Metagenome Family F064325

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064325
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	45 residues
Representative Sequence	MATAAPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSS
Number of Associated Samples	78
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.44 %
% of genes near scaffold ends (potentially truncated)	92.97 %
% of genes from short scaffolds (< 2000 bps)	75.78 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.875 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (49.219 % of family members)
Environment Ontology (ENVO)	Unclassified (89.062 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.219 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.94% β-sheet: 0.00% Coil/Unstructured: 72.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00004	AAA	12.50
PF00072	Response_reg	5.47
PF13701	DDE_Tnp_1_4	4.69
PF13414	TPR_11	4.69
PF08450	SGL	3.12
PF13432	TPR_16	2.34
PF13353	Fer4_12	2.34
PF06868	DUF1257	2.34
PF07238	PilZ	1.56
PF08241	Methyltransf_11	1.56
PF01381	HTH_3	1.56
PF05717	TnpB_IS66	1.56
PF04471	Mrr_cat	1.56
PF13817	DDE_Tnp_IS66_C	0.78
PF13495	Phage_int_SAM_4	0.78
PF10518	TAT_signal	0.78
PF07040	DUF1326	0.78
PF01545	Cation_efflux	0.78
PF14236	DUF4338	0.78
PF01432	Peptidase_M3	0.78
PF07883	Cupin_2	0.78
PF13487	HD_5	0.78
PF01208	URO-D	0.78
PF13229	Beta_helix	0.78
PF02517	Rce1-like	0.78
PF07592	DDE_Tnp_ISAZ013	0.78
PF00665	rve	0.78
PF08357	SEFIR	0.78
PF13426	PAS_9	0.78
PF02065	Melibiase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	3.12
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	3.12
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.56
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.78
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.78
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.78
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.78
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.78
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	0.78
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.78
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.78
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.78
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.78
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.78
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.78
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.66 %
Unclassified	root	N/A	2.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.88 %
Unclassified	root	N/A	2.34 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.16 %
Unclassified	root	N/A	2.34 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.16 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	7.81 %
Unclassified	root	N/A	2.34 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	7.81 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	2.34 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	2.34 %
Unclassified	root	N/A	2.34 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	7.81 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	3.12 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.34 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	2.34 %
Unclassified	root	N/A	2.34 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	7.81 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	3.12 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.34 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	2.34 %
Unclassified	root	N/A	2.34 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.25 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	7.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3.12 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2.34 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	2.34 %
Unclassified	root	N/A	2.34 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100397081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300009518\|Ga0116128_1070576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1068	Open in IMG/M
3300009547\|Ga0116136_1033663	All Organisms → cellular organisms → Bacteria → Acidobacteria	1541	Open in IMG/M
3300009548\|Ga0116107_1008681	All Organisms → cellular organisms → Bacteria	4447	Open in IMG/M
3300009549\|Ga0116137_1024917	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300009615\|Ga0116103_1014272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2627	Open in IMG/M
3300009615\|Ga0116103_1020485	All Organisms → cellular organisms → Bacteria → Acidobacteria	2111	Open in IMG/M
3300009616\|Ga0116111_1027113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1894	Open in IMG/M
3300009616\|Ga0116111_1120700	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300009617\|Ga0116123_1020450	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300009617\|Ga0116123_1078910	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300009617\|Ga0116123_1088208	Not Available	836	Open in IMG/M
3300009618\|Ga0116127_1091482	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009636\|Ga0116112_1178960	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300009637\|Ga0116118_1118574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	876	Open in IMG/M
3300009637\|Ga0116118_1122766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300009645\|Ga0116106_1118864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300009646\|Ga0116132_1069967	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300009646\|Ga0116132_1202782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300009760\|Ga0116131_1200468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009762\|Ga0116130_1092083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300009824\|Ga0116219_10126363	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300010341\|Ga0074045_10872240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300014155\|Ga0181524_10521996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300014159\|Ga0181530_10278763	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300014159\|Ga0181530_10615870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300014162\|Ga0181538_10552556	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300014490\|Ga0182010_10671210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	582	Open in IMG/M
3300014491\|Ga0182014_10211220	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300014494\|Ga0182017_10130828	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300014494\|Ga0182017_10504521	Not Available	741	Open in IMG/M
3300014502\|Ga0182021_13124392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	553	Open in IMG/M
3300014839\|Ga0182027_11419764	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300014839\|Ga0182027_11700148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300017925\|Ga0187856_1028277	All Organisms → cellular organisms → Bacteria → Acidobacteria	2713	Open in IMG/M
3300017929\|Ga0187849_1117987	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300017929\|Ga0187849_1153935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300017929\|Ga0187849_1301043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	600	Open in IMG/M
3300017931\|Ga0187877_1013146	All Organisms → cellular organisms → Bacteria	4925	Open in IMG/M
3300017931\|Ga0187877_1241814	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300017931\|Ga0187877_1368411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300017935\|Ga0187848_10007291	All Organisms → cellular organisms → Bacteria	6897	Open in IMG/M
3300017935\|Ga0187848_10452843	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	526	Open in IMG/M
3300017938\|Ga0187854_10045808	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300017938\|Ga0187854_10067412	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300017938\|Ga0187854_10284727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300017940\|Ga0187853_10135648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1188	Open in IMG/M
3300017941\|Ga0187850_10028046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3106	Open in IMG/M
3300017941\|Ga0187850_10049091	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300017941\|Ga0187850_10050900	All Organisms → cellular organisms → Bacteria → Acidobacteria	2140	Open in IMG/M
3300017941\|Ga0187850_10068641	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300017941\|Ga0187850_10080789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1606	Open in IMG/M
3300017941\|Ga0187850_10087759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1528	Open in IMG/M
3300017941\|Ga0187850_10144869	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300017942\|Ga0187808_10118698	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300017943\|Ga0187819_10279081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	974	Open in IMG/M
3300017955\|Ga0187817_10361958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300017996\|Ga0187891_1011249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4701	Open in IMG/M
3300017996\|Ga0187891_1117826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300017998\|Ga0187870_1044376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1945	Open in IMG/M
3300017998\|Ga0187870_1312319	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300018002\|Ga0187868_1172727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300018003\|Ga0187876_1209932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	650	Open in IMG/M
3300018004\|Ga0187865_1214828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300018005\|Ga0187878_1016313	All Organisms → cellular organisms → Bacteria	4107	Open in IMG/M
3300018005\|Ga0187878_1065959	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300018008\|Ga0187888_1057768	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300018009\|Ga0187884_10122875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300018009\|Ga0187884_10377536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300018009\|Ga0187884_10379448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300018013\|Ga0187873_1026449	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300018013\|Ga0187873_1144599	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	911	Open in IMG/M
3300018014\|Ga0187860_1124374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1137	Open in IMG/M
3300018015\|Ga0187866_1014086	All Organisms → cellular organisms → Bacteria	4350	Open in IMG/M
3300018015\|Ga0187866_1015540	All Organisms → cellular organisms → Bacteria	4074	Open in IMG/M
3300018016\|Ga0187880_1354458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300018018\|Ga0187886_1173898	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300018019\|Ga0187874_10053591	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300018019\|Ga0187874_10165876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	928	Open in IMG/M
3300018020\|Ga0187861_10097105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	1427	Open in IMG/M
3300018020\|Ga0187861_10306100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300018021\|Ga0187882_1084360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1390	Open in IMG/M
3300018021\|Ga0187882_1085125	All Organisms → cellular organisms → Archaea	1382	Open in IMG/M
3300018021\|Ga0187882_1232539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300018021\|Ga0187882_1340892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	571	Open in IMG/M
3300018023\|Ga0187889_10009103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	6935	Open in IMG/M
3300018023\|Ga0187889_10022926	All Organisms → cellular organisms → Bacteria → Acidobacteria	3701	Open in IMG/M
3300018023\|Ga0187889_10060224	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300018023\|Ga0187889_10232550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300018023\|Ga0187889_10442791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300018024\|Ga0187881_10171693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300018024\|Ga0187881_10283990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300018025\|Ga0187885_10049753	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300018025\|Ga0187885_10431199	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300018026\|Ga0187857_10276442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300018033\|Ga0187867_10786600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018057\|Ga0187858_10084820	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300018062\|Ga0187784_10835657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	734	Open in IMG/M
3300019082\|Ga0187852_1049273	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300019082\|Ga0187852_1065230	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300019082\|Ga0187852_1177812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	888	Open in IMG/M
3300023075\|Ga0224520_1133701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300023090\|Ga0224558_1108365	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300023232\|Ga0224516_1003686	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300025419\|Ga0208036_1004357	All Organisms → cellular organisms → Bacteria → Acidobacteria	4073	Open in IMG/M
3300025419\|Ga0208036_1015330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1668	Open in IMG/M
3300025448\|Ga0208037_1028811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300025448\|Ga0208037_1069529	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300025460\|Ga0208562_1108453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300025469\|Ga0208687_1116768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300025480\|Ga0208688_1043583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300025812\|Ga0208457_1041983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	996	Open in IMG/M
3300027854\|Ga0209517_10242424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1084	Open in IMG/M
3300029817\|Ga0247275_1079579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300030659\|Ga0316363_10038529	All Organisms → cellular organisms → Bacteria → Acidobacteria	2371	Open in IMG/M
3300030706\|Ga0310039_10041858	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300032160\|Ga0311301_10187996	All Organisms → cellular organisms → Bacteria → Acidobacteria	3584	Open in IMG/M
3300032805\|Ga0335078_10410810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1773	Open in IMG/M
3300033402\|Ga0326728_10005453	All Organisms → cellular organisms → Bacteria	35666	Open in IMG/M
3300033402\|Ga0326728_10029953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9288	Open in IMG/M
3300033402\|Ga0326728_10070875	All Organisms → cellular organisms → Bacteria	4631	Open in IMG/M
3300033402\|Ga0326728_10203073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1992	Open in IMG/M
3300033402\|Ga0326728_10953366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	601	Open in IMG/M
3300033405\|Ga0326727_10031855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9304	Open in IMG/M
3300033405\|Ga0326727_10908704	Not Available	658	Open in IMG/M
3300033405\|Ga0326727_11064649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300033755\|Ga0371489_0298164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	779	Open in IMG/M
3300033977\|Ga0314861_0011373	All Organisms → cellular organisms → Bacteria	6289	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	77.34%
Terrestrial	Environmental → Terrestrial	22.66%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	77.34%
Soil	Environmental → Terrestrial → Soil	13.28%
Peat	Environmental → Terrestrial → Peat	9.38%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	77.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.69%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	53.12%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	21.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	49.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	21.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.03%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1003970811	3300004152	Bog Forest Soil	MATAVSTLHINEPGADLARKTVFIKLHLGLLGNSRKVSSSQ
Ga0116128_10705761	3300009518	Peatland	MATSTAVPILNAQSPDNELAKQTVFIKLHLGLLGNSRKVSSSQVEVDADKAL
Ga0116136_10336631	3300009547	Peatland	MATAAPILNVQSSGNELAQQTVFIKLHLGLLGNSRKVSSSR
Ga0116107_10086811	3300009548	Peatland	MATALPILEIQEAGADLARKTVFIKLHLGLLGNSRKVSSSVSVR*
Ga0116137_10249174	3300009549	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSR
Ga0116103_10142721	3300009615	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNTRKVSS
Ga0116103_10204851	3300009615	Peatland	MATAAPILNVQSSGNELAQQTVFIKLHLGLLGNSRKVSSSRVEVDADKALIRV
Ga0116111_10271134	3300009616	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSK
Ga0116111_11207002	3300009616	Peatland	MATAMPILNVQSSDNELAKQTVFIKLHLGLLGNTRKVS
Ga0116123_10204501	3300009617	Peatland	MATTLPILDIQEPGTDLARKTVFIKLHLGLLSNSRKVSSSQVE
Ga0116123_10789102	3300009617	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSRVEVDAD
Ga0116123_10882082	3300009617	Peatland	MATAVPILNVQSSGNELAKQTVFIKLYLGLLGNSR
Ga0116127_10914821	3300009618	Peatland	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRK
Ga0116112_11789601	3300009636	Peatland	MATAAPILNVQSSGNELAQQTVFIKLHLGLLGNSRK
Ga0116118_11185741	3300009637	Peatland	MATATAVPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSSQVAV
Ga0116118_11227662	3300009637	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLRGNSRKVSSSRVEVDA
Ga0116106_11188641	3300009645	Peatland	MATALPILDIQEPGADLAGKTVFIKLHLGLLGNSRKV
Ga0116132_10699672	3300009646	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSKTLL
Ga0116132_12027822	3300009646	Peatland	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSR
Ga0116131_12004681	3300009760	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIR
Ga0116130_10920833	3300009762	Peatland	MATALPILDIQEPGTDLARKTVFIKLHLGLLGNSRKVSS
Ga0116219_101263631	3300009824	Peatlands Soil	MATVVPILNIQSSDNELSKQTVFIKLHLGSLGNSRKVSAS
Ga0074045_108722401	3300010341	Bog Forest Soil	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSKTL
Ga0181524_105219962	3300014155	Bog	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNGR
Ga0181530_102787631	3300014159	Bog	MATLLPILDIQEPGTDLARKTVFIKLHLGLLGNSRKV
Ga0181530_106158701	3300014159	Bog	MATAAPILNIQSSDNELSKQTVFIKLHLGSLGNGRKVSSSQIAVDADKVLIR
Ga0181538_105525561	3300014162	Bog	MATTLPILEIQESGADLARKTVFIKLHLGLLGDSRKVSSAQVEV
Ga0182010_106712102	3300014490	Fen	MATALPILDIQEPGTDLAKKTVFIKVHLGLLGNSRKVS
Ga0182014_102112203	3300014491	Bog	MATATAVPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSS
Ga0182017_101308283	3300014494	Fen	MATATAVPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSRVEVDA
Ga0182017_105045212	3300014494	Fen	MATALPTLDIHESGADLARKTVFIKLHLGLLGNTRKVRACA*
Ga0182021_131243921	3300014502	Fen	MATALPILDIQEPGTDLAKKTVFIKIHLGLLGNSRKVSS
Ga0182027_114197641	3300014839	Fen	MATALPILDIQEPGTDLARKIVFIKLHLGLLGNSRKVSSSQVEVDADK
Ga0182027_117001482	3300014839	Fen	MATTLPILDFQEPGTDSARKTVFIKLLPGLVGNSRKVSSSQVEVDADKELIRVA
Ga0187856_10282771	3300017925	Peatland	MATALPILDIQEPGTDLAKKTVFIKVHLGLLGNSRK
Ga0187849_11179871	3300017929	Peatland	MATAAPILNIQSSDNELPKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSKTL
Ga0187849_11539351	3300017929	Peatland	MATAAPILNMQSSDNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADK
Ga0187849_13010432	3300017929	Peatland	MATAAPILNIQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKAL
Ga0187877_10131468	3300017931	Peatland	MATALPILDIQEPGTDLARKTVFIKLHLGLLGNSRKVSSSVSVR
Ga0187877_12418141	3300017931	Peatland	MATATAVPILNVQSSDNELAKQTVFIKVHLGLLGNTRKV
Ga0187877_13684111	3300017931	Peatland	MATALPILDIQGAGADLASKTVFIKLHLGLLGKSGKVSSSHVEVDADNEMIR
Ga0187848_100072911	3300017935	Peatland	MATATAVPILNIQRSDNELAKQTVFIKLHLGLLGNSRKVSSSQV
Ga0187848_104528431	3300017935	Peatland	MARSLLILEIQEPGADLARKTVFIKLHLGLLGNSRKVSS
Ga0187854_100458084	3300017938	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKAL
Ga0187854_100674123	3300017938	Peatland	MATAFPILDIQEPGTDLARKTVFIKLHLGLLGNSRKVSSS
Ga0187854_102847272	3300017938	Peatland	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSK
Ga0187853_101356483	3300017940	Peatland	MATALPILDIQGAGADLASKTVFIKLHLGLLGKSGKVSSSHVEVDADNEMIRVAK
Ga0187850_100280461	3300017941	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNTRKVSSSQVAVDADKALI
Ga0187850_100490911	3300017941	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVA
Ga0187850_100509001	3300017941	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSKT
Ga0187850_100686411	3300017941	Peatland	MATAAPILNIQSSGNELAKQTVFIKLHLGLLGNSRKV
Ga0187850_100807891	3300017941	Peatland	MATAAPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSSRVEVDADKALIRVSKT
Ga0187850_100877591	3300017941	Peatland	MATALPILDIQEPGTDLARKTVFIKLHLGLLGNSRK
Ga0187850_101448692	3300017941	Peatland	MATAAPILNIQSSDNELPKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVS
Ga0187808_101186982	3300017942	Freshwater Sediment	MTTALPILEIEEPGTDLARRTVFIKLHLGLLGNSRKVSSSQVEVDADKELIRV
Ga0187819_102790811	3300017943	Freshwater Sediment	MATALPTVDIQDAGTDLARKTVFIKLHLGLLGNSRKVSSSQ
Ga0187817_103619582	3300017955	Freshwater Sediment	MATAFPILDVQEPGADLARKTVFIKLHLGLLGNSRKV
Ga0187891_10112491	3300017996	Peatland	MATATAVPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVS
Ga0187891_11178261	3300017996	Peatland	MATALPILDIQEPGTDLARKTVFIKLHLGLLGNSRKVSSSQ
Ga0187870_10443764	3300017998	Peatland	MATAAPILNIQNSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALI
Ga0187870_13123191	3300017998	Peatland	MATAAPILNIQSSDNELSKQTVFIKVHLGLLGNTRKVSSSQVEVD
Ga0187868_11727271	3300018002	Peatland	MATAVPILDLQEPGTDLARKTVFIKLHLELLGNCRKVNS
Ga0187876_12099321	3300018003	Peatland	MATATAVPILNVQSSDNELAKQTVFIKLHLGLLGNSRK
Ga0187865_12148281	3300018004	Peatland	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSQVAV
Ga0187878_10163131	3300018005	Peatland	APILDIRSSHNELSKQTVFIKLHLGLLGNSRKVSSSQVVVDADKALIRIR
Ga0187878_10659591	3300018005	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSK
Ga0187888_10577681	3300018008	Peatland	MATAAPILNVQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVA
Ga0187884_101228751	3300018009	Peatland	MATAAPILNIQSSDNELAKQTVFIKLHLGLLGNSRK
Ga0187884_103775361	3300018009	Peatland	MATAAPILIIQSSDNELAKQTVFIKLHLGLLGNSRKVKTSQVAVDADKA
Ga0187884_103794481	3300018009	Peatland	MATALPILDIQEPGADLAGKTVFIKLHLGLLGNSRKVSSSQVEVDADK
Ga0187873_10264492	3300018013	Peatland	MATAAPILNIQSSDNELPKQTVFIKLHLGLLGNSRKVSSSQVAVDAD
Ga0187873_11445992	3300018013	Peatland	MATAAPILNVQSSGNELAQQTVFIKLHLGLLGNSRKVSSSRVEVDA
Ga0187860_11243743	3300018014	Peatland	MATAAPILNVQSSDNELSKQTVFIKLHLGLLGNTRKVSSSRVEVDAD
Ga0187866_10140866	3300018015	Peatland	MATAAPILDIRSSHNELSKQTVFIKLHLGLLGNSRKVSSSQVVVDADKALIRIR
Ga0187866_10155401	3300018015	Peatland	MATAAPILNIQSSGNEIAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVS
Ga0187880_13544581	3300018016	Peatland	MATALPILDIQEAGADLARKTVFIKLHLGLLGNSRKVSSS
Ga0187886_11738982	3300018018	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSRVEVDADKALIRVSKTLL
Ga0187874_100535913	3300018019	Peatland	MATAAPILNIQSSDNELAKQTVFIKVHLGLLGNTRKVSSSQVEVD
Ga0187874_101658763	3300018019	Peatland	MATATAVPILNFQSSDNELAKQTVFIKVHLGLLGNTRKVSPSQV
Ga0187861_100971051	3300018020	Peatland	MATAAPILNIQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKA
Ga0187861_103061001	3300018020	Peatland	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRV
Ga0187882_10843601	3300018021	Peatland	MATATAVPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSS
Ga0187882_10851251	3300018021	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADK
Ga0187882_12325391	3300018021	Peatland	MATAAPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSS
Ga0187882_13408921	3300018021	Peatland	MATAAPILNIQSSGNELAKQTVVIKLHLGLLGNSRKVSSSQVAVDADKALIRV
Ga0187889_100091031	3300018023	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVA
Ga0187889_100229265	3300018023	Peatland	MVTAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSS
Ga0187889_100602242	3300018023	Peatland	MATAAPILNVQSSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDADKALIRVSK
Ga0187889_102325501	3300018023	Peatland	MATATAVPILNVQSSDNELAKQTIFIKLHLGLLGNSRKVSSSRVEVDADKA
Ga0187889_104427911	3300018023	Peatland	MATALPILDIQEPGADLAGKTVFIKLHLGLLGNSRK
Ga0187881_101716931	3300018024	Peatland	MATATPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSSRVEVD
Ga0187881_102839902	3300018024	Peatland	MATALPILDIQERGADLARKTVFIKLHLGLLGNSRKVSSSQVEV
Ga0187885_100497531	3300018025	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKV
Ga0187885_104311991	3300018025	Peatland	MATAAPILNIQSSDNELPKQTVFIKLHLGLLGNSRKVSSSQV
Ga0187857_102764421	3300018026	Peatland	MATAAPILNIQSSDNELAKQTVFIKVHLGLLGNTRKVSSSQ
Ga0187867_107866001	3300018033	Peatland	MATALPILDIQEPGADLARMTVFIKLHLGLLGNSREVSSSLVEVDA
Ga0187858_100848201	3300018057	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDADK
Ga0187784_108356571	3300018062	Tropical Peatland	MATATAVPVPILNVQSSDNELAKQTVFIKVHLGLLGNTRKVSPSQVEVDA
Ga0187852_10492732	3300019082	Peatland	MATAAPILNVQSSDNELSKQTVFIKLHLGLLGNTRKVSSS
Ga0187852_10652301	3300019082	Peatland	MATALPILDIQEPGTDLAKKTVFIKVHLGLLGNSRKV
Ga0187852_11778121	3300019082	Peatland	MATALPILDIQEPGTDLAKKTVFIKVHLGLLGNSRKVSS
Ga0224520_11337011	3300023075	Soil	MATATAAPILNVQSSDNELAKQTVFIKLHLGLLGNTRKVSPSQVEVDA
Ga0224558_11083652	3300023090	Soil	MATATAVPILNVQSSDNELAKQTVFIKLHLGLLGNSRKVSSSRVEVD
Ga0224516_10036863	3300023232	Soil	MATAAPILNVQSSDNELAKQTVFIKLHLGLLGNSRKISSSRVEVDADKALIRVSKTLLD
Ga0208036_10043571	3300025419	Peatland	MATAAPILNIQNSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDAD
Ga0208036_10153301	3300025419	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNTRKVSSSQVA
Ga0208037_10288111	3300025448	Peatland	MATVAPILNNQSSDNELSKQTVFIKLHLGLLGNGRKGQLL
Ga0208037_10695291	3300025448	Peatland	MATAAPILNIQSSDNELSKQTVFIKLHLGLLGNSRKVSSSRVE
Ga0208562_11084531	3300025460	Peatland	MATAAPILNIQNSDNELSKQTVFIKLHLGLLGNSRKVSSSQVAVDA
Ga0208687_11167681	3300025469	Peatland	MATALPILDIQESGADLARKTVFIKLHLGLLGNSRKVSSSVSVR
Ga0208688_10435833	3300025480	Peatland	MATATAVPILNIQSSDNELAKQTVFIKLHLGLLGNSRKVSSSRVEV
Ga0208457_10419831	3300025812	Peatland	MATAVPILNVQSSGNELAKQTVFIKLHLGLLGNSRKVSSSQVAVDAD
Ga0209517_102424241	3300027854	Peatlands Soil	MATALPILDIEEPGADLARKTVFIKLHLGLLGNSRKVS
Ga0247275_10795791	3300029817	Soil	MATALPILDIQGAGADLASKTVFIKLHLGLLGKSGKVSSSHVEVDADNEMIRVAKTS
Ga0316363_100385291	3300030659	Peatlands Soil	MATALPILDIQEPGADLARKTVFIKLHLGLLGNSRKVSSSQ
Ga0310039_100418583	3300030706	Peatlands Soil	MATALPILEIQEPGTDLARKTVFIKLHLGLLGNSRKVS
Ga0311301_101879961	3300032160	Peatlands Soil	MATALPILDIQEPGADQARKTVFIKLHLGLLGNSRKVSSSQVEVDADKELIRVA
Ga0335078_104108101	3300032805	Soil	MATALPALDIQEPGTDLARKTVFIKLHLGLLGNSRKVSSS
Ga0326728_1000545310	3300033402	Peat Soil	MATAAPILNIQSSDNELAKQTVFIKLHLSLLGNSRKVSRRQTAPPRKSIHDK
Ga0326728_1002995313	3300033402	Peat Soil	MATALPILEIQEPGADLARKTVFIKLHLGLLGNSRKV
Ga0326728_100708755	3300033402	Peat Soil	MATAVPILNVQNSENELAEQTVFIKIHLGLLGNTRKVSPSQVEVDAAARRATAGRYG
Ga0326728_102030732	3300033402	Peat Soil	MATALPILDIQELGAHLARKTVFIKLHLGLLGNSRKVSSSQVAEYQS
Ga0326728_109533661	3300033402	Peat Soil	MATATAVPIPILNVQSPDNELAKQTVFIKVHLGLL
Ga0326727_100318551	3300033405	Peat Soil	MATALPILEIQEPGADLARKTVFIKLHLGLLGNSRKVSSSHV
Ga0326727_109087041	3300033405	Peat Soil	MATALPILDLQEPGTDLARKTVFIKLHLGLLGNSRKVSSSQV
Ga0326727_110646491	3300033405	Peat Soil	MATATAVPILNVQSSDNELAKQTVFIKVHLGLLGNTRKVSSSQVEPEFRSWTSILPF
Ga0371489_0298164_3_107	3300033755	Peat Soil	MATAAPILNVQSSENELSKQTVFIKLHLGLLGNSR
Ga0314861_0011373_1160_1288	3300033977	Peatland	MTTATAVPILNVQNSGGELAKQTVFIKLHLGLLGNSHEVSSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences