Metagenome / Metatranscriptome Family F064317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	54 residues
Representative Sequence	MRLLAICWMAGWVIAGIYIAAKKGRSKARAAIEALLLGPFVLLLLSFAKQAKKK
Number of Associated Samples	62
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.98 %
% of genes near scaffold ends (potentially truncated)	22.66 %
% of genes from short scaffolds (< 2000 bps)	73.44 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.219 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (29.688 % of family members)
Environment Ontology (ENVO)	Unclassified (83.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.32% β-sheet: 0.00% Coil/Unstructured: 42.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02826	2-Hacid_dh_C	19.53
PF17189	Glyco_hydro_30C	10.94
PF08533	Glyco_hydro_42C	10.16
PF01694	Rhomboid	7.81
PF00356	LacI	2.34
PF04185	Phosphoesterase	2.34
PF13377	Peripla_BP_3	1.56
PF03169	OPT	1.56
PF00532	Peripla_BP_1	1.56
PF12833	HTH_18	0.78
PF13347	MFS_2	0.78
PF09424	YqeY	0.78
PF13520	AA_permease_2	0.78
PF16499	Melibiase_2	0.78
PF13517	FG-GAP_3	0.78
PF08532	Glyco_hydro_42M	0.78
PF02055	Glyco_hydro_30	0.78
PF17167	Glyco_hydro_36	0.78
PF02837	Glyco_hydro_2_N	0.78
PF13432	TPR_16	0.78
PF00703	Glyco_hydro_2	0.78
PF03743	TrbI	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	10.94
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	7.81
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.34
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	1.56
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	1.56
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.22 %
Unclassified	root	N/A	25.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.22 %
Unclassified	root	N/A	25.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.22 %
Unclassified	root	N/A	25.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.34 %
Unclassified	root	N/A	25.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.59 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.03 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	4.69 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.03 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	4.69 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	4.69 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.91 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.78 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	4.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.91 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.78 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	4.69 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3.91 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.78 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.94 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	4.69 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3.91 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.78 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10029679	All Organisms → cellular organisms → Bacteria	3222	Open in IMG/M
3300000567\|JGI12270J11330_10215333	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300004152\|Ga0062386_100440159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300009519\|Ga0116108_1061260	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	1177	Open in IMG/M
3300009524\|Ga0116225_1109587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1276	Open in IMG/M
3300009524\|Ga0116225_1404482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009547\|Ga0116136_1078747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300009548\|Ga0116107_1095542	Not Available	894	Open in IMG/M
3300009548\|Ga0116107_1188309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009616\|Ga0116111_1131368	Not Available	607	Open in IMG/M
3300009639\|Ga0116122_1162191	Not Available	708	Open in IMG/M
3300009643\|Ga0116110_1005325	All Organisms → cellular organisms → Bacteria	5862	Open in IMG/M
3300009644\|Ga0116121_1038199	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009764\|Ga0116134_1271041	Not Available	584	Open in IMG/M
3300010339\|Ga0074046_10132963	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300010339\|Ga0074046_10274493	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300010343\|Ga0074044_11114787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	516	Open in IMG/M
3300010379\|Ga0136449_100670501	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300014151\|Ga0181539_1049431	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300014151\|Ga0181539_1290930	Not Available	601	Open in IMG/M
3300014152\|Ga0181533_1216787	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300014156\|Ga0181518_10054302	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300014165\|Ga0181523_10562944	Not Available	627	Open in IMG/M
3300017823\|Ga0187818_10315336	Not Available	688	Open in IMG/M
3300017925\|Ga0187856_1130734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300017925\|Ga0187856_1205241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300017929\|Ga0187849_1151912	Not Available	933	Open in IMG/M
3300017934\|Ga0187803_10419318	Not Available	544	Open in IMG/M
3300017934\|Ga0187803_10474581	Not Available	510	Open in IMG/M
3300017935\|Ga0187848_10148505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1034	Open in IMG/M
3300017935\|Ga0187848_10190267	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300017938\|Ga0187854_10289359	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300017941\|Ga0187850_10249921	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300017942\|Ga0187808_10092925	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300017946\|Ga0187879_10053416	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	2376	Open in IMG/M
3300017948\|Ga0187847_10860813	Not Available	515	Open in IMG/M
3300017955\|Ga0187817_10007554	All Organisms → cellular organisms → Bacteria → Acidobacteria	6086	Open in IMG/M
3300017955\|Ga0187817_10785889	Not Available	608	Open in IMG/M
3300017961\|Ga0187778_10152380	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300017970\|Ga0187783_11145696	Not Available	560	Open in IMG/M
3300017972\|Ga0187781_10001769	All Organisms → cellular organisms → Bacteria	16445	Open in IMG/M
3300017972\|Ga0187781_10007774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7824	Open in IMG/M
3300017972\|Ga0187781_10014603	All Organisms → cellular organisms → Bacteria	5550	Open in IMG/M
3300017972\|Ga0187781_10026045	All Organisms → cellular organisms → Bacteria	4048	Open in IMG/M
3300017972\|Ga0187781_10109069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1925	Open in IMG/M
3300017972\|Ga0187781_10294203	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1152	Open in IMG/M
3300017972\|Ga0187781_10689057	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	739	Open in IMG/M
3300017975\|Ga0187782_10063800	All Organisms → cellular organisms → Bacteria → Acidobacteria	2684	Open in IMG/M
3300017975\|Ga0187782_10179285	Not Available	1583	Open in IMG/M
3300017975\|Ga0187782_10242911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1352	Open in IMG/M
3300017975\|Ga0187782_10410886	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300017975\|Ga0187782_10731365	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	764	Open in IMG/M
3300017975\|Ga0187782_11132532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300017975\|Ga0187782_11490692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300017975\|Ga0187782_11510016	Not Available	529	Open in IMG/M
3300017975\|Ga0187782_11544393	Not Available	524	Open in IMG/M
3300017996\|Ga0187891_1156532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300018002\|Ga0187868_1300751	Not Available	530	Open in IMG/M
3300018005\|Ga0187878_1051811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1848	Open in IMG/M
3300018009\|Ga0187884_10078289	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018009\|Ga0187884_10438931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300018016\|Ga0187880_1064159	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300018017\|Ga0187872_10253590	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300018023\|Ga0187889_10194908	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300018030\|Ga0187869_10387117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	667	Open in IMG/M
3300018035\|Ga0187875_10166119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1229	Open in IMG/M
3300018046\|Ga0187851_10806535	Not Available	528	Open in IMG/M
3300018062\|Ga0187784_10016611	All Organisms → cellular organisms → Bacteria	5947	Open in IMG/M
3300018062\|Ga0187784_10346270	Not Available	1204	Open in IMG/M
3300018062\|Ga0187784_10555506	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300018062\|Ga0187784_11078836	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300018085\|Ga0187772_11489298	Not Available	503	Open in IMG/M
3300018086\|Ga0187769_10023188	All Organisms → cellular organisms → Bacteria	4144	Open in IMG/M
3300018086\|Ga0187769_10085905	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	2243	Open in IMG/M
3300018086\|Ga0187769_10165356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1626	Open in IMG/M
3300018086\|Ga0187769_10219264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1411	Open in IMG/M
3300018086\|Ga0187769_10279319	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300018086\|Ga0187769_10658058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300018086\|Ga0187769_10714216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300018088\|Ga0187771_10026448	All Organisms → cellular organisms → Bacteria	4382	Open in IMG/M
3300018088\|Ga0187771_10037529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3722	Open in IMG/M
3300018088\|Ga0187771_10063786	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300018088\|Ga0187771_10122847	All Organisms → cellular organisms → Bacteria → Acidobacteria	2113	Open in IMG/M
3300018088\|Ga0187771_10143431	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300018088\|Ga0187771_11441519	Not Available	584	Open in IMG/M
3300018090\|Ga0187770_11062839	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300018090\|Ga0187770_11265835	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300019082\|Ga0187852_1334392	Not Available	598	Open in IMG/M
3300019264\|Ga0187796_1559462	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300025480\|Ga0208688_1106611	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027854\|Ga0209517_10060141	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300027854\|Ga0209517_10159575	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300032069\|Ga0315282_10002290	All Organisms → cellular organisms → Bacteria	35462	Open in IMG/M
3300032069\|Ga0315282_10350623	Not Available	923	Open in IMG/M
3300032783\|Ga0335079_11763559	Not Available	603	Open in IMG/M
3300032783\|Ga0335079_12324074	Not Available	508	Open in IMG/M
3300032805\|Ga0335078_10043631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6646	Open in IMG/M
3300032805\|Ga0335078_10881343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1078	Open in IMG/M
3300032805\|Ga0335078_12599473	Not Available	519	Open in IMG/M
3300032892\|Ga0335081_10150628	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300032892\|Ga0335081_10365081	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300033134\|Ga0335073_11632596	Not Available	613	Open in IMG/M
3300033402\|Ga0326728_10003804	All Organisms → cellular organisms → Bacteria	45930	Open in IMG/M
3300033402\|Ga0326728_10007414	All Organisms → cellular organisms → Bacteria	28160	Open in IMG/M
3300033402\|Ga0326728_10021048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12327	Open in IMG/M
3300033402\|Ga0326728_10025229	All Organisms → cellular organisms → Bacteria	10665	Open in IMG/M
3300033402\|Ga0326728_10046810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6481	Open in IMG/M
3300033402\|Ga0326728_10430640	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300033402\|Ga0326728_10650377	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300033561\|Ga0371490_1098344	Not Available	778	Open in IMG/M
3300033977\|Ga0314861_0000277	All Organisms → cellular organisms → Bacteria → Acidobacteria	88705	Open in IMG/M
3300033977\|Ga0314861_0000382	All Organisms → cellular organisms → Bacteria	73007	Open in IMG/M
3300033977\|Ga0314861_0007804	All Organisms → cellular organisms → Bacteria	8196	Open in IMG/M
3300033977\|Ga0314861_0014470	All Organisms → cellular organisms → Bacteria	5309	Open in IMG/M
3300033977\|Ga0314861_0016042	All Organisms → cellular organisms → Bacteria → Acidobacteria	4947	Open in IMG/M
3300033977\|Ga0314861_0066090	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300033977\|Ga0314861_0067901	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300033977\|Ga0314861_0115776	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300033977\|Ga0314861_0178253	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300033977\|Ga0314861_0193900	Not Available	965	Open in IMG/M
3300033977\|Ga0314861_0221940	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	883	Open in IMG/M
3300033977\|Ga0314861_0250282	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300033977\|Ga0314861_0441748	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300033977\|Ga0314861_0515982	Not Available	511	Open in IMG/M
3300033977\|Ga0314861_0527089	Not Available	504	Open in IMG/M
3300033982\|Ga0371487_0029541	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.06%
Aquatic	Environmental → Aquatic	35.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Freshwater	Environmental → Aquatic → Freshwater	35.94%
Peat	Environmental → Terrestrial → Peat	7.81%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	50.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.47%
Lake	Environmental → Aquatic → Freshwater → Lake	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	50.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.56%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	29.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.19%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	12.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.34%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100296792	3300000567	Peatlands Soil	MKLLAICWTAGWVVAAILIAARKGRSMARAALEALILGPFVLLLLNLAKQAKKK*
JGI12270J11330_102153332	3300000567	Peatlands Soil	MRLLAICWTAGWVIAGIYIAAKSGRSKARAAVEALLLGPFVLLLLSFAKQAKKK*
Ga0062386_1004401592	3300004152	Bog Forest Soil	MRLLAICWTAGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0116108_10612601	3300009519	Peatland	MKLLAICWTAGWVVAATVIAARKGRSIPRAALEALILGPFVLLLLNFAKQAKKK*
Ga0116225_11095872	3300009524	Peatlands Soil	LLAICWTAGWVVAAILIAARKGRSMARAALEALILGPFVLLLLNLAKQAKKK*
Ga0116225_14044822	3300009524	Peatlands Soil	VQPKEATMRLLAICWTAGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0116136_10787472	3300009547	Peatland	MSLCAICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK*
Ga0116107_10955422	3300009548	Peatland	MRLLAICWMAGWVIAGIYIAGKKGRSKARAAIEALLFGPFVLLLLSFAKQAKKK*
Ga0116107_11883092	3300009548	Peatland	EETTMSLCAICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK*
Ga0116111_11313681	3300009616	Peatland	MRLLAIGWMAGWVVAGVYMAGKKGRSKVRAAVEALLLGPFVLLLLSFAKQAKKSDVVQRGG*
Ga0116122_11621911	3300009639	Peatland	MKLLAICWTAGWVVAATFIAARKGRSIPRAALEALILGPFVLLLLNFAKQAKKK*
Ga0116110_10053252	3300009643	Peatland	MKLLAICWTVGWVVAAIFIAARKGRSVARAALEALVLGPFVLLLLNFAKQAKKK*
Ga0116121_10381992	3300009644	Peatland	MRLLAICWTAGWVVAAIYIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0116134_12710411	3300009764	Peatland	MRLLAICWTAGWVVAAIFMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0074046_101329632	3300010339	Bog Forest Soil	MRLLAICWMAGWVIAGIFIAGRKGRSKSRAAIEALLFGPFVLLLLTFARQLKKK*
Ga0074046_102744931	3300010339	Bog Forest Soil	MRLLAICWTAGWVIAGVYMAARKGRPLARAALEALILGPFVLFLLSFAKQTKKK
Ga0074044_111147872	3300010343	Bog Forest Soil	MRLLAICWTAGWVIAGVYMAARKGRPLARAALEALILGPFVLFLLSFAKQTKKK*
Ga0136449_1006705012	3300010379	Peatlands Soil	ATMRLLAICWTAGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0181539_10494312	3300014151	Bog	VQPEEARMRLLAICWTAGWVVAGIYIAARKGRSMARAAVEALLLGPFVLLLLSFAKQAKKK*
Ga0181539_12909302	3300014151	Bog	MRVLAIGWMAGWVVAGVYMAGKKGRSKVRAAAEALLLGPFVLLLLSFAKQAKKSDVVQRGG*
Ga0181533_12167873	3300014152	Bog	AGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0181518_100543022	3300014156	Bog	MRLLAICWTTGWVVAAIYMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0181523_105629441	3300014165	Bog	TMRLLAICWTAGWVVAAIFMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK*
Ga0187818_103153362	3300017823	Freshwater Sediment	MAHRVLRVKETTMRLLPIFWMAGWVIAGVYLANKKGSSKARAAIEALLFGPVVLLILSFAKQVKKK
Ga0187856_11307341	3300017925	Peatland	MRLLAICWTAGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0187856_12052412	3300017925	Peatland	MSLCAICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK
Ga0187849_11519122	3300017929	Peatland	MRLLAICWMAGWVIAGIYIAGKKGRSKARAAIEALLFGPFVLLLLSFAKQAKKK
Ga0187877_12712473	3300017931	Peatland	MPYGAVHTEETTMSLCAICWMAGWVIAGSYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTK
Ga0187803_104193182	3300017934	Freshwater Sediment	MTRLLAICWMAGWVIAGIYIASKKGRSMTRAAIEALLLGPFVLLLLGFAKQAKKK
Ga0187803_104745811	3300017934	Freshwater Sediment	HSIGIKVLPIEETAMRRLAIGWMAGWVVAGIYMASKNGRSKTRAAIEGLLLGPFVLLILSFAKPAKKK
Ga0187848_101485052	3300017935	Peatland	MKLLAICWTAGWVVAAILIAARKGRSMARAALEALILGPFVLLLLNLAKQAKKK
Ga0187848_101902672	3300017935	Peatland	MKLLAICWTAGWVVAATVIAARKGRSIPRAALEALILGPFVLLLLNFAKQAKKK
Ga0187854_102893592	3300017938	Peatland	MRLLAIGWMAGWVVAGVYMAGKKGRSKVRAAVEALLLGPFVLLLLSFAKQAKKSDVVQRG
Ga0187850_102499212	3300017941	Peatland	MRLLAICWMAGWVIAGIYIAAKKGRSKARAAIEALLLGPFVLLLLSFAKQ
Ga0187808_100929252	3300017942	Freshwater Sediment	MRLLPIFWMAGWVIAGVYLANKKGSSKARAAIEALLFGPVVLLILSFAKQVKKK
Ga0187879_100534162	3300017946	Peatland	EATMKLLAICWTVGWVVAAIFIAARKGRSVARAALEALVLGPFVLLLLNFAKQAKKK
Ga0187847_108608131	3300017948	Peatland	MRLLAICWTAGWVVAAIYIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0187817_100075541	3300017955	Freshwater Sediment	MRLLPIFWMAGWVIAGVYLANKKGSSKAHAAIEALLFGPVVLLILSFAKQIK
Ga0187817_107858892	3300017955	Freshwater Sediment	MRLLLILWTVGWVIAGVYIAEKKGRSKARAAIDALLFGPFVLLLLSFAKQAKKK
Ga0187778_101523802	3300017961	Tropical Peatland	MRLLAIGWMAGWVVAGIYMAGKNGHSKARAAIEALLLGPFILLLLGFAKQAKKK
Ga0187783_111456961	3300017970	Tropical Peatland	MRLLALCWTAGWVVAAIYMAVRKGRSVARAALEALILGPFVLFLFSFAKQAKKKRSW
Ga0187781_100017698	3300017972	Tropical Peatland	MRVLAICWTAGWVIAGILMGARKGRPLARAAIEALILGPFVLLLLSFAKQAKKK
Ga0187781_100077742	3300017972	Tropical Peatland	MRLLTICWIAGWVIAGVYLAKKKGRSKARAAIEALLFGPVVLLILTFAKQVKKR
Ga0187781_100146033	3300017972	Tropical Peatland	MKLLAICWMAGWVIAGVYIADKKGRSKVRAALDGLLFGPLVLLLLSFAKQPKKE
Ga0187781_100260453	3300017972	Tropical Peatland	MKLMAICWTAGWVVAAIVIAARRGRSVTRAALEALILRPFVLLLLHFAKQAKKK
Ga0187781_101090693	3300017972	Tropical Peatland	MKLLAICWMAGWVIAGVYLADKKGHSKVRAALEGLLFGPVVLLLLSFAKQSKKESR
Ga0187781_102942032	3300017972	Tropical Peatland	MSLLAICLTVGWVITAVYIAARQGRSKARAATEALLLGPIGFLLLNYAKQARKK
Ga0187781_106890572	3300017972	Tropical Peatland	TAGWVVAAIFIAARKGRSPARAALEALLLGPFVLLLLNFAKQPKKK
Ga0187782_100638004	3300017975	Tropical Peatland	MKLLAVGWTAGWVLAGIYIAARKGRSLPRAAIEALILGPFVLLLLGFAKPSKKK
Ga0187782_101792851	3300017975	Tropical Peatland	MRLLPIFWMAGWVIAGVYLANKKGTSKTHEAIEALLFGPVVLLILNFAKQAKKK
Ga0187782_102429111	3300017975	Tropical Peatland	MRLLAICWTAGWVVAGIYIAARKGRSMARAAVEALVLGPFVLLLLSFAKPTKKK
Ga0187782_104108862	3300017975	Tropical Peatland	MMRLLAICWMAGWVVAGVYIANKKGRSRVRAALEGLLFGPVVLLLLTFAKQVKKGDVK
Ga0187782_107313652	3300017975	Tropical Peatland	MKLLAIGWTAGWVVAAICIAARKGRSLPRAALEALLLGPFVLLLLNFAKQAKKK
Ga0187782_111325322	3300017975	Tropical Peatland	WMAGWIIAGVYIANKKGRSKARAALEGLLFGPVVLLLLSFAKELKKK
Ga0187782_114906922	3300017975	Tropical Peatland	KFLAICWTAGWVVAAIYIAARKGRSLARAALEALLLGPFVLLVLSFAKQAKKK
Ga0187782_115100162	3300017975	Tropical Peatland	MKLLAICWMAGWVIAAVYVADKKGRSKVRAALEGLLFGPVVLLLLSFAKQSKK
Ga0187782_115443931	3300017975	Tropical Peatland	MKLLPICWMVGWLIAWTCIAAKKGQPLARAAIEALLLGPFVLLLNYARQARKK
Ga0187891_11565322	3300017996	Peatland	MSLFAICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK
Ga0187868_13007511	3300018002	Peatland	MRVLAIGWMAGWVVAGVYMAGKKGRSKVRAAAEALLLGPFVLLLLSFAKQAKKK
Ga0187878_10518111	3300018005	Peatland	MRLLAICWMAGWVIAGIYIAAKKGRSKARAAIEALLLGPFVLLLLSFAKQAKKK
Ga0187884_100782891	3300018009	Peatland	MRLLAICWMAGWVIAGIYVADKKGRSKARAVIDALLFGPFVLLLIFAKQAKKK
Ga0187884_104389311	3300018009	Peatland	AICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK
Ga0187880_10641593	3300018016	Peatland	MKLLAICWTAGWVVAATFIAARKGRSMARAALEGLILGPFVLLLLNFAKQAKKK
Ga0187872_102535901	3300018017	Peatland	EETAMRVLAIGWMAGWVVAGVYMAGKKGRSKVRAAAEALLLGPFVLLLLSFAKQAKKSDVVQRGG
Ga0187889_101949082	3300018023	Peatland	MAGWVVAGVYMAGKKGRSKVRAAVEALLLGPFVLLLLSFAKQAKKSDVVQRGG
Ga0187869_103871171	3300018030	Peatland	MKLLAICWTVGWVVAAIFIAARKGRSVARAALEALVLGPFVLLLLNFAKQAKKK
Ga0187875_101661191	3300018035	Peatland	MRLLAICWTVGWVLAAIFIAARKGRSMARAALEALILGPFVLFLFNFAKQAKKK
Ga0187851_108065351	3300018046	Peatland	GWVVAAIYIAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0187784_100166113	3300018062	Tropical Peatland	MKLLAICWMAGWVIAAVYVADKKGRSKVRAALEGLLFGPVVLLLLSFAKQSKKE
Ga0187784_103462702	3300018062	Tropical Peatland	MRLLAICWMAGWVIAGIYMAGKNGRSKTRAAIEALLFGPFVLLLLSFAKQIKKK
Ga0187784_105555061	3300018062	Tropical Peatland	MRLLAICWTAGWVIAAIFIAARKGRSVARAALEALLFGPLVLLLLNFAKQAKKK
Ga0187784_110788361	3300018062	Tropical Peatland	MRLLAICWVAGWVVAGVYIANKKGHSRVRAALEGLLFGPIVLLLLTFANQVKKK
Ga0187772_114892982	3300018085	Tropical Peatland	MRLLALCWTAGWVVAAIYMAVRKGRSVARAALEALILGPFVLFLFSFAKQAKKK
Ga0187769_100231884	3300018086	Tropical Peatland	MKLLAICWMAGWVIAGVYIADKKGRSKVRAALEGLLFGPLVLLLLSFAKQPKKE
Ga0187769_100859052	3300018086	Tropical Peatland	MRLLPICWIAGWVIAGVYLANKKGRSKARAAIEALLFGPVVLLILTFAKQIKKR
Ga0187769_101653561	3300018086	Tropical Peatland	MRLWAIFWTTAWVIVGTYIAARKGRRLTRAALEALVLGPFVLLLLSFAKSAKKK
Ga0187769_102192642	3300018086	Tropical Peatland	MRLLAICWVAGWVVAGVYIANKKGHSRVRAALEGLLFGPVVLLLLTFAKQVKKK
Ga0187769_102793192	3300018086	Tropical Peatland	MKLLAICWMAGWVIAGVYIADRKGRSKVRAALEGLLFGPLVLLLLSFAKQPKKE
Ga0187769_106580581	3300018086	Tropical Peatland	MAGWVIAGVYIADRKGRSKVRAALEGLLFGPLVLLLLRFAKQPKKE
Ga0187769_107142162	3300018086	Tropical Peatland	ETTMKLLAICWMAGWVIAAVYVADKKGRSKVRAALEGLLFGPVVLLLLSFAKQSKKE
Ga0187771_100264483	3300018088	Tropical Peatland	MKLLAICWMAGWVIAGVYVADKKGHSKVRAALEGLLFGPVVLLLLSFAKQSKKE
Ga0187771_100375293	3300018088	Tropical Peatland	MRLLPICWMAGWVICGVYLANKKGRSKARAAIEALLFGPVVLLILSFAKQAKKK
Ga0187771_100637862	3300018088	Tropical Peatland	MTLLSICWTAVWVIAGIYIAAKNGRSKVRGAVDALLFGPFVLFLAFAKQTKEK
Ga0187771_101228472	3300018088	Tropical Peatland	MRLLAICWMAGWVVAGIYMASKDGRSKTRAAVEALLLGPFVLLLFSFAKQAKKK
Ga0187771_101434313	3300018088	Tropical Peatland	MKLLAICWMAGWVIAGVCIADKKGRSKVRAALEGLLFGPLVLLLLSFAKQAKKE
Ga0187771_114415191	3300018088	Tropical Peatland	MRLLAICWMAGWVVTGILMASRKGRSKTRAAIEALLLGPFVLLLLSFAKQAKKK
Ga0187770_110628392	3300018090	Tropical Peatland	MKFLAICWTAGWVVAAIYIAARKGRSLARAALEALLLGPFVLLVLSFAKQAKKK
Ga0187770_112658351	3300018090	Tropical Peatland	MRLLAICWMAGWVVAGVYIANKKGRSRLHAALEGLLFGPVVLLLLTFAKQVKKK
Ga0187852_13343922	3300019082	Peatland	MKLLAFCWTAGWVVAATVIAARKGRSIPRAALEALILGPFVLLLLNFAKQAKKK
Ga0187796_15594621	3300019264	Peatland	LLPICWMAGWIIWGVYLANKKGRSKARAAIEALLFGPVVLLILSFAKQAKKK
Ga0208688_11066112	3300025480	Peatland	RVVGQKNSITNEEQLKEATMKLLAICWTAGWVVAATVIAARKGRSIPRAALEALILGPFVLLLLNFAKQAKKK
Ga0209517_100601413	3300027854	Peatlands Soil	MRLLAICWTAGWVIAGIYIAAKSGRSKARAAVEALLLGPFVLLLLSFAKQAKKK
Ga0209517_101595752	3300027854	Peatlands Soil	MRLLAICWTAGWVVAAICIAARKGRSLPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0315282_1000229010	3300032069	Sediment	MRLLAIGWMAGWVIAGIYIASKEGRSKARAAIEALLLGPFVLLLLSFAKQAKKK
Ga0315282_103506231	3300032069	Sediment	MRLLAIGWMAGWVIAGIYIAAKKGRSKARAAIEALLLGPFVLLLLSFAKQAKKK
Ga0335079_117635592	3300032783	Soil	MKLLAICWTAGWVVAATVIAARKGRSVARAALEALILGPFVLLLLNFAKQAKKK
Ga0335079_123240741	3300032783	Soil	MKLLAICWTAGWVVAAILMAARKGRSMPRAALEALLLGPFVLLLLNFARQ
Ga0335078_100436312	3300032805	Soil	MKLLAICWTAGWVVAAIFIAARKGRSMPRAALEALLLGPFVLLLLNFAKQGKKK
Ga0335078_108813431	3300032805	Soil	MRLLAICWTAGWVVAAIYMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0335078_125994732	3300032805	Soil	MKLLAICWTAGWVVAAIYMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0335081_101506283	3300032892	Soil	MRLLPIFWMAGWVIAGVYLANKKGSSKAHAAIEALLFGPVVLLILNFAKQVKKK
Ga0335081_103650811	3300032892	Soil	MRLLALCWTAGWVVAAIFIAAREGRPVARAALEALLLGPFVLFLFNFAKQAKKK
Ga0335073_116325961	3300033134	Soil	MRLLAICWTAGWVVAAIFMAARKGRSMPRAALEALILGPFVLFLFNFAKQAKKK
Ga0326728_100038046	3300033402	Peat Soil	MRLLAICWTAGWVVAGVYMAARKGRPLARAAIEALILGPFVLFLLSFAKQTKKK
Ga0326728_1000741411	3300033402	Peat Soil	MRLLAICWTAGWVVAATCIAARKGRSMARAALEALILGPFVLFLFNFAKQAKKK
Ga0326728_100210483	3300033402	Peat Soil	MRLLAICWTAGWVVAGVYVAARKGRPLARAAIEALIFGPFVLLLLSFAKQSKKK
Ga0326728_100252294	3300033402	Peat Soil	MRLLPIFWMAGWVIAGVYLASKKGSSKAHAAIEALLFGPVVLLILSFAKQVKKK
Ga0326728_100468102	3300033402	Peat Soil	MRLLAICWTAGWVVAATYIAARKGRSVARAALEALLLGPFVLLLLNFAKQAKKKQL
Ga0326728_104306402	3300033402	Peat Soil	MRLLAICWTTGWVVAAIYMAARKGRSMPRAALEALLLGPFVLFLFNFAKQAKKK
Ga0326728_106503772	3300033402	Peat Soil	MRLLAICWTAGWVVAGVYVAARKGRPLARAALEALILGPFVLLLLSFAKQAKKK
Ga0326728_107437413	3300033402	Peat Soil	VQWRVTRQKDSIPYEDVHTEETTMSLFAICWMAGWVIAGIYIAHRKGRSKTRGAIDALLFGPFVLLLSFARQTKKK
Ga0371490_10983441	3300033561	Peat Soil	MRLLAICWTAGWVVAAICIAARKGRSMPRAALEALLLGPFVLFLFNFA
Ga0314861_0000277_3979_4143	3300033977	Peatland	MKLLAICWMAGWVVAGVYIADKKGRSKVRAALEGLLFGPLVLLLLSFAKQPKKE
Ga0314861_0000382_31661_31825	3300033977	Peatland	MRLLAIGWMAGWVVAGIYMAGKNGHSKARAAIEALLLGPFILLLLSFAKQVKKK
Ga0314861_0007804_6480_6644	3300033977	Peatland	MKLFAICWMAGWVIAGIYIAGKKGRSKARAAIQALLFGPLVLLLLSFAKQIKKK
Ga0314861_0014470_1196_1381	3300033977	Peatland	LQAEETTMRLLAICWVAGWVVAGVYIANKKGRSKVRAALEGLLFGPVVLLLLTFAKQVKK
Ga0314861_0016042_735_908	3300033977	Peatland	MRVLAICWMVGWVIAGIYIAGKEGRSKARAAIEALLFGPFVLLLSFAKQTKKKKIPT
Ga0314861_0066090_442_582	3300033977	Peatland	MAGWIIAGIYIAGKKGRSRARAAIEAVLFGPFVLLLLSFAKQTKKK
Ga0314861_0067901_1326_1466	3300033977	Peatland	MAGWVIAGIYIAGKKGRSRARAAIEALLFGPFVLLLLSFAKQTKKK
Ga0314861_0115776_196_336	3300033977	Peatland	MAGWVIAAVYVADKKGRSKVRAALEGLLFGPVVLLLLSFAKQSKKE
Ga0314861_0178253_215_400	3300033977	Peatland	LHDEETTMRLLAICWMAGWVVAGIFIAGRKGRSKSRAAIEALLFGPFVLLLLSFARQLKK
Ga0314861_0193900_506_703	3300033977	Peatland	MAYEVLRIEETMLRLLAICWTAGWVIAGIYTAGKKGRSKARAAIDALLFGPLFFLLSFAKQTKKK
Ga0314861_0221940_427_591	3300033977	Peatland	MRLLPICWIAGWVIAGVYLANRKGRSKARAAIEALLFGPVVLLILTFAKQVKKR
Ga0314861_0250282_306_470	3300033977	Peatland	MRLLAICWMAGWVIAGIYIAAKKGRSKTRAAIEALLLGPFILLLLSFAKQAKKK
Ga0314861_0441748_1_144	3300033977	Peatland	MRLLAICWMAGWVIAGVYIANKKGRSRVRAALEGLLFGPVVLLLLTFA
Ga0314861_0515982_278_415	3300033977	Peatland	MAGWVIAGIYIAQRKGRSKTRGALEALLFGPLVLLLSFAKHTKKK
Ga0314861_0527089_38_202	3300033977	Peatland	MRLLAICWTVGWVVAGIYIAARKGSSVARAAFEALLLGPFVLLLLNLAKQPKKK
Ga0371487_0029541_3144_3284	3300033982	Peat Soil	MAGWVIAGVYVADKKGHSKVRAALEGLLFGPVVLLLLSFAKQSKKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences