAAMTQQSTSMMQQHEASMQ
Ga0214544_10152804	3300021320	Root Nodules	MAPSRRTLQPSQGDVSDIARAIEAMVAAMTQQSTAMMQQHEASMQR
Ga0214544_10154544	3300021320	Root Nodules	MAPHRRNAQSSQGDAPDIARAIEAMVAAMAQQSTAMMQQHEASM
Ga0214544_10155359	3300021320	Root Nodules	MAPPRRTPQSSEGDVPDITRVIEAMVATIMQQSTAMMHQHEASVQRQAASLEQQQMVM
Ga0214544_10158124	3300021320	Root Nodules	MAPHRRTSQSSQGDAPDIARAIEAMVAAMTQQSTAMMQQHEASIQR
Ga0214544_10159171	3300021320	Root Nodules	MAPHRKNSQSSQGDAPDIARAIEAMVAAMTQQSMAMMQ
Ga0214544_10182249	3300021320	Root Nodules	MALPRRASQSSQGDTPDIARAIEAMVAAMAQQSTAMMQHHEASMQRQAASLEQ
Ga0214544_10183622	3300021320	Root Nodules	MTPHRRNSQSSQGDVIDITKAIEAMVAAMTQQSMTMMQQHEASMQRHTASLEQQQLVM
Ga0214544_10196062	3300021320	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVATMAQQSAAMMQQHEASM
Ga0214544_10199641	3300021320	Root Nodules	MGPHRKTSQSSQGDAPDIGKAIEEMLAAMTQESTTMMQQYEASMQRQAALLK
Ga0214544_10205524	3300021320	Root Nodules	MAPSHRIPQSSQGDVQDIARAIEAMVAAMTHQSTVMMQQHEASMQ
Ga0214544_10234201	3300021320	Root Nodules	MAPPRTTSQSSQGDVPDIAKAIEAIVAAMTQQSTAMMQ
Ga0214544_10242411	3300021320	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVAAMTQQSAAMMQQHEASMQRQAASLE
Ga0214544_10301192	3300021320	Root Nodules	MAPSRRTPQSSQGDLLDIARAIEAIVATMTQQSTTMMQQHEASMQRRAATIEQQQLVM
Ga0214544_10343041	3300021320	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVAAMAQQSAAMMQQ
Ga0214542_100457112	3300021321	Root Nodules	VIMAPPRRTYQSSQGNVPDIARAIEELVAVMTQQSIAMMQQHGA
Ga0214542_10080743	3300021321	Root Nodules	MAPPRRTSQSSQGDVPDIARAIEAMVATMTQQSKTMMQQHEASMQR
Ga0214542_100835214	3300021321	Root Nodules	MTPPRRTSQSSQGDVPDIARAIEAMVAAMAQQSAAMMQQHGASMQRQATSLEQQ
Ga0214542_10112894	3300021321	Root Nodules	MAPHHRTSQSSQGDVPNIARAIEVMMAAMTQQSTTMMQQHEASM
Ga0214542_10202784	3300021321	Root Nodules	MAPPRRTPQSSQGDVPDIARAIEAMVAAMAQQGAAMMQQHEASMQRQAASLE
Ga0214542_10205473	3300021321	Root Nodules	MASPRRTSQSSQGDVPDIARAIEAMVAAMTQQSAAMMQQHEASMQRQAVSLEQQ
Ga0214545_100025411	3300021324	Root Nodules	MAPHRRTSQSSQGDVPNIARAIEAMVAAMTQQSTTMIQQHEASMQRQVASL
Ga0214545_101167312	3300021324	Root Nodules	MTPPCRTPQSSHYDVQDIAREIEAMVAAMTQQSTVIMQQHEASMQRQAPSLEQ
Ga0214543_100348321	3300021327	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVAAMAQQSAAMMQQHEAS
Ga0214543_10159953	3300021327	Root Nodules	MAPPRRTPQSSQGDVPNIARAIEAMVAAMAQQSAAMMQQHEASMQRQAASLEQ
Ga0214543_10386133	3300021327	Root Nodules	MAPPRRTSQSSQGDLPDIARAIEAMVAAMTQQSTAIMQQHEAAMQRQAVSLEQQ
Ga0214543_10499331	3300021327	Root Nodules	MAPPRRTPQSSQGDVPDIARAIEAMVAAMAQQGAAMMQQHEASMQRQAA
Ga0214543_10637732	3300021327	Root Nodules	MCQWTMAPPRRTSQSSQGDVPDIARAIEAMVAAMTQQSAAMMQQ
Ga0209389_10115205	3300027296	Root Nodules	MVFSMPMTMAPPRRTSQSSLGDVPDIARAIEAMVAAMTQQSTTMMQQHEASIQR
Ga0209389_10696502	3300027296	Root Nodules	MAPPRRASKSSQGDAPDIARAIEAMVAAMTQQSAAMMQQHEASMQR
Ga0209389_11008311	3300027296	Root Nodules	MAPPRRASQSSQGDAPDIARAIEAMVAAMAQQSAA
Ga0209589_10003175	3300027357	Root Nodules	MAPSRRTPQSSQGDVPDIVRTIEAMVAAMTQQSTAMMQQHEASMQ
Ga0209589_10261894	3300027357	Root Nodules	QSSQGDVPDIARAIEAMVAAMAQQGAAMMQQHEASMQRQAASLE
Ga0209589_10382272	3300027357	Root Nodules	MCQWTMASPRRTSQSSQGDVPDIARAIEAMVAAMTQQSAAMMQQHEASMQRQAVSLEQQ